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2020 – today
- 2024
[c5]Nisha Pillai, Athish Ram Das, Moses Ayoola, Ganga Gireesan, Bindu Nanduri, Mahalingam Ramkumar:
EndToEndML: An Open-Source End-to-End Pipeline for Machine Learning Applications. ICICT 2024: 350-358- [c4]Nisha Pillai, Ganga Gireesan, Michael J. Rothrock, Bindu Nanduri, Zhiqian Chen, Mahalingam Ramkumar:
Towards Interpreting Multi-Objective Feature Associations. SysCon 2024: 1-8 - [i5]Ganga Gireesan, Nisha Pillai, Michael J. Rothrock, Bindu Nanduri, Zhiqian Chen, Mahalingam Ramkumar:
Deep Sensitivity Analysis for Objective-Oriented Combinatorial Optimization. CoRR abs/2403.00016 (2024) - [i4]Nisha Pillai, Ganga Gireesan, Michael J. Rothrock Jr., Bindu Nanduri, Zhiqian Chen, Mahalingam Ramkumar:
Towards Interpreting Multi-Objective Feature Associations. CoRR abs/2403.00017 (2024) - [i3]Nisha Pillai, Athish Ram Das, Moses Ayoola, Ganga Gireesan, Bindu Nanduri, Mahalingam Ramkumar:
EndToEndML: An Open-Source End-to-End Pipeline for Machine Learning Applications. CoRR abs/2403.18203 (2024) - [i2]Nisha Pillai, Bindu Nanduri, Michael J. Rothrock Jr., Zhiqian Chen, Mahalingam Ramkumar:
Bayesian-Guided Generation of Synthetic Microbiomes with Minimized Pathogenicity. CoRR abs/2405.00070 (2024) - 2023
- [c3]Nisha Pillai, Bindu Nanduri, Michael J. Rothrock, Zhiqian Chen, Mahalingam Ramkumar:
Towards Optimal Microbiome to Inhibit Multidrug Resistance. CIBCB 2023: 1-9 - 2022
- [j19]Tayo Obafemi-Ajayi
, Andy D. Perkins, Bindu Nanduri, Donald C. Wunsch II, James A. Foster, Joan Peckham:
No-boundary thinking: a viable solution to ethical data-driven AI in precision medicine. AI Ethics 2(4): 635-643 (2022) - [j18]Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T. Toby:
Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference. Frontiers Artif. Intell. 5: 859700 (2022)
2010 – 2019
- 2019
- [j17]Jonathan D. Wren, Robert J. Doerksen, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar:
Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. BMC Bioinform. 20-S(2): 95:1-95:5 (2019) - 2017
- [j16]Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar:
Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 18(14): 498:1-498:5 (2017) - 2016
- [j15]Mais G. Ammari, Cathy R. Gresham, Fiona M. McCarthy, Bindu Nanduri:
HPIDB 2.0: a curated database for host-pathogen interactions. Database J. Biol. Databases Curation 2016 (2016) - [j14]Jonathan D. Wren, Inimary T. Toby, Huxiao Hong, Bindu Nanduri, Rakesh Kaundal, Mikhail G. Dozmorov, Shraddha Thakkar:
Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 17(S-13): 356 (2016) - 2015
- [j13]Xiuzhen Huang, Steven F. Jennings, Barry Bruce, Alison Buchan, Liming Cai, Pengyin Chen, Carole L. Cramer, Weihua Guan, Uwe Hilgert, Hongmei Jiang, Zenglu Li, Gail McClure, Donald F. McMullen, Bindu Nanduri, Andy D. Perkins, Bhanu Rekepalli, Saeed Salem, Jennifer Specker, Karl Walker, Donald C. Wunsch, Donghai Xiong, Shuzhong Zhang, Yu Zhang, Zhongming Zhao, Jason H. Moore:
Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm. BioData Min. 8: 7 (2015) - [i1]Prashanti Manda, Fiona M. McCarthy, Bindu Nanduri, Susan M. Bridges:
Information Theoretic Interestingness Measures for Cross-Ontology Data Mining in the Mouse Anatomy Ontology and the Gene Ontology. CoRR abs/1504.08027 (2015) - 2013
- [j12]Xiuzhen Huang, Barry Bruce, Alison Buchan, Clare Bates Congdon, Carole L. Cramer, Steven F. Jennings, Hongmei Jiang, Zenglu Li, Gail McClure, Rick McMullen, Jason H. Moore, Bindu Nanduri, Joan Peckham, Andy D. Perkins, Shawn W. Polson, Bhanu Rekepalli, Saeed Salem, Jennifer Specker, Donald C. Wunsch, Donghai Xiong, Shuzhong Zhang, Zhongming Zhao:
No-boundary thinking in bioinformatics research. BioData Min. 6: 19 (2013) - [c2]Tamer Aldwairi, Bindu Nanduri, Mahalingam Ramkumar, Dilip Gautam, Michael Johnson, Andy D. Perkins:
Statistical Methods for Ambiguous Sequence Mappings. BCB 2013: 674 - 2012
- [j11]Joseph S. Reddy, Ranjit Kumar, James M. Watt, Mark L. Lawrence, Shane C. Burgess, Bindu Nanduri:
Transcriptome profile of a bovine respiratory disease pathogen: Mannheimia haemolytica PHL213. BMC Bioinform. 13(S-15): S4 (2012) - 2011
- [j10]William S. Sanders, Nan Wang, Susan M. Bridges, Brandon M. Malone, Yoginder S. Dandass, Fiona M. McCarthy, Bindu Nanduri, Mark L. Lawrence, Shane C. Burgess:
The Proteogenomic Mapping Tool. BMC Bioinform. 12: 115 (2011) - [j9]Ranjit Kumar, Shane C. Burgess, Mark L. Lawrence, Bindu Nanduri:
TAAPP: Tiling Array Analysis Pipeline for Prokaryotes. Genom. Proteom. Bioinform. 9(1-2): 56-62 (2011) - 2010
- [j8]Ranjit Kumar, Bindu Nanduri:
HPIDB - a unified resource for host-pathogen interactions. BMC Bioinform. 11(S-6): S16 (2010) - [j7]Prashanti Manda, McKinley G. Freeman, Susan M. Bridges, T. J. Jankun-Kelly, Bindu Nanduri, Fiona M. McCarthy, Shane C. Burgess:
GOModeler- A tool for hypothesis-testing of functional genomics datasets. BMC Bioinform. 11(S-6): S29 (2010) - [j6]Mais G. Ammari, Fiona M. McCarthy, Bindu Nanduri, Lesya M. Pinchuk:
Analysis of Bovine Viral Diarrhea Viruses-infected monocytes: identification of cytopathic and non-cytopathic biotype differences. BMC Bioinform. 11(S-6): S9 (2010) - [p1]Bindu Nanduri, Nan Wang, Mark L. Lawrence, Susan M. Bridges, Shane C. Burgess:
Gene Model Detection Using Mass Spectrometry. Proteome Bioinformatics 2010: 137-144
2000 – 2009
- 2009
- [j5]Ken Pendarvis, Ranjit Kumar, Shane C. Burgess, Bindu Nanduri:
An automated proteomic data analysis workflow for mass spectrometry. BMC Bioinform. 10(S-11): 17 (2009) - 2008
- [j4]Divyaswetha Peddinti, Bindu Nanduri, Abdullah Kaya, Jean M. Feugang, Shane C. Burgess, Erdogan Memili:
Comprehensive proteomic analysis of bovine spermatozoa of varying fertility rates and identification of biomarkers associated with fertility. BMC Syst. Biol. 2: 19 (2008) - [c1]Nan Wang, Changhe Yuan, Shane C. Burgess, Bindu Nanduri, Mark L. Lawrence, Susan Bridges:
Integrating Evidence for Evaluation of Potential Novel Protein-coding Genes Using Bayesian Networks. BIOCOMP 2008: 838-843 - 2007
- [j3]Susan M. Bridges, G. Bryce Magee, Nan Wang, W. Paul Williams, Shane C. Burgess, Bindu Nanduri:
ProtQuant: a tool for the label-free quantification of MudPIT proteomics data. BMC Bioinform. 8(S-7) (2007) - [j2]William S. Sanders, Susan M. Bridges, Fiona M. McCarthy, Bindu Nanduri, Shane C. Burgess:
Prediction of peptides observable by mass spectrometry applied at the experimental set level. BMC Bioinform. 8(S-7) (2007) - 2001
- [j1]Bindu Nanduri, Robert L. Eoff, Alan J. Tackett, Kevin D. Raney:
Measurement of steady-state kinetic parameters for DNA unwinding by the bacteriophage T4 Dda helicase: use of peptide nucleic acids to trap single-stranded DNA products of helicase reactions. Nucleic Acids Res. 29(13): 2829-2835 (2001)
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