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ORCIDAngus Roberts
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- affiliation: University of Sheffield, England, UK
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2020 – today
- 2024
[j23]Gregory Kell, Angus Roberts, Serge Umansky, Linglong Qian, Davide Ferrari, Frank Soboczenski, Byron C. Wallace, Nikhil Patel, Iain James Marshall
:
Question answering systems for health professionals at the point of care - a systematic review. J. Am. Medical Informatics Assoc. 31(4): 1009-1024 (2024)- [c27]Agathe Zecevic, Xinyue Zhang, Sebastian Zeki, Angus Roberts:
Generation and Evaluation of Synthetic Endoscopy Free-Text Reports with Differential Privacy. BioNLP@ACL 2024: 14-24 - [i11]Gregory Kell, Angus Roberts, Serge Umansky, Linglong Qian, Davide Ferrari, Frank Soboczenski, Byron C. Wallace, Nikhil Patel, Iain James Marshall:
Question answering systems for health professionals at the point of care - a systematic review. CoRR abs/2402.01700 (2024) - [i10]Gregory Kell, Angus Roberts, Serge Umansky, Yuti Khare, Najma Ahmed, Nikhil Patel, Chloe Simela, Jack Coumbe, Julian Rozario, Ryan-Rhys Griffiths, Iain James Marshall:
RealMedQA: A pilot biomedical question answering dataset containing realistic clinical questions. CoRR abs/2408.08624 (2024) - 2023
- [j22]Helena Ariño, Soo Kyung Bae, Jaya Chaturvedi, Tao Wang, Angus Roberts:
Identifying encephalopathy in patients admitted to an intensive care unit: Going beyond structured information using natural language processing. Frontiers Digit. Health 5 (2023) - [j21]Diana Shamsutdinova, Jayati Das-Munshi, Mark Ashworth, Angus Roberts, Daniel Stahl:
Predicting type 2 diabetes prevalence for people with severe mental illness in a multi-ethnic East London population. Int. J. Medical Informatics 172: 105019 (2023) - [j20]Yamiko Joseph Msosa, Arturas Grauslys, Yifan Zhou, Tao Wang, Iain E. Buchan, Paul Langan, Steven Foster, Michael Walker, Michael Pearson, Amos Folarin, Angus Roberts, Simon Maskell, Richard J. B. Dobson, Cecil Kullu, Dennis Kehoe:
Trustworthy Data and AI Environments for Clinical Prediction: Application to Crisis-Risk in People With Depression. IEEE J. Biomed. Health Informatics 27(11): 5588-5598 (2023) - [c26]Leo Xinyue Zhang, Angus Roberts, Sebastian Zeki:
Joint Entity and Relation Extraction in Medical Text. KDH@IJCAI 2023 - [c25]Jaya Chaturvedi, Sumithra Velupillai, Robert Stewart, Angus Roberts:
Identifying Mentions of Pain in Mental Health Records Text: A Natural Language Processing Approach. MedInfo 2023: 695-699 - [i9]Jaya Chaturvedi, Sumithra Velupillai, Robert Stewart, Angus Roberts:
Identifying Mentions of Pain in Mental Health Records Text: A Natural Language Processing Approach. CoRR abs/2304.01240 (2023) - [i8]Jaya Chaturvedi, Tao Wang, Sumithra Velupillai, Robert Stewart, Angus Roberts:
Development of a Knowledge Graph Embeddings Model for Pain. CoRR abs/2308.08904 (2023) - [i7]Jaya Chaturvedi, Diana Shamsutdinova, Felix Zimmer, Sumithra Velupillai, Daniel Stahl, Robert Stewart, Angus Roberts:
Sample Size in Natural Language Processing within Healthcare Research. CoRR abs/2309.02237 (2023) - 2022
- [j19]Zahra Mahabadi, Maryam Mahabadi, Sumithra Velupillai, Angus Roberts, Philip K. McGuire, Zina M. Ibrahim, Rashmi Patel:
Evaluating physical urban features in several mental illnesses using electronic health record data. Frontiers Digit. Health 4 (2022) - [j18]Tao Wang, Rebecca Bendayan, Yamiko Msosa, Megan Pritchard, Angus Roberts, Robert Stewart, Richard J. B. Dobson:
Patient-centric characterization of multimorbidity trajectories in patients with severe mental illnesses: A temporal bipartite network modeling approach. J. Biomed. Informatics 127: 104010 (2022) - [j17]Dipen Patel, Yamiko Msosa, Tao Wang, Omar G. Mustafa, Siobhan Gee, Julie Williams, Angus Roberts, Richard J. B. Dobson, Fiona Gaughran:
An implementation framework and a feasibility evaluation of a clinical decision support system for diabetes management in secondary mental healthcare using CogStack. BMC Medical Informatics Decis. Mak. 22(1): 100 (2022) - [j16]Honghan Wu, Minhong Wang, Jinge Wu, Farah Francis, Yun-Hsuan Chang, Alex Shavick, Hang Dong, Michael Tin Chung Poon, Natalie K. Fitzpatrick, Adam P. Levine, Luke T. Slater, Alex Handy, Andreas Karwath, Georgios V. Gkoutos, Claude Chelala, Anoop D. Shah, Robert Stewart, Nigel Collier, Beatrice Alex, William Whiteley, Cathie Sudlow, Angus Roberts, Richard J. B. Dobson:
A survey on clinical natural language processing in the United Kingdom from 2007 to 2022. npj Digit. Medicine 5 (2022) - [c24]Diana Shamsutdinova, Daniel Stamate, Angus Roberts, Daniel Stahl:
Combining Cox Model and Tree-Based Algorithms to Boost Performance and Preserve Interpretability for Health Outcomes. AIAI (2) 2022: 170-181 - 2021
- [j15]Zeljko Kraljevic, Thomas Searle, Anthony Shek, Lukasz Roguski, Kawsar Noor, Daniel Bean, Aurelie Mascio, Leilei Zhu, Amos A. Folarin, Angus Roberts, Rebecca Bendayan, Mark P. Richardson, Robert Stewart, Anoop D. Shah, Wai Keong Wong, Zina M. Ibrahim, James T. Teo, Richard J. B. Dobson:
Multi-domain clinical natural language processing with MedCAT: The Medical Concept Annotation Toolkit. Artif. Intell. Medicine 117: 102083 (2021) - [j14]Aurelie Mascio, Robert Stewart, Riley Botelle, Marcus Williams, Luwaiza Mirza, Rashmi Patel, Thomas Pollak, Richard J. B. Dobson, Angus Roberts:
Cognitive Impairments in Schizophrenia: A Study in a Large Clinical Sample Using Natural Language Processing. Frontiers Digit. Health 3: 711941 (2021) - [j13]Jaya Chaturvedi, Aurelie Mascio, Sumithra Velupillai, Angus Roberts:
Development of a Lexicon for Pain. Frontiers Digit. Health 3: 778305 (2021) - 2020
- [j12]Julia Ive, Natalia Viani, Joyce Kam, Lucia Yin, Somain Verma, Stephen Puntis, Rudolf N. Cardinal, Angus Roberts, Robert Stewart, Sumithra Velupillai:
Generation and evaluation of artificial mental health records for Natural Language Processing. npj Digit. Medicine 3 (2020) - [c23]Aurelie Mascio, Zeljko Kraljevic, Daniel Bean, Richard J. B. Dobson, Robert Stewart, Rebecca Bendayan, Angus Roberts:
Comparative Analysis of Text Classification Approaches in Electronic Health Records. BioNLP 2020: 86-94 - [c22]Xingyi Song, Johnny Downs, Sumithra Velupillai, Rachel Holden, Maxim Kikoler, Kalina Bontcheva, Rina Dutta, Angus Roberts:
Using Deep Neural Networks with Intra- and Inter-Sentence Context to Classify Suicidal Behaviour. LREC 2020: 1303-1310 - [c21]Jaya Chaturvedi, Natalia Viani, Jyoti Sanyal, Chloe Tytherleigh, Idil Hasan, Kate Baird, Sumithra Velupillai, Robert Stewart, Angus Roberts:
Development of a Corpus Annotated with Medications and their Attributes in Psychiatric Health Records. LREC 2020: 2009-2016 - [i6]Rebecca Bendayan, Honghan Wu, Zeljko Kraljevic, Robert Stewart, Tom Searle, Jaya Chaturvedi, Jayati Das-Munshi, Zina M. Ibrahim, Aurelie Mascio, Angus Roberts, Daniel Bean, Richard J. B. Dobson:
Identifying physical health comorbidities in a cohort of individuals with severe mental illness: An application of SemEHR. CoRR abs/2002.08901 (2020) - [i5]Aurelie Mascio, Zeljko Kraljevic, Daniel Bean, Richard J. B. Dobson, Robert Stewart, Rebecca Bendayan, Angus Roberts:
Comparative Analysis of Text Classification Approaches in Electronic Health Records. CoRR abs/2005.06624 (2020) - [i4]Zeljko Kraljevic, Thomas Searle, Anthony Shek, Lukasz Roguski, Kawsar Noor, Daniel Bean, Aurelie Mascio, Leilei Zhu, Amos A. Folarin, Angus Roberts, Rebecca Bendayan, Mark P. Richardson, Robert Stewart, Anoop D. Shah, Wai Keong Wong, Zina M. Ibrahim, James T. Teo, Richard J. B. Dobson:
Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkit. CoRR abs/2010.01165 (2020)
2010 – 2019
- 2019
- [j11]Hegler Tissot, Marcos Didonet Del Fabro, Leon Derczynski, Angus Roberts:
Normalisation of imprecise temporal expressions extracted from text. Knowl. Inf. Syst. 61(3): 1361-1394 (2019) - [c20]André Bittar, Sumithra Velupillai, Angus Roberts, Rina Dutta:
Text Classification to Inform Suicide Risk Assessment in Electronic Health Records. MedInfo 2019: 40-44 - [i3]Zeljko Kraljevic, Daniel Bean, Aurelie Mascio, Lukasz Roguski, Amos Folarin, Angus Roberts, Rebecca Bendayan, Richard J. B. Dobson:
MedCAT - Medical Concept Annotation Tool. CoRR abs/1912.10166 (2019) - 2018
- [j10]Honghan Wu, Giulia Toti, Katherine I. Morley, Zina M. Ibrahim, Amos Folarin, Richard G. Jackson, Ismail Emre Kartoglu, Asha Agrawal, Clive Stringer, Darren Gale, Genevieve Gorrell, Angus Roberts, Matthew T. M. Broadbent, Robert Stewart, Richard J. B. Dobson:
SemEHR: A general-purpose semantic search system to surface semantic data from clinical notes for tailored care, trial recruitment, and clinical research. J. Am. Medical Informatics Assoc. 25(5): 530-537 (2018) - [j9]Sumithra Velupillai, Hanna Suominen, Maria Liakata, Angus Roberts, Anoop D. Shah, Katherine Morley, David Osborn, Joseph Hayes, Robert Stewart, Johnny Downs, Wendy W. Chapman, Rina Dutta:
Using clinical Natural Language Processing for health outcomes research: Overview and actionable suggestions for future advances. J. Biomed. Informatics 88: 11-19 (2018) - [j8]Richard G. Jackson, Ismail Emre Kartoglu, Clive Stringer, Genevieve Gorrell, Angus Roberts, Xingyi Song, Honghan Wu, Asha Agrawal, Kenneth Lui, Tudor Groza, Damian Lewsley, Doug Northwood, Amos Folarin, Robert Stewart, Richard J. B. Dobson:
CogStack - experiences of deploying integrated information retrieval and extraction services in a large National Health Service Foundation Trust hospital. BMC Medical Informatics Decis. Mak. 18(1): 47:1-47:13 (2018) - [c19]Xingyi Song, Johann Petrak, Angus Roberts:
A Deep Neural Network Sentence Level Classification Method with Context Information. EMNLP 2018: 900-904 - [i2]Xingyi Song, Johann Petrak, Angus Roberts:
A Deep Neural Network Sentence Level Classification Method with Context Information. CoRR abs/1809.00934 (2018) - [i1]Genevieve Gorrell, Xingyi Song, Angus Roberts:
Bio-YODIE: A Named Entity Linking System for Biomedical Text. CoRR abs/1811.04860 (2018) - 2016
- [c18]Genevieve Gorrell, Sherifat Oduola, Angus Roberts, Tom Craig, Craig Morgan, Robert Stewart:
Identifying First Episodes of Psychosis in Psychiatric Patient Records using Machine Learning. BioNLP@ACL 2016: 196-205 - 2015
- [c17]Hegler Tissot, Genevieve Gorrell, Angus Roberts, Leon Derczynski, Marcos Didonet Del Fabro:
UFPRSheffield: Contrasting Rule-based and Support Vector Machine Approaches to Time Expression Identification in Clinical TempEval. SemEval@NAACL-HLT 2015: 835-839 - 2013
- [j7]Kalina Bontcheva, Hamish Cunningham, Ian Roberts, Angus Roberts, Valentin Tablan, Niraj Aswani, Genevieve Gorrell:
GATE Teamware: a web-based, collaborative text annotation framework. Lang. Resour. Evaluation 47(4): 1007-1029 (2013) - [j6]Andrea C. Fernandes, Danielle Cloete, Matthew T. M. Broadbent, Richard D. Hayes, Chin-Kuo Chang, Richard G. Jackson, Angus Roberts, Jason Tsang, Murat Soncul, Jennifer Liebscher, Robert Stewart, Felicity Callard:
Development and evaluation of a de-identification procedure for a case register sourced from mental health electronic records. BMC Medical Informatics Decis. Mak. 13: 71 (2013) - [j5]Hamish Cunningham, Valentin Tablan, Angus Roberts, Kalina Bontcheva:
Getting More Out of Biomedical Documents with GATE's Full Lifecycle Open Source Text Analytics. PLoS Comput. Biol. 9(2) (2013) - [c16]Niraj Aswani, Thomas Beckers, Erich Birngruber, Célia Boyer, Andreas Burner, Jakub Bystron, Khalid Choukri, Sarah Cruchet, Hamish Cunningham, Jan Dedek, Ljiljana Dolamic, René Donner, Sebastian Dungs, Ivan Eggel, Antonio Foncubierta-Rodríguez, Norbert Fuhr, Adam Funk, Alba Garcia Seco de Herrera, Arnaud Gaudinat, Georgi Georgiev, Julien Gobeill, Lorraine Goeuriot, Paz Gomez, Robert Mark Greenwood, Manfred Gschwandtner, Allan Hanbury, Jan Hajic, Jaroslava Hlavácová, Markus Holzer, Gareth J. F. Jones, Blanca Jordan, Matthias Jordan, Klemens Kaderk, Franz Kainberger, Liadh Kelly, Sascha Kriewel, Marlene Kritz, Georg Langs, Nolan Lawson, Dimitrios Markonis, Iván Martínez, Vassil Momtchev, Alexandre Masselot, Hélène Mazo, Henning Müller, João R. M. Palotti, Pavel Pecina, Konstantin Pentchev, Deyan Peychev, Natalia Pletneva, Diana Pottecher, Angus Roberts, Patrick Ruch, Alexander Sachs, Matthias Samwald, Priscille Schneller, Veronika Stefanov, Miguel Angel Tinte, Zdenka Uresová, Alejandro Vargas, Dina Vishnyakova:
Khresmoi - Multilingual Semantic Search of Medical Text and Images. MedInfo 2013: 1266 - [c15]Genevieve Gorrell, Angus Roberts, Richard G. Jackson, Robert Stewart:
Finding Negative Symptoms of Schizophrenia in Patient Records. RANLP (Medicine and Biology) 2013: 9-17 - 2012
- [j4]Harsha Gurulingappa, Abdul Mateen Rajput, Angus Roberts, Juliane Fluck, Martin Hofmann-Apitius, Luca Toldo:
Development of a benchmark corpus to support the automatic extraction of drug-related adverse effects from medical case reports. J. Biomed. Informatics 45(5): 885-892 (2012)
2000 – 2009
- 2009
- [j3]Angus Roberts, Robert J. Gaizauskas, Mark Hepple, George Demetriou, Yikun Guo, Ian Roberts, Andrea Setzer:
Building a semantically annotated corpus of clinical texts. J. Biomed. Informatics 42(5): 950-966 (2009) - [c14]Georgi Georgiev, Kuzman Ganchev, Vassil Momtchev, Deyan Peychev, Preslav Nakov, Angus Roberts:
Tunable Domain-Independent Event Extraction in the MIRA Framework. BioNLP@HLT-NAACL (Shared Task) 2009: 95-98 - 2008
- [j2]Angus Roberts, Robert J. Gaizauskas, Mark Hepple, Yikun Guo:
Mining clinical relationships from patient narratives. BMC Bioinform. 9(S-11) (2008) - [c13]Angus Roberts, Robert J. Gaizauskas, Mark Hepple:
Extracting Clinical Relationships from Patient Narratives. BioNLP 2008: 10-18 - [c12]George Demetriou, Robert J. Gaizauskas, Haotian Sun, Angus Roberts:
ANNALIST - ANNotation ALIgnment and Scoring Tool. LREC 2008 - [c11]Angus Roberts, Robert J. Gaizauskas, Mark Hepple, Yikun Guo:
Combining Terminology Resources and Statistical Methods for Entity Recognition: an Evaluation. LREC 2008 - 2007
- [c10]Angus Roberts, Robert J. Gaizauskas, Mark Hepple, Neil Davis, George Demetriou, Yikun Guo, Jay (Subbarao) Kola, Ian Roberts, Andrea Setzer, Archana Tapuria, Bill Wheeldin:
The CLEF Corpus: Semantic Annotation of Clinical Text. AMIA 2007 - 2005
- [c9]Angus Roberts:
Learning Meronyms from Biomedical Text. ACL 2005: 49-54 - 2004
- [c8]Henk Harkema, Robert J. Gaizauskas, Mark Hepple, Neil Davis, Yikun Guo, Angus Roberts, Ian Roberts:
A Large-Scale Resource for Storing and Recognizing Technical Terminology. LREC 2004 - 2003
- [j1]Chris Wroe, Robert Stevens, Carole A. Goble, Angus Roberts, Robert Mark Greenwood:
A Suite of Daml+Oil Ontologies to Describe Bioinformatics Web Services and Data. Int. J. Cooperative Inf. Syst. 12(2): 197-224 (2003) - [c7]Luc Moreau, Simon Miles, Carole A. Goble, Robert Mark Greenwood, Vijay Dialani, Matthew Addis, Mahmut Nedim Alpdemir, Rich Cawley, David De Roure, Justin Ferris, Robert J. Gaizauskas, Kevin Glover, Chris Greenhalgh, Peter Li, Xiaojian Liu, Phillip W. Lord, Michael Luck, Darren Marvin, Thomas M. Oinn, Norman W. Paton, Steve Pettifer, Milena V. Radenkovic, Angus Roberts, Alan J. Robinson, Tom Rodden, Martin Senger, Nick Sharman, Robert Stevens, Brian Warboys, Anil Wipat, Chris Wroe:
On the Use of Agents in BioInformatics Grid. CCGRID 2003: 653-660 - 2002
- [c6]Alan L. Rector, Jeremy Rogers, Angus Roberts, Chris Wroe:
Scale and context: issues in ontologies to link health- and bio-informatics. AMIA 2002 - [c5]Liming Chen, Simon J. Cox, Carole A. Goble, Andy J. Keane, Angus Roberts, Nigel R. Shadbolt, Paul R. Smart, Feng Tao:
Engineering Knowledge for Engineering Grid Applications. EuroWeb 2002 - 2001
- [c4]Alan L. Rector, Chris Wroe, Jeremy Rogers, Angus Roberts:
Untangling taxonomies and relationships: personal and practical problems in loosely coupled development of large ontologies. K-CAP 2001: 139-146 - [c3]Jeremy Rogers, Angus Roberts, Danny Solomon, Egbert J. van der Haring, Christopher Wroe, Pieter E. Zanstra, Alan L. Rector:
GALEN Ten Years On: Tasks and Supporting Tools. MedInfo 2001: 256-260 - 2000
- [c2]Marcio Biczyk do Amaral, Angus Roberts, Alan L. Rector:
NLP techniques associated with the OpenGALEN ontology for semi-automatic textual extraction of medical knowledge: abstracting and mapping equivalent linguistic and logical constructs. AMIA 2000 - [c1]W. D. Solomon, Angus Roberts, Jeremy Rogers, Chris Wroe, Alan L. Rector:
Having our cake and eating it too: how the GALEN Intermediate Representation reconciles internal complexity with users' requirements for appropriateness and simplicity. AMIA 2000
Coauthor Index
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