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Yongchun Zuo
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2020 – today
- 2024
- [j27]Zhihao Si, Hanshuang Li, Wenjing Shang, Yanan Zhao, Lingjiao Kong, Chunshen Long, Yongchun Zuo, Zhenxing Feng:
SpaNCMG: improving spatial domains identification of spatial transcriptomics using neighborhood-complementary mixed-view graph convolutional network. Briefings Bioinform. 25(4) (2024) - [j26]Tao Wang, Xiaojun Su, Yuchao Liang, Xu Luo, Xiao Hu, Ting Xia, Xuebin Ma, Yongchun Zuo, Huilin Xia, Lei Yang:
Integrated deep learning model for automatic detection and classification of stenosis in coronary angiography. Comput. Biol. Chem. 112: 108184 (2024) - [j25]Pengfei Liang, Hanshuang Li, Chunshen Long, Mingzhu Liu, Jian Zhou, Yongchun Zuo:
Chromatin region binning of gene expression for improving embryo cell subtype identification. Comput. Biol. Medicine 170: 108049 (2024) - 2023
- [j24]Mingzhu Liu, Jian Zhou, Qilemuge Xi, Yuchao Liang, Haicheng Li, Pengfei Liang, Yuting Guo, Ming Liu, Temuqile Temuqile, Lei Yang, Yongchun Zuo:
A computational framework of routine test data for the cost-effective chronic disease prediction. Briefings Bioinform. 24(2) (2023) - [j23]Min Zou, Honghao Li, Dongqing Su, Yuqiang Xiong, Haodong Wei, Shiyuan Wang, Hongmei Sun, Tao Wang, Qilemuge Xi, Yongchun Zuo, Lei Yang:
Integrating somatic mutation profiles with structural deep clustering network for metabolic stratification in pancreatic cancer: a comprehensive analysis of prognostic and genomic landscapes. Briefings Bioinform. 25(1) (2023) - [j22]Haoxin Zhang, Meng Chi, Dongqing Su, Yuqiang Xiong, Haodong Wei, Yao Yu, Yongchun Zuo, Lei Yang:
A random forest-based metabolic risk model to assess the prognosis and metabolism-related drug targets in ovarian cancer. Comput. Biol. Medicine 153: 106432 (2023) - [j21]Dongqing Su, Yuqiang Xiong, Shiyuan Wang, Haodong Wei, Jiawei Ke, Honghao Li, Tao Wang, Yongchun Zuo, Lei Yang:
Structural deep clustering network for stratification of breast cancer patients through integration of somatic mutation profiles. Comput. Methods Programs Biomed. 242: 107808 (2023) - [j20]Lei Zheng, Pengfei Liang, Chunshen Long, Haicheng Li, Hanshuang Li, Yuchao Liang, Xiang He, Qilemuge Xi, Yongqiang Xing, Yongchun Zuo:
EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis. Nucleic Acids Res. 51(D1): 924-932 (2023) - 2022
- [j19]Yu Sun, Haicheng Li, Lei Zheng, Jinzhao Li, Yan Hong, Pengfei Liang, Lai-Yu Kwok, Yongchun Zuo, Wenyi Zhang, Heping Zhang:
iProbiotics: a machine learning platform for rapid identification of probiotic properties from whole-genome primary sequences. Briefings Bioinform. 23(1) (2022) - [j18]Lei Zheng, Dongyang Liu, Yuan Alex Li, Siqi Yang, Yuchao Liang, Yongqiang Xing, Yongchun Zuo:
RaacFold: a webserver for 3D visualization and analysis of protein structure by using reduced amino acid alphabets. Nucleic Acids Res. 50(W1): 633-638 (2022) - 2021
- [j17]Shiyuan Wang, Qi Zhang, Chunlu Yu, Yiyin Cao, Yongchun Zuo, Lei Yang:
Immune cell infiltration-based signature for prognosis and immunogenomic analysis in breast cancer. Briefings Bioinform. 22(2): 2020-2031 (2021) - [j16]Zerong Wang, Dongyang Liu, Baofang Xu, Ruixia Tian, Yongchun Zuo:
Modular arrangements of sequence motifs determine the functional diversity of KDM proteins. Briefings Bioinform. 22(3) (2021) - [j15]Lei Zheng, Dongyang Liu, Wuritu Yang, Lei Yang, Yongchun Zuo:
RaacLogo: a new sequence logo generator by using reduced amino acid clusters. Briefings Bioinform. 22(3) (2021) - [j14]Shiyuan Wang, Yuqiang Xiong, Qi Zhang, Dongqing Su, Chunlu Yu, Yiyin Cao, Yi Pan, Qianzi Lu, Yongchun Zuo, Lei Yang:
Clinical significance and immunogenomic landscape analyses of the immune cell signature based prognostic model for patients with breast cancer. Briefings Bioinform. 22(4) (2021) - [j13]Pengfei Liang, Lei Zheng, Chunshen Long, Wuritu Yang, Lei Yang, Yongchun Zuo:
HelPredictor models single-cell transcriptome to predict human embryo lineage allocation. Briefings Bioinform. 22(6) (2021) - [j12]Hao Wang, Pengfei Liang, Lei Zheng, Chunshen Long, Hanshuang Li, Yongchun Zuo:
eHSCPr discriminating the cell identity involved in endothelial to hematopoietic transition. Bioinform. 37(15): 2157-2164 (2021) - [j11]Qilemuge Xi, Hao Wang, Liuxi Yi, Jian Zhou, Yuchao Liang, Xiaoqing Zhao, Yongchun Zuo:
ANPrAod: Identify Antioxidant Proteins by Fusing Amino Acid Clustering Strategy and N -Peptide Combination. Comput. Math. Methods Medicine 2021: 5518209:1-5518209:10 (2021) - 2020
- [j10]Na Ta, Hanshuang Li, Shuai Liu, Yongchun Zuo:
Mining Key Regulators of Cell Reprogramming and Prediction Research Based on Deep Learning Neural Networks. IEEE Access 8: 23179-23185 (2020) - [j9]Zijie Sun, Shenghui Huang, Lei Zheng, Pengfei Liang, Wuritu Yang, Yongchun Zuo:
ICTC-RAAC: An improved web predictor for identifying the types of ion channel-targeted conotoxins by using reduced amino acid cluster descriptors. Comput. Biol. Chem. 89: 107371 (2020)
2010 – 2019
- 2019
- [j8]Chunshen Long, Wei Li, Pengfei Liang, Shuai Liu, Yongchun Zuo:
Transcriptome Comparisons of Multi-Species Identify Differential Genome Activation of Mammals Embryogenesis. IEEE Access 7: 7794-7802 (2019) - [j7]Dongyang Liu, Guangpeng Li, Yongchun Zuo:
Function determinants of TET proteins: the arrangements of sequence motifs with specific codes. Briefings Bioinform. 20(5): 1826-1835 (2019) - [j6]Lei Zheng, Shenghui Huang, Nengjiang Mu, Haoyue Zhang, Jiayu Zhang, Yu Chang, Lei Yang, Yongchun Zuo:
RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using Chou's five-step rule. Database J. Biol. Databases Curation 2019: baz131 (2019) - 2018
- [j5]Mengye Lu, Shuai Liu, Arun Kumar Sangaiah, Yunpeng Zhou, Zheng Pan, Yongchun Zuo:
Nucleosome Positioning With Fractal Entropy Increment of Diversity in Telemedicine. IEEE Access 6: 33451-33459 (2018) - [j4]Lu-Qiang Zhang, Qian-Zhong Li, Wen Jin, Yongchun Zuo, Shu-Chun Guo:
Genome-wide analysis of H3K36me3 and its regulations to cancer-related genes expression in human cell lines. Biosyst. 171: 59-65 (2018) - 2017
- [j3]Dongxue Che, Yang Wang, Weiyang Bai, Leijie Li, Guiyou Liu, Liangcai Zhang, Yongchun Zuo, Shiheng Tao, Jinlian Hua, Mingzhi Liao:
Dynamic and modular gene regulatory networks drive the development of gametogenesis. Briefings Bioinform. 18(4): 712-721 (2017) - [j2]Yongchun Zuo, Yuan Li, Yingli Chen, Guangpeng Li, Zhenhe Yan, Lei Yang:
PseKRAAC: a flexible web server for generating pseudo K-tuple reduced amino acids composition. Bioinform. 33(1): 122-124 (2017) - 2013
- [j1]Tao Li, Qian-Zhong Li, Shuai Liu, Guoliang Fan, Yongchun Zuo, Yong Peng:
PreDNA: accurate prediction of DNA-binding sites in proteins by integrating sequence and geometric structure information. Bioinform. 29(6): 678-685 (2013)
2000 – 2009
- 2009
- [c2]Lei Yang, Qianzhong Li, Yongchun Zuo:
Prediction of Presynaptic and Postsynaptic Neurotoxins Using Hybrid Approach and Pseudo Amino Acid Composition. BMEI 2009: 1-4 - [c1]Yongchun Zuo, Qianzhong Li:
Predicting Plant Pol-II Promoter Based on Subsequence Increment of Overlap Content Diversity. BMEI 2009: 1-5
Coauthor Index
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