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2020 – today
- 2023
[j48]Rashmie Abeysinghe, Fengbo Zheng, Elmer V. Bernstam, Jay Shi, Olivier Bodenreider, Licong Cui
:
A deep learning approach to identify missing is-a relations in SNOMED CT. J. Am. Medical Informatics Assoc. 30(3): 475-484 (2023)- [j47]Kin Wah Fung, Julia Xu, Shannon McConnell-Lamptey, Donna Pickett, Olivier Bodenreider:
A practical strategy to use the ICD-11 for morbidity coding in the United States without a clinical modification. J. Am. Medical Informatics Assoc. 30(10): 1614-1621 (2023) - [j46]Yuqing Mao, Randolph A. Miller, Olivier Bodenreider, Vinh Nguyen, Kin Wah Fung:
Two complementary AI approaches for predicting UMLS semantic group assignment: heuristic reasoning and deep learning. J. Am. Medical Informatics Assoc. 30(12): 1887-1894 (2023) - [c170]Bernal Jimenez Gutierrez, Yuqing Mao, Vinh Nguyen, Kin Wah Fung, Yu Su, Olivier Bodenreider:
Solving the Right Problem is Key for Translational NLP: A Case Study in UMLS Vocabulary Insertion. EMNLP (Findings) 2023: 704-717 - [i7]Bernal Jimenez Gutierrez, Yuqing Mao, Vinh Nguyen, Kin Wah Fung, Yu Su, Olivier Bodenreider:
Solving the Right Problem is Key for Translational NLP: A Case Study in UMLS Vocabulary Insertion. CoRR abs/2311.15106 (2023) - 2022
- [c169]Goonmeet Bajaj, Vinh Nguyen, Thilini Wijesiriwardene, Hong Yung Yip, Vishesh Javangula, Amit P. Sheth, Srinivasan Parthasarathy, Olivier Bodenreider:
Evaluating Biomedical Word Embeddings for Vocabulary Alignment at Scale in the UMLS Metathesaurus Using Siamese Networks. Insights@ACL 2022: 82-87 - [c168]Olivier Bodenreider:
Powering Semantic Analysis with Bio-ontologies. WWW (Companion Volume) 2022: 821 - [c167]Vinh Nguyen, Hong Yung Yip, Goonmeet Bajaj, Thilini Wijesiriwardene, Vishesh Javangula, Srinivasan Parthasarathy, Amit P. Sheth, Olivier Bodenreider:
Context-Enriched Learning Models for Aligning Biomedical Vocabularies at Scale in the UMLS Metathesaurus. WWW 2022: 1037-1046 - [i6]Thilini Wijesiriwardene, Vinh Nguyen, Goonmeet Bajaj, Hong Yung Yip, Vishesh Javangula, Yuqing Mao, Kin Wah Fung, Srinivasan Parthasarathy, Amit P. Sheth, Olivier Bodenreider:
UBERT: A Novel Language Model for Synonymy Prediction at Scale in the UMLS Metathesaurus. CoRR abs/2204.12716 (2022) - [i5]Vinh Nguyen, Olivier Bodenreider:
UVA Resources for the Biomedical Vocabulary Alignment at Scale in the UMLS Metathesaurus. CoRR abs/2205.10575 (2022) - 2021
- [j45]Kin Wah Fung, Julia Xu, Shannon McConnell-Lamptey, Donna Pickett, Olivier Bodenreider:
Feasibility of replacing the ICD-10-CM with the ICD-11 for morbidity coding: A content analysis. J. Am. Medical Informatics Assoc. 28(11): 2404-2411 (2021) - [c166]Kevin Bretonnel Cohen, Anna M. Ripple, Asma Ben Abacha, Olivier Bodenreider, Orin Hargraves, Karin Verspoor, Pierre Zweigenbaum, Dina Demner-Fushman:
Reproducibility in biomedical natural language processing: A FAIR approach to what we need to know. AMIA 2021 - [c165]Kin Wah Fung, Julia Xu, Shannon McConnell-Lamptey, Donna Pickett, Olivier Bodenreider:
Can ICD-11 Replace ICD-10-CM for Morbidity Coding in the U.S.? AMIA 2021 - [c164]Julia Xu, Kin Wah Fung, Olivier Bodenreider:
Sequential Mapping - A Novel Approach to Map from ICD-10-CM to ICD-11. MedInfo 2021: 96-100 - [c163]Vinh Nguyen, Olivier Bodenreider:
Adding an Attention Layer Improves the Performance of a Neural Network Architecture for Synonymy Prediction in the UMLS Metathesaurus. MedInfo 2021: 116-119 - [c162]Vinh Nguyen, Hong Yung Yip, Olivier Bodenreider:
Biomedical Vocabulary Alignment at Scale in the UMLS Metathesaurus. WWW 2021: 2672-2683 - [i4]Goonmeet Bajaj, Vinh Nguyen, Thilini Wijesiriwardene, Hong Yung Yip, Vishesh Javangula, Srinivasan Parthasarathy, Amit P. Sheth, Olivier Bodenreider:
Evaluating Biomedical BERT Models for Vocabulary Alignment at Scale in the UMLS Metathesaurus. CoRR abs/2109.13348 (2021) - 2020
- [j44]Kin Wah Fung, Julia Xu, Olivier Bodenreider:
The new International Classification of Diseases 11th edition: a comparative analysis with ICD-10 and ICD-10-CM. J. Am. Medical Informatics Assoc. 27(5): 738-746 (2020) - [j43]Jake Vasilakes, Anusha Bompelli, Jeffrey R. Bishop, Terrence J. Adam, Olivier Bodenreider, Rui Zhang:
Assessing the enrichment of dietary supplement coverage in the Unified Medical Language System. J. Am. Medical Informatics Assoc. 27(10): 1547-1555 (2020) - [c161]Tien T. T. Tran, Sy V. Nghiem, Van T. Le, Tho Thanh Quan, Vinh Nguyen, Hong Yung Yip, Olivier Bodenreider:
Siamese KG-LSTM: A deep learning model for enriching UMLS Metathesaurus synonymy. KSE 2020: 281-286
2010 – 2019
- 2019
- [c160]Jean Noël Nikiema, Olivier Bodenreider:
Comparing the Representation of Medicinal Products in RxNorm and SNOMED CT - Consequences on interoperability. ICBO 2019: 1-6 - [c159]Soon Jye Kho, Amit P. Sheth, Olivier Bodenreider:
Automatic Identification of Individual Drugs in Death Certificates. MedInfo 2019: 183-187 - [c158]Jake Vasilakes, Yadan Fan, Rubina F. Rizvi, Anusha Bompelli, Olivier Bodenreider, Rui Zhang:
Normalizing Dietary Supplement Product Names Using the RxNorm Model. MedInfo 2019: 408-412 - [c157]Vinh Nguyen, Hong Yung Yip, Harsh Thakkar, Qingliang Li, Evan Bolton, Olivier Bodenreider:
Singleton Property Graph: Adding A Semantic Web Abstraction Layer to Graph Databases. BlockSW/CKG@ISWC 2019 - [c156]Hong Yung Yip, Vinh Nguyen, Olivier Bodenreider:
Construction of UMLS Metathesaurus with Knowledge-Infused Deep Learning. BlockSW/CKG@ISWC 2019 - 2018
- [j42]Licong Cui, Olivier Bodenreider, Jay Shi, Guo-Qiang Zhang:
Auditing SNOMED CT hierarchical relations based on lexical features of concepts in non-lattice subgraphs. J. Biomed. Informatics 78: 177-184 (2018) - [c155]Olivier Bodenreider, Lee B. Peters:
Using RxNav for drug analytics - How to interpret obsolete drug identifiers? AMIA 2018 - [c154]Jay Pedersen, Bret J. Gardner, James R. Campbell, Walter S. Campbell, Carol Geary, Lee B. Peters, Olivier Bodenreider, James C. McClay:
Historically Comprehensive Medications Metadata for i2b2 Data Warehouses. AMIA 2018 - [c153]Lee B. Peters, Richard Rice, Olivier Bodenreider:
RxNav-in-a-Box - A locally-installable version of RxNav and related APIs. AMIA 2018 - [c152]Olivier Bodenreider, Julie James:
The New SNOMED CT International Medicinal Product Model. ICBO 2018 - 2017
- [j41]Licong Cui, Wei Zhu, Shiqiang Tao, James T. Case, Olivier Bodenreider, Guo-Qiang Zhang:
Mining non-lattice subgraphs for detecting missing hierarchical relations and concepts in SNOMED CT. J. Am. Medical Informatics Assoc. 24(4): 788-798 (2017) - [j40]Kin Wah Fung, Joan Kapusnik-Uner, Jean Cunningham, Stefanie Higby-Baker, Olivier Bodenreider:
Comparison of three commercial knowledge bases for detection of drug-drug interactions in clinical decision support. J. Am. Medical Informatics Assoc. 24(4): 806-812 (2017) - [j39]Rave Harpaz, William DuMouchel, Martijn J. Schuemie, Olivier Bodenreider, Carol Friedman, Eric Horvitz, Anna Ripple, Alfred Sorbello, Ryen W. White, Rainer Winnenburg, Nigam H. Shah:
Toward multimodal signal detection of adverse drug reactions. J. Biomed. Informatics 76: 41-49 (2017) - [c151]Olivier Bodenreider, Lee B. Peters:
RxNorm Concept History Service. AMIA 2017 - [c150]Olivier Bodenreider, Lee B. Peters:
RxMix - Use of NLM drug APIs by non-programmers. AMIA 2017 - [c149]Fabrício S. P. Kury, Olivier Bodenreider:
Mapping U.S. FDA National Drug Codes to Anatomical-Therapeutic-Chemical Classes using RxNorm. AMIA 2017 - [c148]Lee B. Peters, Olivier Bodenreider:
RxNav 2.0 - A web-based, mobile-responsive RxNorm browser. AMIA 2017 - [c147]Satyajeet Raje, Olivier Bodenreider:
Identifying Potentially Missing Hierarchical Relations in SNOMED CT based on Lexical Features - Impact of Synonyms and Lexico-syntactic Constraints. AMIA 2017 - [c146]Abhivyakti Sawarkar, Alfred Sorbello, Anna Ripple, Olivier Bodenreider:
Detecting Adverse Drug Event Safety Signals from MEDLINE Reports: Challenges in Employing Cross-terminology Mapping of MeSH to MedDRA. AMIA 2017 - [c145]Satyajeet Raje, Olivier Bodenreider:
Investigating the Coverage of Diseases across Biomedical Research and Clinical Ontologies. CRI 2017 - [c144]Zhiguo Yu, Thang Nguyen, Ferdinand Dhombres, Todd R. Johnson, Olivier Bodenreider:
"Hybrid Topics" - Facilitating the Interpretation of Topics Through the Addition of MeSH Descriptors to Bags of Words. MedInfo 2017: 662-666 - [c143]Nathan J. Bahr, Scott D. Nelson, Rainer Winnenburg, Olivier Bodenreider:
Eliciting the Intension of Drug Value Sets - Principles and Quality Assurance Applications. MedInfo 2017: 843-847 - [c142]Ferdinand Dhombres, Olivier Bodenreider:
Trends in Fetal Medicine: A 10-Year Bibliometric Analysis of Prenatal Diagnosis. MedInfo 2017: 853-857 - [c141]Scott D. Nelson, Jaqui Parker, Robert F. Lario, Rainer Winnenburg, Mark S. Erlbaum, Michael J. Lincoln, Olivier Bodenreider:
Interoperability of Medication Classification Systems: Lessons Learned Mapping Established Pharmacologic Classes (EPCs) to SNOMED CT. MedInfo 2017: 920-924 - [c140]Satyajeet Raje, Olivier Bodenreider:
Interoperability of Disease Concepts in Clinical and Research Ontologies: Contrasting Coverage and Structure in the Disease Ontology and SNOMED CT. MedInfo 2017: 925-929 - [c139]Ravi Teja Bhupatiraju, Kin Wah Fung, Olivier Bodenreider:
MetaMap Lite in Excel: Biomedical Named-Entity Recognition for Non-Technical Users. MedInfo 2017: 1252 - [c138]Lee B. Peters, Thang Nguyen, Olivier Bodenreider:
Terminology Status APIs - Mapping Obsolete Codes to Current RxNorm, SNOMED CT, and LOINC Concepts. MedInfo 2017: 1333 - 2016
- [j38]Anika Oellrich, Nigel Collier, Tudor Groza, Dietrich Rebholz-Schuhmann, Nigam Shah, Olivier Bodenreider, Mary Regina Boland, Ivo I. Georgiev, Hongfang Liu, Kevin M. Livingston, Augustin Luna, Ann-Marie Mallon, Prashanti Manda, Peter N. Robinson, Gabriella Rustici, Michelle Simon, Liqin Wang, Rainer Winnenburg, Michel Dumontier:
The digital revolution in phenotyping. Briefings Bioinform. 17(5): 819-830 (2016) - [j37]Ferdinand Dhombres, Olivier Bodenreider:
Interoperability between phenotypes in research and healthcare terminologies - Investigating partial mappings between HPO and SNOMED CT. J. Biomed. Semant. 7: 3 (2016) - [c137]Ziv Yaniv, Jessica Faruque, Sally E. Howe, Kathel Dunn, David Sharlip, Andrew Bond, Pablo Perillan, Olivier Bodenreider, Michael J. Ackerman, Terry S. Yoo:
The national library of medicine pill image recognition challenge: An initial report. AIPR 2016: 1-9 - [c136]Olivier Bodenreider, Vojtech Huser, Christian G. Reich:
Resources for Analyzing Drug Prescription Datasets. AMIA 2016 - [c135]Olivier Bodenreider, Lee B. Peters:
Characterizing the semantic composition of the UMLS Metathesaurus over time. AMIA 2016 - [c134]Ferdinand Dhombres, Vojtech Huser, Laritza M. Rodriguez, Olivier Bodenreider:
Assessing the potential risk in drug prescriptions during pregnancy. AMIA 2016 - [c133]Vojtech Huser, Olivier Bodenreider:
Exploring the Use of ClinicalTrials.gov Trial Results Data for Pharmacovigilance. AMIA 2016 - [c132]Lee B. Peters, Olivier Bodenreider:
NDC Properties in RxNorm. AMIA 2016 - [c131]Anna Ripple, Alfred Sorbello, Shahrukh Haider, Olivier Bodenreider:
PubMed 'Early Alerts': Towards Better Precision of Literature Searching for Pharmacovigilance Information based on an Assessment of Relevance Feedback. AMIA 2016 - [c130]Mark L. Homer, Nathan P. Palmer, Olivier Bodenreider, Aurel Cami, Laura Chadwick, Kenneth D. Mandl:
The Drug Data to Knowledge Pipeline: Large-Scale Claims Data Classification for Pharmacologic Insight. CRI 2016 - [c129]Olivier Bodenreider:
Identifying Missing Hierarchical Relations in SNOMED CT from Logical Definitions Based on the Lexical Features of Concept Names. ICBO/BioCreative 2016 - [i3]Vinh Nguyen, Jyoti Leeka, Olivier Bodenreider, Amit P. Sheth:
A Formal Graph Model for RDF and Its Implementation. CoRR abs/1606.00480 (2016) - 2015
- [j36]Rainer Winnenburg, Jonathan M. Mortensen, Olivier Bodenreider:
Using description logics to evaluate the consistency of drug-class membership relations in NDF-RT. J. Biomed. Semant. 6: 13 (2015) - [j35]Rainer Winnenburg, Alfred Sorbello, Olivier Bodenreider:
Exploring adverse drug events at the class level. J. Biomed. Semant. 6: 18 (2015) - [j34]Lee B. Peters, Nathan J. Bahr, Olivier Bodenreider:
Evaluating drug-drug interaction information in NDF-RT and DrugBank. J. Biomed. Semant. 6: 19 (2015) - [j33]Delroy Cameron, Ramakanth Kavuluru, Thomas C. Rindflesch, Amit P. Sheth, Krishnaprasad Thirunarayan, Olivier Bodenreider:
Context-driven automatic subgraph creation for literature-based discovery. J. Biomed. Informatics 54: 141-157 (2015) - [j32]Rainer Winnenburg, Alfred Sorbello, Anna Ripple, Rave Harpaz, Joseph M. Tonning, Ana Szarfman, Henry Francis, Olivier Bodenreider:
Leveraging MEDLINE indexing for pharmacovigilance - Inherent limitations and mitigation strategies. J. Biomed. Informatics 57: 425-435 (2015) - [c128]Olivier Bodenreider, Lee B. Peters, Thang Nguyen:
Navigating between Drug Classes and RxNorm Drugs with RxClass. AMIA 2015 - [c127]Thang Nguyen, Lee B. Peters, Olivier Bodenreider:
Finding Similar Drug Classes using RxClass. AMIA 2015 - [c126]Lee B. Peters, Olivier Bodenreider:
Approaches to Supporting the Analysis of Historical Medication Datasets with RxNorm. AMIA 2015 - [c125]Alfred Sorbello, Anna Ripple, Olivier Bodenreider:
PubMed 'Early Alerts': A Pilot Study to Support Prospective Detection of Emerging Adverse Drug Events. AMIA 2015 - [c124]Bastien Rance, Thai Le, Olivier Bodenreider:
Fingerprinting Biomedical Terminologies - Automatic Classification and Visualization of Biomedical Vocabularies through UMLS Semantic Group Profiles. MedInfo 2015: 771-775 - [c123]Ferdinand Dhombres, Rainer Winnenburg, James T. Case, Olivier Bodenreider:
Extending the coverage of phenotypes in SNOMED CT through post-coordination. MedInfo 2015: 795-799 - [c122]Gang Fu, Evan Bolton, Núria Queralt-Rosinach, Laura Inés Furlong, Vinh Nguyen, Amit P. Sheth, Olivier Bodenreider, Michel Dumontier:
Exposing Provenance Metadata Using Different RDF Models. SWAT4LS 2015: 167-176 - [i2]Gang Fu, Evan Bolton, Núria Queralt Rosinach, Laura Inés Furlong, Vinh Nguyen, Amit P. Sheth, Olivier Bodenreider, Michel Dumontier:
Exposing Provenance Metadata Using Different RDF Models. CoRR abs/1509.02822 (2015) - [i1]Vinh Nguyen, Olivier Bodenreider, Krishnaprasad Thirunarayan, Gang Fu, Evan Bolton, Núria Queralt Rosinach, Laura Inés Furlong, Michel Dumontier, Amit P. Sheth:
On Reasoning with RDF Statements about Statements using Singleton Property Triples. CoRR abs/1509.04513 (2015) - 2014
- [j31]Rainer Winnenburg, Olivier Bodenreider:
A framework for assessing the consistency of drug classes across sources. J. Biomed. Semant. 5: 30 (2014) - [c121]Olivier Bodenreider, Laritza Rodriguez:
Analyzing U.S. prescription lists with RxNorm and the ATC/DDD Index. AMIA 2014 - [c120]Kin Wah Fung, Rachel L. Richesson, Olivier Bodenreider:
Coverage of Rare Disease Names in Standard Terminologies and Implications for Patients, Providers, and Research. AMIA 2014 - [c119]Emir Khatipov, Maureen Madden, Pishing Chiang, Philip Chuang, Duc Nguyen, Ivor D'Souza, Rainer Winnenburg, Olivier Bodenreider, Julia L. Skapik, Robert C. McClure, Steven Emrick:
Creating, Maintaining and Publishing Value Sets in the VSAC. AMIA 2014 - [c118]Thang Nguyen, Lee B. Peters, Olivier Bodenreider:
RxClass - Navigating between Drug Classes and RxNorm Drugs. AMIA 2014 - [c117]Laritza Rodriguez, Vojtech Huser, Olivier Bodenreider, James J. Cimino:
Automatic coding of Free-Text Medication Data recorded by Research Coordinators. AMIA 2014 - [c116]Johann Stan, Olivier Bodenreider, Kin Wah Fung, Dina Demner-Fushman:
Facilitating Reconciliation of Inter-Annotator Disagreements. AMIA 2014 - [c115]Rainer Winnenburg, Olivier Bodenreider:
Desiderata for an authoritative Representation of MeSH in RDF. AMIA 2014 - [c114]Guo-Qiang Zhang, Wei Zhu, Mengmeng Sun, Shiqiang Tao, Olivier Bodenreider, Licong Cui:
MaPLE: A MapReduce Pipeline for Lattice-based Evaluation and its application to SNOMED CT. IEEE BigData 2014: 754-759 - [c113]Rachel L. Richesson, Kin Wah Fung, Olivier Bodenreider:
Coverage of Rare Disease Names in Clinical Coding Systems and Ontologies and Implications for Electronic Health Records-Based Research. ICBO 2014: 78-80 - [c112]Olivier Bodenreider, Lee B. Peters, Thang Nguyen:
RxClass - Navigating between Drug Classes and RxNorm Drugs. ICBO 2014: 106-107 - [c111]Vinh Nguyen, Olivier Bodenreider, Amit P. Sheth:
Don't like RDF reification?: making statements about statements using singleton property. WWW 2014: 759-770 - 2013
- [j30]Delroy Cameron, Olivier Bodenreider, Hima Yalamanchili, Tu Danh, Sreeram Vallabhaneni, Krishnaprasad Thirunarayan, Amit P. Sheth, Thomas C. Rindflesch:
A graph-based recovery and decomposition of Swanson's hypothesis using semantic predications. J. Biomed. Informatics 46(2): 238-251 (2013) - [c110]Steven Emrick, Duc Nguyen, Pishing Chiang, Philip Chuang, Maureen Madden, Rainer Winnenburg, Robert C. McClure, Ivor D'Souza, Olivier Bodenreider:
The NLM Value Set Authority Center at 1 year. AMIA 2013 - [c109]Thai Le, Bastien Rance, Olivier Bodenreider:
Network Visualization of UMLS Source Vocabularies using Semantic Groups. AMIA 2013 - [c108]Lee B. Peters, Thang Nguyen, Olivier Bodenreider:
Displaying Drug Classes in RxNav. AMIA 2013 - [c107]Rainer Winnenburg, Olivier Bodenreider:
Metrics for assessing the quality of value sets in clinical quality measures. AMIA 2013 - [c106]Olivier Bodenreider:
Multi-lingual Features of the Unified Medical Language System. CLEF (Working Notes) 2013 - [c105]Rainer Winnenburg, Laritza Rodriguez, Fiona M. Callaghan, Alfred Sorbello, Ana Szarfman, Olivier Bodenreider:
Aligning Pharmacologic Classes Between MeSH and ATC. VDOS+DO@ICBO 2013 - [c104]Bastien Rance, Michelle Snyder, Janine Lewis, Olivier Bodenreider:
Leveraging Terminological Resources for Mapping between Rare Disease Information Sources. MedInfo 2013: 529-533 - [c103]Lee B. Peters, Jonathan Mortensen, Thang Nguyen, Olivier Bodenreider:
Enabling Complex Queries to Drug Information Sources through Functional Composition. MedInfo 2013: 692-696 - [c102]Rainer Winnenburg, Olivier Bodenreider:
Exploring Pharmacoepidemiologic Groupings of Drugs from a Clinical Perspective. MedInfo 2013: 827-831 - [c101]László Balkányi, Stefan Schulz, Ronald Cornet, Olivier Bodenreider:
Medical Concept Representation: The Years Beyond 2000. MedInfo 2013: 1011 - [c100]Olivier Bodenreider, Duc Nguyen, Pishing Chiang, Philip Chuang, Maureen Madden, Rainer Winnenburg, Robert C. McClure, Steven Emrick, Ivor D'Souza:
The NLM Value Set Authority Center. MedInfo 2013: 1224 - 2012
- [j29]Natalia Grabar, Thierry Hamon, Olivier Bodenreider:
Ontologies and terminologies: Continuum or dichotomy? Appl. Ontology 7(4): 375-386 (2012) - [j28]Bastien Rance, Emily Doughty, Dina Demner-Fushman, Maricel G. Kann, Olivier Bodenreider:
A mutation-centric approach to identifying pharmacogenomic relations in text. J. Biomed. Informatics 45(5): 835-841 (2012) - [c99]Tomasz Adamusiak, Olivier Bodenreider:
Quality Assurance in LOINC using Description Logic. AMIA 2012 - [c98]Lee B. Peters, Olivier Bodenreider, Thang Nguyen:
RxBatch - Batch Operations for RxNorm and NDF-RT APIs. AMIA 2012 - [c97]Rainer Winnenburg, Olivier Bodenreider:
Issues in Creating and Maintaining Value Sets for Clinical Quality Measures. AMIA 2012 - [c96]Fleur Mougin, Anita Burgun, Olivier Bodenreider:
Comparing drug-class membership in ATC and NDF-RT. IHI 2012: 437-444 - [e3]Olivier Bodenreider, Bastien Rance:
Data Integration in the Life Sciences - 8th International Conference, DILS 2012, College Park, MD, USA, June 28-29, 2012. Proceedings. Lecture Notes in Computer Science 7348, Springer 2012, ISBN 978-3-642-31039-3 [contents] - [e2]Olivier Bodenreider, Maryann E. Martone, Alan Ruttenberg:
Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY, USA, July 26-30, 2011. CEUR Workshop Proceedings 833, CEUR-WS.org 2012 [contents] - 2011
- [j27]Emily Doughty, Attila Kertész-Farkas, Olivier Bodenreider, Gary Thompson, Asa Adadey, Thomas A. Peterson, Maricel G. Kann:
Toward an automatic method for extracting cancer- and other disease-related point mutations from the biomedical literature. Bioinform. 27(3): 408-415 (2011) - [j26]Joanne S. Luciano, Bosse Andersson, Colin R. Batchelor, Olivier Bodenreider, Tim Clark, Christine K. Denney, Christopher Domarew, Thomas Gambet, Lee Harland, Anja Jentzsch, Vipul Kashyap, Peter J. Kos, Julia Kozlovsky, Timothy Lebo, M. Scott Marshall, Jamie P. McCusker, Deborah L. McGuinness, Chimezie Ogbuji, Elgar Pichler, Robert L. Powers, Eric Prud'hommeaux, Matthias Samwald, Lynn M. Schriml, Peter J. Tonellato, Patricia L. Whetzel, Jun Zhao, Susie Stephens, Michel Dumontier:
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside. J. Biomed. Semant. 2(S-2): S1 (2011) - [j25]Satya Sanket Sahoo, Vinh Nguyen, Olivier Bodenreider, Priti Parikh, Todd Minning, Amit P. Sheth:
A unified framework for managing provenance information in translational research. BMC Bioinform. 12: 461 (2011) - [c95]Delroy Cameron, Ramakanth Kavuluru, Olivier Bodenreider, Pablo N. Mendes, Amit P. Sheth, Krishnaprasad Thirunarayan:
Semantic Predications for Complex Information Needs in Biomedical Literature. BIBM 2011: 512-519 - [c94]Vinh Nguyen, Olivier Bodenreider, Todd Minning, Amit P. Sheth:
The Knowledge-driven Exploration of Integrated Biomedical Knowledge Sources Facilitates the Generation of New Hypotheses. LISC 2011 - 2010
- [j24]James G. Mork, Olivier Bodenreider, Dina Demner-Fushman, Rezarta Islamaj Dogan, François-Michel Lang, Zhiyong Lu, Aurélie Névéol, Lee B. Peters, Sonya E. Shooshan, Alan R. Aronson:
Extracting Rx information from clinical narrative. J. Am. Medical Informatics Assoc. 17(5): 536-539 (2010) - [j23]Jyotishman Pathak, Lee B. Peters, Christopher G. Chute, Olivier Bodenreider:
Comparing and evaluating terminology services application programming interfaces: RxNav, UMLSKS and LexBIG. J. Am. Medical Informatics Assoc. 17(6): 714-719 (2010) - [c93]