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ORCIDQiao Jin 0001
Person information
- affiliation: Tsinghua University, School of Medicine, Beijing, China
- affiliation (2017 - 2019): University of Pittsburgh, Department of Biomedical Informatics, Pittsburgh, PA, USA
Other persons with the same name
- Qiao Jin — disambiguation page
- Qiao Jin 0002
![[0000-0001-5493-1343]](https://dblp.dagstuhl.de/img/orcid-mark.12x12.png "0000-0001-5493-1343")
— University of Minnesota, Department of Computer Science and Engineering, Minneapolis, MN, USA (and 2 more)
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2020 – today
- 2024
[j3]Qiao Jin, Yifan Yang, Qingyu Chen, Zhiyong Lu:
GeneGPT: augmenting large language models with domain tools for improved access to biomedical information. Bioinform. 40(2) (2024)- [i24]Qiao Jin, Fangyuan Chen, Yiliang Zhou, Ziyang Xu, Justin M. Cheung, Robert Chen, Ronald M. Summers, Justin F. Rousseau, Peiyun Ni, Marc J. Landsman, Sally L. Baxter, Subhi J. Al'Aref, Yijia Li, Michael F. Chiang, Yifan Peng, Zhiyong Lu:
Hidden Flaws Behind Expert-Level Accuracy of GPT-4 Vision in Medicine. CoRR abs/2401.08396 (2024) - [i23]Chih-Hsuan Wei, Alexis Allot, Po-Ting Lai, Robert Leaman, Shubo Tian, Ling Luo, Qiao Jin, Zhizheng Wang, Qingyu Chen, Zhiyong Lu:
PubTator 3.0: an AI-powered Literature Resource for Unlocking Biomedical Knowledge. CoRR abs/2401.11048 (2024) - [i22]Yifan Yang, Xiaoyu Liu, Qiao Jin, Furong Huang, Zhiyong Lu:
Unmasking and Quantifying Racial Bias of Large Language Models in Medical Report Generation. CoRR abs/2401.13867 (2024) - [i21]Qingqing Zhu, Xiuying Chen, Qiao Jin, Benjamin Hou, Tejas Sudharshan Mathai, Pritam Mukherjee, Xin Gao, Ronald M. Summers, Zhiyong Lu:
Leveraging Professional Radiologists' Expertise to Enhance LLMs' Evaluation for Radiology Reports. CoRR abs/2401.16578 (2024) - [i20]Zhe He, Balu Bhasuran, Qiao Jin, Shubo Tian, Karim Hanna, Cindy Shavor, Lisbeth Y. Garcia Arguello, Patrick Murray, Zhiyong Lu:
Quality of Answers of Generative Large Language Models vs Peer Patients for Interpreting Lab Test Results for Lay Patients: Evaluation Study. CoRR abs/2402.01693 (2024) - [i19]Ashley Shin, Qiao Jin, James Anibal, Zhiyong Lu:
Harnessing PubMed User Query Logs for Post Hoc Explanations of Recommended Similar Articles. CoRR abs/2402.03484 (2024) - [i18]Guangzhi Xiong, Qiao Jin, Zhiyong Lu, Aidong Zhang:
Benchmarking Retrieval-Augmented Generation for Medicine. CoRR abs/2402.13178 (2024) - [i17]Qingqing Zhu, Benjamin Hou, Tejas Sudharshan Mathai, Pritam Mukherjee, Qiao Jin, Xiuying Chen, Zhizheng Wang, Ruida Cheng, Ronald M. Summers, Zhiyong Lu:
Decomposing Vision-based LLM Predictions for Auto-Evaluation with GPT-4. CoRR abs/2403.05680 (2024) - 2023
- [j2]Qiao Jin, Won Kim, Qingyu Chen, Donald C. Comeau, Lana Yeganova, W. John Wilbur, Zhiyong Lu:
MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval. Bioinform. 39(10) (2023) - [j1]Qiao Jin, Zheng Yuan, Guangzhi Xiong, Qianlan Yu, Huaiyuan Ying, Chuanqi Tan, Mosha Chen, Songfang Huang, Xiaozhong Liu, Sheng Yu:
Biomedical Question Answering: A Survey of Approaches and Challenges. ACM Comput. Surv. 55(2): 35:1-35:36 (2023) - [c12]Ashley Shin, Qiao Jin, Zhiyong Lu:
Multi-stage Literature Retrieval System Trained by PubMed Search Logs for Biomedical Question Answering. CLEF (Working Notes) 2023: 178-189 - [c11]Zheng Yuan, Qiao Jin, Chuanqi Tan, Zhengyun Zhao, Hongyi Yuan, Fei Huang, Songfang Huang:
RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training. ACM Multimedia 2023: 547-556 - [c10]Qiao Jin, Andrew Shin, Zhiyong Lu:
LADER: Log-Augmented DEnse Retrieval for Biomedical Literature Search. SIGIR 2023: 2092-2097 - [i16]Zheng Yuan, Qiao Jin, Chuanqi Tan, Zhengyun Zhao, Hongyi Yuan, Fei Huang, Songfang Huang:
RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training. CoRR abs/2303.00534 (2023) - [i15]Qiao Jin, Andrew Shin, Zhiyong Lu:
LADER: Log-Augmented DEnse Retrieval for Biomedical Literature Search. CoRR abs/2304.04590 (2023) - [i14]Qiao Jin, Yifan Yang, Qingyu Chen, Zhiyong Lu:
GeneGPT: Augmenting Large Language Models with Domain Tools for Improved Access to Biomedical Information. CoRR abs/2304.09667 (2023) - [i13]Shubo Tian, Qiao Jin, Lana Yeganova, Po-Ting Lai, Qingqing Zhu, Xiuying Chen, Yifan Yang, Qingyu Chen, Won Kim, Donald C. Comeau, Rezarta Islamaj, Aadit Kapoor, Xin Gao, Zhiyong Lu:
Opportunities and Challenges for ChatGPT and Large Language Models in Biomedicine and Health. CoRR abs/2306.10070 (2023) - [i12]Qiao Jin, Won Kim, Qingyu Chen, Donald C. Comeau, Lana Yeganova, W. John Wilbur, Zhiyong Lu:
BioCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval. CoRR abs/2307.00589 (2023) - [i11]Qiao Jin, Robert Leaman, Zhiyong Lu:
PubMed and Beyond: Recent Advances and Best Practices in Biomedical Literature Search. CoRR abs/2307.09683 (2023) - [i10]Qiao Jin, Zifeng Wang, Charalampos S. Floudas, Jimeng Sun, Zhiyong Lu:
Matching Patients to Clinical Trials with Large Language Models. CoRR abs/2307.15051 (2023) - [i9]Gongbo Zhang, Qiao Jin, Denis Jered McInerney, Yong Chen, Fei Wang, Curtis L. Cole, Qian Yang, Yanshan Wang, Bradley A. Malin, Mor Peleg, Byron C. Wallace, Zhiyong Lu, Chunhua Weng, Yifan Peng:
Leveraging Generative AI for Clinical Evidence Summarization Needs to Achieve Trustworthiness. CoRR abs/2311.11211 (2023) - 2022
- [i8]Zhengyun Zhao, Qiao Jin, Sheng Yu:
PMC-Patients: A Large-scale Dataset of Patient Notes and Relations Extracted from Case Reports in PubMed Central. CoRR abs/2202.13876 (2022) - 2021
- [c9]Dejie Chang, Mosha Chen, Chaozhen Liu, Liping Liu, Dongdong Li, Wei Li, Fei Kong, Bangchang Liu, Xiaobin Luo, Ji Qi, Qiao Jin, Bin Xu:
DiaKG: An Annotated Diabetes Dataset for Medical Knowledge Graph Construction. CCKS 2021: 308-314 - [c8]Qiao Jin, Chuanqi Tan, Zhengyun Zhao, Zheng Yuan, Songfang Huang:
Alibaba DAMO Academy at TREC Clinical Trials 2021: ExploringEmbedding-based First-stage Retrieval with TrialMatcher. TREC 2021 - [i7]Qiao Jin, Zheng Yuan, Guangzhi Xiong, Qianlan Yu, Chuanqi Tan, Mosha Chen, Songfang Huang, Xiaozhong Liu, Sheng Yu:
Biomedical Question Answering: A Comprehensive Review. CoRR abs/2102.05281 (2021) - [i6]Dejie Chang, Mosha Chen, Chaozhen Liu, Liping Liu, Dongdong Li, Wei Li, Fei Kong, Bangchang Liu, Xiaobin Luo, Ji Qi, Qiao Jin, Bin Xu:
DiaKG: an Annotated Diabetes Dataset for Medical Knowledge Graph Construction. CoRR abs/2105.15033 (2021) - 2020
- [c7]Qiao Jin, Haoyang Ding, Linfeng Li, Haitao Huang, Lei Wang, Jun Yan:
Tackling MeSH Indexing Dataset Shift with Time-Aware Concept Embedding Learning. DASFAA (3) 2020: 474-488 - [c6]Qiao Jin, Chuanqi Tan, Mosha Chen, Xiaozhong Liu, Songfang Huang:
Predicting Clinical Trial Results by Implicit Evidence Integration. EMNLP (1) 2020: 1461-1477 - [c5]Qiao Jin, Chuanqi Tan, Mosha Chen, Ming Yan, Songfang Huang, Ningyu Zhang, Xiaozhong Liu:
Aliababa DAMO Academy at TREC Precision Medicine 2020: State-of-the-art Evidence Retriever for Precision Medicine with Expert-in-the-loop Active Learning. TREC 2020 - [i5]Qiao Jin, Chuanqi Tan, Mosha Chen, Xiaozhong Liu, Songfang Huang:
Predicting Clinical Trial Results by Implicit Evidence Integration. CoRR abs/2010.05639 (2020)
2010 – 2019
- 2019
- [c4]Qiao Jin, Jinling Liu, Xinghua Lu:
Deep Contextualized Biomedical Abbreviation Expansion. BioNLP@ACL 2019: 88-96 - [c3]Qiao Jin, Bhuwan Dhingra, Zhengping Liu, William W. Cohen, Xinghua Lu:
PubMedQA: A Dataset for Biomedical Research Question Answering. EMNLP/IJCNLP (1) 2019: 2567-2577 - [c2]Haohan Wang, Xiang Liu, Yifeng Tao, Wenting Ye, Qiao Jin, William W. Cohen, Eric P. Xing:
Automatic Human-like Mining and Constructing Reliable Genetic Association Database with Deep Reinforcement Learning. PSB 2019: 112-123 - [i4]Qiao Jin, Bhuwan Dhingra, William W. Cohen, Xinghua Lu:
Probing Biomedical Embeddings from Language Models. CoRR abs/1904.02181 (2019) - [i3]Qiao Jin, Jinling Liu, Xinghua Lu:
Deep Contextualized Biomedical Abbreviation Expansion. CoRR abs/1906.03360 (2019) - [i2]Qiao Jin, Bhuwan Dhingra, Zhengping Liu, William W. Cohen, Xinghua Lu:
PubMedQA: A Dataset for Biomedical Research Question Answering. CoRR abs/1909.06146 (2019) - 2018
- [c1]Bhuwan Dhingra, Qiao Jin, Zhilin Yang, William W. Cohen, Ruslan Salakhutdinov:
Neural Models for Reasoning over Multiple Mentions Using Coreference. NAACL-HLT (2) 2018: 42-48 - [i1]Bhuwan Dhingra, Qiao Jin, Zhilin Yang, William W. Cohen, Ruslan Salakhutdinov:
Neural Models for Reasoning over Multiple Mentions using Coreference. CoRR abs/1804.05922 (2018)
Coauthor Index
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