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Stefan E. Seemann
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2020 – today
- 2021
- [j7]Blake A. Sweeney
, Anton I. Petrov, Carlos Eduardo Ribas, Robert D. Finn, Alex Bateman
, Maciej Szymanski, Wojciech M. Karlowski, Stefan E. Seemann, Jan Gorodkin, Jamie J. Cannone, Robin Ray Gutell
, Simon Kay, Steven J. Marygold, Gilberto dos Santos, Adam Frankish
, Jonathan M. Mudge
, Ruth Barshir, Simon Fishilevich, Patricia P. Chan, Todd M. Lowe, Ruth L. Seal, Elspeth A. Bruford
, Simona Panni, Pablo Porras
, Dimitra Karagkouni, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Pieter-Jan Volders, Pieter Mestdagh, Sam Griffiths-Jones, Bastian Fromm, Kevin J. Peterson, Ioanna Kalvari, Eric P. Nawrocki, Anton S. Petrov, Shuai Weng, Philia Bouchard-Bourelle, Michelle S. Scott, Lauren M. Lui, David Hoksza, Ruth C. Lovering, Barbara Kramarz, Prita Mani, Sridhar Ramachandran, Zasha Weinberg:
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. Nucleic Acids Res. 49(Database-Issue): D212-D220 (2021)
2010 – 2019
- 2017
- [j6]Milad Miladi
, Alexander Junge
, Fabrizio Costa, Stefan E. Seemann, Jakob Hull Havgaard, Jan Gorodkin
, Rolf Backofen:
RNAscClust: clustering RNA sequences using structure conservation and graph based motifs. Bioinform. 33(14): 2089-2096 (2017) - 2013
- [j5]Radhakrishnan Sabarinathan
, Hakim Tafer
, Stefan E. Seemann, Ivo L. Hofacker
, Peter F. Stadler
, Jan Gorodkin
:
The RNAsnp web server: predicting SNP effects on local RNA secondary structure. Nucleic Acids Res. 41(Webserver-Issue): 475-479 (2013) - 2012
- [j4]Peter Menzel
, Stefan E. Seemann, Jan Gorodkin
:
RILogo: visualizing RNA-RNA interactions. Bioinform. 28(19): 2523-2526 (2012) - 2011
- [j3]Stefan E. Seemann, Andreas S. Richter
, Tanja Gesell
, Rolf Backofen, Jan Gorodkin
:
PETcofold: predicting conserved interactions and structures of two multiple alignments of RNA sequences. Bioinform. 27(2): 211-219 (2011) - [j2]Stefan E. Seemann, Peter Menzel
, Rolf Backofen, Jan Gorodkin
:
The PETfold and PETcofold web servers for intra- and intermolecular structures of multiple RNA sequences. Nucleic Acids Res. 39(Web-Server-Issue): 107-111 (2011) - 2010
- [j1]Stefan E. Seemann, Andreas S. Richter
, Jan Gorodkin
, Rolf Backofen:
Hierarchical folding of multiple sequence alignments for the prediction of structures and RNA-RNA interactions. Algorithms Mol. Biol. 5: 22 (2010)
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