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ORCIDVanessa V. Sochat
Person information
- affiliation: Lawrence Livermore National Lab, CA, USA
- affiliation (former): Stanford University, CA, USA
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2020 – today
- 2022
[j17]Miranda Mundt
, Keith Beattie, Jonathan Bisila, Charles R. Ferenbaugh, William F. Godoy, Rinku Gupta, Jonathan E. Guyer, Miriam Kiran, Addi Malviya-Thakur, Reed Milewicz, Benjamin H. Sims, Vanessa V. Sochat, Joshua B. Teves:
For the Public Good: Connecting, Retaining, and Recognizing Current and Future RSEs at U.S. National Research Laboratories and Agencies. Comput. Sci. Eng. 24(6): 6-13 (2022)- [j16]Vanessa V. Sochat:
CiteLang: Modeling the Research Software Ecosystem. J. Open Source Softw. 7(77): 4458 (2022) - [i5]Vanessa V. Sochat, Tim Haines:
Software Compatibility Tool Agreement. CoRR abs/2212.03364 (2022) - [i4]Vanessa V. Sochat, Matthieu Muffato, Audrey Stott, Marco De La Pierre, Georgia Stuart:
Automated Cache for Container Executables. CoRR abs/2212.07376 (2022) - 2021
- [j15]Vanessa V. Sochat:
The 10 best practices for remote software engineering. Commun. ACM 64(5): 32-36 (2021) - [j14]Yaroslav O. Halchenko, Kyle Meyer, Benjamin Poldrack, Debanjum Singh Solanky, Adina Wagner, Jason Gors, Dave MacFarlane, Dorian Pustina, Vanessa V. Sochat, Satrajit S. Ghosh, Christian Mönch, Christopher J. Markiewicz, Laura Waite, Ilya Shlyakhter, Alejandro de la Vega, Soichi Hayashi, Christian Olaf Häusler, Jean-Baptiste Poline, Tobias Kadelka, Kusti Skytén, Dorota Jarecka, David N. Kennedy, Ted J. Strauss, Matt Cieslak, Peter Vavra, Horea-Ioan Ioanas, Robin Schneider, Mika Pflüger, James V. Haxby, Simon B. Eickhoff, Michael Hanke:
DataLad: distributed system for joint management of code, data, and their relationship. J. Open Source Softw. 6(63): 3262 (2021) - [j13]Vanessa V. Sochat, Alec Scott:
Collaborative Container Modules with Singularity Registry HPC. J. Open Source Softw. 6(63): 3311 (2021) - [i3]Daniel S. Katz, Morane Gruenpeter, Tom Honeyman, Lorraine J. Hwang, Mark D. Wilkinson, Vanessa V. Sochat, Hartwig Anzt, Carole A. Goble:
A Fresh Look at FAIR for Research Software. CoRR abs/2101.10883 (2021) - [i2]Felix Mölder, Kim Philipp Jablonski, Brice Letcher, Michael B. Hall, Christopher Tomkins-Tinch, Vanessa V. Sochat, Jan Forster, Soohyun Lee, Sven Twardziok, Alexander Kanitz, Andreas Wilm, Manuel Holtgrewe, Sven Rahmann, Sven Nahnsen, Johannes Köster:
Sustainable data analysis with Snakemake. F1000Research 10: 33 (2021) - 2020
- [j12]Vanessa V. Sochat:
GridTest: testing and metrics collection for Python. J. Open Source Softw. 5(51): 2284 (2020) - [j11]Daniel Nüst, Vanessa V. Sochat, Ben Marwick, Stephen J. Eglen, Tim Head, Tony Hirst, Benjamin D. Evans:
Ten simple rules for writing Dockerfiles for reproducible data science. PLoS Comput. Biol. 16(11) (2020) - [c4]Vanessa V. Sochat:
AskCI Server: Collaborative knowledge base. PEARC 2020: 514-517 - [i1]Vanessa V. Sochat:
AskCI Server: Collaborative and version controlled knowledge base. CoRR abs/2003.05973 (2020)
2010 – 2019
- 2019
- [j10]Vanessa V. Sochat:
WatchMe: Software for Reproducible Monitoring and Data Collection. J. Open Source Softw. 4(37): 1388 (2019) - [j9]Vanessa V. Sochat:
Container Tree: Software to Model Container Filesystems, Packages, and Inheritance. J. Open Source Softw. 4(37): 1418 (2019) - [j8]Vanessa V. Sochat:
Singularity Compose: Orchestration for Singularity Instances. J. Open Source Softw. 4(40): 1578 (2019) - 2018
- [j7]Vanessa V. Sochat:
The Experiment Factory: Reproducible Experiment Containers. J. Open Source Softw. 3(22): 521 (2018) - [j6]Vanessa V. Sochat:
HelpMe Command Line Helper Utility. J. Open Source Softw. 3(26): 775 (2018) - [j5]Vanessa V. Sochat:
Containershare: Open Source Registry to build, test, deploy with CircleCI. J. Open Source Softw. 3(28): 878 (2018) - [c3]Victoria Stodden, Xiaomian Wu, Vanessa V. Sochat:
AIM: An Abstraction for Improving Machine Learning Prediction. DSW 2018: 150-154 - 2017
- [j4]Vanessa V. Sochat:
Singularity Registry: Open Source Registry for Singularity Images. J. Open Source Softw. 2(18): 426 (2017) - 2016
- [j3]Krzysztof J. Gorgolewski, Gaël Varoquaux, Gabriel Rivera, Yannick Schwartz, Vanessa V. Sochat, Satrajit S. Ghosh, Camille Maumet, Thomas E. Nichols, Jean-Baptiste Poline, Tal Yarkoni, Daniel S. Margulies, Russell A. Poldrack:
NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain. NeuroImage 124: 1242-1244 (2016) - 2015
- [j2]Vanessa V. Sochat:
AuthorSynth: a collaboration network and behaviorally-based visualization tool of activation reports from the neuroscience literature. Frontiers Neuroinformatics 9: 6 (2015) - [j1]Krzysztof J. Gorgolewski, Gaël Varoquaux, Gabriel Rivera, Yannick Schwartz, Satrajit S. Ghosh, Camille Maumet, Vanessa V. Sochat, Thomas E. Nichols, Russell A. Poldrack, Jean-Baptiste Poline, Tal Yarkoni, Daniel S. Margulies:
NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Frontiers Neuroinformatics 9: 8 (2015) - [c2]Vanessa V. Sochat, Maude David, Dennis P. Wall:
Translational Meta-analytical Methods to Localize the Regulatory Patterns of Neurological Disorders in the Human Brain. AMIA 2015 - 2013
- [c1]Sam Finlayson, Vanessa V. Sochat, Linda Szabo, Luke Yancy Jr.:
A Rapid Learning System for Personalized Glioblastoma Treatment Planning. AMIA 2013
Coauthor Index
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