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Zaid Al-Ars
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2020 – today
- 2023
- [i27]Seongyeon Park, Hajin Kim, Tanveer Ahmad, Nauman Ahmed, Zaid Al-Ars, H. Peter Hofstee, Youngsok Kim, Jinho Lee:
SaLoBa: Maximizing Data Locality and Workload Balance for Fast Sequence Alignment on GPUs. CoRR abs/2301.09310 (2023) - 2022
- [j26]Lukas Breitwieser
, Ahmad Hesam, Jean de Montigny
, Vasileios Vavourakis
, Alexandros Iosif, Jack Jennings, Marcus Kaiser
, Marco Manca
, Alberto Di Meglio, Zaid Al-Ars, Fons Rademakers, Onur Mutlu, Roman Bauer:
BioDynaMo: a modular platform for high-performance agent-based simulation. Bioinform. 38(2): 453-460 (2022) - [c120]Aritra Sarkar
, Zaid Al-Ars
, Koen Bertels
:
QKSA: Quantum Knowledge Seeking Agent. AGI 2022: 384-393 - [c119]Baozhou Zhu, H. Peter Hofstee, Jinho Lee, Zaid Al-Ars:
Improving Gradient Paths for Binary Convolutional Neural Networks. BMVC 2022: 281 - [c118]David Enthoven, Zaid Al-Ars:
Fidel: Reconstructing Private Training Samples from Weight Updates in Federated Learning. IOTSMS 2022: 1-8 - [c117]Robin Abrahamse, Ákos Hadnagy, Zaid Al-Ars:
Memory-Disaggregated In-Memory Object Store Framework for Big Data Applications. IPDPS Workshops 2022: 1-7 - [c116]Seongyeon Park, Hajin Kim, Tanveer Ahmad, Nauman Ahmed, Zaid Al-Ars, H. Peter Hofstee, Youngsok Kim, Jinho Lee:
SALoBa: Maximizing Data Locality and Workload Balance for Fast Sequence Alignment on GPUs. IPDPS 2022: 728-738 - [c115]Tanveer Ahmad, Chengxin Ma, Zaid Al-Ars, H. Peter Hofstee:
Communication-Efficient Cluster Scalable Genomics Data Processing Using Apache Arrow Flight. ISPDC 2022: 138-146 - [i26]C. V. Vletter, H. L. Burger, Hani Alers, N. Sourlos, Zaid Al-Ars:
Towards an Automatic Diagnosis of Peripheral and Central Palsy Using Machine Learning on Facial Features. CoRR abs/2201.11852 (2022) - [i25]Tanveer Ahmad, Zaid Al-Ars, H. Peter Hofstee:
Benchmarking Apache Arrow Flight - A wire-speed protocol for data transfer, querying and microservices. CoRR abs/2204.03032 (2022) - [i24]Robin Abrahamse, Ákos Hadnagy, Zaid Al-Ars:
Memory-Disaggregated In-Memory Object Store Framework for Big Data Applications. CoRR abs/2204.12889 (2022) - [i23]Huub Donkers, Koen Mesman, Zaid Al-Ars, Matthias Möller:
QPack Scores: Quantitative performance metrics for application-oriented quantum computer benchmarking. CoRR abs/2205.12142 (2022) - [i22]Yongding Tian, Matthijs A. Reukers, Zaid Al-Ars, H. Peter Hofstee, Matthijs Brobbel, Johan Peltenburg, Jeroen van Straten:
Tydi-lang: A Language for Typed Streaming Hardware. CoRR abs/2212.06259 (2022) - [i21]Yongding Tian, Zaid Al-Ars, H. Peter Hofstee:
Tydi-lang: a language for typed streaming hardware - A manual for future Tydi-lang compiler developers. CoRR abs/2212.11154 (2022) - [i20]Matthijs A. Reukers, H. Peter Hofstee, Zaid Al-Ars:
A Toolchain for Streaming Dataflow Accelerator Designs for Big Data Analytics: Defining an IR for Composable Typed Streaming Dataflow Designs. CoRR abs/2212.12003 (2022) - 2021
- [j25]Johan Peltenburg
, Jeroen van Straten, Matthijs Brobbel, Zaid Al-Ars, H. Peter Hofstee:
Generating High-Performance FPGA Accelerator Designs for Big Data Analytics with Fletcher and Apache Arrow. J. Signal Process. Syst. 93(5): 565-586 (2021) - [c114]Johan Peltenburg, Ákos Hadnagy, Matthijs Brobbel, Robert Morrow, Zaid Al-Ars:
Tens of gigabytes per second JSON-to-Arrow conversion with FPGA accelerators. FPT 2021: 1-9 - [c113]Baozhou Zhu, H. Peter Hofstee, Jinho Lee, Zaid Al-Ars:
An Attention Module for Convolutional Neural Networks. ICANN (1) 2021: 167-178 - [c112]Joost Hoozemans, Kati Tervo
, Pekka Jääskeläinen
, Zaid Al-Ars:
Energy Efficient Multistandard Decompressor ASIP. ICCDE 2021: 14-19 - [c111]Baozhou Zhu, H. Peter Hofstee, Johan Peltenburg, Jinho Lee, Zaid Al-Ars:
AutoReCon: Neural Architecture Search-based Reconstruction for Data-free Compression. IJCAI 2021: 3470-3476 - [c110]Jianyu Chen, Maurice Daverveldt, Zaid Al-Ars:
FPGA Acceleration of Zstd Compression Algorithm. IPDPS Workshops 2021: 188-191 - [c109]Ahmad Hesam, Lukas Breitwieser
, Fons Rademakers, Zaid Al-Ars:
GPU Acceleration of 3D Agent-Based Biological Simulations. IPDPS Workshops 2021: 210-217 - [c108]Petros Arvanitis
, Jan-Harm L. F. Betting
, Laurens W. J. Bosman
, Zaid Al-Ars
, Christos Strydis
:
WhiskEras 2.0: Fast and Accurate Whisker Tracking in Rodents. SAMOS 2021: 210-225 - [i19]David Enthoven, Zaid Al-Ars:
Fidel: Reconstructing Private Training Samples from Weight Updates in Federated Learning. CoRR abs/2101.00159 (2021) - [i18]A. M. Krol, Aritra Sarkar, Imran Ashraf, Zaid Al-Ars, Koen Bertels:
Efficient decomposition of unitary matrices in quantum circuit compilers. CoRR abs/2101.02993 (2021) - [i17]Koen Mesman, Zaid Al-Ars, Matthias Möller:
QPack: Quantum Approximate Optimization Algorithms as universal benchmark for quantum computers. CoRR abs/2103.17193 (2021) - [i16]Ahmad Hesam, Lukas Breitwieser, Fons Rademakers, Zaid Al-Ars:
GPU Acceleration of 3D Agent-Based Biological Simulations. CoRR abs/2105.00039 (2021) - [i15]Baozhou Zhu, H. Peter Hofstee, Johan Peltenburg, Jinho Lee, Zaid Al-Ars:
AutoReCon: Neural Architecture Search-based Reconstruction for Data-free Compression. CoRR abs/2105.12151 (2021) - [i14]Baozhou Zhu, H. Peter Hofstee, Jinho Lee, Zaid Al-Ars:
An Attention Module for Convolutional Neural Networks. CoRR abs/2108.08205 (2021) - [i13]Yongding Tian, Zhuoran Guo, Jiaxuan Zhang, Zaid Al-Ars:
DFL: High-Performance Blockchain-Based Federated Learning. CoRR abs/2110.15457 (2021) - [i12]Aritra Sarkar, Zaid Al-Ars, Harshitta Gandhi, Koen Bertels:
QKSA: Quantum Knowledge Seeking Agent - resource-optimized reinforcement learning using quantum process tomography. CoRR abs/2112.03643 (2021) - 2020
- [j24]Rene Miedema
, Georgios Smaragdos, Mario Negrello, Zaid Al-Ars, Matthias Möller, Christos Strydis:
flexHH: A Flexible Hardware Library for Hodgkin-Huxley-Based Neural Simulations. IEEE Access 8: 121905-121919 (2020) - [j23]Baozhou Zhu
, Zaid Al-Ars
, H. Peter Hofstee
:
REAF: Reducing Approximation of Channels by Reducing Feature Reuse Within Convolution. IEEE Access 8: 169957-169965 (2020) - [j22]Nauman Ahmed, Tong Dong Qiu, Koen Bertels, Zaid Al-Ars:
GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads. BMC Bioinform. 21-S(13): 388 (2020) - [j21]Tanveer Ahmad, Nauman Ahmed, Zaid Al-Ars, H. Peter Hofstee:
Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework. BMC Genom. 21(S-10) (2020) - [j20]Johan Peltenburg, Jeroen van Straten, Matthijs Brobbel, Zaid Al-Ars, H. Peter Hofstee:
Tydi: An Open Specification for Complex Data Structures Over Hardware Streams. IEEE Micro 40(4): 120-130 (2020) - [j19]Michiel A. van der Vlag
, Georgios Smaragdos, Zaid Al-Ars, Christos Strydis:
Exploring Complex Brain-Simulation Workloads on Multi-GPU Deployments. ACM Trans. Archit. Code Optim. 16(4): 53:1-53:25 (2020) - [j18]Jian Fang
, Jianyu Chen, Jinho Lee, Zaid Al-Ars, H. Peter Hofstee:
An Efficient High-Throughput LZ77-Based Decompressor in Reconfigurable Logic. J. Signal Process. Syst. 92(9): 931-947 (2020) - [c107]Luigi Pomante, Francesca Palumbo
, Claudia Rinaldi, Giacomo Valente, Carlo Sau, Tiziana Fanni
, Frank van der Linden, Twan Basten, Marc Geilen
, Geran Peeren, Jirí Kadlec, Pekka Jääskeläinen
, Marcos Martinez de Alejandro, Jukka Saarinen, Tero Säntti, Maria Katiuscia Zedda, Victor Sanchez, Dip Goswami, Zaid Al-Ars, Ad de Beer:
Design and management of image processing pipelines within CPS: 2 years of experience from the FitOptiVis ECSEL Project. DSD 2020: 378-385 - [c106]Baozhou Zhu, Zaid Al-Ars, Wei Pan:
Towards Lossless Binary Convolutional Neural Networks Using Piecewise Approximation. ECAI 2020: 1730-1737 - [c105]Rene Miedema, Georgios Smaragdos, Mario Negrello, Zaid Al-Ars, Matthias Möller, Christos Strydis:
Synthesis-Free, Flexible and Fast Hardware Library for Biophysically Plausible Neurosimulations. FPGA 2020: 319 - [c104]Johan Peltenburg, Lars T. J. van Leeuwen, Joost Hoozemans, Jian Fang
, Zaid Al-Ars, H. Peter Hofstee:
Battling the CPU Bottleneck in Apache Parquet to Arrow Conversion Using FPGA. FPT 2020: 281-286 - [c103]Baozhou Zhu, Zaid Al-Ars, H. Peter Hofstee:
NASB: Neural Architecture Search for Binary Convolutional Neural Networks. IJCNN 2020: 1-8 - [c102]Jan-Harm L. F. Betting, Vincenzo Romano, Laurens W. J. Bosman, Zaid Al-Ars, Chris I. De Zeeuw, Christos Strydis:
Stairway to Abstraction: an Iterative Algorithm for Whisker Detection in Video Frames. LASCAS 2020: 1-4 - [c101]Lennart Noordsij, Steven van der Vlugt, Mohamed A. Bamakhrama, Zaid Al-Ars, Peter Lindstrom
:
Parallelization of Variable Rate Decompression through Metadata. PDP 2020: 245-252 - [i11]David Enthoven, Zaid Al-Ars:
An Overview of Federated Deep Learning Privacy Attacks and Defensive Strategies. CoRR abs/2004.04676 (2020) - [i10]Aritra Sarkar, Zaid Al-Ars, Koen Bertels:
QuASeR - Quantum Accelerated De Novo DNA Sequence Reconstruction. CoRR abs/2004.05078 (2020) - [i9]Paul Bakker, Henk-Jan Boele, Zaid Al-Ars, Christos Strydis:
Real-Time Face and Landmark Localization for Eyeblink Detection. CoRR abs/2006.00816 (2020) - [i8]Aritra Sarkar
, Zaid Al-Ars, Koen Bertels:
Quantum Accelerated Estimation of Algorithmic Information. CoRR abs/2006.00987 (2020) - [i7]Lukas Breitwieser, Ahmad Hesam, Jean de Montigny, Vasileios Vavourakis, Alexandros Iosif, Jack Jennings, Marcus Kaiser, Marco Manca, Alberto Di Meglio, Zaid Al-Ars, Fons Rademakers, Onur Mutlu, Roman Bauer:
BioDynaMo: an agent-based simulation platform for scalable computational biology research. CoRR abs/2006.06775 (2020) - [i6]Baozhou Zhu, Zaid Al-Ars, H. Peter Hofstee:
NASB: Neural Architecture Search for Binary Convolutional Neural Networks. CoRR abs/2008.03515 (2020) - [i5]Baozhou Zhu, Zaid Al-Ars, Wei Pan:
Towards Lossless Binary Convolutional Neural Networks Using Piecewise Approximation. CoRR abs/2008.03520 (2020) - [i4]Baozhou Zhu, H. Peter Hofstee, Jinho Lee, Zaid Al-Ars:
SoFAr: Shortcut-based Fractal Architectures for Binary Convolutional Neural Networks. CoRR abs/2009.05317 (2020) - [i3]Stefan Zwaard, Henk-Jan Boele, Hani Alers, Christos Strydis, Casey Lew-Williams, Zaid Al-Ars:
Privacy-Preserving Object Detection & Localization Using Distributed Machine Learning: A Case Study of Infant Eyeblink Conditioning. CoRR abs/2010.07259 (2020)
2010 – 2019
- 2019
- [j17]Nauman Ahmed, Jonathan Levy, Shanshan Ren, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars:
GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data. BMC Bioinform. 20(1): 520:1-520:20 (2019) - [j16]Nauman Ahmed, Jonathan Levy, Shanshan Ren, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars:
Correction to: GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data. BMC Bioinform. 20(1): 597:1-597:4 (2019) - [j15]Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
GPU accelerated sequence alignment with traceback for GATK HaplotypeCaller. BMC Genom. 20(S2) (2019) - [j14]Mahroo Zandrahimi
, Philippe Debaud, Armand Castillejo, Zaid Al-Ars:
Evaluation of the Impact of Technology Scaling on Delay Testing for Low-Cost AVS. J. Electron. Test. 35(3): 303-315 (2019) - [j13]Zaid Al-Ars, Steven van der Vlugt, Pekka Jääskeläinen
, Frank van der Linden:
ALMARVI System Solution for Image and Video Processing in Healthcare, Surveillance and Mobile Applications. J. Signal Process. Syst. 91(1): 1-7 (2019) - [j12]Joost Hoozemans
, Rob de Jong, Steven van der Vlugt, Jeroen van Straten, Uttam Kumar Elango, Zaid Al-Ars:
Frame-based Programming, Stream-Based Processing for Medical Image Processing Applications. J. Signal Process. Syst. 91(1): 47-59 (2019) - [j11]Joost Hoozemans
, Jeroen van Straten, Timo Viitanen, Aleksi Tervo
, Jiri Kadlec, Zaid Al-Ars:
ALMARVI Execution Platform: Heterogeneous Video Processing SoC Platform on FPGA. J. Signal Process. Syst. 91(1): 61-73 (2019) - [c100]Johan Peltenburg, Jeroen van Straten
, Matthijs Brobbel, H. Peter Hofstee, Zaid Al-Ars:
Supporting Columnar In-memory Formats on FPGA: The Hardware Design of Fletcher for Apache Arrow. ARC 2019: 32-47 - [c99]Jian Fang
, Jianyu Chen, Jinho Lee, Zaid Al-Ars, H. Peter Hofstee:
Refine and Recycle: A Method to Increase Decompression Parallelism. ASAP 2019: 272-280 - [c98]Zaid Al-Ars, Twan Basten, Ad de Beer, Marc Geilen
, Dip Goswami, Pekka Jääskeläinen
, Jirí Kadlec, Marcos Martinez de Alejandro, Francesca Palumbo
, Geran Peeren, Luigi Pomante
, Frank van der Linden, Jukka Saarinen, Tero Säntti, Carlo Sau, Maria Katiuscia Zedda:
The FitOptiVis ECSEL project: highly efficient distributed embedded image/video processing in cyber-physical systems. CF 2019: 333-338 - [c97]Jian Fang
, Jianyu Chen, Jinho Lee, Zaid Al-Ars, H. Peter Hofstee:
A Fine-Grained Parallel Snappy Decompressor for FPGAs Using a Relaxed Execution Model. FCCM 2019: 335 - [c96]Johan Peltenburg, Jeroen van Straten
, Lars Wijtemans, Lars van Leeuwen, Zaid Al-Ars, H. Peter Hofstee:
Fletcher: A Framework to Efficiently Integrate FPGA Accelerators with Apache Arrow. FPL 2019: 270-277 - [i2]Aritra Sarkar
, Zaid Al-Ars, Carmen G. Almudéver
, Koen Bertels:
An algorithm for DNA read alignment on quantum accelerators. CoRR abs/1909.05563 (2019) - 2018
- [j10]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths. Comput. Biol. Chem. 75: 54-64 (2018) - [c95]Joost Hoozemans, Jeroen van Straten, Zaid Al-Ars, Stephan Wong:
Evaluating Auto-adaptation Methods for Fine-Grained Adaptable Processors. ARCS 2018: 255-268 - [c94]Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
An Efficient GPU-Based de Bruijn Graph Construction Algorithm for Micro-Assembly. BIBE 2018: 67-72 - [c93]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM. BIBE 2018: 243-246 - [c92]Jian Fang
, Jianyu Chen, Zaid Al-Ars, H. Peter Hofstee, Jan Hidders:
A high-bandwidth snappy decompressor in reconfigurable logic: work-in-progress. CODES+ISSS 2018: 16 - [c91]Mahroo Zandrahimi, Philippe Debaud, Armand Castillejo, Zaid Al-Ars:
Industrial evaluation of transition fault testing for cost effective offline adaptive voltage scaling. DATE 2018: 289-292 - [c90]Mahroo Zandrahimi, Philippe Debaud, Armand Castillejo, Zaid Al-Ars:
An industrial case study of low cost adaptive voltage scaling using delay test patterns. DATE 2018: 999-1000 - [c89]Mahroo Zandrahimi, Philippe Debaud, Armand Castillejo, Zaid Al-Ars:
Cost Effective Adaptive Voltage Scaling Using Path Delay Fault Testing. EWDTS 2018: 1-6 - [c88]Parag Bhosale, Marius Staring
, Zaid Al-Ars, Floris F. Berendsen:
GPU-based stochastic-gradient optimization for non-rigid medical image registration in time-critical applications. Medical Imaging: Image Processing 2018: 105740R - [c87]Nagarajan Kathiresan, Rashid Al-Ali, Puthen V. Jithesh
, Ganesan Narayanasamy, Zaid Al-Ars:
Porting and Benchmarking of BWAKIT Pipeline on OpenPOWER Architecture. ISC Workshops 2018: 402-410 - 2017
- [c86]Joost Hoozemans, Rolf Heij, Jeroen van Straten
, Zaid Al-Ars:
VLIW-Based FPGA Computation Fabric with Streaming Memory Hierarchy for Medical Imaging Applications. ARC 2017: 36-43 - [c85]Hamid Mushtaq, Frank Liu, Carlos Costa, Gang Liu, H. Peter Hofstee, Zaid Al-Ars:
SparkGA: A Spark Framework for Cost Effective, Fast and Accurate DNA Analysis at Scale. BCB 2017: 148-157 - [c84]Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
Predictive Genome Analysis Using Partial DNA Sequencing Data. BIBE 2017: 119-124 - [c83]Hamid Mushtaq, Nauman Ahmed, Zaid Al-Ars:
Streaming Distributed DNA Sequence Alignment Using Apache Spark. BIBE 2017: 188-193 - [c82]Ernst Houtgast, Vlad Mihai Sima, Zaid Al-Ars:
High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL. BIBE 2017: 492-496 - [c81]Shanshan Ren, Koen Bertels, Zaid Al-Ars:
GPU-Accelerated GATK HaplotypeCaller with Load-Balanced Multi-Process Optimization. BIBE 2017: 497-502 - [c80]Nauman Ahmed, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars:
GPU accelerated API for alignment of genomics sequencing data. BIBM 2017: 510-515 - [c79]Mahroo Zandrahimi, Philippe Debaud, Armand Castillejo, Zaid Al-Ars:
Using transition fault test patterns for cost effective offline performance estimation. DTIS 2017: 1-5 - [c78]Yang Ma, Prajith Ramakrishnan Geethakumari, Georgios Smaragdos, Sander Lindeman
, Vincenzo Romano
, Mario Negrello, Ioannis Sourdis, Laurens W. J. Bosman, Chris I. De Zeeuw, Zaid Al-Ars, Christos Strydis:
Towards real-time whisker tracking in rodents for studying sensorimotor disorders. SAMOS 2017: 137-145 - [c77]Johan Peltenburg, Ahmad Hesam, Zaid Al-Ars:
Pushing Big Data into Accelerators: Can the JVM Saturate Our Hardware? ISC Workshops 2017: 220-236 - 2016
- [j9]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
An Efficient GPUAccelerated Implementation of Genomic Short Read Mapping with BWAMEM. SIGARCH Comput. Archit. News 44(4): 38-43 (2016) - [c76]Ernst Joachim Houtgast, Vlad Mihai Sima
, Koen Bertels, Zaid Al-Ars:
GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing. ARCS 2016: 130-142 - [c75]Valery Kritchallo, Billy Braithwaite, Erik Vermij, Koen Bertels, Zaid Al-Ars:
Balancing High-Performance Parallelization and Accuracy in Canny Edge Detector. ARCS 2016: 251-262 - [c74]Johan Peltenburg, Shanshan Ren, Zaid Al-Ars:
Maximizing systolic array efficiency to accelerate the PairHMM Forward Algorithm. BIBM 2016: 758-762 - [c73]Shanshan Ren, Koen Bertels, Zaid Al-Ars:
Exploration of alternative GPU implementations of the pair-HMMs forward algorithm. BIBM 2016: 902-909 - [c72]Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
A comparison of seed-and-extend techniques in modern DNA read alignment algorithms. BIBM 2016: 1421-1428 - [c71]Mahroo Zandrahimi, Zaid Al-Ars, Philippe Debaud, Armand Castillejo:
Challenges of using on-chip performance monitors for process and environmental variation compensation. DATE 2016: 1018-1019 - [c70]Ernst Joachim Houtgast, Vlad Mihai Sima
, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars:
Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms. FCCM 2016: 28 - [c69]Mahroo Zandrahimi, Philippe Debaud, Armand Castillejo, Zaid Al-Ars:
Industrial approaches for performance evaluation using on-chip monitors. IDT 2016: 210-215 - [c68]Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars:
Power-efficiency analysis of accelerated BWA-MEM implementations on heterogeneous computing platforms. ReConFig 2016: 1-8 - [i1]Georgios Smaragdos, Georgios Chatzikonstantis, Rahul Kukreja, Harry Sidiropoulos, Dimitrios Rodopoulos, Ioannis Sourdis, Zaid Al-Ars, Christoforos Kachris, Dimitrios Soudris, Chris I. De Zeeuw, Christos Strydis:
BrainFrame: A node-level heterogeneous accelerator platform for neuron simulations. CoRR abs/1612.01501 (2016) - 2015
- [c67]Cuong Pham-Quoc
, Imran Ashraf, Zaid Al-Ars, Koen Bertels:
Heterogeneous Hardware Accelerators with Hybrid Interconnect: An Automated Design Approach. ACOMP 2015: 59-66 - [c66]Shanshan Ren, Vlad Mihai Sima
, Zaid Al-Ars:
FPGA acceleration of the pair-HMMs forward algorithm for DNA sequence analysis. BIBM 2015: 1465-1470 - [c65]Hamid Mushtaq, Zaid Al-Ars:
Cluster-based Apache Spark implementation of the GATK DNA analysis pipeline. BIBM 2015: 1471-1477 - [c64]Hoang Anh Du Nguyen, Zaid Al-Ars, Georgios Smaragdos, Christos Strydis:
Accelerating complex brain-model simulations on GPU platforms. DATE 2015: 974-979 - [c63]Nauman Ahmed, Vlad Mihai Sima
, Ernst Houtgast, Koen Bertels, Zaid Al-Ars:
Heterogeneous Hardware/Software Acceleration of the BWA-MEM DNA Alignment Algorithm. ICCAD 2015: 240-246 - [c62]Hamid Mushtaq, Zaid Al-Ars, Koen Bertels:
Calculation of worst-case execution time for multicore processors using deterministic execution. PATMOS 2015: 33-39 - [c61]Ernst Joachim Houtgast, Vlad Mihai Sima
, Koen Bertels, Zaid Al-Ars:
An FPGA-based systolic array to accelerate the BWA-MEM genomic mapping algorithm. SAMOS 2015: 221-227 - [c60]Joost Hoozemans, Stephan Wong, Zaid Al-Ars:
Using VLIW softcore processors for image processing applications. SAMOS 2015: 315-318 - [c59]Zaid Al-Ars, Hamid Mushtaq:
Scalability Potential of BWA DNA Mapping Algorithm on Apache Spark. SIMBig 2015: 85-88 - 2014
- [j8]Hamid Mushtaq, Zaid Al-Ars, Koen Bertels:
Efficent and highly portable deterministic multithreading (DetLock). Computing 96(12): 1131-1147 (2014) - [c58]Mahroo Zandrahimi, Zaid Al-Ars:
A Survey on Low-Power Techniques for Single and Multicore Systems. ICCASA 2014: 69-74 - [c57]Cuong Pham-Quoc
, Zaid Al-Ars, Koen Bertels:
Automated Hybrid Interconnect Design for FPGA Accelerators Using Data Communication Profiling. IPDPS Workshops 2014: 151-160 - 2013
- [c56]Cuong Pham-Quoc
, Zaid Al-Ars, Koen Bertels:
Heterogeneous hardware accelerators interconnect: An overview. AHS 2013: 189-197 - [c55]Cuong Pham-Quoc, Jan Heisswolf, Stephan Werner, Zaid Al-Ars, Jürgen Becker
, Koen Bertels:
Hybrid interconnect design for heterogeneous hardware accelerators. DATE 2013: 843-846 - [c54]Hamid Mushtaq, Zaid Al-Ars, Koen Bertels:
Efficient software-based fault tolerance approach on multicore platforms. DATE 2013: 921-926 - [c53]Sohaib Majzoub
, Zaid Al-Ars, Said Hamdioui:
Reducing random-dopant fluctuation impact on core-speed and power variability in many-core platforms. IDT 2013: 1-6 - [c52]