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2010 – 2019
- 2018
[j7]Adithya Sagar, Rachel LeCover
, Christine Ann Shoemaker, Jeffrey D. Varner:
Dynamic Optimization with Particle Swarms (DOPS): a meta-heuristic for parameter estimation in biochemical models. BMC Syst. Biol. 12(1): 87:1-87:15 (2018)- [j6]Mengrou Shan, David Dai, Arunodai Vudem, Jeffrey D. Varner, Abraham Duncan Stroock:
Multi-scale computational study of the Warburg effect, reverse Warburg effect and glutamine addiction in solid tumors. PLoS Comput. Biol. 14(12) (2018) - 2017
- [j5]David M. Bassen, Michael Vilkhovoy, Mason Minot, Jonathan T. Butcher, Jeffrey D. Varner:
JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming language. BMC Syst. Biol. 11(1): 10:1-10:11 (2017) - 2016
- [j4]Russell Gould, David M. Bassen, Anirikh Chakrabarti, Jeffrey D. Varner, Jonathan T. Butcher:
Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1. PLoS Comput. Biol. 12(12) (2016) - 2011
- [j3]Joshua Lequieu, Anirikh Chakrabarti, Satyaprakash Nayak, Jeffrey D. Varner:
Computational Modeling and Analysis of Insulin Induced Eukaryotic Translation Initiation. PLoS Comput. Biol. 7(11) (2011)
2000 – 2009
- 2007
- [j2]Deyan Luan, Michael Zai, Jeffrey D. Varner:
Computationally Derived Points of Fragility of a Human Cascade Are Consistent with Current Therapeutic Strategies. PLoS Comput. Biol. 3(7) (2007) - 2005
- [j1]Anshuman Gupta, Jeffrey D. Varner, Costas D. Maranas:
Large-scale inference of the transcriptional regulation of Bacillus subtilis. Comput. Chem. Eng. 29(3): 565-576 (2005) - 2004
- [c1]Madhukar S. Dasika, Anshuman Gupta, Costas D. Maranas, Jeffrey D. Varner:
A Mixed Integer Linear Programming (MILP) Framework for Inferring Time Delay in Gene Regulatory Networks. Pacific Symposium on Biocomputing 2004: 474-485
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