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ORCIDTatjana Petrov
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2020 – today
- 2023
[c25]Luca Bortolussi, Francesca Cairoli, Julia Klein, Tatjana Petrov:
Data-Driven Inference of Chemical Reaction Networks via Graph-Based Variational Autoencoders. QEST 2023: 143-147- 2022
- [j9]Tatjana Petrov
, Matej Hajnal, Julia Klein, David Safránek, Morgane Nouvian:
Extracting individual characteristics from population data reveals a negative social effect during honeybee defence. PLoS Comput. Biol. 18(9): 1010305 (2022) - [c24]Julia Klein, Tatjana Petrov:
Understanding Social Feedback in Biological Collectives with Smoothed Model Checking. ISoLA (3) 2022: 181-198 - 2021
- [j8]Tatjana Petrov, Stefano Tognazzi:
Exact and approximate role assignment for multi-layer networks. J. Complex Networks 9(5) (2021) - [j7]Denis Repin, Tatjana Petrov:
Automated deep abstractions for stochastic chemical reaction networks. Inf. Comput. 281: 104788 (2021) - [j6]Tatjana Petrov, Claudia Igler, Ali Sezgin, Thomas A. Henzinger, Calin C. Guet:
Long lived transients in gene regulation. Theor. Comput. Sci. 893: 1-16 (2021) - [c23]Tatjana Petrov, Stefano Tognazzi:
Lumping Reductions for Multispread in Multi-Layer Networks. COMPLEX NETWORKS 2021: 289-300 - [c22]Matej Hajnal, David Safránek, Tatjana Petrov:
DiPS: A Tool for Data-Informed Parameter Synthesis for Markov Chains from Multiple-Property Specifications. EPEW 2021: 79-95 - 2020
- [c21]Pavol Bokes, Julia Klein, Tatjana Petrov:
Accelerating Reactions at the DNA Can Slow Down Transient Gene Expression. CMSB 2020: 44-60 - [c20]Tatjana Petrov, Stefano Tognazzi:
Centrality-Preserving Exact Reductions of Multi-Layer Networks. ISoLA (2) 2020: 397-415 - [c19]Denis Repin, Nhat-Huy Phung, Tatjana Petrov:
StochNetV2: A Tool for Automated Deep Abstractions for Stochastic Reaction Networks. QEST 2020: 27-32 - [c18]Ankit Gupta, Tatjana Petrov:
Preface. SASB 2020: 1-2 - [c17]Andreea Beica, Jérôme Feret, Tatjana Petrov:
Tropical Abstraction of Biochemical Reaction Networks with Guarantees. SASB 2020: 3-32 - [e2]Alessandro Abate, Tatjana Petrov, Verena Wolf:
Computational Methods in Systems Biology - 18th International Conference, CMSB 2020, Konstanz, Germany, September 23-25, 2020, Proceedings. Lecture Notes in Computer Science 12314, Springer 2020, ISBN 978-3-030-60326-7 [contents] - [e1]Ankit Gupta, Tatjana Petrov:
Proceedings of SASB 2018, the Ninth International Workshop on Static Analysis and Systems Biology, Freiburg, Germany - August 28th, 2018. Electronic Notes in Theoretical Computer Science 350, Elsevier 2020 [contents] - [i8]Tatjana Petrov, Denis Repin:
Automated Deep Abstractions for Stochastic Chemical Reaction Networks. CoRR abs/2002.01889 (2020)
2010 – 2019
- 2019
- [c16]Calin C. Guet, Thomas A. Henzinger, Claudia Igler, Tatjana Petrov, Ali Sezgin:
Transient Memory in Gene Regulation. CMSB 2019: 155-187 - [c15]Matej Hajnal, Morgane Nouvian, Tatjana Petrov, David Safránek:
Data-Informed Parameter Synthesis for Population Markov Chains. CMSB 2019: 383-386 - [c14]Matej Hajnal, Morgane Nouvian, David Safránek, Tatjana Petrov:
Data-Informed Parameter Synthesis for Population Markov Chains. HSB 2019: 147-164 - 2018
- [i7]Tatjana Petrov:
Markov chain aggregation and its application to rule-based modelling. CoRR abs/1812.09774 (2018) - 2017
- [j5]Mirco Giacobbe, Calin C. Guet, Ashutosh Gupta, Thomas A. Henzinger, Tiago Paixão, Tatjana Petrov:
Model checking the evolution of gene regulatory networks. Acta Informatica 54(8): 765-787 (2017) - [j4]Przemyslaw Daca, Thomas A. Henzinger, Jan Kretínský, Tatjana Petrov:
Faster Statistical Model Checking for Unbounded Temporal Properties. ACM Trans. Comput. Log. 18(2): 12:1-12:25 (2017) - 2016
- [c13]Przemyslaw Daca, Thomas A. Henzinger, Jan Kretínský, Tatjana Petrov:
Linear Distances between Markov Chains. CONCUR 2016: 20:1-20:15 - [c12]Przemyslaw Daca, Thomas A. Henzinger, Jan Kretínský, Tatjana Petrov:
Faster Statistical Model Checking for Unbounded Temporal Properties. TACAS 2016: 112-129 - [i6]Przemyslaw Daca, Thomas A. Henzinger, Jan Kretínský, Tatjana Petrov:
Linear Distances between Markov Chains. CoRR abs/1605.00186 (2016) - 2015
- [j3]Bernhard C. Geiger, Tatjana Petrov, Gernot Kubin, Heinz Koeppl:
Optimal Kullback-Leibler Aggregation via Information Bottleneck. IEEE Trans. Autom. Control. 60(4): 1010-1022 (2015) - [c11]Andreea Beica, Calin C. Guet, Tatjana Petrov:
Efficient Reduction of Kappa Models by Static Inspection of the Rule-Set. HSB 2015: 173-191 - [c10]Mirco Giacobbe, Calin C. Guet, Ashutosh Gupta, Thomas A. Henzinger, Tiago Paixão, Tatjana Petrov:
Model Checking Gene Regulatory Networks. TACAS 2015: 469-483 - [i5]Andreea Beica, Calin C. Guet, Tatjana Petrov:
Efficient reduction of Kappa models by static inspection of the rule-set. CoRR abs/1501.00440 (2015) - [i4]Przemyslaw Daca, Thomas A. Henzinger, Jan Kretínský, Tatjana Petrov:
Faster Statistical Model Checking for Unbounded Temporal Properties. CoRR abs/1504.05739 (2015) - 2014
- [i3]Mirco Giacobbe, Calin C. Guet, Ashutosh Gupta, Thomas A. Henzinger, Tiago Paixão, Tatjana Petrov:
Model Checking Gene Regulatory Networks. CoRR abs/1410.7704 (2014) - 2013
- [j2]Jérôme Feret, Heinz Koeppl, Tatjana Petrov:
Stochastic Fragments: A Framework for the Exact Reduction of the Stochastic Semantics of Rule-Based Models. Int. J. Softw. Informatics 7(4): 527-604 (2013) - [c9]Michael Klann, Loïc Paulevé, Tatjana Petrov, Heinz Koeppl:
Coarse-Grained Brownian Dynamics Simulation of Rule-Based Models. CMSB 2013: 64-77 - [c8]Tatjana Petrov, Heinz Koeppl:
Approximate model reductions for combinatorial reaction systems. ECC 2013: 4172-4177 - [i2]Arnab Ganguly, Tatjana Petrov, Heinz Koeppl:
Markov chain aggregation and its applications to combinatorial reaction networks. CoRR abs/1303.4532 (2013) - [i1]Bernhard C. Geiger, Tatjana Petrov, Gernot Kubin, Heinz Koeppl:
Optimal Kullback-Leibler Aggregation via Information Bottleneck. CoRR abs/1304.6603 (2013) - 2012
- [j1]Jérôme Feret, Thomas A. Henzinger, Heinz Koeppl, Tatjana Petrov:
Lumpability abstractions of rule-based systems. Theor. Comput. Sci. 431: 137-164 (2012) - [c7]Tatjana Petrov, Jérôme Feret, Heinz Koeppl:
Reconstructing species-based dynamics from reduced stochastic rule-based models. WSC 2012: 225:1-225:15 - 2011
- [c6]Tatjana Petrov, Arnab Ganguly, Heinz Koeppl:
Model Decomposition and Stochastic Fragments. SASB 2011: 105-124 - 2010
- [c5]Heinz Koeppl, Gianluca Setti, Serge Pelet, Mauro Mangia, Tatjana Petrov, Matthias Peter:
Probability metrics to calibrate stochastic chemical kinetics. ISCAS 2010: 541-544 - [c4]Jérôme Feret, Thomas A. Henzinger, Heinz Koeppl, Tatjana Petrov:
Lumpability Abstractions of Rule-based Systems. MeCBIC 2010: 142-161 - [c3]Heinz Koeppl, Tatjana Petrov:
Stochastic Semantics of Signaling as a Composition of Agent-view Automata. SASB 2010: 3-17 - [c2]Ferdinanda Camporesi, Jérôme Feret, Heinz Koeppl, Tatjana Petrov:
Combining Model Reductions. MFPS 2010: 73-96
2000 – 2009
- 2008
- [c1]Laurent Doyen, Thomas A. Henzinger, Barbara Jobstmann, Tatjana Petrov:
Interface theories with component reuse. EMSOFT 2008: 79-88
Coauthor Index
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