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ORCIDClaus O. Wilke
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2020 – today
- 2024
[j18]Mossa Merhi Reimert
, Josiah D. Parry, Matt Denwood, Maya Katrin Gussmann, Claus O. Wilke, Ilia Kosenkov, Michael Milton, Amy Thomason:
extendr: Frictionless bindings for R and Rust. J. Open Source Softw. 9(99): 6394 (2024)- 2023
- [j17]Clayton W. Kosonocky, Aaron L. Feller, Claus O. Wilke, Andrew D. Ellington:
Using alternative SMILES representations to identify novel functional analogues in chemical similarity vector searches. Patterns 4(12): 100865 (2023) - [i5]Clayton W. Kosonocky, Aaron L. Feller, Claus O. Wilke, Andrew D. Ellington:
Prompt Engineering for Transformer-based Chemical Similarity Search Identifies Structurally Distinct Functional Analogues. CoRR abs/2305.16330 (2023) - [i4]Clayton W. Kosonocky, Claus O. Wilke, Edward M. Marcotte, Andrew D. Ellington:
Mining Patents with Large Language Models Demonstrates Congruence of Functional Labels and Chemical Structures. CoRR abs/2309.08765 (2023) - 2021
- [j16]Alexis Hill, James Rybarski, Kuang Hu, Ilya Finkelstein, Claus O. Wilke:
Opfi: A Python package for identifying gene clusters in large genomics and metagenomics data sets. J. Open Source Softw. 6(66): 3678 (2021) - 2020
- [j15]Achim Zeileis, Jason C. Fisher, Kurt Hornik, Ross Ihaka, Claire D. McWhite, Paul Murrell, Reto Stauffer, Claus O. Wilke:
colorspace: A Toolbox for Manipulating and Assessing Colors and Palettes. J. Stat. Softw. 96(1) (2020)
2010 – 2019
- 2019
- [j14]Benjamin R. Jack, Claus O. Wilke:
Pinetree: a step-wise gene expression simulator with codon-specific translation rates. Bioinform. 35(20): 4176-4178 (2019) - [j13]Adam J. Hockenberry, Claus O. Wilke:
Phylogenetic Weighting Does Little to Improve the Accuracy of Evolutionary Coupling Analyses. Entropy 21(10): 1000 (2019) - [j12]Hadley Wickham, Mara Averick, Jennifer Bryan, Winston Chang, Lucy D'Agostino McGowan, Romain François, Garrett Grolemund, Alex Hayes, Lionel Henry, Jim Hester, Max Kuhn, Thomas Lin Pedersen, Evan Miller, Stephan Bache, Kirill Müller, Jeroen Ooms, David Robinson, Dana Paige Seidel, Vitalie Spinu, Kohske Takahashi, Davis Vaughan, Claus O. Wilke, Kara H. Woo, Hiroaki Yutani:
Welcome to the Tidyverse. J. Open Source Softw. 4(43): 1686 (2019) - [i3]Achim Zeileis, Jason C. Fisher, Kurt Hornik, Ross Ihaka, Claire D. McWhite, Paul Murrell, Reto Stauffer, Claus O. Wilke:
colorspace: A Toolbox for Manipulating and Assessing Colors and Palettes. CoRR abs/1903.06490 (2019) - 2015
- [j11]John R. Houser, Craig Barnhart, Daniel R. Boutz, Sean M. Carroll, Aurko Dasgupta, Joshua K. Michener, Brittany D. Needham, Ophelia Papoulas, Viswanadham Sridhara, Dariya K. Sydykova, Christopher J. Marx, M. Stephen Trent, Jeffrey E. Barrick, Edward M. Marcotte, Claus O. Wilke:
Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation. PLoS Comput. Biol. 11(8) (2015) - 2012
- [j10]Claus O. Wilke:
Bringing Molecules Back into Molecular Evolution. PLoS Comput. Biol. 8(6) (2012) - [j9]Daifeng Wang, Mia K. Markey, Claus O. Wilke, Ari Arapostathis:
Eigen-Genomic System Dynamic-Pattern Analysis (ESDA): Modeling mRNA Degradation and Self-Regulation. IEEE ACM Trans. Comput. Biol. Bioinform. 9(2): 430-437 (2012) - [c4]Arthur W. Covert III, Jared Carlson-Stevermer, Dakota Z. Derrberry, Claus O. Wilke:
The role of deleterious mutations in the adaptation to a novel environment. ALIFE 2012 - [c3]Arthur W. Covert III, Jared Carlson-Stevermer, Dakota Z. Derrberry, Claus O. Wilke:
What does sex have to do with it: tracking the fate of deleterious mutations in sexual populations. ALIFE 2012 - 2010
- [j8]Wanjun Gu, Tong Zhou, Claus O. Wilke:
A Universal Trend of Reduced mRNA Stability near the Translation-Initiation Site in Prokaryotes and Eukaryotes. PLoS Comput. Biol. 6(2) (2010) - [j7]Eamon B. O'Dea, Thomas E. Keller, Claus O. Wilke:
Does Mutational Robustness Inhibit Extinction by Lethal Mutagenesis in Viral Populations? PLoS Comput. Biol. 6(6) (2010)
2000 – 2009
- 2004
- [j6]Christoph Adami, Claus O. Wilke:
Experiments in Digital Evolution (Editors' Introduction to the Special Issue). Artif. Life 10(2): 117-122 (2004) - [j5]Ye Li, Claus O. Wilke:
Digital Evolution in Time-Dependent Fitness Landscapes. Artif. Life 10(2): 123-134 (2004) - [j4]Tyler J. Johnson, Claus O. Wilke:
Evolution of Resource Competition between Mutually Dependent Digital Organisms. Artif. Life 10(2): 145-156 (2004) - [j3]Charles Ofria, Claus O. Wilke:
Avida: A Software Platform for Research in Computational Evolutionary Biology. Artif. Life 10(2): 191-229 (2004) - 2003
- [j2]Christel Kamp, Claus O. Wilke, Christoph Adami, Stefan Bornholdt:
Viral evolution under the pressure of an adaptive immune system: Optimal mutation rates for viral escape. Complex. 8(2): 28-33 (2003) - [c2]Claus O. Wilke:
Does the Red Queen Reign in the Kingdom of Digital Organisms? ECAL 2003: 405-414 - 2001
- [i2]Claus O. Wilke:
Adaptive evolution on neutral networks. CoRR physics/0101021 (2001) - 2000
- [j1]Claus O. Wilke:
Dynamische Fitnesslandschaften. Künstliche Intell. 14(1): 20-25 (2000)
1990 – 1999
- 1999
- [c1]Claus O. Wilke, Christopher Ronnewinkel, Thomas Martinetz:
Molecular Evolution in Time-Dependent Environments. ECAL 1999: 417-421 - [i1]Christopher Ronnewinkel, Claus O. Wilke, Thomas Martinetz:
Genetic Algorithms in Time-Dependent Environments. CoRR physics/9911006 (1999)
Coauthor Index
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