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Journal Articles
- 2022
[j10]Gang Wu
, Marc D. Ruben, Lauren J. Francey, Yin Yeng Lee, Ron C. Anafi, John B. Hogenesch:
An in silico genome-wide screen for circadian clock strength in human samples. Bioinform. 38(24): 5375-5382 (2022)- 2021
- [j9]Gang Wu, Lauren J. Francey, Marc D. Ruben, John B. Hogenesch:
Normalized coefficient of variation (nCV): a method to evaluate circadian clock robustness in population scale data. Bioinform. 37(23): 4581-4583 (2021) - 2016
- [j8]Gang Wu, Ron C. Anafi, Michael Hughes, Karl Kornacker, John B. Hogenesch:
MetaCycle: an integrated R package to evaluate periodicity in large scale data. Bioinform. 32(21): 3351-3353 (2016) - 2015
- [j7]Katharina E. Hayer, Angel D. Pizarro, Nicholas F. Lahens, John B. Hogenesch, Gregory R. Grant:
Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data. Bioinform. 31(24): 3938-3945 (2015) - 2013
- [j6]Anastasia Deckard, Ron C. Anafi, John B. Hogenesch, Steven B. Haase, John Harer:
Design and analysis of large-scale biological rhythm studies: a comparison of algorithms for detecting periodic signals in biological data. Bioinform. 29(24): 3174-3180 (2013) - [j5]Angel D. Pizarro, Katharina Hayer, Nicholas F. Lahens, John B. Hogenesch:
CircaDB: a database of mammalian circadian gene expression profiles. Nucleic Acids Res. 41(Database-Issue): 1009-1013 (2013) - 2011
- [j4]Gregory R. Grant, Michael H. Farkas, Angel D. Pizarro, Nicholas F. Lahens, Jonathan Schug, Brian P. Brunk, Christian J. Stoeckert Jr., John B. Hogenesch, Eric A. Pierce:
Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). Bioinform. 27(18): 2518-2528 (2011) - 2010
- [j3]Jon W. Huss III, Pierre Lindenbaum, Michael Martone, Donabel Roberts, Angel D. Pizarro, Faramarz Valafar, John B. Hogenesch, Andrew I. Su:
The Gene Wiki: community intelligence applied to human gene annotation. Nucleic Acids Res. 38(Database-Issue): 633-639 (2010) - 2008
- [j2]Tom S. Price, Julie E. Baggs, Anne M. Curtis, Garret A. FitzGerald, John B. Hogenesch:
WAVECLOCK: wavelet analysis of circadian oscillation. Bioinform. 24(23): 2794-2795 (2008) - [j1]Longlong Yang, John R. Walker, John B. Hogenesch, Russell S. Thomas:
NetAtlas: A Cytoscape Plugin to Examine Signaling Networks Based on Tissue Gene Expression. Silico Biol. 8(1): 47-52 (2008)
Coauthor Index
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