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ORCIDHisanori Kiryu
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2020 – today
- 2022
[j20]Yanting Zhang
, Hisanori Kiryu:
MODEC: an unsupervised clustering method integrating omics data for identifying cancer subtypes. Briefings Bioinform. 23(6) (2022)- 2020
- [j19]Yasuhiro Kojima, Hirotaka Matsumoto, Hisanori Kiryu:
Estimation of population genetic parameters using an EM algorithm and sequence data from experimental evolution populations. Bioinform. 36(1): 221-231 (2020)
2010 – 2019
- 2019
- [j18]Hisanori Kiryu, Yuto Ichikawa, Yasuhiro Kojima:
TMRS: an algorithm for computing the time to the most recent substitution event from a multiple alignment column. Algorithms Mol. Biol. 14(1): 23:1-23:14 (2019) - [j17]Risa Kawaguchi, Hisanori Kiryu, Junichi Iwakiri, Jun Sese:
reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction. BMC Bioinform. 20-S(3): 15-24 (2019) - 2017
- [j16]Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S. H. Ko, Shigeru B. H. Ko, Norio Gouda, Tetsutaro Hayashi, Itoshi Nikaido:
SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation. Bioinform. 33(15): 2314-2321 (2017) - 2016
- [j15]Risa Kawaguchi, Hisanori Kiryu:
Parallel computation of genome-scale RNA secondary structure to detect structural constraints on human genome. BMC Bioinform. 17: 203 (2016) - [j14]Hirotaka Matsumoto, Hisanori Kiryu:
SCOUP: a probabilistic model based on the Ornstein-Uhlenbeck process to analyze single-cell expression data during differentiation. BMC Bioinform. 17: 232 (2016) - [j13]Michiaki Hamada, Yukiteru Ono, Hisanori Kiryu, Kengo Sato, Yuki Kato, Tsukasa Fukunaga, Ryota Mori, Kiyoshi Asai:
Rtools: a web server for various secondary structural analyses on single RNA sequences. Nucleic Acids Res. 44(Webserver-Issue): W302-W307 (2016) - 2013
- [i1]Michiaki Hamada, Hisanori Kiryu, Wataru Iwasaki, Kiyoshi Asai:
Generalized Centroid Estimators in Bioinformatics. CoRR abs/1305.4339 (2013) - 2012
- [j12]Hisanori Kiryu, Kiyoshi Asai:
Rchange: algorithms for computing energy changes of RNA secondary structures in response to base mutations. Bioinform. 28(8): 1093-1101 (2012) - 2011
- [j11]Hisanori Kiryu, Goro Terai, Osamu Imamura, Hiroyuki Yoneyama, Kenji Suzuki, Kiyoshi Asai:
A detailed investigation of accessibilities around target sites of siRNAs and miRNAs. Bioinform. 27(13): 1788-1797 (2011) - [j10]Hisanori Kiryu:
Sufficient statistics and expectation maximization algorithms in phylogenetic tree models. Bioinform. 27(17): 2346-2353 (2011)
2000 – 2009
- 2009
- [j9]Michiaki Hamada, Hisanori Kiryu, Kengo Sato, Toutai Mituyama, Kiyoshi Asai:
Prediction of RNA secondary structure using generalized centroid estimators. Bioinform. 25(4): 465-473 (2009) - [j8]Michiaki Hamada, Kengo Sato, Hisanori Kiryu, Toutai Mituyama, Kiyoshi Asai:
Predictions of RNA secondary structure by combining homologous sequence information. Bioinform. 25(12) (2009) - [j7]Michiaki Hamada, Kengo Sato, Hisanori Kiryu, Toutai Mituyama, Kiyoshi Asai:
CentroidAlign: fast and accurate aligner for structured RNAs by maximizing expected sum-of-pairs score. Bioinform. 25(24): 3236-3243 (2009) - 2008
- [j6]Hisanori Kiryu, Taishin Kin, Kiyoshi Asai:
Rfold: an exact algorithm for computing local base pairing probabilities. Bioinform. 24(3): 367-373 (2008) - [j5]Yasuo Tabei, Hisanori Kiryu, Taishin Kin, Kiyoshi Asai:
A fast structural multiple alignment method for long RNA sequences. BMC Bioinform. 9 (2008) - [j4]Kiyoshi Asai, Hisanori Kiryu, Michiaki Hamada, Yasuo Tabei, Kengo Sato, Hiroshi Matsui, Yasubumi Sakakibara, Goro Terai, Toutai Mituyama:
Software.ncrna.org: web servers for analyses of RNA sequences. Nucleic Acids Res. 36(Web-Server-Issue): 75-78 (2008) - 2007
- [j3]Hisanori Kiryu, Taishin Kin, Kiyoshi Asai:
Robust prediction of consensus secondary structures using averaged base pairing probability matrices. Bioinform. 23(4): 434-441 (2007) - [j2]Hisanori Kiryu, Yasuo Tabei, Taishin Kin, Kiyoshi Asai:
Murlet: a practical multiple alignment tool for structural RNA sequences. Bioinform. 23(13): 1588-1598 (2007) - 2005
- [j1]Hisanori Kiryu, Taku Oshima, Kiyoshi Asai:
Extracting relations between promoter sequences and their strengths from microarray data. Bioinform. 21(7): 1062-1068 (2005)
Coauthor Index
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