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ORCIDHugh P. Shanahan
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2020 – today
- 2023
[j13]Jamie J. Alnasir
, Hugh P. Shanahan:
Intra-Exon Motif Correlations as a Proxy Measure for Mean Per-Tile Sequence Quality Data in RNA-Seq. J. Comput. Biol. 30(2): 131-148 (2023)- [c3]Robert Quick, Marcela Alfaro Cordoba, Stephen Diggs, Raphael Cobe, Louise Bezuidenhout, Hugh P. Shanahan, Bianca Peterson:
Foundational Data Science Training for Health Equity Researchers at Minority Serving Institutions: A SoRDS Event. ICHI 2023: 663-667 - 2022
- [j12]Hugh P. Shanahan, Louise Bezuidenhout:
Rethinking the A in FAIR Data: Issues of Data Access and Accessibility in Research. Frontiers Res. Metrics Anal. 7 (2022) - 2021
- [j11]Louise Bezuidenhout, Sara Drummond-Curtis, Bridget Walker, Hugh P. Shanahan, Marcela Alfaro Cordoba:
A School and a Network: CODATA-RDA Data Science Summer Schools Alumni Survey. Data Sci. J. 20: 10 (2021) - [j10]Hugh P. Shanahan, Nancy Hoebelheinrich, Angus Whyte:
Progress toward a comprehensive teaching approach to the FAIR data principles. Patterns 2(10): 100324 (2021) - 2020
- [j9]Jamie J. Alnasir, Hugh P. Shanahan:
The application of Hadoop in structural bioinformatics. Briefings Bioinform. 21(1): 96-105 (2020) - [j8]Peter McQuilton, Dominique Batista, Oya Beyan, Ramón Granell, Simon J. Coles, Massimiliano Izzo, Allyson L. Lister, Robert Pergl, Philippe Rocca-Serra, Ben Schaap, Hugh P. Shanahan, Milo Thurston, Susanna-Assunta Sansone:
Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data. Data Intell. 2(1-2): 151-157 (2020) - [j7]Daniel Bangert, Joy Davidson, Steve Diggs, Marjan Grootveld, Hugh P. Shanahan, Shanmugasundaram Venkataraman:
The CODATA-RDA Data Steward School. Int. J. Digit. Curation 15(1): 1-6 (2020) - [j6]Louise Bezuidenhout, Robert Quick, Hugh P. Shanahan:
"Ethics When You Least Expect It": A Modular Approach to Short Course Data Ethics Instruction. Sci. Eng. Ethics 26(4): 2189-2213 (2020)
2010 – 2019
- 2019
- [i1]Peter Wittenburg, Hana Pergl Sustkova, Annalisa Montesanti, Margreet Bloemers, S. H. de Waard, Mark A. Musen, John Graybeal, Kristina M. Hettne, Annika Jacobsen, Robert Pergl, Rob W. W. Hooft, Christine Staiger, Celia W. G. van Gelder, Sebastiaan L. Knijnenburg, A. C. van Arkel, Bert Meerman, Mark D. Wilkinson, Susanna-Assunta Sansone, Philippe Rocca-Serra, Peter McQuilton, Alejandra N. González-Beltrán, G. J. C. Aben, Patrícia Henning, Maria Simone de Menezes Alencar, C. Ribeiro, C. R. L. Silva, Luís Fernando Sayão, Luana Sales, Viviane Veiga, Jefferson Lima, Simone Dib, Paula Xavier dos Santos, R. Murtinho, Jakob Tendel, B. F. Schaap, P. M. Brouwer, A. K. Gavai, Yamine Bouzembrak, Hans J. P. Marvin, Albert Mons, Tobias Kuhn, Alessa A. Gambardella, Ricardo de Miranda Azevedo, Vesa Muhonen, Mira van der Naald, N. W. Smit, M. J. Buys, Taco F. de Bruin, Fieke Schoots, H. J. E. Goodson, Henry S. Rzepa, Keith G. Jeffery, Hugh P. Shanahan, M. Axton, Veniamin Tkachenko, Anne Deslattes Mays, Natalie Meyers, Michael Conlon, Laurel L. Haak, Erik A. Schultes:
The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data. CoRR abs/1902.11162 (2019) - 2018
- [j5]Jamie J. Alnasir, Hugh P. Shanahan:
Transcriptomics: Quantifying Non-Uniform Read Distribution Using MapReduce. Int. J. Found. Comput. Sci. 29(8): 1355-1372 (2018) - [c2]Golestan Sally Radwan, Hugh P. Shanahan:
Systems Metagenomics: Applying Systems Biology Thinking to Human Microbiome Analysis. CMSB 2018: 318-321 - 2017
- [j4]Jamie J. Alnasir, Hugh P. Shanahan:
A Novel Method to Detect Bias in Short Read NGS Data. J. Integr. Bioinform. 14(3) (2017) - [j3]Ming Chen, Andrew P. Harrison, Hugh P. Shanahan, Yuriy L. Orlov:
Biological Big Bytes: Integrative Analysis of Large Biological Datasets. J. Integr. Bioinform. 14(3) (2017) - 2014
- [p1]Andrew P. Harrison, Hugh P. Shanahan:
An Overview of Gene Regulation. Approaches in Integrative Bioinformatics 2014: 21-69
2000 – 2009
- 2009
- [c1]Hugh P. Shanahan:
Can we improve on the identification of transcription factor binding sites? KDD Workshop on Statistical and Relational Learning in Bioinformatics 2009: 39-40 - 2005
- [j2]Carles Ferrer-Costa, Hugh P. Shanahan, Susan Jones, Janet M. Thornton:
HTHquery: a method for detecting DNA-binding proteins with a helix-turn-helix structural motif. Bioinform. 21(18): 3679-3680 (2005) - 2004
- [j1]Hugh P. Shanahan, Janet M. Thornton:
An examination of the conservation of surface patch polarity for proteins. Bioinform. 20(14): 2197-2204 (2004)
Coauthor Index
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