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Alberto M. R. Dávila
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2020 – today
- 2021
- [j8]Maria Luiza Machado Campos, Eugênio Silva, Renato Cerceau
, Sérgio Manuel Serra da Cruz, Fabrício Alves Barbosa da Silva, Fábio Castro Gouveia, Rodrigo Jardim, Nelson Kotowski
, Giseli Rabello Lopes, Alberto M. R. Dávila
:
Towards Machine-Readable (Meta) Data and the FAIR Value for Artificial Intelligence Exploration of COVID-19 and Cancer Research Data. Frontiers Big Data 4: 656553 (2021)
2010 – 2019
- 2017
- [j7]Marcelo Rodrigo de Castro, Catherine dos Santos Tostes, Alberto M. R. Dávila
, Hermes Senger
, Fabrício Alves Barbosa da Silva:
SparkBLAST: scalable BLAST processing using in-memory operations. BMC Bioinform. 18(1): 318 (2017) - [j6]Abel Carrión, Miguel Caballer, Ignacio Blanquer, Nelson Kotowski, Rodrigo Jardim, Alberto M. R. Dávila:
Managing workflows on top of a cloud computing orchestrator for using heterogeneous environments on e-Science. Int. J. Web Grid Serv. 13(4): 375-402 (2017) - 2012
- [c6]Edgar Sarmiento
, Karin K. Breitman
, Alberto M. R. Dávila
, José Viterbo
:
A framework for readapting and running bioinformatics applications in the cloud. RACS 2012: 86-91 - 2011
- [j5]Fábio Coutinho, Eduardo S. Ogasawara
, Daniel de Oliveira, Vanessa Braganholo, Alexandre A. B. Lima, Alberto M. R. Dávila
, Marta Mattoso
:
Many task computing for orthologous genes identification in protozoan genomes using Hydra. Concurr. Comput. Pract. Exp. 23(17): 2326-2337 (2011) - [c5]Hugo Saldanha, Edward de Oliveira Ribeiro, Maristela Holanda, Aletéia P. F. Araújo, Genaína Nunes Rodrigues, Maria Emília Telles Walter, João Carlos Setubal, Alberto M. R. Dávila:
A Cloud Architecture for Bioinformatics Workflows. CLOSER 2011: 477-483 - [c4]Kary A. C. S. Ocaña
, Daniel de Oliveira, Eduardo S. Ogasawara
, Alberto M. R. Dávila
, Alexandre A. B. Lima, Marta Mattoso
:
SciPhy: A Cloud-Based Workflow for Phylogenetic Analysis of Drug Targets in Protozoan Genomes. BSB 2011: 66-70 - 2010
- [j4]Sérgio Manuel Serra da Cruz, Vanessa Batista, Edno Silva, Frederico Tosta, Clarissa Vilela, Rafael R. C. Cuadrat
, Diogo A. Tschoeke
, Alberto M. R. Dávila
, Maria Luiza Machado Campos, Marta Mattoso
:
Detecting distant homologies on protozoans metabolic pathways using scientific workflows. Int. J. Data Min. Bioinform. 4(3): 256-280 (2010) - [c3]Fábio Coutinho, Eduardo S. Ogasawara
, Daniel de Oliveira
, Vanessa Braganholo, Alexandre A. B. Lima, Alberto M. R. Dávila
, Marta Mattoso
:
Data parallelism in bioinformatics workflows using Hydra. HPDC 2010: 507-515
2000 – 2009
- 2008
- [j3]Alberto M. R. Dávila
, Pablo N. Mendes
, Glauber Wagner
, Diogo A. Tschoeke
, Rafael R. C. Cuadrat
, Felipe Liberman, Luciana Matos, Thiago S. Satake, Kary A. C. S. Ocaña
, Omar Triana
, Sérgio Manuel Serra da Cruz, Henrique C. L. Jucá, Juliano C. Cury
, Fabrício Nogueira da Silva, Guilherme A. Geronimo, Margarita Ruiz, Eduardo Ruback, Floriano P. Silva Jr.
, Christian M. Probst
, Edmundo C. Grisard
, Marco A. Krieger
, Samuel Goldenberg, Maria Cláudia Reis Cavalcanti
, Milton O. Moraes
, Maria Luiza Machado Campos, Marta Mattoso
:
ProtozoaDB: dynamic visualization and exploration of protozoan genomes. Nucleic Acids Res. 36(Database-Issue): 547-552 (2008) - [c2]Sérgio Manuel Serra da Cruz, Vanessa Batista, Alberto M. R. Dávila
, Edno Silva, Frederico Tosta, Clarissa Vilela, Maria Luiza Machado Campos, Rafael R. C. Cuadrat, Diogo A. Tschoeke, Marta Mattoso
:
OrthoSearch: a scientific workflow approach to detect distant homologies on protozoans. SAC 2008: 1282-1286 - 2007
- [j2]Juliana S. Bernardes, Alberto M. R. Dávila
, Vítor Santos Costa
, Gerson Zaverucha:
Improving model construction of profile HMMs for remote homology detection through structural alignment. BMC Bioinform. 8 (2007) - [i1]Juliana S. Bernardes, Alberto M. R. Dávila, Vítor Santos Costa
, Gerson Zaverucha:
A study of structural properties on profiles HMMs. CoRR abs/0704.2010 (2007) - 2006
- [c1]Fabrício Nogueira da Silva, Maria Cláudia Cavalcanti
, Alberto M. R. Dávila:
In Services: Data Management for In Silico Workflows. DEXA Workshops 2006: 206-210 - 2005
- [j1]Alberto M. R. Dávila
, Daniel M. Lorenzini, Pablo N. Mendes
, Thiago S. Satake, Gabriel R. Sousa, Linair Maria Campos, Camila J. Mazzoni, Glauber Wagner
, Paulo F. Pires
, Edmundo C. Grisard
, Maria Cláudia Reis Cavalcanti
, Maria Luiza Machado Campos:
GARSA: genomic analysis resources for sequence annotation. Bioinform. 21(23): 4302-4303 (2005)
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