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2020 – today
- 2024
[i3]Yifan Gao, Zakariyya Mughal, Jose A. Jaramillo-Villegas, Marie Corradi, Alexandre Borrel, Ben Lieberman, Suliman Sharif, John Shaffer, Karamarie Fecho, Ajay Chatrath, Alexandra Maertens, Marc A. T. Teunis, Nicole C. Kleinstreuer, Thomas Hartung, Thomas Luechtefeld:
BioBricks.ai: A Versioned Data Registry for Life Sciences Data Assets. CoRR abs/2408.17320 (2024)- 2023
- [j9]Priya Sharma, Perry Haaland, Ashok K. Krishnamurthy, Bo Lan, Patrick L. Schmitt, Meghamala Sinha, Hao Xu, Karamarie Fecho
:
Evaluating robustness of a generalized linear model when applied to electronic health record data accessed using an Open API. Health Informatics J. 29(2): 146045822311708 (2023) - 2022
- [j8]Karamarie Fecho, Stanley C. Ahalt, Michael Knowles, Ashok K. Krishnamurthy, Margaret Leigh, Kenneth Morton, Emily R. Pfaff, Max Wang, Hong Yi:
Leveraging Open Electronic Health Record Data and Environmental Exposures Data to Derive Insights Into Rare Pulmonary Disease. Frontiers Artif. Intell. 5 (2022) - [i2]Deepak R. Unni, Sierra A. T. Moxon, Michael Bada, Matthew H. Brush, Richard M. Bruskiewich, Paul A. Clemons, Vlado Dancík, Michel Dumontier, Karamarie Fecho, Gustavo Glusman, Jennifer J. Hadlock, Nomi L. Harris, Arpita Joshi, Tim E. Putman, Guangrong Qin, Stephen A. Ramsey, Kent A. Shefchek, Harold Solbrig, Karthik Soman, Anne E. Thessen, Melissa A. Haendel, Chris Bizon, Christopher J. Mungall:
Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science. CoRR abs/2203.13906 (2022) - 2021
- [c2]David Borland, Irena Brain, Karamarie Fecho, Emily R. Pfaff, Hao Xu, James Champion, Chris Bizon, David Gotz:
Enabling Longitudinal Exploratory Analysis of Clinical COVID Data. VAHC 2021: 19-24 - [i1]David Borland, Irena Brain, Karamarie Fecho, Emily R. Pfaff, Hao Xu, James Champion, Chris Bizon, David Gotz:
Enabling Longitudinal Exploratory Analysis of Clinical COVID Data. CoRR abs/2108.11476 (2021) - 2020
- [j7]Hao Xu, Steven Cox, Lisa Stillwell, Emily R. Pfaff, James Champion, Stanley C. Ahalt, Karamarie Fecho:
FHIR PIT: an open software application for spatiotemporal integration of clinical data and environmental exposures data. BMC Medical Informatics Decis. Mak. 20(1): 53 (2020) - [c1]Karamarie Fecho, Chris Bizon, Frederick W. Miller, Shepherd Schurman, Charles Schmitt, William Xue, Patrick Wang, Kenneth D. Morton, Steven Cox, Alexander Tropsha:
Use of the Open ROBOKOP Knowledge Graph-Based Application to Provide Mechanistic Explanations for Observed Associations between Environmental Exposures and Immune-Mediated Diseases. AMIA 2020
2010 – 2019
- 2019
- [j6]Kenneth Morton, Patrick Wang, Chris Bizon, Steven Cox, James P. Balhoff, Yaphet Kebede, Karamarie Fecho, Alexander Tropsha:
ROBOKOP: an abstraction layer and user interface for knowledge graphs to support question answering. Bioinform. 35(24): 5382-5384 (2019) - [j5]Karamarie Fecho, Emily R. Pfaff, Hao Xu, James Champion, Steve Cox, Lisa Stillwell, David B. Peden, Chris Bizon, Ashok Kumar Krishnamurthy, Alexander Tropsha, Stanley C. Ahalt:
A novel approach for exposing and sharing clinical data: the Translator Integrated Clinical and Environmental Exposures Service. J. Am. Medical Informatics Assoc. 26(10): 1064-1073 (2019) - [j4]Karamarie Fecho, Stanley C. Ahalt, Saravanan Arunachalam, James Champion, Christopher G. Chute, Sarah Davis, Kenneth Gersing, Gustavo Glusman, Jennifer Hadlock, Jewel Lee, Emily R. Pfaff, Max Robinson, Eric Sid, Casey N. Ta, Hao Xu, Richard L. Zhu, Qian Zhu, David B. Peden:
Sex, obesity, diabetes, and exposure to particulate matter among patients with severe asthma: Scientific insights from a comparative analysis of open clinical data sources during a five-day hackathon. J. Biomed. Informatics 100 (2019) - [j3]Chris Bizon, Steven Cox, James P. Balhoff, Yaphet Kebede, Patrick Wang, Kenneth Morton, Karamarie Fecho, Alexander Tropsha:
ROBOKOP KG and KGB: Integrated Knowledge Graphs from Federated Sources. J. Chem. Inf. Model. 59(12): 4968-4973 (2019) - [j2]Xingmin Aaron Zhang, Amy Yates, Nicole A. Vasilevsky, Jean-Philippe F. Gourdine, Tiffany J. Callahan, Leigh C. Carmody, Daniel Danis, Marcin P. Joachimiak, Vida Ravanmehr, Emily R. Pfaff, James Champion, Kimberly Robasky, Hao Xu, Karamarie Fecho, Nephi A. Walton, Richard L. Zhu, Justin Ramsdill, Christopher J. Mungall, Sebastian Köhler, Melissa A. Haendel, Clement J. McDonald, Daniel J. Vreeman, David B. Peden, Tellen D. Bennett, James A. Feinstein, Blake Martin, Adrianne L. Stefanski, Lawrence E. Hunter, Christopher G. Chute, Peter N. Robinson:
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery. npj Digit. Medicine 2 (2019) - 2017
- [j1]Jay Aikat, Thomas M. Carsey, Karamarie Fecho, Kevin Jeffay, Ashok Kumar Krishnamurthy, Peter J. Mucha, Arcot Rajasekar, Stanley C. Ahalt:
Scientific Training in the Era of Big Data: A New Pedagogy for Graduate Education. Big Data 5(1): 12-18 (2017)
Coauthor Index
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