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ORCIDKevin Karplus
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2010 – 2019
- 2015
[j20]Jacob Schreiber, Kevin Karplus:
Analysis of nanopore data using hidden Markov models. Bioinform. 31(12): 1897-1903 (2015)- 2011
- [j19]Josue Samayoa, Fitnat H. Yildiz, Kevin Karplus:
Identification of prokaryotic small proteins using a comparative genomic approach. Bioinform. 27(13): 1765-1771 (2011) - [c12]Rasmus Fonseca
, Pawel Winter, Kevin Karplus:
Protein Packing Quality Using Delaunay Complexes. ISVD 2011: 117-122 - 2010
- [j18]Martin Madera, Ryan Calmus, Grant Thiltgen, Kevin Karplus, Julian Gough:
Improving protein secondary structure prediction using a simple k-mer model. Bioinform. 26(5): 596-602 (2010)
2000 – 2009
- 2009
- [j17]Firas Khatib, Carol A. Rohl, Kevin Karplus:
Pokefind: a novel topological filter for use with protein structure prediction. Bioinform. 25(12) (2009) - [j16]Kevin Karplus:
SAM-T08, HMM-based protein structure prediction. Nucleic Acids Res. 37(Web-Server-Issue): 492-497 (2009) - 2008
- [j15]Sol Katzman, Christian Barrett, Grant Thiltgen, Rachel Karchin, Kevin Karplus:
PREDICT-2ND: a tool for generalized protein local structure prediction. Bioinform. 24(21): 2453-2459 (2008) - 2005
- [j14]Kevin Karplus, Rachel Karchin, George Shackelford, Richard Hughey:
Calibrating E-values for hidden Markov models using reverse-sequence null models. Bioinform. 21(22): 4107-4115 (2005) - [j13]Andrea Di Blas, David M. Dahle, Mark Diekhans, Leslie Grate, Jeffrey D. Hirschberg, Kevin Karplus, Hansjörg Keller, Mark Kendrick, Francisco J. Mesa-Martinez, David Pease, Eric Rice, Angela Schultz, Don Speck, Richard Hughey:
The UCSC Kestrel Parallel Processor. IEEE Trans. Parallel Distributed Syst. 16(1): 80-92 (2005) - 2004
- [j12]Todd J. Dolinsky, P. M. J. Burgers, Kevin Karplus, Nathan A. Baker:
SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genome. Bioinform. 20(14): 2312-2314 (2004) - 2002
- [j11]Rachel Karchin, Kevin Karplus, David Haussler:
Classifying G-protein coupled receptors with support vector machines. Bioinform. 18(1): 147-159 (2002) - [j10]Melissa S. Cline, Richard Hughey, Kevin Karplus:
Predicting reliable regions in protein sequence alignments. Bioinform. 18(2): 306-314 (2002) - 2001
- [j9]Kevin Karplus, Birong Hu:
Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set. Bioinform. 17(8): 713-720 (2001) - 2000
- [j8]Chang Zhu, Kevin Karplus, Leslie Grate, Philip Coffino:
A homolog of mammalian antizyme is present in fission yeast Schizosaccharomyces pombe but not detected in budding yeast Saccharomyces cerevisiae. Bioinform. 16(5): 478-481 (2000)
1990 – 1999
- 1998
- [j7]Kevin Karplus, Christian Barrett, Richard Hughey:
Hidden Markov models for detecting remote protein homologies. Bioinform. 14(10): 846-856 (1998) - [j6]Jeffrey D. Hirschberg, David M. Dahle, Kevin Karplus, Don Speck, Richard Hughey:
Kestrel: A Programmable Array for Sequence Analysis. J. VLSI Signal Process. 19(2): 115-126 (1998) - 1997
- [j5]Christian Barrett, Richard Hughey, Kevin Karplus:
Scoring hidden Markov models. Comput. Appl. Biosci. 13(2): 191-199 (1997) - [c11]David M. Dahle, Jeffrey D. Hirschberg, Kevin Karplus, Hansjörg Keller, Eric Rice, Don Speck, Douglas H. Williams, Richard Hughey:
Kestrel: Design of an 8-bit SIMD Parallel Processor. ARVLSI 1997: 145- - [e1]Terry Gaasterland, Peter D. Karp, Kevin Karplus, Christos A. Ouzounis, Chris Sander, Alfonso Valencia:
Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, Halkidiki, Greece, June 21-26, 1997. AAAI 1997, ISBN 1-57735-022-7 [contents] - 1996
- [j4]Kimmen Sjölander, Kevin Karplus, Michael Brown, Richard Hughey, Anders Krogh, I. Saira Mian, David Haussler:
Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology. Comput. Appl. Biosci. 12(4): 327-345 (1996) - [j3]Philipp Bucher, Kevin Karplus, Nicolas Moeri, Kay Hofmann:
A Flexible Motif Search Technique Based on Generalized Profiles. Comput. Chem. 20(1): 3-23 (1996) - [c10]Jeffrey D. Hirschberg, Richard Hughey, Kevin Karplus, Don Speck:
Kestrel: A Programmable Array for Sequence Analysis. ASAP 1996: 25-34 - 1995
- [c9]Kevin Karplus:
Evaluating Regularizers for Estimating Distributions of Amino Acids. ISMB 1995: 188-196 - 1991
- [j2]Kevin Karplus, Habib Krit:
A semi-systolic decoder for the PDSC-73 error-correcting code. Discret. Appl. Math. 33(1-3): 109-128 (1991) - [c8]Kevin Karplus:
Xmap: A Technology Mapper for Table-Lookup Field-Programmable Gate Arrays. DAC 1991: 240-243 - [c7]Kevin Karplus:
Amap: A Technology Mapper for Selector-Based Field-Programmable Gate Arrays. DAC 1991: 244-247 - [c6]Søren Søe, Kevin Karplus:
Logic Minimization using Two-column Rectangle Replacement. DAC 1991: 470-473 - 1990
- [j1]Pak K. Chan, Kevin Karplus:
Computing signal delay in general RC networks by tree/link partitioning. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 9(8): 898-902 (1990)
1980 – 1989
- 1989
- [c5]Pak K. Chan, Kevin Karplus:
Computing Signal Delay in General RC Networks by Tree/Link Partitioning. DAC 1989: 485-490 - 1986
- [c4]Kevin Karplus, Alexandru Nicolau:
Getting High Performance with Slow Memory. COMPCON 1986: 248-253 - [c3]Gary Haggard, Kevin Karplus:
Finding minimal perfect hash functions. SIGCSE 1986: 191-193 - 1985
- [c2]Kevin Karplus, Alexandru Nicolau:
Efficient hardware for multiway jumps and pre-fetches. MICRO 1985: 11-18 - 1983
- [b1]Kevin Karplus:
CHISEL: an extension to the programming language C for VLSI layout. Stanford University, USA, 1983 - 1981
- [c1]Danny Dolev, Kevin Karplus, Alan Siegel, Alex Strong, Jeffrey D. Ullman:
Optimal Wiring between Rectangles. STOC 1981: 312-317
Coauthor Index
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