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Kai Blin
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2020 – today
- 2022
- [j20]Mehmet Direnç Mungan
, Kai Blin
, Nadine Ziemert
:
ARTS-DB: a database for antibiotic resistant targets. Nucleic Acids Res. 50(D1): 736-740 (2022) - 2021
- [j19]Satria A. Kautsar
, Kai Blin
, Simon Shaw, Tilmann Weber
, Marnix H. Medema
:
BiG-FAM: the biosynthetic gene cluster families database. Nucleic Acids Res. 49(Database-Issue): D490-D497 (2021) - [j18]Kai Blin
, Simon Shaw, Satria A. Kautsar
, Marnix H. Medema
, Tilmann Weber
:
The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymes. Nucleic Acids Res. 49(Database-Issue): D639-D643 (2021) - [j17]Kai Blin
, Simon Shaw, Alexander M. Kloosterman, Zachary Charlop-Powers
, Gilles P. van Wezel
, Marnix H. Medema
, Tilmann Weber
:
antiSMASH 6.0: improving cluster detection and comparison capabilities. Nucleic Acids Res. 49(Webserver-Issue): 29-35 (2021) - 2020
- [j16]Satria A. Kautsar
, Kai Blin
, Simon Shaw, Jorge C. Navarro-Muñoz
, Barbara R. Terlouw
, Justin J. J. van der Hooft
, Jeffrey A. van Santen
, Vittorio Tracanna
, Hernando G. Suarez Duran
, Victòria Pascal Andreu
, Nelly Selem Mojica
, Mohammad Alanjary
, Serina L. Robinson
, George Lund
, Samuel C. Epstein
, Ashley C. Sisto
, Louise K. Charkoudian
, Jérôme Collemare
, Roger G. Linington
, Tilmann Weber
, Marnix H. Medema
:
MIBiG 2.0: a repository for biosynthetic gene clusters of known function. Nucleic Acids Res. 48(Database-Issue): D454-D458 (2020) - [j15]Mehmet Direnç Mungan, Mohammad Alanjary
, Kai Blin
, Tilmann Weber
, Marnix H. Medema
, Nadine Ziemert
:
ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining. Nucleic Acids Res. 48(Webserver-Issue): W546-W552 (2020)
2010 – 2019
- 2019
- [j14]Kai Blin
, Hyun Uk Kim
, Marnix H. Medema
, Tilmann Weber
:
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters. Briefings Bioinform. 20(4): 1103-1113 (2019) - [j13]Kai Blin
, Victòria Pascal Andreu, Emmanuel L. C. de los Santos
, Francesco Del Carratore
, Sang Yup Lee
, Marnix H. Medema
, Tilmann Weber
:
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters. Nucleic Acids Res. 47(Database-Issue): D625-D630 (2019) - [j12]Kai Blin
, Simon Shaw, Katharina Steinke
, Rasmus Villebro, Nadine Ziemert
, Sang Yup Lee
, Marnix H. Medema
, Tilmann Weber
:
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline. Nucleic Acids Res. 47(Webserver-Issue): W81-W87 (2019) - 2018
- [j11]Kai Blin
, Wolfgang Wohlleben, Tilmann Weber
:
Patscanui: an intuitive web interface for searching patterns in DNA and protein data. Nucleic Acids Res. 46(Webserver-Issue): W205-W208 (2018) - 2017
- [j10]Kai Blin
, Marnix H. Medema
, Renzo Kottmann, Sang Yup Lee
, Tilmann Weber
:
The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters. Nucleic Acids Res. 45(Database-Issue): D555-D559 (2017) - [j9]Kai Blin
, Thomas Wolf, Marc G. Chevrette
, Xiaowen Lu, Christopher J. Schwalen, Satria A. Kautsar
, Hernando G. Suarez Duran
, Emmanuel L. C. de los Santos
, Hyun Uk Kim
, Mariana Nave, Jeroen S. Dickschat, Douglas A. Mitchell, Ekaterina Shelest
, Rainer Breitling
, Eriko Takano, Sang Yup Lee, Tilmann Weber
, Marnix H. Medema
:
antiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification. Nucleic Acids Res. 45(Webserver-Issue): W36-W41 (2017) - [j8]Mohammad Alanjary
, Brent Kronmiller, Martina Adamek
, Kai Blin
, Tilmann Weber
, Daniel H. Huson, Benjamin Philmus
, Nadine Ziemert
:
The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery. Nucleic Acids Res. 45(Webserver-Issue): W42-W48 (2017) - [j7]Satria A. Kautsar
, Hernando G. Suarez Duran
, Kai Blin
, Anne Osbourn, Marnix H. Medema
:
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters. Nucleic Acids Res. 45(Webserver-Issue): W55-W63 (2017) - 2016
- [j6]Yasset Pérez-Riverol
, Laurent Gatto
, Rui Wang, Timo Sachsenberg, Julian Uszkoreit
, Felipe da Veiga Leprevost
, Christian Fufezan, Tobias Ternent
, Stephen J. Eglen
, Daniel S. Katz
, Tom J. Pollard
, Alexander Konovalov
, Robert M. Flight
, Kai Blin
, Juan Antonio Vizcaíno
:
Ten Simple Rules for Taking Advantage of Git and GitHub. PLoS Comput. Biol. 12(7) (2016) - 2015
- [j5]Kai Blin
, Christoph Dieterich, Ricardo Wurmus, Nikolaus Rajewsky
, Markus Landthaler
, Altuna Akalin
:
DoRiNA 2.0 - upgrading the doRiNA database of RNA interactions in post-transcriptional regulation. Nucleic Acids Res. 43(Database-Issue): 160-167 (2015) - [j4]Tilmann Weber
, Kai Blin
, Srikanth Duddela, Daniel Krug
, Hyun Uk Kim
, Robert E. Bruccoleri, Sang Yup Lee
, Michael A. Fischbach
, Rolf Müller
, Wolfgang Wohlleben, Rainer Breitling
, Eriko Takano
, Marnix H. Medema
:
antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters. Nucleic Acids Res. 43(Webserver-Issue): W237-W243 (2015) - 2013
- [j3]Kai Blin
, Marnix H. Medema
, Daniyal Kazempour, Michael A. Fischbach
, Rainer Breitling
, Eriko Takano
, Tilmann Weber:
antiSMASH 2.0 - a versatile platform for genome mining of secondary metabolite producers. Nucleic Acids Res. 41(Webserver-Issue): 204-212 (2013) - 2011
- [j2]Marnix H. Medema
, Kai Blin
, Peter Cimermancic, Victor de Jager, Piotr Zakrzewski, Michael A. Fischbach
, Tilmann Weber, Eriko Takano
, Rainer Breitling
:
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. Nucleic Acids Res. 39(Web-Server-Issue): 339-346 (2011) - [j1]Marc Röttig, Marnix H. Medema
, Kai Blin
, Tilmann Weber, Christian Rausch, Oliver Kohlbacher
:
NRPSpredictor2 - a web server for predicting NRPS adenylation domain specificity. Nucleic Acids Res. 39(Web-Server-Issue): 362-367 (2011)
Coauthor Index

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last updated on 2023-03-22 22:24 CET by the dblp team
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