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2020 – today
- 2021
[j21]Quan Liu
, Isabella M. Gaeta, Mengyang Zhao, Ruining Deng, Aadarsh Jha, Bryan A. Millis, Anita Mahadevan-Jansen, Matthew J. Tyska, Yuankai Huo:
ASIST: Annotation-free synthetic instance segmentation and tracking by adversarial simulations. Comput. Biol. Medicine 134: 104501 (2021)- [j20]Yucheng Tang, Riqiang Gao, Ho Hin Lee, Shizhong Han, Yunqiang Chen, Dashan Gao, Vishwesh Nath, Camilo Bermudez, Michael R. Savona, Richard G. Abramson, Shunxing Bao, Ilwoo Lyu, Yuankai Huo, Bennett A. Landman:
High-resolution 3D abdominal segmentation with random patch network fusion. Medical Image Anal. 69: 101894 (2021) - [j19]Mengyang Zhao, Aadarsh Jha, Quan Liu, Bryan A. Millis, Anita Mahadevan-Jansen, Le Lu, Bennett A. Landman, Matthew J. Tyska, Yuankai Huo:
Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and tracking. Medical Image Anal. 71: 102048 (2021) - [j18]Jorge A. Salas, Roza G. Bayrak, Yuankai Huo, Catie Chang:
Reconstruction of respiratory variation signals from fMRI data. NeuroImage 225: 117459 (2021) - [j17]Jinzheng Cai, Adam P. Harrison, Youjing Zheng, Ke Yan, Yuankai Huo, Jing Xiao, Lin Yang, Le Lu:
Lesion-Harvester: Iteratively Mining Unlabeled Lesions and Hard-Negative Examples at Scale. IEEE Trans. Medical Imaging 40(1): 59-70 (2021) - [j16]Yucheng Tang, Riqiang Gao, Shizhong Han, Yunqiang Chen, Dashan Gao, Vishwesh Nath, Camilo Bermudez, Michael R. Savona, Shunxing Bao, Ilwoo Lyu, Yuankai Huo, Bennett A. Landman:
Body Part Regression With Self-Supervision. IEEE Trans. Medical Imaging 40(5): 1499-1507 (2021) - [j15]Ruining Deng, Haichun Yang, Aadarsh Jha, Yuzhe Lu, Peng Chu, Agnes B. Fogo, Yuankai Huo:
Map3D: Registration-Based Multi-Object Tracking on 3D Serial Whole Slide Images. IEEE Trans. Medical Imaging 40(7): 1924-1933 (2021) - [c54]Xing Li, Haichun Yang, Jiaxin He, Aadarsh Jha, Agnes B. Fogo, Lee E. Wheless, Shilin Zhao, Yuankai Huo:
Beds: Bagging Ensemble Deep Segmentation For Nucleus Segmentation With Testing Stage Stain Augmentation. ISBI 2021: 659-662 - [c53]Ho Hin Lee, Yucheng Tang, Shunxing Bao, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Rap-Net: Coarse-To-Fine Multi-Organ Segmentation With Single Random Anatomical Prior. ISBI 2021: 1491-1494 - [c52]Yucheng Tang, Riqiang Gao, Ho Hin Lee, Qi Yang, Xin Yu, Yuyin Zhou, Shunxing Bao, Yuankai Huo, Jeffrey M. Spraggins, Jack Virostko, Zhoubing Xu, Bennett A. Landman:
Pancreas CT Segmentation by Predictive Phenotyping. MICCAI (1) 2021: 25-35 - [c51]Bolin Lai, Yuhsuan Wu, Xiaoyu Bai, Xiao-Yun Zhou, Peng Wang, Jinzheng Cai, Yuankai Huo, Lingyun Huang, Yong Xia, Jing Xiao, Le Lu, Heping Hu, Adam P. Harrison:
Liver Tumor Localization and Characterization from Multi-phase MR Volumes Using Key-Slice Prediction: A Physician-Inspired Approach. PRIME@MICCAI 2021: 47-58 - [c50]Ruining Deng, Quan Liu, Shunxing Bao, Aadarsh Jha, Catie Chang, Bryan A. Millis, Matthew J. Tyska, Yuankai Huo:
CaCL: Class-Aware Codebook Learning for Weakly Supervised Segmentation on Diffuse Image Patterns. DGM4MICCAI/DALI@MICCAI 2021: 93-102 - [c49]Quan Liu, Peter C. Louis, Yuzhe Lu, Aadarsh Jha, Mengyang Zhao, Ruining Deng, Tianyuan Yao, Joseph T. Roland, Haichun Yang, Shilin Zhao, Lee E. Wheless, Yuankai Huo:
SimTriplet: Simple Triplet Representation Learning with a Single GPU. MICCAI (2) 2021: 102-112 - [c48]Tianyuan Yao, Chang Qu, Quan Liu, Ruining Deng, Yuanhan Tian, Jiachen Xu, Aadarsh Jha, Shunxing Bao, Mengyang Zhao, Agnes B. Fogo, Bennett A. Landman, Catie Chang, Haichun Yang, Yuankai Huo:
Compound Figure Separation of Biomedical Images with Side Loss. DGM4MICCAI/DALI@MICCAI 2021: 173-183 - [c47]Mengyang Zhao, Quan Liu, Aadarsh Jha, Ruining Deng, Tianyuan Yao, Anita Mahadevan-Jansen, Matthew J. Tyska, Bryan A. Millis, Yuankai Huo:
VoxelEmbed: 3D Instance Segmentation and Tracking with Voxel Embedding based Deep Learning. MLMI@MICCAI 2021: 437-446 - [c46]Roza G. Bayrak, Colin B. Hansen, Jorge A. Salas, Nafis Ahmed, Ilwoo Lyu, Yuankai Huo, Catie Chang:
From Brain to Body: Learning Low-Frequency Respiration and Cardiac Signals from fMRI Dynamics. MICCAI (7) 2021: 553-563 - [c45]Riqiang Gao, Yucheng Tang, Kaiwen Xu, Ho Hin Lee, Steve Deppen, Kim L. Sandler, Pierre P. Massion, Thomas A. Lasko, Yuankai Huo, Bennett A. Landman:
Lung Cancer Risk Estimation with Incomplete Data: A Joint Missing Imputation Perspective. MICCAI (5) 2021: 647-656 - [i61]Quan Liu, Isabella M. Gaeta, Mengyang Zhao, Ruining Deng, Aadarsh Jha, Bryan A. Millis, Anita Mahadevan-Jansen, Matthew J. Tyska, Yuankai Huo:
Towards Annotation-free Instance Segmentation and Tracking with Adversarial Simulations. CoRR abs/2101.00567 (2021) - [i60]Zekun Wang, Pengwei Wang, Peter C. Louis, Lee E. Wheless, Yuankai Huo:
WearMask: Fast In-browser Face Mask Detection with Serverless Edge Computing for COVID-19. CoRR abs/2101.00784 (2021) - [i59]Yuzhe Lu, Haichun Yang, Zheyu Zhu, Ruining Deng, Agnes B. Fogo, Yuankai Huo:
Improve Global Glomerulosclerosis Classification with Imbalanced Data using CircleMix Augmentation. CoRR abs/2101.07654 (2021) - [i58]Xing Li, Haichun Yang, Jiaxin He, Aadarsh Jha, Agnes B. Fogo, Lee E. Wheless, Shilin Zhao, Yuankai Huo:
BEDS: Bagging ensemble deep segmentation for nucleus segmentation with testing stage stain augmentation. CoRR abs/2102.08990 (2021) - [i57]Yuzhe Lu, Aadarsh Jha, Yuankai Huo:
Contrastive Learning Meets Transfer Learning: A Case Study In Medical Image Analysis. CoRR abs/2103.03166 (2021) - [i56]Quan Liu, Peter C. Louis, Yuzhe Lu, Aadarsh Jha, Mengyang Zhao, Ruining Deng, Tianyuan Yao, Joseph T. Roland, Haichun Yang, Shilin Zhao, Lee E. Wheless, Yuankai Huo:
SimTriplet: Simple Triplet Representation Learning with a Single GPU. CoRR abs/2103.05585 (2021) - [i55]Ho Hin Lee, Yucheng Tang, Qi Yang, Xin Yu, Shunxing Bao, Bennett A. Landman, Yuankai Huo:
Attention-Guided Supervised Contrastive Learning for Semantic Segmentation. CoRR abs/2106.01596 (2021) - [i54]Mengyang Zhao, Quan Liu, Aadarsh Jha, Ruining Deng, Tianyuan Yao, Anita Mahadevan-Jansen, Matthew J. Tyska, Bryan A. Millis, Yuankai Huo:
VoxelEmbed: 3D Instance Segmentation and Tracking with Voxel Embedding based Deep Learning. CoRR abs/2106.11480 (2021) - [i53]Tianyuan Yao, Chang Qu, Quan Liu, Ruining Deng, Yuanhan Tian, Jiachen Xu, Aadarsh Jha, Shunxing Bao, Mengyang Zhao, Agnes B. Fogo, Bennett A. Landman, Catie Chang, Haichun Yang, Yuankai Huo:
Compound Figure Separation of Biomedical Images with Side Loss. CoRR abs/2107.08650 (2021) - [i52]Riqiang Gao, Yucheng Tang, Kaiwen Xu, Ho Hin Lee, Steve Deppen, Kim L. Sandler, Pierre P. Massion, Thomas A. Lasko, Yuankai Huo, Bennett A. Landman:
Lung Cancer Risk Estimation with Incomplete Data: A Joint Missing Imputation Perspective. CoRR abs/2107.11882 (2021) - [i51]Riqiang Gao, Mirza S. Khan, Yucheng Tang, Kaiwen Xu, Steve Deppen, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Technical Report: Quality Assessment Tool for Machine Learning with Clinical CT. CoRR abs/2107.12842 (2021) - [i50]Cam Nguyen, Zuhayr Asad, Yuankai Huo:
Evaluating Transformer based Semantic Segmentation Networks for Pathological Image Segmentation. CoRR abs/2108.11993 (2021) - [i49]Shunxing Bao, Yucheng Tang, Ho Hin Lee, Riqiang Gao, Sophie Chiron, Ilwoo Lyu, Lori A. Coburn, Keith T. Wilson, Joseph T. Roland, Bennett A. Landman, Yuankai Huo:
Random Multi-Channel Image Synthesis for Multiplexed Immunofluorescence Imaging. CoRR abs/2109.09004 (2021) - [i48]Ethan H. Nguyen, Haichun Yang, Ruining Deng, Yuzhe Lu, Zheyu Zhu, Joseph T. Roland, Le Lu, Bennett A. Landman, Agnes B. Fogo, Yuankai Huo:
Circle Representation for Medical Object Detection. CoRR abs/2110.12093 (2021) - 2020
- [j14]Riqiang Gao, Yuankai Huo, Shunxing Bao, Yucheng Tang, Sanja L. Antic, Emily S. Epstein, Steve Deppen, Alexis B. Paulson, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Multi-path x-D recurrent neural networks for collaborative image classification. Neurocomputing 397: 48-59 (2020) - [j13]Riqiang Gao, Yucheng Tang, Kaiwen Xu, Yuankai Huo, Shunxing Bao, Sanja L. Antic, Emily S. Epstein, Steve Deppen, Alexis B. Paulson, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Time-distanced gates in long short-term memory networks. Medical Image Anal. 65: 101785 (2020) - [c44]Fengze Liu, Jinzheng Cai, Yuankai Huo, Chi-Tung Cheng, Ashwin Raju, Dakai Jin, Jing Xiao, Alan L. Yuille, Le Lu, Chien-Hung Liao, Adam P. Harrison:
JSSR: A Joint Synthesis, Segmentation, and Registration System for 3D Multi-modal Image Alignment of Large-Scale Pathological CT Scans. ECCV (13) 2020: 257-274 - [c43]Ashwin Raju, Chi-Tung Cheng, Yuankai Huo, Jinzheng Cai, Junzhou Huang, Jing Xiao, Le Lu, Chien-Hung Liao, Adam P. Harrison:
Co-heterogeneous and Adaptive Segmentation from Multi-source and Multi-phase CT Imaging Data: A Study on Pathological Liver and Lesion Segmentation. ECCV (23) 2020: 448-465 - [c42]Yucheng Tang, Riqiang Gao, Ho Hin Lee, Quinn Stanton Wells, Ashley Spann, James G. Terry, John J. Carr, Yuankai Huo, Shunxing Bao, Bennett A. Landman:
Prediction of Type II Diabetes Onset with Computed Tomography and Electronic Medical Records. ML-CDS/CLIP@MICCAI 2020: 13-23 - [c41]Haichun Yang, Ruining Deng, Yuzhe Lu, Zheyu Zhu, Ye Chen, Joseph T. Roland, Le Lu, Bennett A. Landman, Agnes B. Fogo, Yuankai Huo:
CircleNet: Anchor-Free Glomerulus Detection with Circle Representation. MICCAI (4) 2020: 35-44 - [c40]Colin B. Hansen, Vishwesh Nath, Riqiang Gao, Camilo Bermudez, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Jeffrey D. Blume, Thomas A. Lasko, Bennett A. Landman:
Semi-supervised Machine Learning with MixMatch and Equivalence Classes. iMIMIC/MIL3ID/LABELS@MICCAI 2020: 112-121 - [c39]Zheyu Zhu, Yuzhe Lu, Ruining Deng, Haichun Yang, Agnes B. Fogo, Yuankai Huo:
EasierPath: An Open-Source Tool for Human-in-the-Loop Deep Learning of Renal Pathology. iMIMIC/MIL3ID/LABELS@MICCAI 2020: 214-222 - [c38]Roza G. Bayrak, Jorge A. Salas, Yuankai Huo, Catie Chang:
A Deep Pattern Recognition Approach for Inferring Respiratory Volume Fluctuations from fMRI Data. MICCAI (7) 2020: 428-436 - [c37]Bowen Li, Ke Yan, Dar-In Tai, Yuankai Huo, Le Lu, Jing Xiao, Adam P. Harrison:
Reliable Liver Fibrosis Assessment from Ultrasound Using Global Hetero-Image Fusion and View-Specific Parameterization. MICCAI (3) 2020: 606-615 - [c36]Camilo Bermudez, Justin A. Blaber, Samuel W. Remedios, Jess E. Reynolds, Catherine Lebel, Maureen McHugo, Stephan Heckers, Yuankai Huo, Bennett A. Landman:
Generalizing deep whole brain segmentation for pediatric and post-contrast MRI with augmented transfer learning. Medical Imaging: Image Processing 2020: 113130L - [c35]Riqiang Gao, Lingfeng Li, Yucheng Tang, Sanja L. Antic, Alexis B. Paulson, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Deep multi-task prediction of lung cancer and cancer-free progression from censored heterogenous clinical imaging. Medical Imaging: Image Processing 2020: 113130D - [c34]Ho Hin Lee, Yucheng Tang, Olivia Tang, Yuchen Xu, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Semi-supervised multi-organ segmentation through quality assurance supervision. Medical Imaging: Image Processing 2020: 113131I - [c33]Olivia Tang, Yuchen Xu, Yucheng Tang, Ho Hin Lee, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Validation and optimization of multi-organ segmentation on clinical imaging archives. Medical Imaging: Image Processing 2020: 113132O - [c32]Yucheng Tang, Ho Hin Lee, Yuchen Xu, Olivia Tang, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Camilo Bermudez, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Contrast phase classification with a generative adversarial network. Medical Imaging: Image Processing 2020: 1131310 - [c31]Yiyuan Yang, Riqiang Gao, Yucheng Tang, Sanja L. Antic, Steve Deppen, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Internal-transfer weighting of multi-task learning for lung cancer detection. Medical Imaging: Image Processing 2020: 1131323 - [c30]Yuchen Xu, Olivia Tang, Yucheng Tang, Ho Hin Lee, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Outlier guided optimization of abdominal segmentation. Medical Imaging: Image Processing 2020: 1131336 - [i47]Jinzheng Cai, Adam P. Harrison, Youjing Zheng, Ke Yan, Yuankai Huo, Jing Xiao, Lin Yang, Le Lu:
Lesion Harvester: Iteratively Mining Unlabeled Lesions and Hard-Negative Examples at Scale. CoRR abs/2001.07776 (2020) - [i46]Yuchen Xu, Olivia Tang, Yucheng Tang, Ho Hin Lee, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Outlier Guided Optimization of Abdominal Segmentation. CoRR abs/2002.04098 (2020) - [i45]Yuchen Xu, Olivia Tang, Yucheng Tang, Ho Hin Lee, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Validation and Optimization of Multi-Organ Segmentation on Clinical Imaging Archives. CoRR abs/2002.04102 (2020) - [i44]Colin B. Hansen, Vishwesh Nath, Diego A. Mesa, Yuankai Huo, Bennett A. Landman, Thomas A. Lasko:
The Value of Nullspace Tuning Using Partial Label Information. CoRR abs/2003.07921 (2020) - [i43]Fengze Liu, Jinzheng Cai, Yuankai Huo, Chi-Tung Cheng, Ashwin Raju, Dakai Jin, Jing Xiao, Alan L. Yuille, Le Lu, Chien-Hung Liao, Adam P. Harrison:
JSSR: A Joint Synthesis, Segmentation, and Registration System for 3D Multi-Modal Image Alignment of Large-scale Pathological CT Scans. CoRR abs/2005.12209 (2020) - [i42]Ashwin Raju, Chi-Tung Cheng, Yuankai Huo, Jinzheng Cai, Junzhou Huang, Jing Xiao, Le Lu, ChienHuang Liao, Adam P. Harrison:
Co-Heterogeneous and Adaptive Segmentation from Multi-Source and Multi-Phase CT Imaging Data: A Study on Pathological Liver and Lesion Segmentation. CoRR abs/2005.13201 (2020) - [i41]Haichun Yang, Ruining Deng, Yuzhe Lu, Zheyu Zhu, Ye Chen, Joseph T. Roland, Le Lu, Bennett A. Landman, Agnes B. Fogo, Yuankai Huo:
CircleNet: Anchor-free Detection with Circle Representation. CoRR abs/2006.02474 (2020) - [i40]Ruining Deng, Haichun Yang, Aadarsh Jha, Yuzhe Lu, Peng Chu, Agnes B. Fogo, Yuankai Huo:
Map3D: Registration Based Multi-Object Tracking on 3D Serial Whole Slide Images. CoRR abs/2006.06038 (2020) - [i39]Yuankai Huo, Jinzheng Cai, Chi-Tung Cheng, Ashwin Raju, Ke Yan, Bennett A. Landman, Jing Xiao, Le Lu, Chien-Hung Liao, Adam P. Harrison:
Harvesting, Detecting, and Characterizing Liver Lesions from Large-scale Multi-phase CT Data via Deep Dynamic Texture Learning. CoRR abs/2006.15691 (2020) - [i38]Aadarsh Jha, Haichun Yang, Ruining Deng, Meghan E. Kapp, Agnes B. Fogo, Yuankai Huo:
Instance Segmentation for Whole Slide Imaging: End-to-End or Detect-Then-Segment. CoRR abs/2007.03593 (2020) - [i37]Zheyu Zhu, Yuzhe Lu, Ruining Deng, Haichun Yang, Agnes B. Fogo, Yuankai Huo:
EasierPath: An Open-source Tool for Human-in-the-loop Deep Learning of Renal Pathology. CoRR abs/2007.13952 (2020) - [i36]Mengyang Zhao, Aadarsh Jha, Quan Liu, Bryan A. Millis, Anita Mahadevan-Jansen, Le Lu, Bennett A. Landman, Matthew J. Tyskac, Yuankai Huo:
Faster Mean-shift: GPU-accelerated Embedding-clustering for Cell Segmentation and Tracking. CoRR abs/2007.14283 (2020) - [i35]Bowen Li, Ke Yan, Dar-In Tai, Yuankai Huo, Le Lu, Jing Xiao, Adam P. Harrison:
Reliable Liver Fibrosis Assessment from Ultrasound using Global Hetero-Image Fusion and View-Specific Parameterization. CoRR abs/2008.03352 (2020) - [i34]Riqiang Gao, Yucheng Tang, Kaiwen Xu, Michael N. Kammer, Sanja L. Antic, Steve Deppen, Kim L. Sandler, Pierre P. Massion, Yuankai Huo, Bennett A. Landman:
Deep Multi-path Network Integrating Incomplete Biomarker and Chest CT Data for Evaluating Lung Cancer Risk. CoRR abs/2010.09524 (2020) - [i33]Quan Liu, Isabella M. Gaeta, Bryan A. Millis, Matthew J. Tyska, Yuankai Huo:
GAN based Unsupervised Segmentation: Should We Match the Exact Number of Objects. CoRR abs/2010.11438 (2020) - [i32]Ruining Deng, Quan Liu, Shunxing Bao, Aadarsh Jha, Catie Chang, Bryan A. Millis, Matthew J. Tyska, Yuankai Huo:
CaCL: Class-aware Codebook Learning for Weakly Supervised Segmentation on Diffuse Image Patterns. CoRR abs/2011.00794 (2020) - [i31]Quan Liu, Isabella M. Gaeta, Mengyang Zhao, Ruining Deng, Aadarsh Jha, Bryan A. Millis, Anita Mahadevan-Jansen, Matthew J. Tyska, Yuankai Huo:
ASIST: Annotation-free synthetic instance segmentation and tracking for microscope video analysis. CoRR abs/2011.01009 (2020) - [i30]Kaiwen Xu, Riqiang Gao, Mirza S. Khan, Shunxing Bao, Yucheng Tang, Steve A. Deppen, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Mattias P. Heinrich, Bennett A. Landman:
Development and Characterization of a Chest CT Atlas. CoRR abs/2012.03124 (2020) - [i29]Bolin Lai, Xiaoyu Bai, Yuhsuan Wu, Xiao-Yun Zhou, Peng Wang, Jinzheng Cai, Yuankai Huo, Lingyun Huang, Yong Xia, Jing Xiao, Le Lu, Heping Hu, Adam P. Harrison:
Fully-Automated Liver Tumor Localization and Characterization from Multi-Phase MR Volumes Using Key-Slice ROI Parsing: A Physician-Inspired Approach. CoRR abs/2012.06964 (2020) - [i28]Ye Chen, Yuankai Huo:
Limitation of Acyclic Oriented Graphs Matching as Cell Tracking Accuracy Measure when Evaluating Mitosis. CoRR abs/2012.12084 (2020) - [i27]Ho Hin Lee, Yucheng Tang, Shunxing Bao, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
RAP-Net: Coarse-to-Fine Multi-Organ Segmentation with Single Random Anatomical Prior. CoRR abs/2012.12425 (2020) - [i26]Ho Hin Lee, Yucheng Tang, Kaiwen Xu, Shunxing Bao, Agnes B. Fogo, Raymond Harris, Mark P. de Caestecker, Mattias P. Heinrich, Jeffrey M. Spraggins, Yuankai Huo, Bennett A. Landman:
Multi-Contrast Computed Tomography Healthy Kidney Atlas. CoRR abs/2012.12432 (2020)
2010 – 2019
- 2019
- [j12]Hyeonsoo Moon, Yuankai Huo, Richard G. Abramson, Richard Alan Peters, Albert Assad, Tamara K. Moyo, Michael R. Savona, Bennett A. Landman:
Acceleration of spleen segmentation with end-to-end deep learning method and automated pipeline. Comput. Biol. Medicine 107: 109-117 (2019) - [j11]Ana Gainaru, Hongyang Sun, Guillaume Aupy, Yuankai Huo, Bennett A. Landman, Padma Raghavan:
On-the-fly scheduling versus reservation-based scheduling for unpredictable workflows. Int. J. High Perform. Comput. Appl. 33(6) (2019) - [j10]Owen A. Williams, Yang An, Lori Beason-Held, Yuankai Huo, Luigi Ferrucci, Bennett A. Landman, Susan M. Resnick:
Vascular burden and APOE ε4 are associated with white matter microstructural decline in cognitively normal older adults. NeuroImage 188: 572-583 (2019) - [j9]Yuankai Huo, Zhoubing Xu, Yunxi Xiong, Katherine Aboud, Prasanna Parvathaneni, Shunxing Bao, Camilo Bermudez, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman:
3D whole brain segmentation using spatially localized atlas network tiles. NeuroImage 194: 105-119 (2019) - [j8]Yuankai Huo, Zhoubing Xu, Hyeonsoo Moon, Shunxing Bao, Albert Assad, Tamara K. Moyo, Michael R. Savona, Richard G. Abramson, Bennett A. Landman:
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth. IEEE Trans. Medical Imaging 38(4): 1016-1025 (2019) - [j7]Yuankai Huo, Zhoubing Xu, Shunxing Bao, Camilo Bermudez, Hyeonsoo Moon, Prasanna Parvathaneni, Tamara K. Moyo, Michael R. Savona, Albert Assad, Richard G. Abramson, Bennett A. Landman:
Splenomegaly Segmentation on Multi-Modal MRI Using Deep Convolutional Networks. IEEE Trans. Medical Imaging 38(5): 1185-1196 (2019) - [c29]Vishwesh Nath, Kurt G. Schilling, Samuel Remedios, Roza G. Bayrak, Yurui Gao, Justin A. Blaber, Yuankai Huo, Bennett A. Landman, Adam W. Anderson:
Learning 3D White Matter Microstructure from 2D Histology. ISBI 2019: 186-190 - [c28]Riqiang Gao, Yuankai Huo, Shunxing Bao, Yucheng Tang, Sanja L. Antic, Emily S. Epstein, Aneri B. Balar, Steve Deppen, Alexis B. Paulson, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Distanced LSTM: Time-Distanced Gates in Long Short-Term Memory Models for Lung Cancer Detection. MLMI@MICCAI 2019: 310-318 - [c27]Prasanna Parvathaneni, Shunxing Bao, Vishwesh Nath, Neil D. Woodward, Daniel O. Claassen, Carissa J. Cascio, David H. Zald, Yuankai Huo, Bennett A. Landman, Ilwoo Lyu:
Cortical Surface Parcellation Using Spherical Convolutional Neural Networks. MICCAI (3) 2019: 501-509 - [c26]Vishwesh Nath, Ilwoo Lyu, Kurt G. Schilling, Prasanna Parvathaneni, Colin B. Hansen, Yuankai Huo, Vaibhav A. Janve, Yurui Gao, Iwona Stepniewska, Adam W. Anderson, Bennett A. Landman:
Enabling Multi-shell b-Value Generalizability of Data-Driven Diffusion Models with Deep SHORE. MICCAI (3) 2019: 573-581 - [c25]Vishwesh Nath, Samuel Remedios, Prasanna Parvathaneni, Colin B. Hansen, Roza G. Bayrak, Camilo Bermudez, Justin A. Blaber, Kurt G. Schilling, Vaibhav A. Janve, Yurui Gao, Yuankai Huo, Ilwoo Lyu, Owen A. Williams, Susan M. Resnick, Lori Beason-Held, Baxter P. Rogers, Iwona Stepniewska, Adam W. Anderson, Bennett A. Landman:
Harmonizing 1.5T/3T diffusion weighted MRI through development of deep learning stabilized microarchitecture estimators. Medical Imaging: Image Processing 2019: 109490O - [c24]Jiachen Wang, Riqiang Gao, Yuankai Huo, Shunxing Bao, Yunxi Xiong, Sanja L. Antic, Travis J. Osterman, Pierre P. Massion, Bennett A. Landman:
Lung cancer detection using co-learning from chest CT images and clinical demographics. Medical Imaging: Image Processing 2019: 109491G - [c23]Cailey I. Kerley, Yuankai Huo, Shikha Chaganti, Shunxing Bao, Mayur B. Patel, Bennett A. Landman:
Montage based 3D medical image retrieval from traumatic brain injury cohort using deep convolutional neural network. Medical Imaging: Image Processing 2019: 109492U - [c22]Yunxi Xiong, Yuankai Huo, Jiachen Wang, Larry Taylor Davis, Maureen McHugo, Bennett A. Landman:
Reproducibility evaluation of SLANT whole brain segmentation across clinical magnetic resonance imaging protocols. Medical Imaging: Image Processing 2019: 109492V - [c21]Yucheng Tang, Yuankai Huo, Yunxi Xiong, Hyeonsoo Moon, Albert Assad, Tamara K. Moyo, Michael R. Savona, Richard G. Abramson, Bennett A. Landman:
Improving splenomegaly segmentation by learning from heterogeneous multi-source labels. Medical Imaging: Image Processing 2019: 1094908 - [c20]Yuankai Huo, James G. Terry, Jiachen Wang, Vishwesh Nath, Camilo Bermudez, Shunxing Bao, Prasanna Parvathaneni, J. Jeffrey Carr, Bennett A. Landman:
Coronary calcium detection using 3D attention identical dual deep network based on weakly supervised learning. Medical Imaging: Image Processing 2019: 1094917 - [c19]Camilo Bermudez, William Rodriguez, Yuankai Huo, Allison E. Hainline, Rui Li, Robert Shults, Pierre D. D'Haese, Peter E. Konrad, Benoit M. Dawant, Bennett A. Landman:
Towards machine learning prediction of deep brain stimulation (DBS) intra-operative efficacy maps. Medical Imaging: Image Processing 2019: 1094922 - [i25]Yunxi Xiong, Yuankai Huo, Jiachen Wang, Larry Taylor Davis, Maureen McHugo, Bennett A. Landman:
Reproducibility Evaluation of SLANT Whole Brain Segmentation Across Clinical Magnetic Resonance Imaging Protocols. CoRR abs/1901.02040 (2019) - [i24]Jiachen Wang, Riqiang Gao, Yuankai Huo, Shunxing Bao, Yunxi Xiong, Sanja Antic, Travis Osterman, Pierre P. Massion, Bennett A. Landman:
Lung Cancer Detection using Co-learning from Chest CT Images and Clinical Demographics. CoRR abs/1902.08236 (2019) - [i23]Yuankai Huo, Zhoubing Xu, Yunxi Xiong, Katherine Aboud, Prasanna Parvathaneni, Shunxing Bao, Camilo Bermudez, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman:
3D Whole Brain Segmentation using Spatially Localized Atlas Network Tiles. CoRR abs/1903.12152 (2019) - [i22]Yuankai Huo, James G. Terry, Jiachen Wang, Sangeeta Nair, Thomas A. Lasko, Barry I. Freedman, J. Jeffrey Carr, Bennett A. Landman:
Fully Automatic Liver Attenuation Estimation Combing CNN Segmentation and Morphological Operations. CoRR abs/1906.09549 (2019) - [i21]Vishwesh Nath, Ilwoo Lyu, Kurt G. Schilling, Prasanna Parvathaneni, Colin B. Hansen, Yucheng Tang, Yuankai Huo, Vaibhav A. Janve, Yurui Gao, Iwona Stepniewska, Adam W. Anderson, Bennett A. Landman:
Enabling Multi-Shell b-Value Generalizability of Data-Driven Diffusion Models with Deep SHORE. CoRR abs/1907.06319 (2019) - [i20]Camilo Bermudez, Justin A. Blaber, Samuel W. Remedios, Jess E. Reynolds, Catherine Lebel, Maureen McHugo, Stephan Heckers, Yuankai Huo, Bennett A. Landman:
Generalizing Deep Whole Brain Segmentation for Pediatric and Post-Contrast MRI with Augmented Transfer Learning. CoRR abs/1908.04702 (2019) - [i19]Riqiang Gao, Yuankai Huo, Shunxing Bao, Yucheng Tang, Sanja L. Antic, Emily S. Epstein, Aneri B. Balar, Steve Deppen, Alexis B. Paulson, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Distanced LSTM: Time-Distanced Gates in Long Short-Term Memory Models for Lung Cancer Detection. CoRR abs/1909.05321 (2019) - [i18]Ho Hin Lee, Yucheng Tang, Olivia Tang, Yuchen Xu, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Semi-Supervised Multi-Organ Segmentation through Quality Assurance Supervision. CoRR abs/1911.05113 (2019) - [i17]Riqiang Gao, Lingfeng Li, Yucheng Tang, Sanja L. Antic, Alexis B. Paulson, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Deep Multi-task Prediction of Lung Cancer and Cancer-free Progression from Censored Heterogenous Clinical Imaging. CoRR abs/1911.05115 (2019) - [i16]Yucheng Tang, Ho Hin Lee, Yuchen Xu, Olivia Tang, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Camilo Bermudez, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman:
Contrast Phase Classification with a Generative Adversarial Network. CoRR abs/1911.06395 (2019) - [i15]Yuankai Huo, Yucheng Tang, Yunqiang Chen, Dashan Gao, Shizhong Han, Shunxing Bao, Smita De, James G. Terry, J. Jeffrey Carr, Richard G. Abramson, Bennett A. Landman:
Stochastic tissue window normalization of deep learning on computed tomography. CoRR abs/1912.00420 (2019) - [i14]Yiyuan Yang, Riqiang Gao, Yucheng Tang, Sanja L. Antic, Steve Deppen, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Bennett A. Landman:
Internal-transfer Weighting of Multi-task Learning for Lung Cancer Detection. CoRR abs/1912.07167 (2019) - 2018
- [j6]Yuankai Huo, Justin A. Blaber, Stephen M. Damon, Brian D. Boyd, Shunxing Bao, Prasanna Parvathaneni, Camilo Bermudez, Shikha Chaganti, Vishwesh Nath, Jasmine M. Greer, Ilwoo Lyu, William R. French, Allen T. Newton, Baxter P. Rogers, Bennett A. Landman:
Towards Portable Large-Scale Image Processing with High-Performance Computing. J. Digit. Imaging 31(3): 304-314 (2018) - [j5]Yuankai Huo, Jiaqi Liu, Zhoubing Xu, Robert L. Harrigan, Albert Assad, Richard G. Abramson, Bennett A. Landman:
Robust Multicontrast MRI Spleen Segmentation for Splenomegaly Using Multi-Atlas Segmentation. IEEE Trans. Biomed. Eng. 65(2): 336-343 (2018) - [c18]Shunxing Bao, Prasanna Parvathaneni, Yuankai Huo, Yogesh D. Barve, Andrew J. Plassard, Yuang Yao, Hongyang Sun, Ilwoo Lyu, David H. Zald, Bennett A. Landman, Aniruddha S. Gokhale:
Technology Enablers for Big Data, Multi-Stage Analysis in Medical Image Processing. IEEE BigData 2018: 1337-1346 - [c17]Yuankai Huo, Zhoubing Xu, Shunxing Bao, Albert Assad, Richard G. Abramson, Bennett A. Landman:
Adversarial synthesis learning enables segmentation without target modality ground truth. ISBI 2018: 1217-1220 - [c16]Sandra González-Villà, Yuankai Huo, Arnau Oliver, Xavier Lladó, Bennett A. Landman:
Multi-atlas Parcellation in the Presence of Lesions: Application to Multiple Sclerosis. Patch-MI@MICCAI 2018: 104-113 - [c15]Yuankai Huo, Zhoubing Xu, Katherine Aboud, Prasanna Parvathaneni, Shunxing Bao, Camilo Bermudez, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman:
Spatially Localized Atlas Network Tiles Enables 3D Whole Brain Segmentation from Limited Data. MICCAI (3) 2018: 698-705 - [c14]Zhoubing Xu, Yuankai Huo, Jin Hyeong Park, Bennett A. Landman, Andy Milkowski, Sasa Grbic, Shaohua Kevin Zhou:
Less is More: Simultaneous View Classification and Landmark Detection for Abdominal Ultrasound Images. MICCAI (2) 2018: 711-719 - [c13]Meg F. Bobo, Shunxing Bao, Yuankai Huo, Yuang Yao, Jack Virostko, Andrew J. Plassard, Ilwoo Lyu, Albert Assad, Richard G. Abramson, Melissa A. Hilmes, Bennett A. Landman:
Fully convolutional neural networks improve abdominal organ segmentation. Medical Imaging: Image Processing 2018: 105742V - [c12]Prasanna Parvathaneni, Ilwoo Lyu, Yuankai Huo, Justin A. Blaber, Allison E. Hainline, Hakmook Kang, Neil D. Woodward, Bennett A. Landman:
Constructing statistically unbiased cortical surface templates using feature-space covariance. Medical Imaging: Image Processing 2018: 1057406 - [c11]