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Martin J. Aryee

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2019
[j7]
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  - journals/bmcbi/KangeyanDISHGA19
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  - https://dblp.org/rec/journals/bmcbi/KangeyanDISHGA19
Divy Kangeyan, Andrew J. Dunford, Sowmya Iyer, Chip Stewart, Megan Hanna, Gad Getz, Martin J. Aryee:
A (fire)cloud-based DNA methylation data preprocessing and quality control platform. BMC Bioinform. 20(1): 160:1-160:5 (2019)
2018
[j6]
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  - journals/bioinformatics/LareauA18
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Caleb A. Lareau, Martin J. Aryee:
diffloop: a computational framework for identifying and analyzing differential DNA loops from sequencing data. Bioinform. 34(4): 672-674 (2018)
2014
[j5]
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  - journals/bioinformatics/AryeeJBLFHI14
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Martin J. Aryee, Andrew E. Jaffe, Héctor Corrada Bravo, Christine Ladd-Acosta, Andrew P. Feinberg, Kasper D. Hansen, Rafael A. Irizarry:
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays. Bioinform. 30(10): 1363-1369 (2014)
2013
[j4]
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  - journals/bmcsb/SimchaYAG13
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David M. Simcha, Laurent Younes, Martin J. Aryee, Donald Geman:
Identification of direction in gene networks from expression and methylation. BMC Syst. Biol. 7: 118 (2013)
2012
[j3]
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  - journals/bioinformatics/ChittendenHTMAGSBNQH12
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Thomas W. Chittenden, Eleanor Howe, Jennifer M. Taylor, Jessica Cara Mar, Martin J. Aryee, Harold Gómez, Razvan Sultana, John C. Braisted, Sarita J. Nair, John Quackenbush, Chris Holmes:
nEASE: a method for gene ontology subclassification of high-throughput gene expression data. Bioinform. 28(5): 726-728 (2012)
2010
[j2]
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  - journals/jcb/WuA10
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Zhijin Wu, Martin J. Aryee:
Subset Quantile Normalization Using Negative Control Features. J. Comput. Biol. 17(10): 1385-1395 (2010)
2009
[j1]
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  - journals/bmcbi/AryeeGKMQ09
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Martin J. Aryee, José A. Gutiérrez-Pabello, Igor Kramnik, Tapabrata Maiti, John Quackenbush:
An improved empirical bayes approach to estimating differential gene expression in microarray time-course data: BETR (Bayesian Estimation of Temporal Regulation). BMC Bioinform. 10: 409 (2009)

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