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ORCIDFrédérique Lisacek
Person information
- affiliation: University of Geneva, Switzerland
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2020 – today
- 2024
[j23]Karina Martinez
, Jon Agirre, Yukie Akune, Kiyoko F. Aoki-Kinoshita, Cecilia N. Arighi, Kristian B. Axelsen, Evan Bolton, Emily Bordeleau, Nathan J. Edwards, Elisa Fadda, Ten Feizi, Catherine A. Hayes, Callum M. Ives, Hiren J. Joshi, Khakurel Krishna Prasad, Sofia Kossida, Frédérique Lisacek, Yan Liu, Thomas Lütteke, Junfeng Ma, Adnan Malik, Maria Jesus Martin, Akul Y. Mehta, Sriram Neelamegham, Kalpana Panneerselvam, René Ranzinger, Sylvie Ricard-Blum, Gaoussou Sanou, Vijay Shanker, Paul D. Thomas, Michael Tiemeyer, James Urban, Randi Vita, Jeet Vora, Yasunori Yamamoto, Raja Mazumder:
Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy. Database J. Biol. Databases Curation 2024 (2024)- 2023
- [c7]Catherine A. Hayes, Vincenzo Daponte, Frédérique Lisacek:
Linking glycan and protein data. SWAT4HCLS 2023: 179-180 - 2022
- [c6]Vincenzo Daponte, Catherine A. Hayes, Julien Mariethoz, Frédérique Lisacek:
Glycan Semantic Model Applications in Substructure Search. SWAT4HCLS 2022: 74-81 - 2021
- [j22]François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek:
LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification. Nucleic Acids Res. 49(Database-Issue): D1548-D1554 (2021) - [j21]Severine Duvaud, Chiara Gabella, Frédérique Lisacek, Heinz Stockinger, Vassilios Ioannidis, Christine Durinx:
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users. Nucleic Acids Res. 49(Webserver-Issue): 216-227 (2021) - 2020
- [j20]Areski Flissi, Emma Ricart, Clémentine Campart, Mickael Chevalier, Yoann Dufresne, Juraj Michalik, Philippe Jacques, Christophe Flahaut, Frédérique Lisacek, Valérie Leclère, Maude Pupin:
Norine: update of the nonribosomal peptide resource. Nucleic Acids Res. 48(Database-Issue): D465-D469 (2020)
2010 – 2019
- 2019
- [j19]Emma Ricart, Valérie Leclère, Areski Flissi, Markus Müller, Maude Pupin, Frédérique Lisacek:
rBAN: retro-biosynthetic analysis of nonribosomal peptides. J. Cheminformatics 11(1): 13:1-13:14 (2019) - [j18]François Bonnardel, Julien Mariethoz, Sebastian Salentin, Xavier Robin, Michael Schroeder, Serge Pérez, Frédérique Lisacek, Anne Imberty:
UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands. Nucleic Acids Res. 47(Database-Issue): D1236-D1244 (2019) - [r1]Frédérique Lisacek:
Proteome Informatics. Encyclopedia of Bioinformatics and Computational Biology (2) 2019: 60-75 - 2016
- [j17]Julien Mariethoz, Khaled Khatib, Davide Alocci, Matthew P. Campbell, Niclas G. Karlsson, Nicolle H. Packer, Elaine H. Mullen, Frédérique Lisacek:
SugarBindDB, a resource of glycan-mediated host-pathogen interactions. Nucleic Acids Res. 44(Database-Issue): 1243-1250 (2016) - 2015
- [c5]Davide Alocci, Julien Mariethoz, Frédérique Lisacek:
Glycan Pattern Search. SWAT4LS 2015: 38 - 2014
- [j16]Lou Götz, Jodie L. Abrahams, Julien Mariethoz, Pauline M. Rudd, Niclas G. Karlsson, Nicolle H. Packer, Matthew P. Campbell, Frédérique Lisacek:
GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination. Bioinform. 30(21): 3131-3133 (2014) - [j15]Paolo Romano, Frédérique Lisacek, Marco Masseroli:
NETTAB 2012 on "Integrated Bio-Search". BMC Bioinform. 15(S-1): S1 (2014) - [j14]Marco Masseroli, Barend Mons, Erik Bongcam-Rudloff, Stefano Ceri, Alexander E. Kel, François Rechenmann, Frédérique Lisacek, Paolo Romano:
Integrated Bio-Search: challenges and trends for the integration, search and comprehensive processing of biological information. BMC Bioinform. 15(S-1): S2 (2014) - [j13]Matthew P. Campbell, René Ranzinger, Thomas Lütteke, Julien Mariethoz, Catherine A. Hayes, Jingyu Zhang, Yukie Akune, Kiyoko F. Aoki-Kinoshita, David Damerell, Giorgio Carta, William S. York, Stuart M. Haslam, Hisashi Narimatsu, Pauline M. Rudd, Niclas G. Karlsson, Nicolle H. Packer, Frédérique Lisacek:
Toolboxes for a standardised and systematic study of glycans. BMC Bioinform. 15(S-1): S9 (2014) - [j12]Matthew P. Campbell, Robyn Peterson, Julien Mariethoz, Elisabeth Gasteiger, Yukie Akune, Kiyoko F. Aoki-Kinoshita, Frédérique Lisacek, Nicolle H. Packer:
UniCarbKB: building a knowledge platform for glycoproteomics. Nucleic Acids Res. 42(Database-Issue): 215-221 (2014) - [j11]Heinz Stockinger, Adrian M. Altenhoff, Konstantin Arnold, Amos Bairoch, Frederic B. Bastian, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane, Philippe Le Mercier, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi, Jacques Rougemont, Torsten Schwede, Christian von Mering, Erik van Nimwegen, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel:
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res. 42(Webserver-Issue): 436-441 (2014) - 2012
- [j10]Dominique Koua, Age Brauer, Silja Laht, Lauris Kaplinski, Philippe Favreau, Maido Remm, Frédérique Lisacek, Reto Stöcklin:
ConoDictor: a tool for prediction of conopeptide superfamilies. Nucleic Acids Res. 40(Web-Server-Issue): 238-241 (2012) - [c4]Frédérique Lisacek, Patrick Koks, Pascale Berthault, Grégoire Rossier, Guy Bottu, Jacques van Helden, Jean Sylvestre, Jean-Pierre Kraehenbuhl, Jack A. M. Leunissen:
eBiomics - A Website Promoting Good Practices and Specific Methods for using Bioinformatics Resources. BIOINFORMATICS 2012: 386-391 - 2011
- [j9]Catherine A. Hayes, Niclas G. Karlsson, Weston B. Struwe, Frédérique Lisacek, Pauline M. Rudd, Nicolle H. Packer, Matthew P. Campbell:
UniCarb-DB: a database resource for glycomic discovery. Bioinform. 27(9): 1343-1344 (2011) - [j8]Xavier Robin, Natacha Turck, Alexandre Hainard, Natalia Tiberti, Frédérique Lisacek, Jean-Charles Sanchez, Markus Müller:
pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinform. 12: 77 (2011)
2000 – 2009
- 2008
- [j7]Andreas Quandt, Patricia Hernandez, Alexandre Masselot, Céline Hernandez, Sergio Maffioletti, Cesare Pautasso, Ron D. Appel, Frédérique Lisacek:
swissPIT: a novel approach for pipelined analysis of mass spectrometry data. Bioinform. 24(11): 1416-1417 (2008) - 2007
- [c3]Christine Froidevaux, Frédérique Lisacek, Bastien Rance:
Extracting Sequential Nuggets of Knowledge. DEXA 2007: 740-750 - 2006
- [j6]Imad Tbahriti, Christine Chichester, Frédérique Lisacek, Patrick Ruch:
Using argumentation to retrieve articles with similar citations: An inquiry into improving related articles search in the MEDLINE digital library. Int. J. Medical Informatics 75(6): 488-495 (2006) - 2005
- [c2]Patrick Ruch, Robert H. Baud, Christine Chichester, Antoine Geissbühler, Frédérique Lisacek, Johan Marty, Dietrich Rebholz-Schuhmann, Imad Tbahriti, Anne-Lise Veuthey:
Extracting Key Sentences with Latent Argumentative Structuring. MIE 2005: 835-840 - 2004
- [c1]Imad Tbahriti, Christine Chichester, Frédérique Lisacek, Patrick Ruch:
Using Argumentation to Retrieve Articles with Similar Citations from MEDLINE. NLPBA/BioNLP 2004 - 2003
- [j5]Christine Chichester, Frédéric Nikitin, Jean-Christophe Ravarini, Frédérique Lisacek:
Consistency checks for characterizing protein forms. Comput. Biol. Chem. 27(1): 29-35 (2003) - [j4]Frédéric Nikitin, Frédérique Lisacek:
Investigating protein domain combinations in complete proteomes. Comput. Biol. Chem. 27(4-5): 481-495 (2003) - 2002
- [j3]Pedro Gonnet, Frédérique Lisacek:
Probabilistic alignment of motifs with sequences. Bioinform. 18(8): 1091-1101 (2002) - 2000
- [j2]Frédérique Lisacek:
Algorithms on Strings, Trees and Sequences: Dan Gusfield. Comput. Chem. 24(1): 135-137 (2000)
1990 – 1999
- 1999
- [j1]Laurence Vignal, Frédérique Lisacek, Joël Quinqueton, Yves D'Aubenton-Carafa, Claude Thermes:
A Multi-agent System Simulating Human Splice Site Recognition. Comput. Chem. 23(3-4): 219-231 (1999)
Coauthor Index
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