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2020 – today
- 2023
[j5]Yannik Schälte
, Fabian Fröhlich, Paul J. Jost, Jakob Vanhoefer, Dilan Pathirana, Paul Stapor, Polina A. Lakrisenko, Dantong Wang, Elba Raimúndez-Álvarez, Simon Merkt, Leonard Schmiester, Philipp Städter, Stephan Grein, Erika Dudkin, Domagoj Doresic, Daniel Weindl, Jan Hasenauer:
pyPESTO: a modular and scalable tool for parameter estimation for dynamic models. Bioinform. 39(11) (2023)- 2021
- [j4]Leonard Schmiester, Daniel Weindl, Jan Hasenauer:
Efficient gradient-based parameter estimation for dynamic models using qualitative data. Bioinform. 37(23): 4493-4500 (2021) - [j3]Leonard Schmiester, Yannik Schälte, Frank T. Bergmann, Tacio Camba, Erika Dudkin, Janine Egert, Fabian Fröhlich, Lara Fuhrmann, Adrian L. Hauber, Svenja Kemmer, Polina A. Lakrisenko, Carolin Loos, Simon Merkt, Wolfgang Müller, Dilan Pathirana, Elba Raimúndez-Álvarez, Lukas Refisch, Marcus Rosenblatt, Paul Stapor, Philipp Städter, Dantong Wang, Franz-Georg Wieland, Julio R. Banga, Jens Timmer, Alejandro F. Villaverde, Sven Sahle, Clemens Kreutz, Jan Hasenauer, Daniel Weindl:
PEtab - Interoperable specification of parameter estimation problems in systems biology. PLoS Comput. Biol. 17(1) (2021) - 2020
- [j2]Leonard Schmiester, Yannik Schälte, Fabian Fröhlich, Jan Hasenauer, Daniel Weindl:
Efficient parameterization of large-scale dynamic models based on relative measurements. Bioinform. 36(2): 594-602 (2020)
2010 – 2019
- 2017
- [j1]Leonard Schmiester, Martin Möddel, Wolfgang Erb, Tobias Knopp:
Direct Image Reconstruction of Lissajous-Type Magnetic Particle Imaging Data Using Chebyshev-Based Matrix Compression. IEEE Trans. Computational Imaging 3(4): 671-681 (2017)
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