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ORCIDJeffrey J. Nirschl
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2020 – today
- 2025
[c3]James Burgess, Jeffrey J. Nirschl, Laura Bravo-Sánchez, Alejandro Lozano, Sanket Rajan Gupte, Jesus G. Galaz-Montoya, Yuhui Zhang, Yuchang Su, Disha Bhowmik, Zachary Coman, Sarina M. Hasan, Alexandra Johannesson, William D. Leineweber, Malvika G. Nair, Ridhi Yarlagadda, Connor Zuraski, Wah Chiu, Sarah Cohen, Jan N. Hansen, Manuel D. Leonetti, Chad Liu, Emma Lundberg, Serena Yeung-Levy:
MicroVQA: A Multimodal Reasoning Benchmark for Microscopy-Based Scientific Research. CVPR 2025: 19552-19564- [c2]Alejandro Lozano, Min Woo Sun, James Burgess, Liangyu Chen, Jeffrey J. Nirschl, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Anita Rau, Austin Wolfgang Katzer, Yuhui Zhang, Collin Chiu, Xiaohan Wang, Alfred Seunghoon Song, Robert Tibshirani, Serena Yeung-Levy:
BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature. CVPR 2025: 19724-19735 - [i6]Alejandro Lozano, Min Woo Sun, James Burgess, Liangyu Chen, Jeffrey J. Nirschl, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Austin Wolfgang Katzer, Collin Chiu, Anita Rau, Xiaohan Wang, Yuhui Zhang, Alfred Seunghoon Song, Robert Tibshirani, Serena Yeung-Levy:
BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature. CoRR abs/2501.07171 (2025) - [i5]Yuhui Zhang, Yuchang Su, Chenyu Wang, Tianhong Li, Zoe Wefers, Jeffrey J. Nirschl, James Burgess, Daisy Ding, Alejandro Lozano, Emma Lundberg, Serena Yeung-Levy:
CellFlow: Simulating Cellular Morphology Changes via Flow Matching. CoRR abs/2502.09775 (2025) - [i4]James Burgess, Jeffrey J. Nirschl, Laura Bravo-Sánchez, Alejandro Lozano, Sanket Rajan Gupte, Jesus G. Galaz-Montoya, Yuhui Zhang, Yuchang Su, Disha Bhowmik, Zachary Coman, Sarina M. Hasan, Alexandra Johannesson, William D. Leineweber, Malvika G. Nair, Ridhi Yarlagadda, Connor Zuraski, Wah Chiu, Sarah Cohen, Jan N. Hansen, Manuel D. Leonetti, Chad Liu, Emma Lundberg, Serena Yeung-Levy:
MicroVQA: A Multimodal Reasoning Benchmark for Microscopy-Based Scientific Research. CoRR abs/2503.13399 (2025) - [i3]Alejandro Lozano, Min Woo Sun, James Burgess, Jeffrey J. Nirschl, Christopher Polzak, Yuhui Zhang, Liangyu Chen, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Anita Rau, Austin Wolfgang Katzer, Collin Chiu, Orr Zohar, Xiaohan Wang, Alfred Seunghoon Song, Chia-Chun Chiang, Robert Tibshirani, Serena Yeung-Levy:
A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI. CoRR abs/2503.22727 (2025) - 2024
- [j2]Sanket Rajan Gupte, Josiah Aklilu, Jeffrey J. Nirschl, Serena Yeung-Levy:
Revisiting Active Learning in the Era of Vision Foundation Models. Trans. Mach. Learn. Res. 2024 (2024) - [c1]Alejandro Lozano, Jeffrey J. Nirschl, James Burgess, Sanket Rajan Gupte, Yuhui Zhang, Alyssa Unell, Serena Yeung:
Micro-Bench: A Microscopy Benchmark for Vision-Language Understanding. NeurIPS 2024 - [i2]Sanket Rajan Gupte, Josiah Aklilu, Jeffrey J. Nirschl, Serena Yeung-Levy:
Revisiting Active Learning in the Era of Vision Foundation Models. CoRR abs/2401.14555 (2024) - [i1]Alejandro Lozano, Jeffrey J. Nirschl, James Burgess, Sanket Rajan Gupte, Yuhui Zhang, Alyssa Unell, Serena Yeung-Levy:
μ-Bench: A Vision-Language Benchmark for Microscopy Understanding. CoRR abs/2407.01791 (2024) - 2021
- [j1]Douwe van der Wal
, Iny Jhun, Israa Laklouk, Jeffrey J. Nirschl, Lara Richer, Rebecca Rojansky, Talent Theparee, Joshua Wheeler, Jörg Sander, Felix Y. Feng, Osama Mohamad, Silvio Savarese, Richard Socher, Andre Esteva:
Biological data annotation via a human-augmenting AI-based labeling system. npj Digit. Medicine 4 (2021)
2010 – 2019
- 2017
- [p1]Jeffrey J. Nirschl, Andrew Janowczyk, Eliot G. Peyster, Renee Frank, Kenneth B. Margulies, Michael D. Feldman, Anant Madabhushi:
Deep Learning Tissue Segmentation in Cardiac Histopathology Images. Deep Learning for Medical Image Analysis 2017: 179-195
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