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ORCIDWei Shao 0008
Person information
- affiliation: University of Florida, Department of Medicine, Gainesville, FL, USA
- affiliation: Stanford University, Department of Radiology, CA, USA
- affiliation (PhD 2019): University of Iowa, Department of Electrical and Computer Engineering, Iowa City, IA, USA
Other persons with the same name
- Wei Shao — disambiguation page
- Wei Shao 0001 — Nanyang Technological University, School of Electrical and Electronic Engineering, Singapore
- Wei Shao 0002 — Google Inc., Kirkland, WA, USA (and 1 more)
- Wei Shao 0003 — PLA University of Science and Technology, College of Communications Engineering, Nanjing, China
- Wei Shao 0004
![[0000-0001-9515-7091]](https://dblp.dagstuhl.de/img/orcid-mark.12x12.png "0000-0001-9515-7091")
— University of Electronic Science and Technology of China, School of Physical Electronics, Chengdu, China - Wei Shao 0005 — Nanjing University of Aeronautics and Astronautics, School of Computer Science and Technology, China
- Wei Shao 0006 — University of California, Davis, Electrical and Computer Engineering, Davis, CA, USA (and 2 more)
- Wei Shao 0007 — Zhejiang University, College of Computer Science and Technology, Hangzhou, China
- Wei Shao 0009 — City University of Hong Kong, Hong Kong, SAR, China (and 2 more)
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2020 – today
- 2024
[j15]Muhammad Imran, Bushra Haq, Ersin Elbasi, Ahmet E. Topcu, Wei Shao:
Transformer-Based Hierarchical Model for Non-Small Cell Lung Cancer Detection and Classification. IEEE Access 12: 145920-145933 (2024)- [j14]Muhammad Imran, Brianna Nguyen, Jake Pensa, Sara M. Falzarano, Anthony E. Sisk, Muxuan Liang, John Michael DiBianco, Li-Ming Su, Yuyin Zhou, Jason P. Joseph, Wayne G. Brisbane, Wei Shao:
Image registration of in vivo micro-ultrasound and ex vivo pseudo-whole mount histopathology images of the prostate: A proof-of-concept study. Biomed. Signal Process. Control. 96: 106657 (2024) - [j13]Wei Shao, Sulaiman Vesal, Simon J. C. Soerensen, Indrani Bhattacharya, Negar Golestani, Rikiya Yamashita, Christian A. Kunder, Richard E. Fan, Pejman Ghanouni, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
RAPHIA: A deep learning pipeline for the registration of MRI and whole-mount histopathology images of the prostate. Comput. Biol. Medicine 173: 108318 (2024) - [j12]Amarjeet Kumar, Hongxu Jiang, Muhammad Imran, Cyndi Valdes, Gabriela Leon, Dahyun Kang, Parvathi Nataraj, Yuyin Zhou, Michael D. Weiss, Wei Shao:
A flexible 2.5D medical image segmentation approach with in-slice and cross-slice attention. Comput. Biol. Medicine 182: 109173 (2024) - [j11]Hongxu Jiang, Muhammad Imran, Preethika Muralidharan, Anjali Patel, Jake Pensa, Muxuan Liang, Tarik Benidir, Joseph R. Grajo, Jason P. Joseph, Russell Terry, John Michael DiBianco, Li-Ming Su, Yuyin Zhou, Wayne G. Brisbane, Wei Shao:
MicroSegNet: A deep learning approach for prostate segmentation on micro-ultrasound images. Comput. Medical Imaging Graph. 112: 102326 (2024) - [c11]Zhiheng Cheng, Qingyue Wei, Hongru Zhu, Yan Wang, Liangqiong Qu, Wei Shao, Yuyin Zhou:
Unleashing the Potential of SAM for Medical Adaptation via Hierarchical Decoding. CVPR 2024: 3511-3522 - [c10]Boxiao Yu, Savas Ozdemir, Yafei Dong, Wei Shao, Kuangyu Shi, Kuang Gong:
PET Image Denoising Based on 3D Denoising Diffusion Probabilistic Model: Evaluations on Total-Body Datasets. MICCAI (7) 2024: 541-550 - [i12]Muhammad Imran, Jonathan R. Krebs, Veera Rajasekhar Reddy Gopu, Brian Fazzone, Vishal Balaji Sivaraman, Amarjeet Kumar, Chelsea Viscardi, Robert Evans Heithaus, Benjamin Shickel, Yuyin Zhou, Michol A Cooper, Wei Shao:
CIS-UNet: Multi-Class Segmentation of the Aorta in Computed Tomography Angiography via Context-Aware Shifted Window Self-Attention. CoRR abs/2401.13049 (2024) - [i11]Zhiheng Cheng, Qingyue Wei, Hongru Zhu, Yan Wang, Liangqiong Qu, Wei Shao, Yuyin Zhou:
Unleashing the Potential of SAM for Medical Adaptation via Hierarchical Decoding. CoRR abs/2403.18271 (2024) - [i10]Vishal Balaji Sivaraman, Muhammad Imran, Qingyue Wei, Preethika Muralidharan, Michelle R. Tamplin, Isabella M. Grumbach, Randy H. Kardon, Jui-Kai Wang, Yuyin Zhou, Wei Shao:
RetinaRegNet: A Versatile Approach for Retinal Image Registration. CoRR abs/2404.16017 (2024) - [i9]Amarjeet Kumar, Hongxu Jiang, Muhammad Imran, Cyndi Valdes, Gabriela Leon, Dahyun Kang, Parvathi Nataraj, Yuyin Zhou, Michael D. Weiss, Wei Shao:
A Flexible 2.5D Medical Image Segmentation Approach with In-Slice and Cross-Slice Attention. CoRR abs/2405.00130 (2024) - [i8]Hongxu Jiang, Muhammad Imran, Linhai Ma, Teng Zhang, Yuyin Zhou, Muxuan Liang, Kuang Gong, Wei Shao:
Fast-DDPM: Fast Denoising Diffusion Probabilistic Models for Medical Image-to-Image Generation. CoRR abs/2405.14802 (2024) - [i7]Feng Wang, Jiahao Wang, Sucheng Ren, Guoyizhe Wei, Jieru Mei, Wei Shao, Yuyin Zhou, Alan L. Yuille, Cihang Xie:
Mamba-R: Vision Mamba ALSO Needs Registers. CoRR abs/2405.14858 (2024) - 2023
- [j10]Alessa Hering, Lasse Hansen, Tony C. W. Mok, Albert C. S. Chung, Hanna Siebert, Stephanie Häger, Annkristin Lange, Sven Kuckertz, Stefan Heldmann, Wei Shao, Sulaiman Vesal, Mirabela Rusu, Geoffrey A. Sonn, Théo Estienne, Maria Vakalopoulou, Luyi Han, Yunzhi Huang, Pew-Thian Yap, Mikael Brudfors, Yaël Balbastre, Samuel Joutard, Marc Modat, Gal Lifshitz, Dan Raviv, Jinxin Lv, Qiang Li, Vincent Jaouen, Dimitris Visvikis, Constance Fourcade, Mathieu Rubeaux, Wentao Pan, Zhe Xu, Bailiang Jian, Francesca De Benetti, Marek Wodzinski, Niklas Gunnarsson, Jens Sjölund, Daniel Grzech, Huaqi Qiu, Zeju Li, Alexander Thorley, Jinming Duan, Christoph Großbröhmer, Andrew Hoopes, Ingerid Reinertsen, Yiming Xiao, Bennett A. Landman, Yuankai Huo, Keelin Murphy, Nikolas Lessmann, Bram van Ginneken, Adrian V. Dalca, Mattias P. Heinrich:
Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning. IEEE Trans. Medical Imaging 42(3): 697-712 (2023) - [c9]Qingyue Wei, Lequan Yu, Xianhang Li, Wei Shao, Cihang Xie, Lei Xing, Yuyin Zhou:
Consistency-Guided Meta-learning for Bootstrapping Semi-supervised Medical Image Segmentation. MICCAI (4) 2023: 183-193 - [i6]Muhammad Imran, Brianna Nguyen, Jake Pensa, Sara M. Falzarano, Anthony E. Sisk, Muxuan Liang, John Michael DiBianco, Li-Ming Su, Yuyin Zhou, Wayne G. Brisbane, Wei Shao:
Image Registration of In Vivo Micro-Ultrasound and Ex Vivo Pseudo-Whole Mount Histopathology Images of the Prostate: A Proof-of-Concept Study. CoRR abs/2305.19939 (2023) - [i5]Hongxu Jiang, Muhammad Imran, Preethika Muralidharan, Anjali Patel, Jake Pensa, Muxuan Liang, Tarik Benidir, Joseph R. Grajo, Jason P. Joseph, Russell Terry, John Michael DiBianco, Li-Ming Su, Yuyin Zhou, Wayne G. Brisbane, Wei Shao:
MicroSegNet: A Deep Learning Approach for Prostate Segmentation on Micro-Ultrasound Images. CoRR abs/2305.19956 (2023) - [i4]Qingyue Wei, Lequan Yu, Xianhang Li, Wei Shao, Cihang Xie, Lei Xing, Yuyin Zhou:
Consistency-guided Meta-Learning for Bootstrapping Semi-Supervised Medical Image Segmentation. CoRR abs/2307.11604 (2023) - 2022
- [j9]Xiaotao Shen, Wei Shao, Chuchu Wang, Liang Liang, Songjie Chen, Sai Zhang, Mirabela Rusu, Michael P. Snyder:
Deep learning-based pseudo-mass spectrometry imaging analysis for precision medicine. Briefings Bioinform. 23(5) (2022) - [j8]Yue Pan, Di Wang, Muhammad F. A. Chaudhary, Wei Shao, Sarah E. Gerard, Oguz C. Durumeric, Surya P. Bhatt, R. Graham Barr, Eric A. Hoffman, Joseph M. Reinhardt, Gary E. Christensen:
Robust Measures of Image-Registration-Derived Lung Biomechanics in SPIROMICS. J. Imaging 8(11): 309 (2022) - [j7]Indrani Bhattacharya, Arun Seetharaman, Christian Kunder, Wei Shao, Leo C. Chen, Simon John Christoph Soerensen, Jeffrey B. Wang, Nikola C. Teslovich, Richard E. Fan, Pejman Ghanouni, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
Selective identification and localization of indolent and aggressive prostate cancers via CorrSigNIA: an MRI-pathology correlation and deep learning framework. Medical Image Anal. 75: 102288 (2022) - [c8]Indrani Bhattacharya, Wei Shao, Simon J. C. Soerensen, Richard E. Fan, Jeffrey B. Wang, Christian Kunder, Pejman Ghanouni, Geoffrey A. Sonn, Mirabela Rusu:
Integrating zonal priors and pathomic MRI biomarkers for improved aggressive prostate cancer detection on MRI. Medical Imaging: Computer-Aided Diagnosis 2022 - 2021
- [j6]Wei Shao, Linda Banh, Christian A. Kunder, Richard E. Fan, Simon John Christoph Soerensen, Jeffrey B. Wang, Nikola C. Teslovich, Nikhil Madhuripan, Anugayathri Jawahar, Pejman Ghanouni, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
ProsRegNet: A deep learning framework for registration of MRI and histopathology images of the prostate. Medical Image Anal. 68: 101919 (2021) - [j5]Rewa Sood, Wei Shao, Christian Kunder, Nikola C. Teslovich, Jeffrey B. Wang, Simon John Christoph Soerensen, Nikhil Madhuripan, Anugayathri Jawahar, James D. Brooks, Pejman Ghanouni, Richard E. Fan, Geoffrey A. Sonn, Mirabela Rusu:
3D Registration of pre-surgical prostate MRI and histopathology images via super-resolution volume reconstruction. Medical Image Anal. 69: 101957 (2021) - [j4]Wei Shao, Yue Pan, Oguz C. Durumeric, Joseph M. Reinhardt, John E. Bayouth, Mirabela Rusu, Gary E. Christensen:
Geodesic density regression for correcting 4DCT pulmonary respiratory motion artifacts. Medical Image Anal. 72: 102140 (2021) - [c7]Wei Shao, Indrani Bhattacharya, Simon John Christoph Soerensen, Christian A. Kunder, Jeffrey B. Wang, Richard E. Fan, Pejman Ghanouni, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
Weakly Supervised Registration of Prostate MRI and Histopathology Images. MICCAI (4) 2021: 98-107 - [c6]Wei Shao, Sulaiman Vesal, David S. Lim, Cynthia Xinran Li, Negar Golestani, Ahmed Alsinan, Richard E. Fan, Geoffrey A. Sonn, Mirabela Rusu:
The Learn2Reg 2021 MICCAI Grand Challenge (PIMed Team). MIDOG/MOOD/Learn2Reg@MICCAI 2021: 168-173 - [c5]Simon John Christoph Soerensen, Richard E. Fan, Arun Seetharaman, Leo C. Chen, Wei Shao, Indrani Bhattacharya, Michael Borre, Benjamin Chung, Katherine J. To'o, Geoffrey A. Sonn, Mirabela Rusu:
ProGNet: prostate gland segmentation on MRI with deep learning. Medical Imaging: Image Processing 2021 - [i3]Indrani Bhattacharya, David S. Lim, Han Lin Aung, Xingchen Liu, Arun Seetharaman, Christian A. Kunder, Wei Shao, Simon John Christoph Soerensen, Richard E. Fan, Pejman Ghanouni, Katherine J. To'o, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
Bridging the gap between prostate radiology and pathology through machine learning. CoRR abs/2112.02164 (2021) - [i2]Alessa Hering, Lasse Hansen, Tony C. W. Mok, Albert C. S. Chung, Hanna Siebert, Stephanie Häger, Annkristin Lange, Sven Kuckertz, Stefan Heldmann, Wei Shao, Sulaiman Vesal, Mirabela Rusu, Geoffrey A. Sonn, Théo Estienne, Maria Vakalopoulou, Luyi Han, Yunzhi Huang, Mikael Brudfors, Yaël Balbastre, Samuel Joutard, Marc Modat, Gal Lifshitz, Dan Raviv, Jinxin Lv, Qiang Li, Vincent Jaouen, Dimitris Visvikis, Constance Fourcade, Mathieu Rubeaux, Wentao Pan, Zhe Xu, Bailiang Jian, Francesca De Benetti, Marek Wodzinski, Niklas Gunnarsson, Huaqi Qiu, Zeju Li, Christoph Großbröhmer, Andrew Hoopes, Ingerid Reinertsen, Yiming Xiao, Bennett A. Landman, Yuankai Huo, Keelin Murphy, Bram van Ginneken, Adrian V. Dalca, Mattias P. Heinrich:
Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning. CoRR abs/2112.04489 (2021) - 2020
- [j3]Wei Shao, Taylor J. Patton, Sarah E. Gerard, Yue Pan, Joseph M. Reinhardt, Oguz C. Durumeric, John E. Bayouth, Gary E. Christensen:
N-Phase Local Expansion Ratio for Characterizing Out-of-Phase Lung Ventilation. IEEE Trans. Medical Imaging 39(6): 2025-2034 (2020) - [c4]Indrani Bhattacharya, Arun Seetharaman, Wei Shao, Rewa Sood, Christian A. Kunder, Richard E. Fan, Simon John Christoph Soerensen, Jeffrey B. Wang, Pejman Ghanouni, Nikola C. Teslovich, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
CorrSigNet: Learning CORRelated Prostate Cancer SIGnatures from Radiology and Pathology Images for Improved Computer Aided Diagnosis. MICCAI (2) 2020: 315-325 - [i1]Indrani Bhattacharya, Arun Seetharaman, Wei Shao, Rewa Sood, Christian A. Kunder, Richard E. Fan, Simon John Christoph Soerensen, Jeffrey B. Wang, Pejman Ghanouni, Nikola C. Teslovich, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu:
CorrSigNet: Learning CORRelated Prostate Cancer SIGnatures from Radiology and Pathology Images for Improved Computer Aided Diagnosis. CoRR abs/2008.00119 (2020)
2010 – 2019
- 2019
- [j2]Xiao Shao, Xinjian Chen, Xiaojun Yu, Ya Hu, Linbo Liu, Fei Shi, Wei Shao, Jianhua Mo:
Nondestructive Measurement of Conformal Coating Thickness on Printed Circuit Board With Ultra-High Resolution Optical Coherence Tomography. IEEE Access 7: 18138-18145 (2019) - [j1]Caglar Koylu, Chang Zhao, Wei Shao:
Deep Neural Networks and Kernel Density Estimation for Detecting Human Activity Patterns from Geo-Tagged Images: A Case Study of Birdwatching on Flickr. ISPRS Int. J. Geo Inf. 8(1): 45 (2019) - 2018
- [c3]Wei Shao, Taylor J. Patton, Sarah E. Gerard, Yue Pan, Joseph M. Reinhardt, John E. Bayouth, Oguz C. Durumeric, Gary E. Christensen:
Detecting Out-of-Phase Ventilation Using 4DCT to Improve Radiation Therapy for Lung Cancer. RAMBO+BIA+TIA@MICCAI 2018: 251-259 - [c2]Wei Shao, Sarah E. Gerard, Yue Pan, Taylor J. Patton, Joseph M. Reinhardt, Oguz C. Durumeric, John E. Bayouth, Gary E. Christensen:
Sensitivity analysis of Jacobian determinant used in treatment planning for lung cancer. Medical Imaging: Image Processing 2018: 1057418 - 2016
- [c1]Wei Shao, Gary E. Christensen, Hans J. Johnson, Joo Hyun Song, Oguz C. Durumeric, Casey P. Johnson, Joseph J. Shaffer, Vincent A. Magnotta, Jess G. Fiedorowicz, John A. Wemmie:
Population Shape Collapse in Large Deformation Registration of MR Brain Images. CVPR Workshops 2016: 549-557
Coauthor Index
Simon J. C. Soerensen
aka: Simon John Christoph Soerensen
aka: Simon John Christoph Soerensen
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