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Aly Azeem Khan
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- affiliation: University of Chicago, IL, USA
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2020 – today
- 2024
- [j5]Junjie Xia, Hoang Van Phan, Luke Vistain
, Mengjie Chen, Aly A. Khan, Savas Tay
:
Computational prediction of protein interactions in single cells by proximity sequencing. PLoS Comput. Biol. 20(3): 1011915 (2024) - [c7]Renyu Zhang, Aly A. Khan, Yuxin Chen, Robert L. Grossman:
Enhancing Instance-Level Image Classification with Set-Level Labels. ICLR 2024 - [c6]Leah L. Weber
, Derek Reiman
, Mrinmoy Saha Roddur
, Yuanyuan Qi
, Mohammed El-Kebir
, Aly A. Khan
:
TRIBAL: Tree Inference of B Cell Clonal Lineages. RECOMB 2024: 364-367 - 2023
- [c5]Renyu Zhang, Aly A. Khan, Robert L. Grossman, Yuxin Chen:
Scalable Batch-Mode Deep Bayesian Active Learning via Equivalence Class Annealing. ICLR 2023 - [i2]Renyu Zhang, Aly A. Khan, Yuxin Chen, Robert L. Grossman:
Enhancing Instance-Level Image Classification with Set-Level Labels. CoRR abs/2311.05659 (2023) - 2022
- [j4]Talal Ahmed
, Mark A. Carty, Stephane Wenric, Jonathan R. Dry
, Ameen A. Salahudeen, Aly A. Khan, Eric Lefkofsky, Martin C. Stumpe, Raphael Pelossof:
Privacy preserving validation for multiomic prediction models. Briefings Bioinform. 23(3) (2022) - 2021
- [j3]Derek Reiman
, Godhev Kumar Manakkat Vijay
, Heping Xu
, Andrew Sonin
, Dianyu Chen
, Nathan Salomonis
, Harinder Singh
, Aly A. Khan
:
Pseudocell Tracer - A method for inferring dynamic trajectories using scRNAseq and its application to B cells undergoing immunoglobulin class switch recombination. PLoS Comput. Biol. 17(5) (2021) - [i1]Renyu Zhang, Aly A. Khan, Robert L. Grossman, Yuxin Chen:
BALanCe: Deep Bayesian Active Learning via Equivalence Class Annealing. CoRR abs/2112.13737 (2021) - 2020
- [c4]Renyu Zhang, Aly A. Khan, Robert L. Grossman:
Evaluation of Hyperbolic Attention in Histopathology Images. BIBE 2020: 773-776 - [c3]Renyu Zhang, Christopher Weber, Robert L. Grossman, Aly A. Khan:
Evaluating and interpreting caption prediction for histopathology images. MLHC 2020: 418-435
2010 – 2019
- 2019
- [c2]Derek Reiman, Lingdao Sha, Irvin Ho, Timothy Tan, Denise Lau, Aly A. Khan:
Integrating RNA expression and visual features for immune infiltrate prediction. PSB 2019: 284-295 - 2018
- [j2]Somaye Hashemifar, Behnam Neyshabur, Aly A. Khan, Jinbo Xu:
Predicting protein-protein interactions through sequence-based deep learning. Bioinform. 34(17): i802-i810 (2018) - 2017
- [j1]Stefan Canzar
, Karlynn E. Neu
, Qingming Tang, Patrick C. Wilson, Aly A. Khan:
BASIC: BCR assembly from single cells. Bioinform. 33(3): 425-427 (2017)
2000 – 2009
- 2004
- [c1]Shobha Potluri, Aly Azeem Khan, A. Kuzminykh, Janusz M. Bujnicki, Alan M. Friedman, Chris Bailey-Kellogg:
Geometric Analysis of Cross-Linkability for Protein Fold Discrimination. Pacific Symposium on Biocomputing 2004: 447-458
Coauthor Index

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last updated on 2024-12-02 21:33 CET by the dblp team
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