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ORCIDBjoern H. Menze
Bjoern Holger Menze – Björn H. Menze
Person information
- affiliation: TU Munich, Faculty of Computer Science
- affiliation: ETH Zurich, Computer Vision Laboratory
- affiliation: Massachusetts Institute of Technology (MIT), Computer Science and Artificial Intelligence Laboratory
- affiliation: Harvard University, Department of Anthropology
- affiliation: University of Heidelberg, Interdisciplinary Center for Computing (IWR)
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2020 – today
- 2022
[j35]Matthias Ivantsits, Leonid Goubergrits, Jan-Martin Kuhnigk, Markus Hüllebrand, Jan Brüning, Tabea Kossen, Boris Pfahringer, Jens Schaller, Andreas Spuler, Titus Kühne, Yizhuan Jia, Xuesong Li, Suprosanna Shit, Bjoern H. Menze, Ziyu Su, Jun Ma, Ziwei Nie, Kartik Jain, Yanfei Liu, Yi Lin, Anja Hennemuth
:
Detection and analysis of cerebral aneurysms based on X-ray rotational angiography - the CADA 2020 challenge. Medical Image Anal. 77: 102333 (2022)- [j34]Carolin M. Pirkl, Matteo Cencini, Jan W. Kurzawski, Diana Waldmannstetter, Hongwei Li, Anjany Sekuboyina, Sebastian Endt, Luca Peretti, Graziella Donatelli, Rosa Pasquariello, Mauro Costagli, Guido Buonincontri, Michela Tosetti, Marion I. Menzel, Bjoern H. Menze:
Learning residual motion correction for fast and robust 3D multiparametric MRI. Medical Image Anal. 77: 102387 (2022) - [j33]Ivan Ezhov, Tudor Mot, Suprosanna Shit, Jana Lipková, Johannes C. Paetzold, Florian Kofler, Chantal Pellegrini, Marcel Kollovieh, Fernando Navarro, Hongwei Li, Marie Metz, Benedikt Wiestler, Bjoern H. Menze:
Geometry-Aware Neural Solver for Fast Bayesian Calibration of Brain Tumor Models. IEEE Trans. Medical Imaging 41(5): 1269-1278 (2022) - [c112]Izabela Horvath, Johannes C. Paetzold, Oliver Schoppe, Rami Al-Maskari, Ivan Ezhov, Suprosanna Shit, Hongwei Li, Ali Ertürk, Bjoern H. Menze:
METGAN: Generative Tumour Inpainting and Modality Synthesis in Light Sheet Microscopy. WACV 2022: 3230-3240 - [i78]Fernando Navarro, Guido Sasahara, Suprosanna Shit, Ivan Ezhov, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
A unified 3D framework for Organs at Risk Localization and Segmentation for Radiation Therapy Planning. CoRR abs/2203.00624 (2022) - [i77]Suprosanna Shit, Rajat Koner, Bastian Wittmann, Johannes C. Paetzold, Ivan Ezhov, Hongwei Li, Jiazhen Pan, Sahand Sharifzadeh, Georgios Kaissis, Volker Tresp, Bjoern H. Menze:
Relationformer: A Unified Framework for Image-to-Graph Generation. CoRR abs/2203.10202 (2022) - [i76]Sandeep Kaushik, Mikael Bylund, Cristina Cozzini, Dattesh Shanbhag, Steven F. Petit, Jonathan J. Wyatt, Marion I. Menzel, Carolin M. Pirkl, Bhairav Mehta, Vikas Chauhan, Kesavadas Chandrasekharan, Joakim Jonsson, Tufve Nyholm, Florian Wiesinger, Bjoern H. Menze:
Region of Interest focused MRI to Synthetic CT Translation using Regression and Classification Multi-task Network. CoRR abs/2203.16288 (2022) - [i75]Lucas Fidon, Michael Aertsen, Florian Kofler, Andrea Bink, Anna L. David, Thomas Deprest, Doaa Emam, Frédéric Guffens, András Jakab, Gregor Kasprian, Patric Kienast, Andrew Melbourne, Bjoern H. Menze, Nada Mufti, Ivana Pogledic, Daniela Prayer, Marlene Stuempflen, Esther Van Elslander, Sébastien Ourselin, Jan Deprest, Tom Vercauteren:
A Dempster-Shafer approach to trustworthy AI with application to fetal brain MRI segmentation. CoRR abs/2204.02779 (2022) - [i74]Kelly Payette, Hongwei Li, Priscille de Dumast, Roxane Licandro, Hui Ji, Md Mahfuzur Rahman Siddiquee, Daguang Xu, Andriy Myronenko, Hao Liu, Yuchen Pei, Lisheng Wang, Ying Peng, Juanying Xie, Huiquan Zhang, Guiming Dong, Hao Fu, Guotai Wang, ZunHyan Rieu, Donghyeon Kim, Hyun Gi Kim, Davood Karimi, Ali Gholipour, Helena R. Torres, Bruno Oliveira, João L. Vilaça, Yang Lin, Netanell Avisdris, Ori Ben-Zvi, Dafna Ben-Bashat, Lucas Fidon, Michael Aertsen, Tom Vercauteren, Daniel Sobotka, Georg Langs, Mireia Alenyà, Maria Inmaculada Villanueva, Oscar Camara, Bella Fadida-Specktor, Leo Joskowicz, Weibin Liao, Lv Yi, Xuesong Li, Moona Mazher, Abdul Qayyum, Domenec Puig, Hamza Kebiri, Zelin Zhang, Xinyi Xu, Dan Wu, KuanLun Liao, YiXuan Wu, JinTai Chen, Yunzhi Xu, Li Zhao, Lana Vasung, Bjoern H. Menze, Meritxell Bach Cuadra, András Jakab:
Fetal Brain Tissue Annotation and Segmentation Challenge Results. CoRR abs/2204.09573 (2022) - [i73]Ivan Ezhov, Marcel Rosier, Lucas Zimmer, Florian Kofler, Suprosanna Shit, Johannes C. Paetzold, Kevin Scibilia, Leon Mächler, Katharina Franitza, Tamaz Amiranashvili, Marie Metz, Sailesh Conjeti, Benedikt Wiestler, Bjoern H. Menze:
Casting the inverse problem as a database query. The case of personalized tumor growth modeling. CoRR abs/2205.04550 (2022) - 2021
- [j32]Bjoern H. Menze, Fabian Isensee, Roland Wiest, Benedikt Wiestler, Klaus H. Maier-Hein, Mauricio Reyes, Spyridon Bakas:
Analyzing magnetic resonance imaging data from glioma patients using deep learning. Comput. Medical Imaging Graph. 88: 101828 (2021) - [j31]Mohammad Golbabaee, Guido Buonincontri, Carolin M. Pirkl, Marion I. Menzel, Bjoern H. Menze, Mike E. Davies, Pedro A. Gómez:
Compressive MRI quantification using convex spatiotemporal priors and deep encoder-decoder networks. Medical Image Anal. 69: 101945 (2021) - [j30]Anjany Sekuboyina, Malek El Husseini, Amirhossein Bayat, Maximilian Löffler, Hans Liebl, Hongwei Li, Giles Tetteh, Jan Kukacka, Christian Payer, Darko Stern, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Tamaz Amiranashvili, Moritz Ehlke, Hans Lamecker, Sebastian Lehnert, Marilia Lirio, Nicolás Pérez de Olaguer, Heiko Ramm, Manish Sahu, Alexander Tack, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Kevin Brown, Alexandre Kirszenberg, Élodie Puybareau, Di Chen, Yiwei Bai, Brandon H. Rapazzo, Timyoas Yeah, Amber Zhang, Shangliang Xu, Feng Hou, Zhiqiang He, Chan Zeng, Zheng Xiangshang, Xu Liming, Tucker J. Netherton, Raymond P. Mumme, Laurence E. Court, Zixun Huang, Chenhang He, Li-Wen Wang, Sai Ho Ling, Lê Duy Huynh, Nicolas Boutry, Roman Jakubícek, Jirí Chmelík, Supriti Mulay, Mohanasankar Sivaprakasam, Johannes C. Paetzold, Suprosanna Shit, Ivan Ezhov, Benedikt Wiestler, Ben Glocker, Alexander Valentinitsch, Markus Rempfler, Björn H. Menze, Jan S. Kirschke:
VerSe: A Vertebrae labelling and segmentation benchmark for multi-detector CT images. Medical Image Anal. 73: 102166 (2021) - [j29]Ezequiel de la Rosa, Diana Maria Sima, Bjoern H. Menze, Jan S. Kirschke, David Robben:
AIFNet: Automatic vascular function estimation for perfusion analysis using deep learning. Medical Image Anal. 74: 102211 (2021) - [j28]Kimberley M. Timmins, Irene C. van der Schaaf, Edwin Bennink, Ynte M. Ruigrok, Xingle An, Michael Baumgartner, Pascal Bourdon, Riccardo de Feo, Tommaso Di Noto, Florian Dubost, Augusto Fava-Sanches, Xue Feng, Corentin Giroud, Inteneural Group, Minghui Hu, Paul F. Jaeger, Juhana Kaiponen, Michal Klimont, Yuexiang Li, Hongwei Li, Yi Lin, Timo Loehr, Jun Ma, Klaus H. Maier-Hein, Guillaume Marie, Bjoern H. Menze, Jonas Richiardi, Saifeddine Rjiba, Dhaval Shah, Suprosanna Shit, Jussi Tohka, Thierry Urruty, Urszula Walinska, Xiaoping Yang, Yunqiao Yang, Yin Yin, Birgitta K. Velthuis, Hugo J. Kuijf:
Comparing methods of detecting and segmenting unruptured intracranial aneurysms on TOF-MRAS: The ADAM challenge. NeuroImage 238: 118216 (2021) - [j27]Jianning Li, Pedro Pimentel, Angelika Szengel, Moritz Ehlke, Hans Lamecker, Stefan Zachow, Laura Jovani Estacio Cerquin, Christian Doenitz, Heiko Ramm, Haochen Shi, Xiaojun Chen, Franco Matzkin, Virginia F. J. Newcombe, Enzo Ferrante, Yuan Jin, David G. Ellis, Michele R. Aizenberg, Oldrich Kodym, Michal Spanel, Adam Herout, James G. Mainprize, Zachary Fishman, Michael R. Hardisty, Amirhossein Bayat, Suprosanna Shit, Bomin Wang, Zhi Liu, Matthias Eder, Antonio Pepe, Christina Gsaxner, Victor Alves, Ulrike Zefferer, Gord von Campe, Karin Pistracher, Ute Schäfer, Dieter Schmalstieg, Bjoern H. Menze, Ben Glocker, Jan Egger:
AutoImplant 2020-First MICCAI Challenge on Automatic Cranial Implant Design. IEEE Trans. Medical Imaging 40(9): 2329-2342 (2021) - [j26]Víctor M. Campello, Polyxeni Gkontra, Cristian Izquierdo, Carlos Martín-Isla, Alireza Sojoudi, Peter M. Full, Klaus H. Maier-Hein, Yao Zhang, Zhiqiang He, Jun Ma, Mario Parreño, Alberto Albiol, Fanwei Kong, Shawn C. Shadden, Jorge Corral Acero, Vaanathi Sundaresan, Mina Saber, Mustafa A. Alattar, Hongwei Li, Bjoern H. Menze, Firas Khader, Christoph Haarburger, Cian M. Scannell, Mitko Veta, Adam Carscadden, Kumaradevan Punithakumar, Xiao Liu, Sotirios A. Tsaftaris, Xiaoqiong Huang, Xin Yang, Lei Li, Xiahai Zhuang, David Viladés, Martín Luís Descalzo, Andrea Guala, Lucia La Mura, Matthias G. Friedrich, Ria Garg, Julie Lebel, Filipe Henriques, Mahir Karakas, Ersin Çavus, Steffen E. Petersen, Sergio Escalera, Santi Seguí, José F. Rodríguez Palomares, Karim Lekadir:
Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation: The M&Ms Challenge. IEEE Trans. Medical Imaging 40(12): 3543-3554 (2021) - [c111]Suprosanna Shit, Johannes C. Paetzold, Anjany Sekuboyina, Ivan Ezhov, Alexander Unger, Andrey Zhylka, Josien P. W. Pluim, Ulrich Bauer, Bjoern H. Menze:
clDice - A Novel Topology-Preserving Loss Function for Tubular Structure Segmentation. CVPR 2021: 16560-16569 - [c110]Xiaobin Hu, Wenqi Ren, Kaicheng Yu, Kaihao Zhang, Xiaochun Cao, Wei Liu, Bjoern H. Menze:
Pyramid Architecture Search for Real-Time Image Deblurring. ICCV 2021: 4278-4287 - [c109]Suprosanna Shit, Dhritiman Das, Ivan Ezhov, Johannes C. Paetzold, Augusto F. Sanches, Nils Thuerey, Bjoern H. Menze:
Velocity-To-Pressure (V2P) - Net: Inferring Relative Pressures from Time-Varying 3D Fluid Flow Velocities. IPMI 2021: 545-558 - [c108]Hongwei Li, Rameshwara G. N. Prasad, Anjany Sekuboyina, Chen Niu, Siwei Bai, Werner Hemmert, Bjoern H. Menze:
Micro-Ct Synthesis and Inner Ear Super Resolution via Generative Adversarial Networks and Bayesian Inference. ISBI 2021: 1500-1504 - [c107]Hongwei Li, Fei-Fei Xue, Krishna Chaitanya, Shengda Luo, Ivan Ezhov, Benedikt Wiestler, Jianguo Zhang, Bjoern H. Menze:
Imbalance-Aware Self-supervised Learning for 3D Radiomic Representations. MICCAI (2) 2021: 36-46 - [c106]Hongwei Li, Sunita Gopal, Anjany Sekuboyina, Jianguo Zhang, Chen Niu, Carolin M. Pirkl, Jan Kirschke, Benedikt Wiestler, Bjoern H. Menze:
Unpaired MR Image Homogenisation by Disentangled Representations and Its Uncertainty. UNSURE/PIPPI@MICCAI 2021: 44-53 - [c105]Xiaobin Hu, Yanyang Yan, Wenqi Ren, Hongwei Li, Amirhossein Bayat, Yu Zhao, Bjoern H. Menze:
Feedback Graph Attention Convolutional Network for MR Images Enhancement by Exploring Self-Similarity Features. MIDL 2021: 327-337 - [c104]Carolin M. Pirkl, Matteo Cencini, Jan W. Kurzawski, Diana Waldmannstetter, Hongwei Li, Anjany Sekuboyina, Sebastian Endt, Luca Peretti, Graziella Donatelli, Rosa Pasquariello, Michela Tosetti, Mauro Costagli, Guido Buonincontri, Marion I. Menzel, Bjoern H. Menze:
Residual learning for 3D motion corrected quantitative MRI: Robust clinical T1, T2 and proton density mapping. MIDL 2021: 618-632 - [c103]Johannes C. Paetzold, Julian McGinnis, Suprosanna Shit, Ivan Ezhov, Paul Büschl, Chinmay Prabhakar, Anjany Sekuboyina, Mihail I. Todorov, Georgios Kaissis, Ali Ertürk, Stephan Günnemann, Bjoern H. Menze:
Whole Brain Vessel Graphs: A Dataset and Benchmark for Graph Learning and Neuroscience. NeurIPS Datasets and Benchmarks 2021 - [i72]Sarthak Pati, Siddhesh P. Thakur, Megh Bhalerao, Ujjwal Baid, Caleb M. Grenko, Brandon Edwards, Micah J. Sheller, Jose Agraz, Bhakti Baheti, Vishnu Bashyam, Parth Sharma, Babak Haghighi, Aimilia Gastounioti, Mark Bergman, Bjoern H. Menze, Despina Kontos, Christos Davatzikos, Spyridon Bakas:
GaNDLF: A Generally Nuanced Deep Learning Framework for Scalable End-to-End Clinical Workflows in Medical Imaging. CoRR abs/2103.01006 (2021) - [i71]Hongwei Li, Fei-Fei Xue, Krishna Chaitanya, Shengda Liu, Ivan Ezhov, Benedikt Wiestler, Jianguo Zhang, Bjoern H. Menze:
Imbalance-Aware Self-Supervised Learning for 3D Radiomic Representations. CoRR abs/2103.04167 (2021) - [i70]Florian Kofler, Ivan Ezhov, Fabian Isensee, Fabian Balsiger, Christoph Berger, Maximilian Koerner, Johannes C. Paetzold, Hongwei Li, Suprosanna Shit, Richard McKinley, Spyridon Bakas, Claus Zimmer, Donna P. Ankerst, Jan Kirschke, Benedikt Wiestler, Bjoern H. Menze:
Are we using appropriate segmentation metrics? Identifying correlates of human expert perception for CNN training beyond rolling the DICE coefficient. CoRR abs/2103.06205 (2021) - [i69]Hans Liebl, David Schinz, Anjany Sekuboyina, Luca Malagutti, Maximilian T. Löffler, Amirhossein Bayat, Malek El Husseini, Giles Tetteh, Katharina Grau, Eva Niederreiter, Thomas Baum, Benedikt Wiestler, Bjoern H. Menze, Rickmer Braren, Claus Zimmer, Jan S. Kirschke:
A Computed Tomography Vertebral Segmentation Dataset with Anatomical Variations and Multi-Vendor Scanner Data. CoRR abs/2103.06360 (2021) - [i68]Ezequiel de la Rosa, David Robben, Diana Maria Sima, Jan S. Kirschke, Bjoern H. Menze:
Differentiable Deconvolution for Improved Stroke Perfusion Analysis. CoRR abs/2103.17111 (2021) - [i67]Annika Reinke, Matthias Eisenmann, Minu Dietlinde Tizabi, Carole H. Sudre, Tim Rädsch, Michela Antonelli, Tal Arbel, Spyridon Bakas, M. Jorge Cardoso, Veronika Cheplygina, Keyvan Farahani, Ben Glocker, Doreen Heckmann-Nötzel, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Jens Kleesiek, Tahsin M. Kurç, Michal Kozubek, Bennett A. Landman, Geert Litjens, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Jens Petersen, Mauricio Reyes, Nicola Rieke, Bram Stieltjes, Ronald M. Summers, Sotirios A. Tsaftaris, Bram van Ginneken, Annette Kopp-Schneider, Paul Jäger, Lena Maier-Hein:
Common Limitations of Image Processing Metrics: A Picture Story. CoRR abs/2104.05642 (2021) - [i66]Izabela Horvath, Johannes C. Paetzold, Oliver Schoppe, Rami Al-Maskari, Ivan Ezhov, Suprosanna Shit, Hongwei Li, Ali Ertuerk, Bjoern H. Menze:
METGAN: Generative Tumour Inpainting and Modality Synthesis in Light Sheet Microscopy. CoRR abs/2104.10993 (2021) - [i65]Sarthak Pati, Ujjwal Baid, Maximilian Zenk, Brandon Edwards, Micah J. Sheller, G. Anthony Reina, Patrick Foley, Alexey Gruzdev, Jason Martin, Shadi Albarqouni, Yong Chen, Russell Taki Shinohara, Annika Reinke, David Zimmerer, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Lena Maier-Hein, Jens Kleesiek, Bjoern H. Menze, Klaus H. Maier-Hein, Spyridon Bakas:
The Federated Tumor Segmentation (FeTS) Challenge. CoRR abs/2105.05874 (2021) - [i64]Fernando Navarro, Christopher Watanabe, Suprosanna Shit, Anjany Sekuboyina, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Evaluating the Robustness of Self-Supervised Learning in Medical Imaging. CoRR abs/2105.06986 (2021) - [i63]Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Stephan Heckers, Henkjan J. Huisman, William R. Jarnagin, Maureen McHugo, Sandy Napel, Jennifer Goli-Pernicka, Kawal S. Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, James A. Meakin, Sébastien Ourselin, Manuel Wiesenfarth, Pablo Arbelaez, Byeonguk Bae, Sihong Chen, Laura Alexandra Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, BeomHee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso:
The Medical Segmentation Decathlon. CoRR abs/2106.05735 (2021) - [i62]Ujjwal Baid, Satyam Ghodasara, Michel Bilello, Suyash Mohan, Evan Calabrese, Errol Colak, Keyvan Farahani, Jayashree Kalpathy-Cramer, Felipe C. Kitamura, Sarthak Pati, Luciano M. Prevedello, Jeffrey D. Rudie, Chiharu Sako, Russell T. Shinohara, Timothy Bergquist, Rong Chai, James Eddy, Julia Elliott, Walter Reade, Thomas Schaffter, Thomas Yu, Jiaxin Zheng, BraTS Annotators, Christos Davatzikos, John Mongan, Christopher Hess, Soonmee Cha, Javier E. Villanueva-Meyer, John B. Freymann, Justin S. Kirby, Benedikt Wiestler, Priscila Crivellaro, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Bjoern H. Menze, Adam E. Flanders, Spyridon Bakas:
The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classification. CoRR abs/2107.02314 (2021) - [i61]Johannes C. Paetzold, Julian McGinnis, Suprosanna Shit, Ivan Ezhov, Paul Büschl, Chinmay Prabhakar, Mihail I. Todorov, Anjany Sekuboyina, Georgios Kaissis, Ali Ertürk, Stephan Günnemann, Bjoern H. Menze:
Whole Brain Vessel Graphs: A Dataset and Benchmark for Graph Learning and Neuroscience (VesselGraph). CoRR abs/2108.13233 (2021) - [i60]Suprosanna Shit, Ivan Ezhov, Leon Mächler, Abinav R., Jana Lipková, Johannes C. Paetzold, Florian Kofler, Marie Piraud, Bjoern H. Menze:
Semi-Implicit Neural Solver for Time-dependent Partial Differential Equations. CoRR abs/2109.01467 (2021) - [i59]Giles Tetteh, Fernando Navarro, Johannes C. Paetzold, Jan Kirschke, Claus Zimmer, Bjoern H. Menze:
A Deep Learning Approach to Predicting Collateral Flow in Stroke Patients Using Radiomic Features from Perfusion Images. CoRR abs/2110.12508 (2021) - [i58]Ivan Ezhov, Kevin Scibilia, Katharina Franitza, Felix Steinbauer, Suprosanna Shit, Lucas Zimmer, Jana Lipková, Florian Kofler, Johannes C. Paetzold, Luca Canalini, Diana Waldmannstetter, Martin Menten, Marie Metz, Benedikt Wiestler, Bjoern H. Menze:
Learn-Morph-Infer: a new way of solving the inverse problem for brain tumor modeling. CoRR abs/2111.04090 (2021) - [i57]Leon Mächler, Ivan Ezhov, Florian Kofler, Suprosanna Shit, Johannes C. Paetzold, Timo Loehr, Benedikt Wiestler, Bjoern H. Menze:
FedCostWAvg: A new averaging for better Federated Learning. CoRR abs/2111.08649 (2021) - [i56]Bhakti Baheti, Diana Waldmannstetter, Satrajit Chakrabarty, Hamed Akbari, Michel Bilello, Benedikt Wiestler, Julian Schwarting, Evan Calabrese, Jeffrey D. Rudie, Syed Abidi, Mina Mousa, Javier E. Villanueva-Meyer, Daniel S. Marcus, Christos Davatzikos, Aristeidis Sotiras, Bjoern H. Menze, Spyridon Bakas:
The Brain Tumor Sequence Registration Challenge: Establishing Correspondence between Pre-Operative and Follow-up MRI scans of diffuse glioma patients. CoRR abs/2112.06979 (2021) - [i55]Raghav Mehta, Angelos Filos, Ujjwal Baid, Chiharu Sako, Richard McKinley, Michael Rebsamen, Katrin Dätwyler, Raphael Meier, Piotr Radojewski, Gowtham Krishnan Murugesan, Sahil S. Nalawade, Chandan Ganesh, Benjamin C. Wagner, Fang F. Yu, Baowei Fei, Ananth J. Madhuranthakam, Joseph A. Maldjian, Laura Alexandra Daza, Catalina Gómez, Pablo Arbeláez, Chengliang Dai, Shuo Wang, Hadrien Raynaud, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai, Subhashis Banerjee, Linmin Pei, Murat AK, Sarahi Rosas-González, Ilyess Zemmoura, Clovis Tauber, Minh H. Vu, Tufve Nyholm, Tommy Löfstedt, Laura Mora Ballestar, Verónica Vilaplana, Hugh McHugh, Gonzalo D. Maso Talou, Alan Wang, Jay B. Patel, Ken Chang, Katharina Hoebel, Mishka Gidwani, Nishanth Thumbavanam Arun, Sharut Gupta, Mehak Aggarwal, Praveer Singh, Elizabeth R. Gerstner, Jayashree Kalpathy-Cramer, Nicolas Boutry, Alexis Huard, Lasitha Vidyaratne, Md Monibor Rahman, Khan M. Iftekharuddin, Joseph Chazalon, Élodie Puybareau, Guillaume Tochon, Jun Ma, Mariano Cabezas, Xavier Lladó, Arnau Oliver, Liliana Valencia, Sergi Valverde, Mehdi Amian, Mohammadreza Soltaninejad, Andriy Myronenko, Ali Hatamizadeh, Xue Feng, Quan Dou, Nicholas J. Tustison, Craig Meyer, Nisarg A. Shah, Sanjay Talbar, Marc-André Weber, Abhishek Mahajan, András Jakab, Roland Wiest, Hassan M. Fathallah-Shaykh, Arash Nazeri, Mikhail Milchenko, Daniel S. Marcus, Aikaterini Kotrotsou, Rivka Colen, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Bjoern H. Menze, Spyridon Bakas, Yarin Gal, Tal Arbel:
QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Metrics and Benchmarking Results. CoRR abs/2112.10074 (2021) - 2020
- [j25]Xiaobin Hu, Rui Guo, Jieneng Chen, Hongwei Li, Diana Waldmannstetter, Yu Zhao, Biao Li, Kuangyu Shi, Bjoern H. Menze:
Coarse-to-Fine Adversarial Networks and Zone-Based Uncertainty Analysis for NK/T-Cell Lymphoma Segmentation in CT/PET Images. IEEE J. Biomed. Health Informatics 24(9): 2599-2608 (2020) - [c102]Yu Zhao, Fan Yang, Yuqi Fang, Hailing Liu, Niyun Zhou, Jun Zhang, Jiarui Sun, Sen Yang, Bjoern H. Menze, Xinjuan Fan, Jianhua Yao:
Predicting Lymph Node Metastasis Using Histopathological Images Based on Multiple Instance Learning With Deep Graph Convolution. CVPR 2020: 4836-4845 - [c101]Xiaobin Hu, Wenqi Ren, John LaMaster, Xiaochun Cao, Xiaoming Li, Zechao Li, Bjoern H. Menze, Wei Liu:
Face Super-Resolution Guided by 3D Facial Priors. ECCV (4) 2020: 763-780 - [c100]Jiechao Ma, Xiang Li, Hongwei Li, Ruixuan Wang, Bjoern H. Menze, Wei-Shi Zheng:
Cross-View Relation Networks for Mammogram Mass Detection. ICPR 2020: 8632-8638 - [c99]Hanwool Park, Amirhossein Bayat, Mohammad Sabokrou, Jan S. Kirschke, Bjoern H. Menze:
Robustification of Segmentation Models Against Adversarial Perturbations in Medical Imaging. PRIME@MICCAI 2020: 46-57 - [c98]Suprosanna Shit, Ivan Ezhov, Johannes C. Paetzold, Bjoern H. Menze:
Aν-Net: Automatic Detection and Segmentation of Aneurysm. CADA@MICCAI 2020: 51-57 - [c97]Maximilian Möller, Matthias Kohl, Stefan Braunewell, Florian Kofler, Benedikt Wiestler, Jan S. Kirschke, Björn H. Menze, Marie Piraud:
Reliable Saliency Maps for Weakly-Supervised Localization of Disease Patterns. iMIMIC/MIL3ID/LABELS@MICCAI 2020: 63-72 - [c96]Amirhossein Bayat, Suprosanna Shit, Adrian Kilian, Jürgen T. Liechtenstein, Jan S. Kirschke, Bjoern H. Menze:
Cranial Implant Prediction Using Low-Resolution 3D Shape Completion and High-Resolution 2D Refinement. AutoImplant@MICCAI 2020: 77-84 - [c95]Maximilian Hornung, Oliver Taubmann, Hendrik Ditt, Björn H. Menze, Pawel Andrzej Herman, Erik Fransén:
Detection of Ischemic Infarct Core in Non-contrast Computed Tomography. MLMI@MICCAI 2020: 260-269 - [c94]Hongwei Li, Jianguo Zhang, Bjoern H. Menze:
Generalisable Cardiac Structure Segmentation via Attentional and Stacked Image Adaptation. M&Ms and EMIDEC/STACOM@MICCAI 2020: 297-304 - [c93]Stefan Gerl, Johannes C. Paetzold, Hailong He, Ivan Ezhov, Suprosanna Shit, Florian Kofler, Amirhossein Bayat, Giles Tetteh, Vasilis Ntziachristos, Bjoern H. Menze:
A Distance-Based Loss for Smooth and Continuous Skin Layer Segmentation in Optoacoustic Images. MICCAI (6) 2020: 309-319 - [c92]Ezequiel de la Rosa, David Robben, Diana Maria Sima, Jan S. Kirschke, Bjoern H. Menze:
Differentiable Deconvolution for Improved Stroke Perfusion Analysis. MICCAI (7) 2020: 593-602 - [c91]Malek El Husseini, Anjany Sekuboyina, Maximilian Löffler, Fernando Navarro, Bjoern H. Menze, Jan S. Kirschke:
Grading Loss: A Fracture Grade-Based Metric Loss for Vertebral Fracture Detection. MICCAI (6) 2020: 733-742 - [c90]Amirhossein Bayat, Anjany Sekuboyina, Johannes C. Paetzold, Christian Payer, Darko Stern, Martin Urschler, Jan S. Kirschke, Bjoern H. Menze:
Inferring the 3D Standing Spine Posture from 2D Radiographs. MICCAI (6) 2020: 775-784 - [c89]Fernando Navarro, Anjany Sekuboyina, Diana Waldmannstetter, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Deep Reinforcement Learning for Organ Localization in CT. MIDL 2020: 544-554 - [c88]Carolin M. Pirkl, Pedro A. Gómez, Ilona Lipp, Guido Buonincontri, Miguel Molina-Romero, Anjany Sekuboyina, Diana Waldmannstetter, Jonathan Dannenberg, Sebastian Endt, Alberto Merola, Joseph R. Whittaker, Valentina Tomassini, Michela Tosetti, Derek K. Jones, Bjoern H. Menze, Marion I. Menzel:
Deep learning-based parameter mapping for joint relaxation and diffusion tensor MR Fingerprinting. MIDL 2020: 638-654 - [c87]Ahmad B. Qasim, Ivan Ezhov, Suprosanna Shit, Oliver Schoppe, Johannes C. Paetzold, Anjany Sekuboyina, Florian Kofler, Jana Lipková, Hongwei Li, Bjoern H. Menze:
Red-GAN: Attacking class imbalance via conditioned generation. Yet another medical imaging perspective. MIDL 2020: 655-668 - [c86]Diana Waldmannstetter, Fernando Navarro, Benedikt Wiestler, Jan S. Kirschke, Anjany Sekuboyina, Ester Molero, Bjoern H. Menze:
Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment. WBIR 2020: 81-90 - [i54]Mohammad Golbabaee, Guido Bounincontri, Carolin M. Pirkl, Marion I. Menzel, Bjoern H. Menze, Mike E. Davies, Pedro A. Gómez:
Compressive MRI quantification using convex spatiotemporal priors and deep auto-encoders. CoRR abs/2001.08746 (2020) - [i53]Anjany Sekuboyina, Amirhossein Bayat, Malek El Husseini, Maximilian Löffler, Markus Rempfler, Jan Kukacka, Giles Tetteh, Alexander Valentinitsch, Christian Payer, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Qingyue Wei, Kevin Brown, Matthias Wolf, Alexandre Kirszenberg, Élodie Puybareau, Björn H. Menze, Jan S. Kirschke:
VerSe: A Vertebrae Labelling and Segmentation Benchmark. CoRR abs/2001.09193 (2020) - [i52]Hongwei Li, Timo Loehr, Benedikt Wiestler, Jianguo Zhang, Bjoern H. Menze:
e-UDA: Efficient Unsupervised Domain Adaptation for Cross-Site Medical Image Segmentation. CoRR abs/2001.09313 (2020) - [i51]Suprosanna Shit, Johannes C. Paetzold, Anjany Sekuboyina, Andrey Zhylka, Ivan Ezhov, Alexander Unger, Josien P. W. Pluim, Giles Tetteh, Bjoern H. Menze:
clDice - a Topology-Preserving Loss Function for Tubular Structure Segmentation. CoRR abs/2003.07311 (2020) - [i50]Ahmad B. Qasim, Ivan Ezhov, Suprosanna Shit, Oliver Schoppe, Johannes C. Paetzold, Anjany Sekuboyina, Florian Kofler, Jana Lipková, Hongwei Li, Bjoern H. Menze:
Red-GAN: Attacking class imbalance via conditioned generation. Yet another medical imaging perspective. CoRR abs/2004.10734 (2020) - [i49]Fernando Navarro, Anjany Sekuboyina, Diana Waldmannstetter, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Deep Reinforcement Learning for Organ Localization in CT. CoRR abs/2005.04974 (2020) - [i48]Xiaobin Hu, Yanyang Yan, Wenqi Ren, Hongwei Li, Yu Zhao, Amirhossein Bayat, Bjoern H. Menze:
Feedback Graph Attention Convolutional Network for Medical Image Enhancement. CoRR abs/2006.13863 (2020) - [i47]Stefan Gerl, Johannes C. Paetzold, Hailong He, Ivan Ezhov, Suprosanna Shit, Florian Kofler, Amirhossein Bayat, Giles Tetteh, Vasilis Ntziachristos, Bjoern H. Menze:
A distance-based loss for smooth and continuous skin layer segmentation in optoacoustic images. CoRR abs/2007.05324 (2020) - [i46]Amirhossein Bayat, Anjany Sekuboyina, Johannes C. Paetzold, Christian Payer, Darko Stern, Martin Urschler, Jan S. Kirschke, Bjoern H. Menze:
Inferring the 3D Standing Spine Posture from 2D Radiographs. CoRR abs/2007.06612 (2020) - [i45]Xiaobin Hu, Wenqi Ren, John LaMaster, Xiaochun Cao, Xiaoming Li, Zechao Li, Bjoern H. Menze, Wei Liu:
Face Super-Resolution Guided by 3D Facial Priors. CoRR abs/2007.09454 (2020) - [i44]Hongwei Li, Jianguo Zhang, Bjoern H. Menze:
Generalisable Cardiac Structure Segmentation via Attentional and Stacked Image Adaptation. CoRR abs/2008.01216 (2020) - [i43]Hongwei Li, Aurore Menegaux, Felix J. B. Bäuerlein, Suprosanna Shit, Benita Schmitz-Koep, Christian Sorg, Bjoern H. Menze, Dennis M. Hedderich:
Complex Grey Matter Structure Segmentation in Brains via Deep Learning: Example of the Claustrum. CoRR abs/2008.03465 (2020) - [i42]Malek El Husseini, Anjany Sekuboyina, Maximilian Löffler, Fernando Navarro, Bjoern H. Menze, Jan S. Kirschke:
Grading Loss: A Fracture Grade-based Metric Loss for Vertebral Fracture Detection. CoRR abs/2008.07831 (2020) - [i41]Ivan Ezhov, Tudor Mot, Suprosanna Shit, Jana Lipková, Johannes C. Paetzold, Florian Kofler, Fernando Navarro, Marie Metz, Benedikt Wiestler, Björn H. Menze:
Real-time Bayesian personalization via a learnable brain tumor growth model. CoRR abs/2009.04240 (2020) - [i40]Amirhossein Bayat, Suprosanna Shit, Adrian Kilian, Jürgen T. Liechtenstein, Jan S. Kirschke, Bjoern H. Menze:
Cranial Implant Prediction using Low-Resolution 3D Shape Completion and High-Resolution 2D Refinement. CoRR abs/2009.10769 (2020) - [i39]Hanwool Park, Amirhossein Bayat, Mohammad Sabokrou, Jan S. Kirschke, Bjoern H. Menze:
Robustification of Segmentation Models Against Adversarial Perturbations In Medical Imaging. CoRR abs/2009.11090 (2020) - [i38]Ezequiel de la Rosa, Diana Maria Sima, Bjoern H. Menze, Jan S. Kirschke, David Robben:
AIFNet: Automatic Vascular Function Estimation for Perfusion Analysis Using Deep Learning. CoRR abs/2010.01617 (2020) - [i37]Hongwei Li, Rameshwara G. N. Prasad, Anjany Sekuboyina, Chen Niu, Siwei Bai, Werner Hemmert, Björn H. Menze:
Micro-CT Synthesis and Inner Ear Super Resolution via Bayesian Generative Adversarial Networks. CoRR abs/2010.14105 (2020) - [i36]Kelly Payette, Priscille de Dumast, Hamza Kebiri, Ivan Ezhov, Johannes C. Paetzold, Suprosanna Shit, Asim Iqbal, Romesa Khan, Raimund Kottke, Patrice Grehten, Hui Ji, Levente Lanczi, Marianna Nagy, Monika Beresova, Thi Dao Nguyen, Giancarlo Natalucci, Theofanis Karayannis, Bjoern H. Menze, Meritxell Bach Cuadra, András Jakab:
A comparison of automatic multi-tissue segmentation methods of the human fetal brain using the FeTA Dataset. CoRR abs/2010.15526 (2020)
2010 – 2019
- 2019
- [j24]Marie Piraud, Markus Wennmann, Laurent Kintzelé, Jens Hillengass, Ulrich Keller, Georg Langs, Marc-André Weber, Björn H. Menze:
Towards quantitative imaging biomarkers of tumor dissemination: A multi-scale parametric modeling of multiple myeloma. Medical Image Anal. 57: 214-225 (2019) - [j23]Yu Zhao, Hongwei Li, Shaohua Wan, Anjany Sekuboyina, Xiaobin Hu, Giles Tetteh, Marie Piraud, Bjoern H. Menze:
Knowledge-Aided Convolutional Neural Network for Small Organ Segmentation. IEEE J. Biomed. Health Informatics 23(4): 1363-1373 (2019) - [j22]Jana Lipková, Panagiotis Angelikopoulos, Stephen Wu, Esther Alberts, Benedikt Wiestler, Christian Diehl, Christine Preibisch, Thomas Pyka, Stephanie Combs, Panagiotis E. Hadjidoukas, Koen Van Leemput, Petros Koumoutsakos, John S. Lowengrub, Bjoern H. Menze:
Personalized Radiotherapy Design for Glioblastoma: Integrating Mathematical Tumor Models, Multimodal Scans, and Bayesian Inference. IEEE Trans. Medical Imaging 38(8): 1875-1884 (2019) - [c85]Florian Kofler, Johannes C. Paetzold, Ivan Ezhov, Suprosanna Shit, Daniel Krahulec, Jan S. Kirschke, Claus Zimmer, Benedikt Wiestler, Bjoern H. Menze:
A Baseline for Predicting Glioblastoma Patient Survival Time with Classical Statistical Models and Primitive Features Ignoring Image Information. BrainLes@MICCAI (1) 2019: 254-261 - [c84]Yu Zhao, Andrei Gafita, Giles Tetteh, Fabian Haupt, Ali Afshar-Oromieh, Bjoern H. Menze, Matthias Eiber, Axel Rominger, Kuangyu Shi:
Deep Neural Network for Automatic Characterization of Lesions on 68Ga-PSMA PET/CT Images. EMBC 2019: 951-954 - [c83]Hongwei Li, Maximilian Reichert, Kanru Lin, Nikita Tselousov, Rickmer Braren, Deliang Fu, Roland Schmid, Ji Li, Bjoern H. Menze, Kuangyu Shi:
Differential Diagnosis for Pancreatic Cysts in CT Scans Using Densely-Connected Convolutional Networks. EMBC 2019: 2095-2098 - [c82]Ezequiel de la Rosa, Diana Maria Sima, Thijs Vande Vyvere, Jan S. Kirschke, Björn H. Menze:
A Radiomics Approach to Traumatic Brain Injury Prediction in CT Scans. ISBI 2019: 732-735 - [c81]Yu Zhao, Yuan Liu, Yansheng Kan, Anjany Sekuboyina, Diana Waldmannstetter, Hongwei Li, Xiaobin Hu, Xiaozhi Zhao, Kuangyu Shi, Bjoern H. Menze:
Spatial-Frequency Non-local Convolutional LSTM Network for pRCC Classification. MICCAI (6) 2019: 22-30 - [c80]Malek El Husseini, Anjany Sekuboyina, Amirhossein Bayat, Bjoern H. Menze, Maximilian Löffler, Jan S. Kirschke:
Conditioned Variational Auto-encoder for Detecting Osteoporotic Vertebral Fractures. CSI@MICCAI 2019: 29-38 - [c79]Amirhossein Bayat, Anjany Sekuboyina, Felix Hofmann, Malek El Husseini, Jan S. Kirschke, Bjoern H. Menze:
Vertebral Labelling in Radiographs: Learning a Coordinate Corrector to Enforce Spinal Shape. CSI@MICCAI 2019: 39-46 - [c78]Jingkun Chen, Hongwei Li, Jianguo Zhang, Bjoern H. Menze:
Adversarial Convolutional Networks with Weak Domain-Transfer for Multi-sequence Cardiac MR Images Segmentation. STACOM@MICCAI 2019: 317-325 - [c77]Anjany Sekuboyina, Markus Rempfler, Alexander Valentinitsch, Maximilian Löffler, Jan S. Kirschke, Bjoern H. Menze:
Probabilistic Point Cloud Reconstructions for Vertebral Shape Analysis. MICCAI (6) 2019: 375-383 - [c76]Fernando Navarro, Suprosanna Shit, Ivan Ezhov, Johannes C. Paetzold, Andrei Gafita, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Shape-Aware Complementary-Task Learning for Multi-organ Segmentation. MLMI@MICCAI 2019: 620-627 - [c75]