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2020 – today
- 2021
[j35]Marco Antonio Tangaro
, Giuseppe Defazio, Bruno Fosso, Vito Flavio Licciulli, Giorgio Grillo, Giacinto Donvito, Enrico Lavezzo, Giacomo Baruzzo, Graziano Pesole, Monica Santamaria:
ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy. Bioinform. 37(22): 4253-4254 (2021)- 2020
- [j34]Simone Puccio, Giorgio Grillo, Arianna Consiglio, Maria Felicia Soluri, Daniele Sblattero, Diego Cotella, Claudio Santoro, Sabino Liuni, Gianluca De Bellis, Enrico Lugli, Clelia Peano, Flavio Licciulli:
InteractomeSeq: a web server for the identification and profiling of domains and epitopes from phage display and next generation sequencing data. Nucleic Acids Res. 48(Webserver-Issue): W200-W207 (2020)
2010 – 2019
- 2019
- [c2]Flavio Licciulli, G. De Robertis, A. Ranieri, Piet Verwilligen:
FATIC: an ASIC for Fast Timing Micro-Pattern Gas Detectors. IWASI 2019: 58-63 - 2018
- [j33]Vincenzo Bonnici, Giorgio De Caro, Giorgio Constantino, Sabino Liuni, Domenica D'Elia, Nicola Bombieri, Flavio Licciulli, Rosalba Giugno:
Arena-Idb: a platform to build human non-coding RNA interaction networks. BMC Bioinform. 19-S(10): 231-244 (2018) - [j32]Monica Santamaria, Bruno Fosso, Flavio Licciulli, Bachir Balech, Ilaria Larini, Giorgio Grillo, Giorgio De Caro, Sabino Liuni, Graziano Pesole:
ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences. Nucleic Acids Res. 46(Database-Issue): D127-D132 (2018) - 2017
- [j31]Simone Puccio, Giorgio Grillo, Flavio Licciulli, Marco Severgnini, Sabino Liuni, Silvio Bicciato, Gianluca De Bellis, Francesco Ferrari, Clelia Peano:
WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes. Nucleic Acids Res. 45(Webserver-Issue): W109-W115 (2017) - [c1]Flavio Licciulli, Paul Aspell, Mieczyslaw Dabrowski, Gilles De Lentdecker, Giuseppe De Robertis, Marek Idzik, Aamir Irshad, Flavio Loddo, Henri Petrow, J. Rosa, Tuure Tuuva:
Calibration, bias and monitoring system for the VFAT3 ASIC of the CMS GEM detector. IWASI 2017: 81-84 - 2012
- [j30]Monica Santamaria, Bruno Fosso, Arianna Consiglio, Giorgio De Caro, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marinella Marzano, Daniel Alonso-Alemany, Gabriel Valiente, Graziano Pesole:
Reference databases for taxonomic assignment in metagenomics. Briefings Bioinform. 13(6): 682-695 (2012) - [j29]Arianna Consiglio, Massimo Carella, Giorgio De Caro, Gianfranco Delle Foglie, Candida Giovannelli, Giorgio Grillo, Massimo Ianigro, Flavio Licciulli, Orazio Palumbo, Ada Piepoli, Elena Ranieri, Sabino Liuni:
BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments. BMC Bioinform. 13(S-4): S21 (2012) - [j28]Paolo Pannarale, Domenico Catalano, Giorgio De Caro, Giorgio Grillo, Pietro Leo, Graziano Pappadà, Francesco Rubino, Gaetano Scioscia, Flavio Licciulli:
GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity database. BMC Bioinform. 13(S-4): S4 (2012) - 2011
- [j27]Pier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole:
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. Nucleic Acids Res. 39(Database-Issue): 80-85 (2011) - 2010
- [j26]Giorgio Grillo, Antonio Turi, Flavio Licciulli, Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole:
UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 38(Database-Issue): 75-80 (2010)
2000 – 2009
- 2008
- [j25]Tiziana Castrignanò, Mattia D'Antonio, Anna Anselmo, Danilo Carrabino, A. D'Onorio De Meo, Anna Maria D'Erchia, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Alberto Riva, Raffaella Rizzi, Paola Bonizzoni, Graziano Pesole:
ASPicDB: A database resource for alternative splicing analysis. Bioinform. 24(10): 1300-1304 (2008) - 2007
- [j24]Elisabetta Sbisà, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Antonio Turi, Sabino Liuni, Graziano Pesole, Anna De Grassi, Mariano Francesco Caratozzolo, Anna Maria D'Erchia, Beatriz Navarro, Apollonia Tullo, Cecilia Saccone, Andreas Gisel:
p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining in silico prediction and microarray data. BMC Bioinform. 8(S-1) (2007) - [j23]Angelica Tulipano, Giacinto Donvito, Flavio Licciulli, Giorgio Pietro Maggi, Andreas Gisel:
Gene analogue finder: a GRID solution for finding functionally analogous gene products. BMC Bioinform. 8 (2007) - [j22]Paolo D'Onorio De Meo, Danilo Carrabino, Nico Sanna, Tiziana Castrignanò, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Matteo Re, Flavio Mignone, Graziano Pesole:
A high performance grid-web service framework for the identification of 'conserved sequence tags'. Future Gener. Comput. Syst. 23(3): 371-381 (2007) - 2006
- [j21]Domenico Catalano, Flavio Licciulli, Antonio Turi, Giorgio Grillo, Cecilia Saccone, Domenica D'Elia:
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa. BMC Bioinform. 7: 36 (2006) - 2005
- [j20]Flavio Mignone, Giorgio Grillo, Flavio Licciulli, Michele Iacono, Sabino Liuni, Paul J. Kersey, Jorge Duarte, Cecilia Saccone, Graziano Pesole:
UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 33(Database-Issue): 141-146 (2005) - 2004
- [j19]Andreas Gisel, Maria Panetta, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Cecilia Saccone, Graziano Pesole:
DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions. Bioinform. 20(18): 3676-3679 (2004) - 2003
- [j18]Marco Sardiello, Flavio Licciulli, Domenico Catalano, Marcella Attimonelli, Corrado Caggese:
MitoDrome: a database of Drosophila melanogaster nuclear genes encoding proteins targeted to the mitochondrion. Nucleic Acids Res. 31(1): 322-324 (2003) - [j17]Guglielmo Rainaldi, Mariateresa Volpicella, Flavio Licciulli, Sabino Liuni, Raffaele Gallerani, Luigi R. Ceci:
PLMItRNA, a database on the heterogeneous genetic origin of mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes. Nucleic Acids Res. 31(1): 436-438 (2003) - [j16]Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Graziano Pesole:
PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences. Nucleic Acids Res. 31(13): 3608-3612 (2003) - 2002
- [j15]Marcella Attimonelli, Domenico Catalano, Carmela Gissi, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Monica Santamaria, Graziano Pesole, Cecilia Saccone:
MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002. Nucleic Acids Res. 30(1): 172-173 (2002) - [j14]Cecilia Lanave, Flavio Licciulli, Mariateresa De Robertis, Alessandra Marolla, Marcella Attimonelli:
Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences. Nucleic Acids Res. 30(1): 174-175 (2002) - [j13]Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Flavio Mignone, Carmela Gissi, Cecilia Saccone:
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002. Nucleic Acids Res. 30(1): 335-340 (2002) - [j12]Francesca De Leo, Mariateresa Volpicella, Flavio Licciulli, Sabino Liuni, Raffaele Gallerani, Luigi R. Ceci:
PLANT-PIs: a database for plant protease inhibitors and their genes. Nucleic Acids Res. 30(1): 347-348 (2002) - 2001
- [j11]Fabrizio Damiano, Raffaele Gallerani, Sabino Liuni, Flavio Licciulli, Luigi R. Ceci:
PLMItRNA, a database for mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes. Nucleic Acids Res. 29(1): 167-168 (2001) - 2000
- [j10]Marcella Attimonelli, N. Altamura, R. Benne, A. Brennicke, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, Pawel Golik, Volker Knoop, Cecilia Lanave, Jaga Lazowska, Flavio Licciulli, B. S. Malladi, F. Memeo, M. Monnerot, R. Pasimeni, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Cecilia Saccone:
MitBASE : a comprehensive and integrated mitochondrial DNA database. The present status. Nucleic Acids Res. 28(1): 148-152 (2000) - [j9]Cecilia Lanave, Sabino Liuni, Flavio Licciulli, Marcella Attimonelli:
Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences. Nucleic Acids Res. 28(1): 153-154 (2000) - [j8]Vito Volpetti, Raffaele Gallerani, Caterina De Benedetto, Sabino Liuni, Flavio Licciulli, Luigi R. Ceci:
PLMItRNA, a database for tRNAs and tRNA genes in plant mitochondria: enlargement and updating. Nucleic Acids Res. 28(1): 159-162 (2000) - [j7]Graziano Pesole, Carmela Gissi, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marcella Attimonelli, Cecilia Saccone:
MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins. Nucleic Acids Res. 28(1): 163-165 (2000) - [j6]Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone:
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 28(1): 193-196 (2000) - [j5]Domenico Catalano, Flavio Licciulli, Domenica D'Elia, Marcella Attimonelli:
Update of KEYnet: a gene and protein names database for biosequences functional organisation. Nucleic Acids Res. 28(1): 372-373 (2000)
1990 – 1999
- 1999
- [j4]Cecilia Lanave, Marcella Attimonelli, Mariateresa De Robertis, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Cecilia Saccone:
Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences. Nucleic Acids Res. 27(1): 134-137 (1999) - [j3]Luigi R. Ceci, Mariateresa Volpicella, Sabino Liuni, Vito Volpetti, Flavio Licciulli, Raffaele Gallerani:
PLMItRNA, a database for higher plant mitochondrial tRNAs and tRNA genes. Nucleic Acids Res. 27(1): 156-157 (1999) - [j2]Flavio Licciulli, Domenico Catalano, Domenica D'Elia, V. Lorusso, Marcella Attimonelli:
KEYnet: a keywords database for biosequences functional organization. Nucleic Acids Res. 27(1): 365-367 (1999) - 1998
- [j1]Marcella Attimonelli, D. Calo, J. M. Cooper, A. de Montalvo, Flavio Licciulli, D. Sasanelli, K. Stevens, B. S. Malladi, Cecilia Saccone, Anthony H. V. Shapira:
The mitBASE human dataset structure. Nucleic Acids Res. 26(1): 116-119 (1998)
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