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ORCIDMarta Kasprzak
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- affiliation: Poznan University of Technology, Poland
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2020 – today
- 2024
[j34]Pawel Wojciechowski
, Marta Kasprzak:
Assignment of tasks to machines under data replication with a tie to Steiner systems. Int. J. Appl. Math. Comput. Sci. 34(2) (2024)- [j33]Marta Kasprzak:
Beyond Quasi-Adjoint Graphs: On Polynomial-Time Solvable Cases of the Hamiltonian Cycle and Path Problems. Informatica 35(4): 807-816 (2024) - 2021
- [j32]Sylwester Swat, Artur Laskowski, Jan Badura, Wojciech Frohmberg, Pawel Wojciechowski, Aleksandra Swiercz, Marta Kasprzak, Jacek Blazewicz:
Genome-scale de novo assembly using ALGA. Bioinform. 37(12): 1644-1651 (2021) - [c6]Sylwester Swat, Marta Kasprzak:
A Heuristic Approach to the Treedepth Decomposition Problem for Large Graphs. WG 2021: 169-181
2010 – 2019
- 2018
- [j31]Marta Kasprzak:
Classification of de Bruijn-based labeled digraphs. Discret. Appl. Math. 234: 86-92 (2018) - [j30]Jacek Blazewicz, Marta Kasprzak, Michal Kierzynka, Wojciech Frohmberg, Aleksandra Swiercz, Pawel Wojciechowski, Piotr Zurkowski:
Graph algorithms for DNA sequencing - origins, current models and the future. Eur. J. Oper. Res. 264(3): 799-812 (2018) - 2017
- [j29]Agnieszka Rybarczyk, Alain Hertz, Marta Kasprzak, Jacek Blazewicz:
Tabu Search for the RNA Partial Degradation Problem. Int. J. Appl. Math. Comput. Sci. 27(2): 401 (2017) - 2016
- [j28]Maciej Antczak, Marta Kasprzak, Piotr Lukasiak, Jacek Blazewicz:
Structural alignment of protein descriptors - a combinatorial model. BMC Bioinform. 17: 383 (2016) - [j27]Marek Chlopkowski, Maciej Antczak, Michal Slusarczyk, Aleksander Wdowinski, Michal Zajaczkowski, Marta Kasprzak:
High-order statistical compressor for long-term storage of DNA sequencing data. RAIRO Oper. Res. 50(2): 351-361 (2016) - 2012
- [j26]Jacek Blazewicz, Marta Kasprzak:
Reduced-by-matching Graphs: Toward Simplifying Hamiltonian Circuit Problem. Fundam. Informaticae 118(3): 225-244 (2012) - [j25]Jacek Blazewicz, Marta Kasprzak:
Complexity Issues in Computational Biology. Fundam. Informaticae 118(4): 385-401 (2012) - 2011
- [j24]Jacek Blazewicz, Edmund K. Burke, Marta Kasprzak, Alexandr Kovalev, Mikhail Y. Kovalyov:
The simplified partial digest problem: Approximation and a graph-theoretic model. Eur. J. Oper. Res. 208(2): 142-152 (2011) - [j23]Jacek Blazewicz, Marek Figlerowicz, Marta Kasprzak, Martyna Nowacka, Agnieszka Rybarczyk:
RNA Partial Degradation Problem: Motivation, Complexity, Algorithm. J. Comput. Biol. 18(6): 821-834 (2011) - [c5]Jacek Blazewicz, Bartosz Bosak, Piotr Gawron, Marta Kasprzak, Krzysztof Kurowski, Tomasz Piontek, Aleksandra Swiercz:
Highly Efficient Parallel Approach to the Next-Generation DNA Sequencing. PPAM (2) 2011: 262-271
2000 – 2009
- 2009
- [j22]Jacek Blazewicz, Marcin Bryja, Marek Figlerowicz, Piotr Gawron, Marta Kasprzak, Edward Kirton, Darren Platt, Jakub Przybytek, Aleksandra Swiercz, Lukasz Szajkowski:
Whole genome assembly from 454 sequencing output via modified DNA graph concept. Comput. Biol. Chem. 33(3): 224-230 (2009) - [j21]Jacek Blazewicz, Edmund K. Burke, Marta Kasprzak, Alexandr Kovalev, Mikhail Y. Kovalyov:
On the approximability of the Simplified Partial Digest Problem. Discret. Appl. Math. 157(17): 3586-3592 (2009) - 2008
- [j20]Jacek Blazewicz, Marta Kasprzak, Benjamin Leroy-Beaulieu, Dominique de Werra:
Finding Hamiltonian circuits in quasi-adjoint graphs. Discret. Appl. Math. 156(13): 2573-2580 (2008) - [c4]Jacek Blazewicz, Marta Kasprzak, Aleksandra Swiercz, Marek Figlerowicz, Piotr Gawron, Darren Platt, Lukasz Szajkowski:
Parallel Implementation of the Novel Approach to Genome Assembly. SNPD 2008: 732-737 - 2007
- [j19]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Petra Schuurman, Gerhard J. Woeginger:
A polynomial time equivalence between DNA sequencing and the exact perfect matching problem. Discret. Optim. 4(2): 154-162 (2007) - [j18]Jacek Blazewicz, Edmund K. Burke, Marta Kasprzak, Alexandr Kovalev, Mikhail Y. Kovalyov:
Simplified Partial Digest Problem: Enumerative and Dynamic Programming Algorithms. IEEE ACM Trans. Comput. Biol. Bioinform. 4(4): 668-680 (2007) - 2006
- [j17]Jacek Blazewicz, Fred W. Glover, Marta Kasprzak, Wojciech T. Markiewicz, Ceyda Oguz, Dietrich Rebholz-Schuhmann, Aleksandra Swiercz:
Dealing with repetitions in sequencing by hybridization. Comput. Biol. Chem. 30(5): 313-320 (2006) - [j16]Jacek Blazewicz, Marta Kasprzak:
Computational complexity of isothermic DNA sequencing by hybridization. Discret. Appl. Math. 154(5): 718-729 (2006) - [c3]Jacek Blazewicz, Marta Kasprzak:
On the complexity of the DNA Simplified Partial Digest Problem. CATS 2006: 93-100 - 2005
- [j15]Jacek Blazewicz, Fred W. Glover, Marta Kasprzak:
Evolutionary Approaches to DNA Sequencing with Errors. Ann. Oper. Res. 138(1): 67-78 (2005) - [j14]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak:
Selected combinatorial problems of computational biology. Eur. J. Oper. Res. 161(3): 585-597 (2005) - [j13]Jacek Blazewicz, Marta Kasprzak:
Combinatorial optimization in DNA mapping - a computational thread of the Simplified Partial Digest Problem. RAIRO Oper. Res. 39(4): 227-241 (2005) - 2004
- [j12]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Aleksandra Swiercz:
Tabu search algorithm for DNA sequencing by hybridization with isothermic libraries. Comput. Biol. Chem. 28(1): 11-19 (2004) - [j11]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz:
Sequencing by hybridization with isothermic oligonucleotide libraries. Discret. Appl. Math. 145(1): 40-51 (2004) - [j10]Jacek Blazewicz, Fred W. Glover, Marta Kasprzak:
DNA Sequencing - Tabu and Scatter Search Combined. INFORMS J. Comput. 16(3): 232-240 (2004) - [j9]Ryszard W. Adamiak, Jacek Blazewicz, Piotr Formanowicz, Zofia Gdaniec, Marta Kasprzak, Mariusz Popenda, Marta Szachniuk:
An Algorithm for an Automatic NOE Pathways Analysis of 2D NMR Spectra of RNA Duplexes. J. Comput. Biol. 11(1): 163-179 (2004) - [c2]Jacek Blazewicz, Marek Figlerowicz, Przemyslaw Jackowiak, Dariusz Janny, Dariusz Jarczynski, Marta Kasprzak, Maciej Nalewaj, Bartosz Nowierski, Rafal Styszynski, Lukasz Szajkowski, Pawel Widera:
Parallel DNA Sequence Assembly. ENC 2004: 378-382 - 2003
- [j8]Jacek Blazewicz, Marta Kasprzak:
Complexity of DNA sequencing by hybridization. Theor. Comput. Sci. 290(3): 1459-1473 (2003) - 2002
- [j7]Jacek Blazewicz, Piotr Formanowicz, Frédéric Guinand, Marta Kasprzak:
A heuristic managing errors for DNA sequencing. Bioinform. 18(5): 652-660 (2002) - [j6]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Daniel Kobler:
On the recognition of de Bruijn graphs and their induced subgraphs. Discret. Math. 245(1-3): 81-92 (2002) - [j5]Jacek Blazewicz, Marta Kasprzak, Wojciech Kuroczycki:
Hybrid Genetic Algorithm for DNA Sequencing with Errors. J. Heuristics 8(5): 495-502 (2002) - [c1]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Petra Schuurman, Gerhard J. Woeginger:
DNA Sequencing, Eulerian Graphs, and the Exact Perfect Matching Problem. WG 2002: 13-24 - 2001
- [j4]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Marcin Jaroszewski, Wojciech T. Markiewicz:
Construction of DNA restriction maps based on a simplified experiment. Bioinform. 17(5): 398-404 (2001) - 2000
- [j3]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Jan Weglarz:
Tabu search for DNA sequencing with false negatives and false positives. Eur. J. Oper. Res. 125(2): 257-265 (2000)
1990 – 1999
- 1999
- [j2]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Jan Weglarz:
DNA Sequencing With Positive and Negative Errors. J. Comput. Biol. 6(1): 113-123 (1999) - 1997
- [j1]Jacek Blazewicz, Janusz Kaczmarek, Marta Kasprzak, Wojciech T. Markiewicz, Jan Weglarz:
Sequential and parallel algorithms for DNA sequencing. Comput. Appl. Biosci. 13(2): 151-158 (1997)
Coauthor Index
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