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Journal Articles
- 2025
[j13]Shashank Yellapantula
, Nicholas T. Wimer, Marc T. Henry de Frahan, Sreejith Nadakkal Appukuttan, Michael James Martin, Bruce A. Perry, Hariswaran Sitaraman, Mohammad J. Rahimi, Marc Day:
Accelerating Innovative Energy Solutions Using Combustion Simulations. Comput. Sci. Eng. 27(1): 9-17 (2025)- [j12]Kevin Patrick Griffin, Hilary Egan, Marc T. Henry de Frahan, Juliane Mueller, Deepthi Vaidhynathan, Dylan Wald, Rohit Chintala, Olga A. Doronina, Hariswaran Sitaraman, Ethan Young, Ryan King, Jibonananda Sanyal, Marc Day, Ross E. Larsen:
Adaptive Computing for Scale-Up Problems. Comput. Sci. Eng. 27(1): 28-38 (2025) - [j11]Cody J. Balos, Marcus Day, Lucas Esclapez, Anne M. Felden, David J. Gardner, Malik Hassanaly, Daniel R. Reynolds, Jon S. Rood, Jean M. Sexton, Nicholas T. Wimer, Carol S. Woodward:
SUNDIALS time integrators for exascale applications with many independent systems of ordinary differential equations. Int. J. High Perform. Comput. Appl. 39(1): 123-146 (2025) - 2023
- [j10]Marc T. Henry de Frahan, Jon S. Rood, Marcus S. Day, Hariswaran Sitaraman, Shashank Yellapantula, Bruce A. Perry, Ray W. Grout, Ann S. Almgren, Weiqun Zhang, John B. Bell, Jacqueline H. Chen:
PeleC: An adaptive mesh refinement solver for compressible reacting flows. Int. J. High Perform. Comput. Appl. 37(2): 115-131 (2023) - [j9]Lucas Esclapez, Marc Day, John Bell, Anne Felden, Candace Gilet, Ray W. Grout, Marc T. Henry de Frahan, Emmanuel Motheau, Andrew Nonaka, Landon Owen, Bruce A. Perry, Jon S. Rood, Nicolas Wimer, Weiqun Zhang:
PeleLMeX: an AMR Low Mach Number Reactive Flow Simulation Code without level sub-cycling. J. Open Source Softw. 8(91): 5450 (2023) - 2022
- [j8]Mahesh Natarajan, Ray W. Grout, Weiqun Zhang, Marcus S. Day:
A moving embedded boundary approach for the compressible Navier-Stokes equations in a block-structured adaptive refinement framework. J. Comput. Phys. 465: 111315 (2022) - 2019
- [j7]Juliane Müller, Marcus Day:
Surrogate Optimization of Computationally Expensive Black-Box Problems with Hidden Constraints. INFORMS J. Comput. 31(4): 689-702 (2019) - [j6]Weiqun Zhang, Ann S. Almgren, Vincent E. Beckner, John B. Bell, Johannes P. Blaschke, Cy P. Chan, Marcus Day, Brian Friesen, Kevin Gott, Daniel T. Graves, Maximilian Katz, Andrew Myers, Tan Nguyen, Andrew Nonaka, Michele Rosso, Samuel Williams, Michael Zingale:
AMReX: a framework for block-structured adaptive mesh refinement. J. Open Source Softw. 4(37): 1370 (2019) - 2018
- [j5]Matthias Morzfeld, Marcus S. Day, Ray W. Grout, George Shu Heng Pau, Stefan Finsterle, John B. Bell:
Iterative Importance Sampling Algorithms for Parameter Estimation. SIAM J. Sci. Comput. 40(2) (2018) - 2016
- [j4]Weiqun Zhang, Ann S. Almgren, Marcus Day, Tan Nguyen, John Shalf, Didem Unat:
BoxLib with Tiling: An Adaptive Mesh Refinement Software Framework. SIAM J. Sci. Comput. 38(5) (2016) - 2011
- [j3]Peer-Timo Bremer, Gunther H. Weber, Julien Tierny, Valerio Pascucci, Marcus S. Day, John B. Bell:
Interactive Exploration and Analysis of Large-Scale Simulations Using Topology-Based Data Segmentation. IEEE Trans. Vis. Comput. Graph. 17(9): 1307-1324 (2011) - 2010
- [j2]Peer-Timo Bremer, Gunther H. Weber, Valerio Pascucci, Marcus S. Day, John B. Bell:
Analyzing and Tracking Burning Structures in Lean Premixed Hydrogen Flames. IEEE Trans. Vis. Comput. Graph. 16(2): 248-260 (2010) - 2006
- [j1]Zoran Dragojlovic, Farrokh Najmabadi, Marcus S. Day:
An embedded boundary method for viscous, conducting compressible flow. J. Comput. Phys. 216(1): 37-51 (2006)
Conference and Workshop Papers
- 2024
- [c4]Marc T. Henry de Frahan, Lucas Esclapez, Jon S. Rood, Nicholas T. Wimer, Paul Mullowney, Bruce A. Perry, Landon Owen, Hariswaran Sitaraman, Shashank Yellapantula, Malik Hassanaly, Mohammad J. Rahimi, Michael James Martin, Olga A. Doronina, Sreejith N. A., Martin Rieth, Wenjun Ge, Ramanan Sankaran, Ann S. Almgren, Weiqun Zhang, John B. Bell, Ray W. Grout, Marc Day, Jacqueline H. Chen:
The Pele Simulation Suite for Reacting Flows at Exascale. PP 2024: 13-25 - 2023
- [c3]Nicholas Malaya, Bronson Messer, Joseph Glenski, Antigoni Georgiadou, Justin Lietz, Kalyana C. Gottiparthi, Marc Day, Jackie Chen, Jon S. Rood, Lucas Esclapez, James B. White III, Gustav R. Jansen, Nicholas Curtis, Stephen Nichols, Jakub Kurzak, Noel Chalmers, Chip Freitag, Paul T. Bauman, Alessandro Fanfarillo, Reuben D. Budiardja, Thomas Papatheodore, Nicholas Frontiere, Damon McDougall, Matthew R. Norman, Sarat Sreepathi, Philip C. Roth, Dmytro Bykov, Noah Wolfe, Paul Mullowney, Markus Eisenbach, Marc T. Henry de Frahan, Wayne Joubert:
Experiences readying applications for Exascale. SC 2023: 53:1-53:13 - 2021
- [c2]Vincent Dumont, Casey Garner, Anuradha Trivedi, Chelsea Jones, Vidya Ganapati, Juliane Mueller, Talita Perciano, Mariam Kiran, Marc Day:
HYPPO: A Surrogate-Based Multi-Level Parallelism Tool for Hyperparameter Optimization. MLHPC@SC 2021: 81-93 - 2009
- [c1]Peer-Timo Bremer, Gunther H. Weber, Julien Tierny, Valerio Pascucci, Marcus S. Day, John B. Bell:
A Topological Framework for the Interactive Exploration of Large Scale Turbulent Combustion. eScience 2009: 247-254
Parts in Books or Collections
- 2011
- [p1]Gunther H. Weber, Peer-Timo Bremer, Marcus S. Day, John B. Bell, Valerio Pascucci:
Feature Tracking Using Reeb Graphs. Topological Methods in Data Analysis and Visualization 2011: 241-253
Informal and Other Publications
- 2025
- [i8]Morgan M. Fong, Hilary Egan, Marc Day, Kristin Potter, Michael James Martin:
Understanding Computational Science and Domain Science Skills Development in National Laboratory Graduate Internships. CoRR abs/2501.10601 (2025) - 2024
- [i7]Cody J. Balos, Marc Day, Lucas Esclapez, Anne Felden, David J. Gardner, Malik Hassanaly, Daniel R. Reynolds, Jon S. Rood, Jean M. Sexton, Nicholas T. Wimer, Carol S. Woodward:
SUNDIALS Time Integrators for Exascale Applications with Many Independent ODE Systems. CoRR abs/2405.01713 (2024) - [i6]Malik Hassanaly, Nicholas T. Wimer, Anne Felden, Lucas Esclapez, Julia Ream, Marc T. Henry de Frahan, Jon S. Rood, Marc Day:
Symbolic construction of the chemical Jacobian of quasi-steady state (QSS) chemistries for Exascale computing platforms. CoRR abs/2405.05974 (2024) - 2023
- [i5]Paul T. Bauman, Reuben D. Budiardja, Dmytro Bykov, Noel Chalmers, Jacqueline Chen, Nicholas Curtis, Marc Day, Markus Eisenbach, Lucas Esclapez, Alessandro Fanfarillo, William Freitag, Nicholas Frontiere, Antigoni Georgiadou, Joseph Glenski, Kalyana C. Gottiparthi, Marc T. Henry de Frahan, Gustav R. Jansen, Wayne Joubert, Justin G. Lietz, Jakub Kurzak, Nicholas Malaya, Bronson Messer, Damon McDougall, Paul Mullowney, Stephen Nichols, Matthew R. Norman, Thomas Papatheodore, Jon S. Rood, Philip C. Roth, Sarat Sreepathi, James B. White III, Noah Wolfe:
Experiences Readying Applications for Exascale. CoRR abs/2310.01586 (2023) - 2021
- [i4]Vincent Dumont, Casey Garner, Anuradha Trivedi, Chelsea Jones, Vidya Ganapati, Juliane Mueller, Talita Perciano, Mariam Kiran, Marc Day:
HYPPO: A Surrogate-Based Multi-Level Parallelism Tool for Hyperparameter Optimization. CoRR abs/2110.01698 (2021) - [i3]Stephen J. Thomas, Arielle Carr, Kasia Swirydowicz, Marc Day:
ILUT Smoothers for Hybrid C-AMG with Scaled Triangular Factors. CoRR abs/2111.09512 (2021) - 2020
- [i2]Jaideep Pathak, Mustafa Mustafa, Karthik Kashinath, Emmanuel Motheau, Thorsten Kurth, Marcus Day:
Using Machine Learning to Augment Coarse-Grid Computational Fluid Dynamics Simulations. CoRR abs/2010.00072 (2020) - 2016
- [i1]Weiqun Zhang, Ann S. Almgren, Marcus Day, Tan Nguyen, John Shalf, Didem Unat:
BoxLib with Tiling: An AMR Software Framework. CoRR abs/1604.03570 (2016)
Coauthor Index
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