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ORCIDQi Liu 0024
Person information
- affiliation (since 2013): Vanderbilt University Medical Center, Department of Biostatistics, Nashville, TN, USA
- affiliation: Chinese Academy of Sciences, Shanghai Institutes for Biological Sciences, Bioinformation Center, Shanghai, China
- affiliation (PhD 2003): Shanghai Jiao Tong University, College of Life Science and Biotechnology, Shanghai, China
Other persons with the same name
- Qi Liu — disambiguation page
- Qi Liu 0001
![[0000-0002-8485-3582]](https://dblp.dagstuhl.de/img/orcid-mark.12x12.png "0000-0002-8485-3582")
— Nanjing University of Information Science and Technology, School of Software, Nanjing, China (and 3 more) - Qi Liu 0002 — Hubei University for Nationalities, Department of Mathematics, Enshi, China
- Qi Liu 0003 — University of Science and Technology of China, School of Artifical Intelligence and Data Science, State Key Laboratory of Cognitive Intelligence, Hefei, China (and 1 more)
- Qi Liu 0004 — Xi'an University of Science and Technology, School of Energy, China
- Qi Liu 0005 — South China University of Technology, School of Future Technology, Guangzhou, China (and 2 more)
- Qi Liu 0006 — Shanghai Jiao Tong University, School of Biomedical Engineering, China
- Qi Liu 0007 — Tsinghua University, State Key Laboratory of Automotive Safety and Energy / Department of Automotive Engineering, Beijing, China
- Qi Liu 0008 — Virginia Tech, Blacksburg, VA, USA
- Qi Liu 0009 — Carleton University, Department of Systems and Computer Engineering, Ottawa, ON, Canada
- Qi Liu 0010 — Fudan University, State Key Laboratory of ASIC and System, Frontier Institute of Chip and System, Shanghai, China (and 2 more)
- Qi Liu 0011 — China University of Petroleum, College of Mechanical and Electronic Engineering, Qingdao, China
- Qi Liu 0012 — Mount Sinai Hospital, New York, NY, USA (and 1 more)
- Qi Liu 0013 — Hangzhou Dianzi University, Smart City Research Center of Zhejiang Province, China (and 1 more)
- Qi Liu 0014 — Northeastern University, School of Information Science and Engineering, Shenyang, China
- Qi Liu 0015 — Zhengzhou University, School of Software Technology, China
- Qi Liu 0016 — Hainan University, State Key Laboratory of Marine Resource Utilization in South China Sea / School of Information and Communication Engineering, Haikou, China
- Qi Liu 0017 — Lehigh University, Bethlehem, PA, USA (and 1 more)
- Qi Liu 0018 — Shanghai Jiao Tong University, MoE Key Lab of Artificial Intelligence, Shanghai, China (and 1 more)
- Qi Liu 0019 — Tongji University, College of Life Science and Biotechnology, Shanghai, China
- Qi Liu 0020 — Beijing Institute of Technology, School of Mechanical Engineering, Beijing, China
- Qi Liu 0021 — Beijing Institute of Technology, School of Mathematics and Statistics, Beijing, China
- Qi Liu 0022 — University of Illinois at Urbana-Champaign, Department of Mathematics, Urbana, IL, USA
- Qi Liu 0023 — Karlsruhe Institute of Technology, Institute for Automation and Applied Informatics, Eggenstein-Leopoldshafen, Germany
- Qi Liu 0025 — China University of Geosciences, School of Economics and Management, Wuhan, China
- Qi Liu 0026 — Southeast University, School of Transportation, Nanjing, China
- Qi Liu 0027 — Harbin Institute of Technology, Department of Control Science and Engineering, Shenzhen, China
- Qi Liu 0028 — Sun Yat-Sen University, School of Mathematics, Guangzhou, China
- Qi Liu 0029 — Shandong University, School of Information Science and Engineering, Qingdao, China
- Qi Liu 0030 — Southeast University, School of Energy and Environment,, Nanjing, China
- Qi Liu 0031 — Southeast University, National Mobile Communications Research Laboratory, Nanjing, China
- Qi Liu 0032 — Harbin Institute of Technology, State Key Laboratory of Robotics and System, Harbin, China
- Qi Liu 0033 — Shenyang Agriculture University, College of the Land and the Environment, Shenyang, China (and 1 more)
- Qi Liu 0034 — Zhejiang Normal University, College of Mathematics and Computer Science, Jinhua, China
- Qi Liu 0035 — Huangshan University, School of Information Engineering, Huangshan, China (and 2 more)
- Qi Liu 0036 — Guangdong University of Technology, School of Information Engineering, Department of Electromechanical Engineering, Guangzhou, China
- Qi Liu 0037 — University of Chinese Academy of Sciences, College of Earth and Planetary Sciences, Beijing, China (and 1 more)
- Qi Liu 0038 — University of Science and Technology of China, School of Earth and Space Sciences, Hefei, China
- Qi Liu 0039 — Chinese Academy of Agricultural Sciences, Beijing, China
- Qi Liu 0040 — Beijing University of Civil Engineering and Architecture, School of Mechanical-Electronic and Vehicle Engineering, Beijing, China
- Qi Liu 0041 — University of Science and Technology Beijing, School of Computer and Communication Engineering, USTB-EEasyTech Joint Lab of Artificial Intelligence, Beijing, China
- Qi Liu 0042 — City University of Hong Kong, Department of Electrical Engineering, Laboratory for Computational Neuroscience, Hong Kong
- Qi Liu 0043 — New York University, Department of Civil and Urban Engineering, New York, NY, USA
- Qi Liu 0044 — State Grid Xuzhou Power Supply Company, Xuzhou, China (and 1 more)
- Qi Liu 0045 — Sichuan University, Business School, Chengdu, China
- Qi Liu 0046 — Sichuan University, School of Electrical Engineering and Information, Chengdu, China
- Qi Liu 0047 — Xi'an Jiaotong University, School of Management, Key Lab of the Ministry of Education for Process Control and Efficiency Engineering, Xi'an, China
- Qi Liu 0048 — Chinese Academy of Sciences, Beijing Institute of Genomics, Beijing, China
- Qi Liu 0049 — University of Hong Kong, Department of Computer Science, Hong Kong (and 2 more)
- Qi Liu 0050 — Tencent, WeChat Search Application Department, Shenzhen, China
- Qi Liu 0051 — Universitat Politècnica de Catalunya, Department of Mathematics, Barcelona, Spain
- Qi Liu 0052 — Unsupervised Inc., Boulder, CO, USA (and 2 more)
- Qi Liu 0053 — East China Jiaotong University, School of Information Engineering, Nanchang, China
- Qi Liu 0054 — Northwestern Polytechnical University, School of Electronics and Information, Xi'an, China (and 2 more)
- Qi Liu 0055 — National University of Singapore, NUS Business School, Singapore
- Qi Liu 0056 — Southeast University, School of Computer Science and Engineering, Nanjing, China (and 1 more)
- Qi Liu 0057 — Shanghai Jiao Tong University, Department of Automation, Shanghai, China
- Qi Liu 0058 — National University of Defense Technology, College of Electronic Science and Technology, Changsha, China
- Qi Liu 0059 — Hunan University, College of Electrical and Information Engineering, Changsha, China
- Qi Liu 0060 — Hohai University, College of Energy and Electrical Engineering, Nanjing, China
- Qi Liu 0061 — Sun Yat-sen University, Guangzhou, China
- Qi Liu 0062 — Tokyo Institute of Technology, Department of Systems and Control Engineering, Tokyo, Japan (and 1 more)
- Qi Liu 0063 — Woosuk University, Department of Education, Wanju, South Korea
- Qi Liu 0064 — University of Chinese Academy of Sciences, School of Artificial Intelligence, Beijing, China
- Qi Liu 0065 — Qilu University of Technology, Shandong Academy of Sciences, Shandong Computer Science Center (National Supercomputer Center in Jinan), Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Jinan, China
- Qi Liu 0066 — Wuhan University of Technology, School of Mechanical and Electronic Engineering, Wuhan, China
- Qi Liu 0067 — Beijing Institute of Technology, School of Computer Science and Technology, Beijing, China
- Qi Liu 0068 — Beijing Institute of Technology, School of Cyberspace Science and Technology, Beijing, China
- Qi Liu 0069 — University of Roehampton, Roehampton Business School, London, UK
- Qi Liu 0070 — Shandong University, Qingdao, China
- Qi Liu 0071 — Renmin University of China, Beijing, China
- Qi Liu 0072 — Xiamen University of Technology, School of Mechanical Engineering and Automotive Engineering, China
- Qi Liu 0073 — Beibu Gulf University, School of Machinery and Shipbuilding, China
- Qi Liu 0074 — PLA, No.92493 Troops of PLA, Unit 60, Huludao, China
- Qi Liu 0075 — Harbin Institute of Technology, School of Electrical Engineering and Automation, Harbin, China
- Qi Liu 0076 — South China University of Technology, School of Design, Guangzhou Higher Education Mega Centre, Guangzhou, China
- Qi Liu 0077 — City University of Hong Kong, Department of Physics, Hong Kong (and 1 more)
- Qi Liu 0078 — Guangdong University of Science and Technology, Finance & Economics School (FES), China
- Qi Liu 0079 — Hubei University of Technology, School of Computer Science, Wuhan, China
- Qi Liu 0080 — Peking University, Academy for Advanced Interdisciplinary Studies, Center for Quantitative Biology and Peking-Tsinghua Center for Life Sciences, Beijing, China
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Journal Articles
- 2024
[j29]Ruining Deng, Can Cui, Lucas W. Remedios, Shunxing Bao, R. Michael Womick, Sophie Chiron, Jia Li, Joseph T. Roland, Ken S. Lau, Qi Liu, Keith T. Wilson, Yaohong Wang, Lori A. Coburn, Bennett A. Landman, Yuankai Huo:
Cross-scale multi-instance learning for pathological image diagnosis. Medical Image Anal. 94: 103124 (2024)- [j28]Hua-Chang Chen, Jing Wang, Yu Shyr, Qi Liu:
FindAdapt: A python package for fast and accurate adapter detection in small RNA sequencing. PLoS Comput. Biol. 20(1) (2024) - 2022
- [j27]Shih-Kai Chu, Shilin Zhao, Yu Shyr, Qi Liu:
Comprehensive evaluation of noise reduction methods for single-cell RNA sequencing data. Briefings Bioinform. 23(2) (2022) - [j26]Coleman R. Harris, Eliot T. McKinley, Joseph T. Roland, Qi Liu, Martha J. Shrubsole, Ken S. Lau, Robert J. Coffey, Julia Wrobel, Simon N. Vandekar:
Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images. Bioinform. 38(6): 1700-1707 (2022) - [j25]Qi Liu, Chih-Yuan Hsu, Jia Li, Yu Shyr:
Dysregulated ligand-receptor interactions from single-cell transcriptomics. Bioinform. 38(12): 3216-3221 (2022) - 2019
- [j24]Qi Liu, Quanhu Sheng, Jie Ping, Marisol Adelina Ramirez, Ken S. Lau, Robert J. Coffey, Yu Shyr:
scRNABatchQC: multi-samples quality control for single cell RNA-seq data. Bioinform. 35(24): 5306-5308 (2019) - [j23]Jing Wang, Xizhen Dai, Lynne D. Berry, Joy D. Cogan, Qi Liu, Yu Shyr:
HACER: an atlas of human active enhancers to interpret regulatory variants. Nucleic Acids Res. 47(Database-Issue): D106-D112 (2019) - [j22]David J. Wooten, Sarah M. Groves, Darren R. Tyson, Qi Liu, Jing S. Lim, Réka Albert, Carlos F. Lopez, Julien Sage, Vito Quaranta:
Systems-level network modeling of Small Cell Lung Cancer subtypes identifies master regulators and destabilizers. PLoS Comput. Biol. 15(10) (2019) - 2017
- [j21]Hao Wang, Jiamao Luo, Chun Liu, Huilin Niu, Jing Wang, Qi Liu, Zhongming Zhao, Hua Xu, Yanqing Ding, Jingchun Sun, Qingling Zhang:
Investigating MicroRNA and transcription factor co-regulatory networks in colorectal cancer. BMC Bioinform. 18(1): 388 (2017) - [j20]Jingchun Sun, Qiang Wei, Yubo Zhou, Jingqi Wang, Qi Liu, Hua Xu:
A systematic analysis of FDA-approved anticancer drugs. BMC Syst. Biol. 11(S-5): 87:1-87:17 (2017) - 2016
- [j19]Xinyang Deng, Qi Liu, Yong Deng:
Matrix games with payoffs of belief structures. Appl. Math. Comput. 273: 868-879 (2016) - [j18]Xinyang Deng, Zhipeng Zhang, Yong Deng, Qi Liu, Shuhua Chang:
Self-adaptive win-stay-lose-shift reference selection mechanism promotes cooperation on a square lattice. Appl. Math. Comput. 284: 322-331 (2016) - [j17]Eric C. Rouchka, Julia H. Chariker, Benjamin J. Harrison, Juw Won Park, Xueyuan Cao, Stanley Pounds, Susana C. Raimondi, James R. Downing, Raul C. Ribeiro, Jeffrey Rubnitz, Jatinder Lamba, Bernie J. Daigle Jr., Deborah Burgess, Stephanie Gehrlich, John C. Carmen, Nicholas Johnson, Chandrakanth Emani, Kalpani De Silva, Michael P. Heaton, Theodore S. Kalbfleisch, Teeradache Viangteeravat, Rahul Mudunuri, Oluwaseun Ajayi, Fatih Sen, Eunice Y. Huang, Mohammad Mohebbi, Luaire Florian, Douglas J. Jackson, John F. Naber, Akm Sabbir, Sally R. Ellingson, Yuping Lu, Charles A. Phillips, Michael A. Langston, Rahul Kumar Sevakula, Raghuveer Thirukovalluru, Nishchal K. Verma, Yan Cui, Mohammed Sayed, Jing Wang, Qi Liu, Yu Shyr, Xiaofei Zhang, Naresh Prodduturi, Gavin R. Oliver, Diane Grill, Jie Na, Jeanette Eckel-Passow, Eric W. Klee, Michael M. Goodin, Mark L. Farman, Harrison Inocencio, Chanyong Jang, Jerzy W. Jaromczyk, Neil Moore, Kelly L. Sovacool, Leon Dent, Mike Izban, Sammed N. Mandape, Shruti S. Sakhare, Siddharth Pratap, Dana Marshall, M. Scotty Depriest, James N. MacLeod, Hanady Adam, Ethan Blandford, Joel Campbell, Joshua Castlen, Brittany Dixon, Ginger Gilbert, Aaron Hall, Philip Kreisle, Jessica Lasher, Bethany Oakes, Allison Speer, Maximilian Valentine, Naga Satya Venkateswara Ra Nagisetty, Rony Jose, Robert W. Rooney, David Hains:
Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016. BMC Bioinform. 17(S-10) (2016) - [j16]Xinyang Deng, Qi Liu, Yong Deng, Sankaran Mahadevan:
An improved method to construct basic probability assignment based on the confusion matrix for classification problem. Inf. Sci. 340-341: 250-261 (2016) - 2015
- [j15]Xinyang Deng, Qi Liu, Yong Deng:
Newborns prediction based on a belief Markov chain model. Appl. Intell. 43(3): 473-486 (2015) - 2014
- [j14]Xue Zhong, Qi Liu, Yu Shyr:
CLIP-EZ: a computational tool for HITS-CLIP data analysis. BMC Bioinform. 15(S-10): P1 (2014) - 2013
- [j13]Qi Liu, Shilin Zhao, Pei-Fang Su, Shyr Yu:
Gene and isoform expression signatures associated with tumor stage in kidney renal clear cell carcinoma. BMC Syst. Biol. 7(S-5): S7 (2013) - 2011
- [j12]Tao Huang, Lei Liu, Qi Liu, Guohui Ding, Yejun Tan, Zhidong Tu, Yixue Li, Hongyue Dai, Lu Xie:
The role of Hepatitis C Virus in the dynamic protein interaction networks of hepatocellular cirrhosis and carcinoma. Int. J. Comput. Biol. Drug Des. 4(1): 5-18 (2011) - 2010
- [j11]Qi Liu, Yejun Tan, Tao Huang, Guohui Ding, Zhidong Tu, Lei Liu, Yixue Li, Hongyue Dai, Lu Xie:
TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information. BMC Bioinform. 11(S-11): S5 (2010) - [j10]Deqiang Han, Yong Deng, Qi Liu:
Erratum to "Combining belief functions based on distance of evidence" [Decision Support Systems Volume(38/3)489-493]. Decis. Support Syst. 50(1): 360 (2010) - 2007
- [j9]Jingchun Sun, Yan Sun, Guohui Ding, Qi Liu, Chuan Wang, Youyu He, Tieliu Shi, Yixue Li, Zhongming Zhao:
InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes. BMC Bioinform. 8 (2007) - 2006
- [j8]Guohui Ding, Jiuhong Kang, Qi Liu, Tieliu Shi, Gang Pei, Yixue Li:
Insights into the Coupling of Duplication Events and Macroevolution from an Age Profile of Animal Transmembrane Gene Families. PLoS Comput. Biol. 2(8) (2006) - 2005
- [j7]Jingchun Sun, Jinlin Xu, Zhen Liu, Qi Liu, Aimin Zhao, Tieliu Shi, Yi-Xue Li:
Refined phylogenetic profiles method for predicting protein-protein interactions. Bioinform. 21(16): 3409-3415 (2005) - [j6]Yong Deng, Qi Liu:
A topsis-based centroid-index ranking method of fuzzy numbers and its application in decision-making. Cybern. Syst. 36(6): 581-595 (2005) - 2004
- [j5]Yong Deng, Qi Liu, Yi-Xue Li:
Scoring hidden Markov models to discriminate -barrel membrane proteins. Comput. Biol. Chem. 28(3): 189-194 (2004) - [j4]Yong Deng, Wenkang Shi, Zhenfu Zhu, Qi Liu:
Combining belief functions based on distance of evidence. Decis. Support Syst. 38(3): 489-493 (2004) - [j3]Yong Deng, Wenkang Shi, Feng Du, Qi Liu:
A new similarity measure of generalized fuzzy numbers and its application to pattern recognition. Pattern Recognit. Lett. 25(8): 875-883 (2004) - 2003
- [j2]Qi Liu, Yisheng Zhu, Baohua Wang, Yi-Xue Li:
A HMM-based method to predict the transmembrane regions of \beta-barrel membrane proteins. Comput. Biol. Chem. 27(1): 69-76 (2003) - [j1]Qi Liu, Yisheng Zhu, Baohua Wang, Yi-Xue Li:
Identification of -barrel membrane proteins based on amino acid composition properties and predicted secondary structure. Comput. Biol. Chem. 27(3): 355-361 (2003)
Conference and Workshop Papers
- 2023
- [c4]Can Cui, Yaohong Wang, Shunxing Bao, Yucheng Tang, Ruining Deng, Lucas W. Remedios, Zuhayr Asad, Joseph T. Roland, Ken S. Lau, Qi Liu, Lori A. Coburn, Keith T. Wilson, Bennett A. Landman, Yuankai Huo:
Feasibility of Universal Anomaly Detection Without Knowing the Abnormality in Medical Images. MILLanD@MICCAI 2023: 82-92 - 2022
- [c3]Ruining Deng, Can Cui, Lucas W. Remedios, Shunxing Bao, R. Michael Womick, Sophie Chiron, Jia Li, Joseph T. Roland, Ken S. Lau, Qi Liu, Keith T. Wilson, Yaohong Wang, Lori A. Coburn, Bennett A. Landman, Yuankai Huo:
Cross-Scale Attention Guided Multi-instance Learning for Crohn's Disease Diagnosis with Pathological Images. MMMI@MICCAI 2022: 24-33 - [c2]Shunxing Bao, Jia Li, Can Cui, Yucheng Tang, Ruining Deng, Lucas W. Remedios, Ho Hin Lee, Sophie Chiron, Nathan Heath Patterson, Ken S. Lau, Lori A. Coburn, Keith T. Wilson, Joseph T. Roland, Bennett A. Landman, Qi Liu, Yuankai Huo:
MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging. MOVI@MICCAI 2022: 42-52 - 2010
- [c1]Tao Huang, Guohui Ding, Yixue Li, Lei Liu, Eugene Tan, Hongyue Dai, Qi Liu, Zhidong Tu, Lu Xie:
Dysfunctional gene/protein networks in hepatitis C virus-induced hepatocellular cirrhosis and carcinoma. BCB 2010: 502-507
Informal and Other Publications
- 2023
- [i7]Ruining Deng, Can Cui, Lucas W. Remedios, Shunxing Bao, R. Michael Womick, Sophie Chiron, Jia Li, Joseph T. Roland, Ken S. Lau, Qi Liu, Keith T. Wilson, Yaohong Wang, Lori A. Coburn, Bennett A. Landman, Yuankai Huo:
Cross-scale Multi-instance Learning for Pathological Image Diagnosis. CoRR abs/2304.00216 (2023) - 2022
- [i6]Ruining Deng, Can Cui, Lucas W. Remedios, Shunxing Bao, R. Michael Womick, Sophie Chiron, Jia Li, Joseph T. Roland, Ken S. Lau, Qi Liu, Keith T. Wilson, Yaohong Wang, Lori A. Coburn, Bennett A. Landman, Yuankai Huo:
Cross-scale Attention Guided Multi-instance Learning for Crohn's Disease Diagnosis with Pathological Images. CoRR abs/2208.07322 (2022) - 2015
- [i5]Xinyang Deng, Zhen Wang, Qi Liu, Yong Deng, Yu Shyr:
Impact of Preference and Equivocators on Opinion Dynamics with Evolutionary Game Framework. CoRR abs/1507.07950 (2015) - [i4]Xinyang Deng, Yong Deng, Qi Liu, Zhen Wang:
A quantum extension to inspection game. CoRR abs/1507.07951 (2015) - [i3]Xinyang Deng, Yong Deng, Qi Liu, Zhen Wang:
Quantum games of opinion formation based on the Marinatto-Weber quantum game scheme. CoRR abs/1507.07966 (2015) - 2014
- [i2]Xinyang Deng, Qi Liu, Yong Deng:
Generalized prisoner's dilemma. CoRR abs/1403.3595 (2014) - [i1]Xinyang Deng, Zhen Wang, Qi Liu, Yong Deng, Sankaran Mahadevan:
A belief-based evolutionarily stable strategy. CoRR abs/1406.0045 (2014)
Coauthor Index
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