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Max W. Shen
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Journal Articles
- 2021
- [j5]Wilson Louie, Max W. Shen, Zakir Tahiry, Sophia Zhang
, Daniel Worstell
, Christopher A. Cassa
, Richard I. Sherwood
, David K. Gifford
:
Machine learning based CRISPR gRNA design for therapeutic exon skipping. PLoS Comput. Biol. 17(1) (2021) - [j4]Grace Hui Ting Yeo
, Oscar Juez
, Qing Chen, Budhaditya Banerjee, Lendy Chu, Max W. Shen, May Sabry, Ive Logister, Richard I. Sherwood
, David K. Gifford
:
Detection of gene cis-regulatory element perturbations in single-cell transcriptomes. PLoS Comput. Biol. 17(3) (2021) - 2018
- [j3]Max W. Shen, Mandana Arbab, Jonathan Y. Hsu, Daniel Worstell
, Sannie J. Culbertson, Olga Krabbe, Christopher A. Cassa
, David R. Liu, David K. Gifford, Richard I. Sherwood:
Predictable and precise template-free CRISPR editing of pathogenic variants. Nat. 563(7733): 646-651 (2018) - 2016
- [j2]Dmitry Antipov, Nolan Hartwick, Max W. Shen, Mikhail Raiko
, Alla L. Lapidus
, Pavel A. Pevzner:
plasmidSPAdes: assembling plasmids from whole genome sequencing data. Bioinform. 32(22): 3380-3387 (2016) - [j1]Yu Lin
, Jeffrey Yuan
, Mikhail Kolmogorov, Max W. Shen, Mark Chaisson, Pavel A. Pevzner:
Assembly of long error-prone reads using de Bruijn graphs. Proc. Natl. Acad. Sci. USA 113(52): E8396-E8405 (2016)
Conference and Workshop Papers
- 2023
- [c2]Max W. Shen, Emmanuel Bengio, Ehsan Hajiramezanali, Andreas Loukas, Kyunghyun Cho, Tommaso Biancalani:
Towards Understanding and Improving GFlowNet Training. ICML 2023: 30956-30975 - 2016
- [c1]Yu Lin, Max W. Shen, Jeffrey Yuan, Mark Chaisson, Pavel A. Pevzner:
Assembly of Long Error-Prone Reads Using de Bruijn Graphs. RECOMB 2016: 265
Informal and Other Publications
- 2023
- [i3]Max W. Shen, Emmanuel Bengio, Ehsan Hajiramezanali, Andreas Loukas, Kyunghyun Cho, Tommaso Biancalani:
Towards Understanding and Improving GFlowNet Training. CoRR abs/2305.07170 (2023) - 2022
- [i2]Max W. Shen:
Trust in AI: Interpretability is not necessary or sufficient, while black-box interaction is necessary and sufficient. CoRR abs/2202.05302 (2022) - [i1]Max W. Shen, Ehsan Hajiramezanali, Gabriele Scalia, Alex M. Tseng, Nathaniel Diamant, Tommaso Biancalani, Andreas Loukas:
Conditional Diffusion with Less Explicit Guidance via Model Predictive Control. CoRR abs/2210.12192 (2022)
Coauthor Index
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