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ORCIDRamy K. Aziz
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- affiliation: Cairo University, Faculty of Pharmacy, Egypt
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2020 – today
- 2020
[j11]James J. Davis, Alice R. Wattam, Ramy K. Aziz, Thomas S. Brettin, Ralph Butler, Rory Butler, Philippe Chlenski
, Neal Conrad, Allan Dickerman, Emily M. Dietrich, Joseph L. Gabbard, Svetlana Gerdes, Andrew Guard, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Daniel E. Murphy-Olson, Marcus Nguyen, Eric K. Nordberg, Gary J. Olsen, Robert Olson, Jamie C. Overbeek, Ross A. Overbeek, Bruce D. Parrello, Gordon D. Pusch, Maulik Shukla, Chris Thomas, Margo VanOeffelen, Veronika Vonstein, Andrew S. Warren, Fangfang Xia, Dawen Xie, Hyun Seung Yoo, Rick Stevens:
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities. Nucleic Acids Res. 48(Database-Issue): D606-D612 (2020)
2010 – 2019
- 2019
- [j10]Dionysios A. Antonopoulos, Rida Assaf, Ramy Karam Aziz, Thomas S. Brettin, Christopher Bun, Neal Conrad, James J. Davis, Emily M. Dietrich, Terry Disz, Svetlana Gerdes, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Daniel E. Murphy-Olson, Eric K. Nordberg, Gary J. Olsen, Robert Olson, Ross A. Overbeek, Bruce D. Parrello, Gordon D. Pusch, John Santerre, Maulik Shukla, Rick L. Stevens, Margo VanOeffelen, Veronika Vonstein, Andrew S. Warren, Alice R. Wattam, Fangfang Xia, Hyun Seung Yoo:
PATRIC as a unique resource for studying antimicrobial resistance. Briefings Bioinform. 20(4): 1094-1102 (2019) - 2011
- [j9]Ramy K. Aziz, Rama Saad, Mariam R. Rizkallah:
PharmacoMicrobiomics or how bugs modulate drugs: an educational initiative to explore the effects of human microbiome on drugs. BMC Bioinform. 12(S-7): A10 (2011) - [j8]Ramy K. Aziz, Bhakti Dwivedi, Mya Breitbart, Robert A. Edwards:
Phage Eco-Locator: a web tool for visualization and analysis of phage genomes in metagenomic data sets. BMC Bioinform. 12(S-7): A9 (2011) - 2010
- [j7]Ramy K. Aziz:
Subsystems-based servers for rapid annotation of genomes and metagenomes. BMC Bioinform. 11(S-4): O2 (2010) - [j6]Ramy K. Aziz, Bruce J. Aronow, William L. Taylor, Sarah Rowe, Rita Kansal, Mark J. Walker, Malak Kotb:
Integrating neighbor clustering, coexpression clustering and subsystems analysis to define dynamic changes in regulatory networks associated with group A streptococcal sociomicrobiology and niche adaptation. BMC Bioinform. 11(S-4): P12 (2010) - [j5]Ahmed Abo-Bakr Mahmoud, Ramy K. Aziz:
Do pathogenic bacteria encode more secreted proteins than their non-pathogenic relatives? BMC Bioinform. 11(S-4): P28 (2010) - [j4]Ramy Karam Aziz:
In silico analysis of a family of extracellular polysaccharide deacetylases involved in virulence of pathogenic gram-positive cocci. BMC Bioinform. 11(S-4): P8 (2010)
2000 – 2009
- 2009
- [j3]Heba M. Amin, Abdel-Gawad M. Hashem, Ramy K. Aziz:
Bioinformatics determination of ETEC signature genes as potential targets for molecular diagnosis and reverse vaccinology. BMC Bioinform. 10(S-7) (2009) - [j2]Ramy K. Aziz, Leslie Klis McNeil:
Reconstructing the virulome of the human pathogen Streptococcus pyogenes using NMPDR subsystems-based annotation. BMC Bioinform. 10(S-7) (2009) - 2007
- [j1]Leslie Klis McNeil, Claudia Reich, Ramy K. Aziz, Daniela Bartels, Matthew Cohoon, Terry Disz, Robert A. Edwards, Svetlana Gerdes, Kaitlyn Hwang, Michael Kubal, Gohar Rem Margaryan, Folker Meyer, William Mihalo, Gary J. Olsen, Robert Olson, Andrei Osterman, Daniel Paarmann, Tobias Paczian, Bruce D. Parrello, Gordon D. Pusch, Dmitry A. Rodionov, Xinghua Shi, Olga Vassieva, Veronika Vonstein, Olga Zagnitko, Fangfang Xia, Jenifer Zinner, Ross A. Overbeek, Rick Stevens:
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation. Nucleic Acids Res. 35(Database-Issue): 347-353 (2007)
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