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Purvesh Khatri
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2020 – today
- 2024
- [i1]Sowmya S. Sundaram, Benjamin Solomon, Avani Khatri, Anisha Laumas, Purvesh Khatri, Mark A. Musen:
Use of a Structured Knowledge Base Enhances Metadata Curation by Large Language Models. CoRR abs/2404.05893 (2024) - 2022
- [j17]Laurynas Kalesinskas
, Sanjana Gupta, Purvesh Khatri
:
Increasing reproducibility, robustness, and generalizability of biomarker selection from meta-analysis using Bayesian methodology. PLoS Comput. Biol. 18(6) (2022) - 2021
- [j16]Lawrence Bai
, Madeleine K. D. Scott, Ethan Steinberg, Laurynas Kalesinskas, Aida Habtezion, Nigam H. Shah
, Purvesh Khatri
:
Computational drug repositioning of atorvastatin for ulcerative colitis. J. Am. Medical Informatics Assoc. 28(11): 2325-2335 (2021) - [j15]Adriana Tomic
, Ivan Tomic, Levi Waldron
, Ludwig Geistlinger, Max Kuhn, Rachel L. Spreng
, Lindsay C. Dahora
, Kelly E. Seaton, Georgia D. Tomaras, Jennifer Hill
, Niharika A. Duggal
, Ross D. Pollock
, Norman R. Lazarus, Stephen D. R. Harridge
, Janet M. Lord
, Purvesh Khatri
, Andrew J. Pollard
, Mark M. Davis
:
SIMON: Open-Source Knowledge Discovery Platform. Patterns 2(1): 100178 (2021) - [c12]Riya Gupta, Aditya M. Rao, Lara Murphy Jones, Purvesh Khatri
:
Formulating a gene signature for diagnosis of autoimmune and infectious diseases. BCB 2021: 68:1 - [c11]Madeleine Scott, Maneesha Limaye, Steven Schaffert, Robert West, Michael G. Ozawa, Pauline Chu, Viswam S. Nair, Albert C. Koong, Purvesh Khatri:
A multi-scale integrated analysis identifies KRT8 as a pan-cancer early biomarker. PSB 2021
2010 – 2019
- 2017
- [j14]William Yuan
, Dadi Jiang, Dhanya K. Nambiar
, Lydia P. Liew
, Michael P. Hay
, Joshua Bloomstein
, Peter Lu, Brandon Turner
, Quynh-Thu Le, Robert Tibshirani, Purvesh Khatri
, Mark G. Moloney, Albert C. Koong
:
Chemical Space Mimicry for Drug Discovery. J. Chem. Inf. Model. 57(4): 875-882 (2017) - [c10]Winston A. Haynes, Aurelie Tomczak, Purvesh Khatri:
Gene annotation bias impedes biomedical research. AMIA 2017 - [c9]Winston A. Haynes, Francesco Vallania, Purvesh Khatri:
Complementing single-cell RNA-seq using bulk transcriptional profiles. BIBM 2017: 1446-1450 - [c8]Winston A. Haynes, Francesco Vallania, Charles Liu, Erika Bongen, Aurelie Tomczak, Marta Andres-Terrè, Shane Lofgren, Andrew Tam, Cole A. Deisseroth, Matthew D. Li, Timothy E. Sweeney, Purvesh Khatri:
Empowering Multi-Cohort Gene Expression Analysis to Increase Reproducibility. PSB 2017: 144-153 - [c7]Madeleine Scott, Francesco Vallania, Purvesh Khatri:
Meta-Analysis of Continuous Phenotypes Identifies a Gene Signature that Correlates with COPD Disease Status. PSB 2017: 266-275 - 2015
- [j13]Mark A. Musen
, Carol A. Bean, Kei-Hoi Cheung, Michel Dumontier
, Kim A. Durante, Olivier Gevaert
, Alejandra N. González-Beltrán, Purvesh Khatri
, Steven H. Kleinstein, Martin J. O'Connor, Yannick Pouliot, Philippe Rocca-Serra, Susanna-Assunta Sansone
, Jeffrey A. Wiser:
The center for expanded data annotation and retrieval. J. Am. Medical Informatics Assoc. 22(6): 1148-1152 (2015) - 2014
- [c6]Alexander A. Morgan, Matthew D. Li, Achal S. Achrol, Purvesh Khatri, Samuel H. Cheshier:
Multiplex Meta-Analysis of Medulloblastoma Expression Studies with External Controls. Pacific Symposium on Biocomputing 2014: 99-109 - 2012
- [j12]Purvesh Khatri
, Marina Sirota
, Atul J. Butte:
Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges. PLoS Comput. Biol. 8(2) (2012) - 2010
- [j11]Alexander A. Morgan, Purvesh Khatri, Richard Hayden Jones
, Minnie M. Sarwal, Atul J. Butte:
Comparison of multiplex meta analysis techniques for understanding the acute rejection of solid organ transplants. BMC Bioinform. 11(S-9): S6 (2010) - [j10]Bogdan Done, Purvesh Khatri
, Arina Done, Sorin Draghici
:
Predicting Novel Human Gene Ontology Annotations Using Semantic Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 7(1): 91-99 (2010)
2000 – 2009
- 2009
- [j9]Adi L. Tarca, Sorin Draghici
, Purvesh Khatri
, Sonia S. Hassan, Pooja Mittal, Jung-Sun Kim, Chong Jai Kim, Juan Pedro Kusanovic
, Roberto Romero:
A novel signaling pathway impact analysis. Bioinform. 25(1): 75-82 (2009) - 2008
- [c5]Calin Voichita, Purvesh Khatri, Sorin Draghici
:
Identifying uncertainty regions in Support Vector Machines using geometric margin and convex hulls. IJCNN 2008: 3319-3324 - 2007
- [j8]Purvesh Khatri
, Calin Voichita, Khalid Kattan, Nadeem Ansari, Avani Khatri, Constantin Georgescu, Adi L. Tarca, Sorin Draghici
:
Onto-Tools: new additions and improvements in 2006. Nucleic Acids Res. 35(Web-Server-Issue): 206-211 (2007) - [c4]Purvesh Khatri, Sorin Draghici, Adi L. Tarca, Sonia S. Hassan, Roberto Romero
:
A System Biology Approach for the Steady-State Analysis of Gene Signaling Networks. CIARP 2007: 32-41 - [c3]Bogdan Done, Purvesh Khatri, Arina Done, Sorin Draghici:
Semantic Analysis of Genome Annotations using Weighting Schemes. CIBCB 2007: 212-218 - 2006
- [j7]Sorin Draghici
, Sivakumar Sellamuthu, Purvesh Khatri:
Babel's tower revisited: a universal resource for cross-referencing across annotation databases. Bioinform. 22(23): 2934-2939 (2006) - [j6]Purvesh Khatri
, Valmik Desai, Adi L. Tarca, Sivakumar Sellamuthu, Derek E. Wildman
, Roberto Romero, Sorin Draghici
:
New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate. Nucleic Acids Res. 34(Web-Server-Issue): 626-631 (2006) - 2005
- [j5]Purvesh Khatri
, Bogdan Done, Archana Rao, Arina Done, Sorin Draghici
:
A semantic analysis of the annotations of the human genome. Bioinform. 21(16): 3416-3421 (2005) - [j4]Purvesh Khatri
, Sorin Draghici
:
Ontological analysis of gene expression data: current tools, limitations, and open problems. Bioinform. 21(18): 3587-3595 (2005) - [j3]Purvesh Khatri
, Sivakumar Sellamuthu, Pooja Malhotra, Kashyap Amin, Arina Done, Sorin Draghici
:
Recent additions and improvements to the Onto-Tools. Nucleic Acids Res. 33(Web-Server-Issue): 762-765 (2005) - [c2]Valmik Desai, Purvesh Khatri, Arina Done, Aviva Friedman, Michael A. Tainsky, Sorin Draghici:
A Novel Bioinformatics Technique for Predicting Condition-specific Transcription Factor Binding Sites. CIBCB 2005: 202-207 - [c1]Sorin Draghici, Purvesh Khatri, Yanhong Liu, Kitty J. Chase, Elizabeth A. Bode, David A. Kulesh, Leonard P. Wasieloski, David A. Norwood, Jaques Reifman:
Identification of Genomic Signatures for the Design of Assays for the Detection and Monitoring of Anthrax Threats. Pacific Symposium on Biocomputing 2005 - 2004
- [j2]Purvesh Khatri
, Pratik Bhavsar, Gagandeep Bawa, Sorin Draghici
:
Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments. Nucleic Acids Res. 32(Web-Server-Issue): 449-456 (2004) - 2003
- [j1]Sorin Draghici
, Purvesh Khatri
, Pratik Bhavsar, Abhik Shah, Stephen A. Krawetz, Michael A. Tainsky
:
Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate. Nucleic Acids Res. 31(13): 3775-3781 (2003)
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last updated on 2024-05-16 22:09 CEST by the dblp team
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