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Christophe Fraser
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2020 – today
- 2022
- [j12]Christopher E. Overton
, Lorenzo Pellis
, Helena B. Stage
, Francesca Scarabel
, Joshua Burton
, Christophe Fraser
, Ian M. Hall
, Thomas A. House
, Chris P. Jewell, Anel Nurtay
, Filippo Pagani, Katrina A. Lythgoe:
EpiBeds: Data informed modelling of the COVID-19 hospital burden in England. PLoS Comput. Biol. 18(9): 1010406 (2022) - 2021
- [j11]Matthew Abueg
, Robert Hinch
, Neo Wu, Luyang Liu, William J. M. Probert, Austin Wu, Paul Eastham, Yusef Shafi, Matt Rosencrantz, Michael Dikovsky, Zhao Cheng, Anel Nurtay
, Lucie Abeler-Dörner, David G. Bonsall, Michael V. McConnell
, Shawn O'Banion
, Christophe Fraser
:
Modeling the effect of exposure notification and non-pharmaceutical interventions on COVID-19 transmission in Washington state. npj Digit. Medicine 4 (2021) - [j10]Robert Hinch
, William J. M. Probert
, Anel Nurtay
, Michelle Kendall
, Chris Wymant, Matthew Hall
, Katrina A. Lythgoe, Ana Bulas Cruz
, Lele Zhao
, Andrea Stewart
, Luca Ferretti
, Daniel Montero, James Warren
, Nicole Mather, Matthew Abueg
, Neo Wu
, Olivier Legat
, Katie Bentley
, Thomas Mead
, Kelvin Van-Vuuren, Dylan Feldner-Busztin
, Tommaso Ristori
, Anthony Finkelstein
, David G. Bonsall
, Lucie Abeler-Dörner
, Christophe Fraser
:
OpenABM-Covid19 - An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracing. PLoS Comput. Biol. 17(7) (2021) - [j9]Michael Pickles
, Anne Cori, William J. M. Probert
, Rafael Sauter
, Robert Hinch
, Sarah Fidler
, Helen Ayles
, Peter Bock, Deborah Donnell
, Ethan Wilson, Estelle Piwowar-Manning, Sian Floyd, Richard J. Hayes
, Christophe Fraser
, HPTN 071 (PopART) Study Team:
PopART-IBM, a highly efficient stochastic individual-based simulation model of generalised HIV epidemics developed in the context of the HPTN 071 (PopART) trial. PLoS Comput. Biol. 17(9) (2021) - [i1]Vittoria Colizza, Eva Grill, Rafael T. Mikolajczyk, Ciro Cattuto, Adam J. Kucharski, Steven Riley, Michelle Kendall, Katrina A. Lythgoe, Lucie Abeler-Dörner, Chris Wymant, David G. Bonsall, Luca Ferretti, Christophe Fraser:
Epidemiological and public health requirements for COVID-19 contact tracing apps and their evaluation. CoRR abs/2102.05445 (2021)
2010 – 2019
- 2017
- [j8]Gytis Dudas
, Luiz Max Carvalho
, Trevor Bedford, Andrew J. Tatem
, Guy Baele
, Nuno R. Faria
, Daniel J. Park, Jason T. Ladner
, Armando Arias
, Danny Asogun, Filip Bielejec, Sarah L. Caddy
, Matthew Cotten
, Jonathan D'Ambrozio, Simon Dellicour
, Antonino Di Caro
, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert
, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans
, Julian A. Hiscox
, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu
, Christine M. Malboeuf, Suzanne Mate, David A. Matthews
, Christian B. Matranga, Luke W. Meredith
, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan
, Georgios Pollakis
, Chantal B. Reusken, Mariano Sanchez-Lockhart
, Stephen F. Schaffner
, John S. Schieffelin
, Rachel S. G. Sealfon, Etienne Simon-Loriere
, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin
, Mohamed A. Vandi, Simon J. Watson
, Kendra West, Shannon Whitmer, Michael R. Wiley
, Sarah M. Winnicki, Shirlee Wohl
, Roman Wölfel
, Nathan L. Yozwiak, Kristian G. Andersen
, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser
, George F. Gao, Robert F. Garry
, Ian Goodfellow
, Stephan Günther
, Christian T. Happi
, Edward C. Holmes
, Brima Kargbo, Sakoba Keïta, Paul Kellam
, Marion Koopmans
, Jens H. Kuhn
, Nicholas J. Loman
, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios
, Oliver G. Pybus
, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut:
Virus genomes reveal factors that spread and sustained the Ebola epidemic. Nat. 544(7650): 309-315 (2017) - [j7]Hilje M. Doekes
, Christophe Fraser
, Katrina A. Lythgoe
:
Effect of the Latent Reservoir on the Evolution of HIV at the Within- and Between-Host Levels. PLoS Comput. Biol. 13(1) (2017) - 2014
- [j6]Thibaut Jombart, Anne Cori
, Xavier Didelot
, Simon Cauchemez, Christophe Fraser
, Neil M. Ferguson
:
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. PLoS Comput. Biol. 10(1) (2014) - 2013
- [j5]Gkikas Magiorkinis, Vana Sypsa
, Emmanouil Magiorkinis
, Dimitrios Paraskevis
, Antigoni Katsoulidou, Robert Belshaw, Christophe Fraser
, Oliver George Pybus
, Angelos Hatzakis:
Integrating Phylodynamics and Epidemiology to Estimate Transmission Diversity in Viral Epidemics. PLoS Comput. Biol. 9(1) (2013) - [j4]Katy Robinson, Nick Fyson, Ted Cohen
, Christophe Fraser
, Caroline Colijn:
How the Dynamics and Structure of Sexual Contact Networks Shape Pathogen Phylogenies. PLoS Comput. Biol. 9(6) (2013) - 2012
- [j3]Oliver Ratmann
, Gé Donker
, Adam Meijer, Christophe Fraser
, Katia Koelle:
Phylodynamic Inference and Model Assessment with Approximate Bayesian Computation: Influenza as a Case Study. PLoS Comput. Biol. 8(12) (2012) - 2011
- [j2]George Shirreff, Lorenzo Pellis
, Oliver Laeyendecker
, Christophe Fraser
:
Transmission Selects for HIV-1 Strains of Intermediate Virulence: A Modelling Approach. PLoS Comput. Biol. 7(10) (2011)
2000 – 2009
- 2009
- [j1]Jing Tang
, William P. Hanage, Christophe Fraser
, Jukka Corander:
Identifying Currents in the Gene Pool for Bacterial Populations Using an Integrative Approach. PLoS Comput. Biol. 5(8) (2009)
Coauthor Index
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