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Luca Pinello
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2020 – today
- 2023
- [j11]Manuel Tognon, Rosalba Giugno, Luca Pinello:
A survey on algorithms to characterize transcription factor binding sites. Briefings Bioinform. 24(3) (2023) - 2021
- [j10]Manuel Tognon, Vincenzo Bonnici, Erik Garrison, Rosalba Giugno, Luca Pinello:
GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs. PLoS Comput. Biol. 17(9) (2021) - 2020
- [j9]Samuele Cancellieri, Matthew C. Canver, Nicola Bombieri, Rosalba Giugno, Luca Pinello:
CRISPRitz: rapid, high-throughput and variant-aware in silico off-target site identification for CRISPR genome editing. Bioinform. 36(7): 2001-2008 (2020) - [j8]Luca Albergante, Evgeny M. Mirkes, Jonathan Bac, Huidong Chen, Alexis Martin, Louis Faure, Emmanuel Barillot, Luca Pinello, Alexander N. Gorban, Andrei Yu. Zinovyev:
Robust and Scalable Learning of Complex Intrinsic Dataset Geometry via ElPiGraph. Entropy 22(3): 296 (2020)
2010 – 2019
- 2019
- [j7]Matthew C. Canver, Daniel E. Bauer, Takahiro Maeda, Luca Pinello:
DrugThatGene: integrative analysis to streamline the identification of druggable genes, pathways and protein complexes from CRISPR screens. Bioinform. 35(11): 1981-1984 (2019) - [i3]David Laehnemann, Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson, Catalina A. Vallejos, Niko Beerenwinkel, Kieran R. Campbell, Ahmed Mahfouz, Luca Pinello, Pavel Skums, Alexandros Stamatakis, Camille Stephan-Otto Attolini, Samuel Aparicio, Jasmijn A. Baaijens, Marleen Balvert, Buys de Barbanson, Antonio Cappuccio, Giacomo Corleone, Bas E. Dutilh, Maria Florescu, Victor Guryev, Rens Holmer, Katharina Jahn, Thamar Jessurun Lobo, Emma M. Keizer, Indu Khatri, Szymon M. Kielbasa, Jan O. Korbel, Alexey M. Kozlov, Tzu-Hao Kuo, Boudewijn P. F. Lelieveldt, Ion I. Mandoiu, John C. Marioni, Tobias Marschall, Felix Mölder, Amir Niknejad, Lukasz Raczkowski, Marcel J. T. Reinders, Jeroen de Ridder, Antoine-Emmanuel Saliba, Antonios Somarakis, Oliver Stegle, Fabian J. Theis, Huan Yang, Alex Zelikovsky, Alice C. McHardy, Benjamin J. Raphael, Sohrab P. Shah, Alexander Schönhuth:
12 Grand Challenges in Single-Cell Data Science. PeerJ Prepr. 7: e27885 (2019) - 2018
- [j6]Luca Pinello, Rick Farouni, Guo-Cheng Yuan:
Haystack: systematic analysis of the variation of epigenetic states and cell-type specific regulatory elements. Bioinform. 34(11): 1930-1933 (2018) - [j5]Kendell Clement, Rick Farouni, Daniel E. Bauer, Luca Pinello:
AmpUMI: design and analysis of unique molecular identifiers for deep amplicon sequencing. Bioinform. 34(13): i202-i210 (2018) - [i2]Luca Albergante, Evgeny M. Mirkes, Huidong Chen, Alexis Martin, Louis Faure, Emmanuel Barillot, Luca Pinello, Alexander N. Gorban, Andrei Yu. Zinovyev:
Robust and scalable learning of data manifolds with complex topologies via ElPiGraph. CoRR abs/1804.07580 (2018) - 2014
- [j4]Luca Pinello, Giosuè Lo Bosco, Guo-Cheng Yuan:
Applications of alignment-free methods in epigenomics. Briefings Bioinform. 15(3): 419-430 (2014) - [c8]Giosuè Lo Bosco, Luca Pinello:
A New Feature Selection Methodology for K-mers Representation of DNA Sequences. CIBB 2014: 99-108 - 2013
- [j3]Raffaele Giancarlo, Giosuè Lo Bosco, Luca Pinello, Filippo Utro:
A methodology to assess the intrinsic discriminative ability of a distance function and its interplay with clustering algorithms for microarray data analysis. BMC Bioinform. 14(S-1): S6 (2013) - 2011
- [j2]Luca Pinello, Giosuè Lo Bosco, Bret M. Hanlon, Guo-Cheng Yuan:
A motif-independent metric for DNA sequence specificity. BMC Bioinform. 12: 408 (2011) - [c7]Francesco Benvegna, Antonino D'Alessandro, Giosuè Lo Bosco, Dario Luzio, Luca Pinello, Domenico Tegolo:
A New Dissimilarity Measure for Clustering Seismic Signals. ICIAP (2) 2011: 434-443 - [i1]Luca Pinello:
Multi Layer Analysis. CoRR abs/1107.5349 (2011) - 2010
- [c6]Raffaele Giancarlo, Giosuè Lo Bosco, Luca Pinello, Filippo Utro:
The Three Steps of Clustering in the Post-Genomic Era: A Synopsis. CIBB 2010: 13-30 - [c5]Raffaele Giancarlo, Giosuè Lo Bosco, Luca Pinello:
Distance Functions, Clustering Algorithms and Microarray Data Analysis. LION 2010: 125-138
2000 – 2009
- 2009
- [j1]Vito Di Gesù, Giosuè Lo Bosco, Luca Pinello:
A one class KNN for signal identification: a biological case study. Int. J. Knowl. Eng. Soft Data Paradigms 1(4): 376-389 (2009) - [c4]Giosuè Lo Bosco, Luca Pinello:
A Fuzzy One Class Classifier for Multi Layer Model. WILF 2009: 124-131 - 2008
- [c3]Vito Di Gesù, Giosuè Lo Bosco, Luca Pinello:
Interval Length Analysis in Multi Layer Model. CIBB 2008: 114-122 - [c2]Vito Di Gesù, Giosuè Lo Bosco, Luca Pinello:
A One Class Classifier for Signal Identification: A Biological Case Study. KES (3) 2008: 747-754 - 2007
- [c1]Davide F. V. Corona, Vito Di Gesù, Giosuè Lo Bosco, Luca Pinello, Guo-Cheng Yuan:
A New Multi-Layers Method to Analyze Gene Expression. KES (3) 2007: 862-869
Coauthor Index
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