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ORCIDFabrizio Ferrè
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2010 – 2019
- 2018
[j14]Marco Pietrosanto
, Marta Adinolfi, Riccardo Casula, Gabriele Ausiello, Fabrizio Ferrè, Manuela Helmer-Citterich:
BEAM web server: a tool for structural RNA motif discovery. Bioinform. 34(6): 1058-1060 (2018)- 2016
- [j13]Fabrizio Ferrè, Alessio Colantoni, Manuela Helmer-Citterich:
Revealing protein-lncRNA interaction. Briefings Bioinform. 17(1): 106-116 (2016) - 2015
- [j12]Eugenio Mattei, Marco Pietrosanto, Fabrizio Ferrè, Manuela Helmer-Citterich:
Web-Beagle: a web server for the alignment of RNA secondary structures. Nucleic Acids Res. 43(Webserver-Issue): W493-W497 (2015) - 2013
- [j11]Valerio Bianchi, Alessio Colantoni, Alberto Calderone, Gabriele Ausiello, Fabrizio Ferrè, Manuela Helmer-Citterich:
DBATE: database of alternative transcripts expression. Database J. Biol. Databases Curation 2013 (2013) - [j10]Luca Parca, Fabrizio Ferrè, Gabriele Ausiello, Manuela Helmer-Citterich:
Nucleos: a web server for the identification of nucleotide-binding sites in protein structures. Nucleic Acids Res. 41(Webserver-Issue): 281-285 (2013) - [j9]Valerio Bianchi, Iolanda Mangone, Fabrizio Ferrè, Manuela Helmer-Citterich, Gabriele Ausiello:
webPDBinder: a server for the identification of ligand binding sites on protein structures. Nucleic Acids Res. 41(Webserver-Issue): 308-313 (2013)
2000 – 2009
- 2007
- [j8]Fabrizio Ferrè, Yann Ponty, W. A. Lorenz, Peter Clote:
DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities. Nucleic Acids Res. 35(Web-Server-Issue): 659-668 (2007) - 2006
- [j7]Fabrizio Ferrè, Peter Clote:
DiANNA 1.1: an extension of the DiANNA web server for ternary cysteine classification. Nucleic Acids Res. 34(Web-Server-Issue): 182-185 (2006) - [j6]Fabrizio Ferrè, Peter Clote:
BTW: a web server for Boltzmann time warping of gene expression time series. Nucleic Acids Res. 34(Web-Server-Issue): 482-485 (2006) - 2005
- [j5]Fabrizio Ferrè, Peter Clote:
Disulfide connectivity prediction using secondary structure information and diresidue frequencies. Bioinform. 21(10): 2336-2346 (2005) - [j4]Fabrizio Ferrè, Gabriele Ausiello, Andreas Zanzoni, Manuela Helmer-Citterich:
Functional annotation by identification of local surface similarities: a novel tool for structural genomics. BMC Bioinform. 6: 194 (2005) - [j3]Fabrizio Ferrè, Peter Clote:
DiANNA: a web server for disulfide connectivity prediction. Nucleic Acids Res. 33(Web-Server-Issue): 230-232 (2005) - 2004
- [j2]Fabrizio Ferrè, Gabriele Ausiello, Andreas Zanzoni, Manuela Helmer-Citterich:
SURFACE: a database of protein surface regions for functional annotation. Nucleic Acids Res. 32(Database-Issue): 240-244 (2004) - 2003
- [j1]Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson:
ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Res. 31(13): 3625-3630 (2003)
Coauthor Index
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