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ORCIDTak Wah Lam
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- affiliation: University of Hong Kong
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2020 – today
- 2024
[j94]Zhenxian Zheng
, Yingxuan Ren, Lei Chen, Angel On Ki Wong, Shumin Li, Xian Yu, Tak Wah Lam, Ruibang Luo:
Repun: an accurate small variant representation unification method for multiple sequencing platforms. Briefings Bioinform. 26(1) (2024)- 2023
- [j93]Huijing Yu, Zhenxian Zheng, Junhao Su, Tak Wah Lam, Ruibang Luo:
Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP. BMC Bioinform. 24(1): 308 (2023) - [j92]Mengmeng Kuang, Yong Zhang, Tak Wah Lam, Hing-Fung Ting:
MLProbs: A Data-Centric Pipeline for Better Multiple Sequence Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 20(1): 524-533 (2023) - [c124]Lei Chen, Junhao Su, Tak Wah Lam, Ruibang Luo:
Exploring Pair-Aware Triangular Attention for Biomedical Relation Extraction. BCB 2023: 35:1-35:5 - [c123]Lei Chen, Junhao Su, Zhenxian Zheng, Tak Wah Lam, Ruibang Luo:
Large-scale Dataset and Effective Model for Variant-Disease Associations Extraction. BCB 2023: 37:1-37:6 - [c122]Tik Yu Yim, Yuxuan Zhang, Wenting Tan, Tak Wah Lam, Siu Ming Yiu:
Meticulously Analyzing ESG Disclosure: A Data-Driven Approach. IEEE Big Data 2023: 2884-2889 - 2022
- [j91]Junhao Su, Zhenxian Zheng, Syed Shakeel Ahmed, Tak Wah Lam, Ruibang Luo:
Clair3-trio: high-performance Nanopore long-read variant calling in family trios with trio-to-trio deep neural networks. Briefings Bioinform. 23(5) (2022) - [j90]Yekai Zhou, Amy Wing-Sze Leung, Syed Shakeel Ahmed, Tak Wah Lam, Ruibang Luo:
Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing. BMC Bioinform. 23(1): 465 (2022) - [j89]Zhenxian Zheng, Shumin Li, Junhao Su, Amy Wing-Sze Leung, Tak Wah Lam, Ruibang Luo:
Symphonizing pileup and full-alignment for deep learning-based long-read variant calling. Nat. Comput. Sci. 2(12): 797-803 (2022) - 2021
- [j88]Marek Chrobak, Mordecai J. Golin, Tak Wah Lam, Dorian Nogneng:
Scheduling with gaps: new models and algorithms. J. Sched. 24(4): 381-403 (2021) - [c121]Ye Wu, Hing-Fung Ting, Tak Wah Lam, Ruibang Luo:
BioNumQA-BERT: answering biomedical questions using numerical facts with a deep language representation model. BCB 2021: 57:1-57:6 - 2020
- [j87]Ruibang Luo, Tak Wah Lam, Michael C. Schatz:
Skyhawk: an artificial neural network-based discriminator for reviewing clinically significant genomic variants. Int. J. Comput. Biol. Drug Des. 13(5/6): 431-437 (2020) - [j86]Ruibang Luo, Chak-Lim Wong, Yat-Sing Wong, Chi Ian Tang, Chi-Man Liu, Chi-Ming Leung, Tak Wah Lam:
Exploring the limit of using a deep neural network on pileup data for germline variant calling. Nat. Mach. Intell. 2(4): 220-227 (2020) - [c120]Ye Wu, Ruibang Luo, Tak Wah Lam, Hing-Fung Ting, Junwen Wang:
Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long reads. BCB 2020: 15:1-15:7 - [c119]Wui Wang Lui, Amy Wing-Sze Leung, Henry C. M. Leung, Yan Xin, Jade L. L. Teng, Patrick C. Y. Woo, Tak Wah Lam, Ruibang Luo:
MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read Metagenomics. BIBM 2020: 329-336 - [c118]Xu Cao, Fangzhou Lan, Chi-Man Liu, Tak Wah Lam, Ruibang Luo:
ChromSeg: Two-Stage Framework for Overlapping Chromosome Segmentation and Reconstruction. BIBM 2020: 2335-2342
2010 – 2019
- 2019
- [c117]Ye Wu, Ruibang Luo, Henry C. M. Leung, Hing-Fung Ting, Tak Wah Lam:
RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature. RECOMB 2019: 272-284 - 2018
- [j85]Wing-Kai Hon, Tak Wah Lam, Rahul Shah, Sharma V. Thankachan, Hing-Fung Ting, Yilin Yang:
Dictionary Matching with a Bounded Gap in Pattern or in Text. Algorithmica 80(2): 698-713 (2018) - [j84]Huijun Mai, Yifan Zhang, Dinghua Li, Henry Chi-Ming Leung, Ruibang Luo, Chi-Kwong Wong, Hing-Fung Ting, Tak Wah Lam:
AC-DIAMOND v1: accelerating large-scale DNA-protein alignment. Bioinform. 34(21): 3744-3746 (2018) - [c116]Dinghua Li, Henry Chi-Ming Leung, Chi-Kwong Wong, Yifan Zhang, Wai-Chun Law, Yan Xin, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam:
MegaPath: Low-Similarity Pathogen Detection from Metagenomic NGS Data (Extended Abstract). ICCABS 2018: 1 - 2017
- [j83]Dinghua Li, Yukun Huang, Henry C. M. Leung, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam:
MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs. BMC Bioinform. 18(S-12): 67-75 (2017) - [j82]Haobin Yao, Tak Wah Lam, H. F. Ting, Siu-Ming Yiu, Yadong Wang, Bo Liu:
Accurate annotation of metagenomic data without species-level references. Int. J. Data Min. Bioinform. 19(4): 283-297 (2017) - 2016
- [j81]Yongtao Ye, Tak Wah Lam, Hing-Fung Ting:
PnpProbs: a better multiple sequence alignment tool by better handling of guide trees. BMC Bioinform. 17(S-8): 285 (2016) - [c115]Haobin Yao, Tak Wah Lam, Hing-Fung Ting, Siu-Ming Yiu, Yadong Wang, Bo Liu:
Accurate annotation of metagenomic data without species-level references. BIBM 2016: 59-64 - [c114]Huijun Mai, Dinghua Li, Yifan Zhang, Henry Chi-Ming Leung, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam:
AC-DIAMOND: Accelerating Protein Alignment via Better SIMD Parallelization and Space-Efficient Indexing. IWBBIO 2016: 426-433 - [r2]Tak Wah Lam:
Parallel Connectivity and Minimum Spanning Trees. Encyclopedia of Algorithms 2016: 1514-1516 - 2015
- [j80]Wing-Kai Hon, Tsung-Han Ku, Tak Wah Lam, Rahul Shah, Siu-Lung Tam, Sharma V. Thankachan, Jeffrey Scott Vitter:
Compressing Dictionary Matching Index via Sparsification Technique. Algorithmica 72(2): 515-538 (2015) - [j79]Leizhen Cai, Siu-Wing Cheng, Tak Wah Lam:
Guest Editors Foreword. Algorithmica 73(4): 621-622 (2015) - [j78]Dinghua Li, Chi-Man Liu, Ruibang Luo, Kunihiko Sadakane, Tak Wah Lam:
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. Bioinform. 31(10): 1674-1676 (2015) - [j77]Min Ou, Ricky Ma, Jeanno Cheung, Katie Lo, Patrick Yee, Tewei Luo, T. L. Chan, Chun Hang Au, Ava Kwong, Ruibang Luo, Tak Wah Lam:
database.bio: a web application for interpreting human variations. Bioinform. 31(24): 4035-4037 (2015) - [j76]Qing Zhan, Yongtao Ye, Tak Wah Lam, Siu-Ming Yiu, Yadong Wang, Hing-Fung Ting:
Improving multiple sequence alignment by using better guide trees. BMC Bioinform. 16(S-5): S4 (2015) - [j75]Ruibang Luo, Jeanno Cheung, Edward Wu, Heng Wang, Sze-Hang Chan, Wai-Chun Law, Guangzhu He, Chang Yu, Chi-Man Liu, Dazong Zhou, Yingrui Li, Ruiqiang Li, Jun Wang, Xiaoqian Zhu, Shaoliang Peng, Tak Wah Lam:
MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC). BMC Bioinform. 16(S-7): S10 (2015) - [j74]Jianqiao Zhu, Ho-Leung Chan, Tak Wah Lam:
Non-clairvoyant Weighted Flow Time Scheduling on Different Multi-processor Models. Theory Comput. Syst. 56(1): 82-95 (2015) - [j73]Yongtao Ye, David Wai-Lok Cheung, Yadong Wang, Siu-Ming Yiu, Qing Zhan, Tak Wah Lam, Hing-Fung Ting:
GLProbs: Aligning Multiple Sequences Adaptively. IEEE ACM Trans. Comput. Biol. Bioinform. 12(1): 67-78 (2015) - [c113]Marek Chrobak, Mordecai J. Golin, Tak Wah Lam, Dorian Nogneng:
Scheduling with Gaps: New Models and Algorithms. CIAC 2015: 114-126 - [c112]Wing-Kai Hon, Tak Wah Lam, Rahul Shah, Sharma V. Thankachan, Hing-Fung Ting, Yilin Yang:
Dictionary Matching with Uneven Gaps. CPM 2015: 247-260 - [c111]Huijun Mai, Tak Wah Lam, Hing-Fung Ting:
A simple and economical method for improving whole-genome alignment. ICCABS 2015: 1 - [c110]Menglu Li, Micheal Cheng, Yongtao Ye, Wing-Kai Hon, Hing-Fung Ting, Tak Wah Lam, Cy Tang, Thomas Wong, Siu-Ming Yiu:
Predicting RNA Secondary Structures: One-grammar-fits-all Solution. ISBRA 2015: 211-222 - 2014
- [j72]Yinlong Xie, Gengxiong Wu, Jingbo Tang, Ruibang Luo, Jordan Patterson, Shanlin Liu, Weihua Huang, Guangzhu He, Shengchang Gu, Shengkang Li, Xin Zhou, Tak Wah Lam, Yingrui Li, Xun Xu, Gane Ka-Shu Wong, Jun Wang:
SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads. Bioinform. 30(12): 1660-1666 (2014) - [j71]Weixin Wang, Panwen Wang, Feng Xu, Ruibang Luo, Maria P. Wong, Tak Wah Lam, Junwen Wang:
FaSD-somatic: a fast and accurate somatic SNV detection algorithm for cancer genome sequencing data. Bioinform. 30(17): 2498-2500 (2014) - [i11]Chi-Man Liu, Ruibang Luo, Tak Wah Lam:
GPU-Accelerated BWT Construction for Large Collection of Short Reads. CoRR abs/1401.7457 (2014) - [i10]Sze-Hang Chan, Jeanno Cheung, Edward Wu, Heng Wang, Chi-Man Liu, Xiaoqian Zhu, Shaoliang Peng, Ruibang Luo, Tak Wah Lam:
MICA: A fast short-read aligner that takes full advantage of Intel Many Integrated Core Architecture (MIC). CoRR abs/1402.4876 (2014) - [i9]Marek Chrobak, Mordecai J. Golin, Tak Wah Lam, Dorian Nogneng:
Scheduling with Gaps: New Models and Algorithms. CoRR abs/1410.7092 (2014) - 2013
- [j70]Tak Wah Lam, Lap-Kei Lee, Isaac Kar-Keung To, Prudence W. H. Wong:
Online Speed Scaling Based on Active Job Count to Minimize Flow Plus Energy. Algorithmica 65(3): 605-633 (2013) - [j69]Jikun Wu, Wenqian Zhang, Songbo Huang, Zengquan He, Yanbing Cheng, Jun Wang, Tak Wah Lam, Zhiyu Peng, Siu-Ming Yiu:
SOAPfusion: a robust and effective computational fusion discovery tool for RNA-seq reads. Bioinform. 29(23): 2971-2978 (2013) - [j68]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee:
Scheduling for weighted flow time and energy with rejection penalty. Theor. Comput. Sci. 470: 93-104 (2013) - [c109]Yongtao Ye, David W. Cheung, Yadong Wang, Siu-Ming Yiu, Qing Zhan, Tak Wah Lam, Hing-Fung Ting:
GLProbs: Aligning multiple sequences adaptively. BCB 2013: 152 - [c108]Ho-Leung Chan, Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee, Rongbin Li, Chi-Man Liu:
Competitive Online Algorithms for Multiple-Machine Power Management and Weighted Flow Time. CATS 2013: 11-20 - [c107]Xuan Liu, David Wai-Lok Cheung, Hing-Fung Ting, Tak Wah Lam, Siu-Ming Yiu:
LCR_Finder: A de Novo Low Copy Repeat Finder for Human Genome. ISBRA 2013: 125-136 - [c106]Bay-Yuan Hsu, Thomas K. F. Wong, Wing-Kai Hon, Xinyi Liu, Tak Wah Lam, Siu-Ming Yiu:
A Local Structural Prediction Algorithm for RNA Triple Helix Structure. PRIB 2013: 102-113 - [c105]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee, Jianqiao Zhu:
Nonclairvoyant sleep management and flow-time scheduling on multiple processors. SPAA 2013: 261-270 - [e1]Leizhen Cai, Siu-Wing Cheng, Tak Wah Lam:
Algorithms and Computation - 24th International Symposium, ISAAC 2013, Hong Kong, China, December 16-18, 2013, Proceedings. Lecture Notes in Computer Science 8283, Springer 2013, ISBN 978-3-642-45029-7 [contents] - 2012
- [j67]Ho-Leung Chan, Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting:
Continuous Monitoring of Distributed Data Streams over a Time-Based Sliding Window. Algorithmica 62(3-4): 1088-1111 (2012) - [j66]Chi-Man Liu, Thomas K. F. Wong, Edward Wu, Ruibang Luo, Siu-Ming Yiu, Yingrui Li, Bingqiang Wang, Chang Yu, Xiaowen Chu, Kaiyong Zhao, Ruiqiang Li, Tak Wah Lam:
SOAP3: ultra-fast GPU-based parallel alignment tool for short reads. Bioinform. 28(6): 878-879 (2012) - [j65]Binghang Liu, Jianying Yuan, Siu-Ming Yiu, Zhenyu Li, Yinlong Xie, Yanxiang Chen, Yujian Shi, Hao Zhang, Yingrui Li, Tak Wah Lam, Ruibang Luo:
COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly. Bioinform. 28(22): 2870-2874 (2012) - [j64]Tak Wah Lam, Lap-Kei Lee, Isaac Kar-Keung To, Prudence W. H. Wong:
Improved multi-processor scheduling for flow time and energy. J. Sched. 15(1): 105-116 (2012) - [j63]Thomas K. F. Wong, Y. S. Chiu, Tak Wah Lam, Siu-Ming Yiu:
Memory Efficient Algorithms for Structural Alignment of RNAs with Pseudoknots. IEEE ACM Trans. Comput. Biol. Bioinform. 9(1): 161-168 (2012) - [j62]Christopher Ma, Thomas K. F. Wong, Tak Wah Lam, Wing-Kai Hon, Kunihiko Sadakane, Siu-Ming Yiu:
An Efficient Alignment Algorithm for Searching Simple Pseudoknots over Long Genomic Sequence. IEEE ACM Trans. Comput. Biol. Bioinform. 9(6): 1629-1638 (2012) - [c104]Ho-Leung Chan, Tak Wah Lam, Rongbin Li:
Online Flow Time Scheduling in the Presence of Preemption Overhead. APPROX-RANDOM 2012: 85-97 - [c103]Ruibang Luo, Chang Yu, Chi-Man Liu, Tak Wah Lam, Thomas K. F. Wong, Siu-Ming Yiu, Ruiqiang Li, Hing-Fung Ting:
Efficient SNP-sensitive alignment and database-assisted SNP calling for low coverage samples. BCB 2012: 163-169 - [c102]Ho-Leung Chan, Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee, Jianqiao Zhu:
Non-clairvoyant weighted flow time scheduling with rejection penalty. SPAA 2012: 246-254 - 2011
- [j61]Ho-Leung Chan, Jeff Edmonds, Tak Wah Lam, Lap-Kei Lee, Alberto Marchetti-Spaccamela, Kirk Pruhs:
Nonclairvoyant Speed Scaling for Flow and Energy. Algorithmica 61(3): 507-517 (2011) - [j60]Hing-Fung Ting, Lap-Kei Lee, Ho-Leung Chan, Tak Wah Lam:
Approximating Frequent Items in Asynchronous Data Stream over a Sliding Window. Algorithms 4(3): 200-222 (2011) - [j59]Thomas K. F. Wong, Kwok-Lung Wan, Bay-Yuan Hsu, Brenda W. Y. Cheung, Wing-Kai Hon, Tak Wah Lam, Siu-Ming Yiu:
RNASAlign: RNA Structural Alignment System. Bioinform. 27(15): 2151-2152 (2011) - [j58]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting, Pan Zhang:
Non-clairvoyant Scheduling for Weighted Flow Time and Energy on Speed Bounded Processors. Chic. J. Theor. Comput. Sci. 2011 (2011) - [j57]Thomas K. F. Wong, Tak Wah Lam, Wing-Kin Sung, Brenda W. Y. Cheung, Siu-Ming Yiu:
Structural Alignment of RNA with Complex Pseudoknot Structure. J. Comput. Biol. 18(1): 97-108 (2011) - [j56]Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong:
A linear size index for approximate pattern matching. J. Discrete Algorithms 9(4): 358-364 (2011) - [j55]Ho-Leung Chan, Tak Wah Lam, Rongbin Li:
Tradeoff between energy and throughput for online deadline scheduling. Sustain. Comput. Informatics Syst. 1(3): 189-195 (2011) - [j54]Wing-Kai Hon, Tak Wah Lam, Rahul Shah, Siu-Lung Tam, Jeffrey Scott Vitter:
Cache-oblivious index for approximate string matching. Theor. Comput. Sci. 412(29): 3579-3588 (2011) - [c101]Xuan Liu, Shing-Wan Choi, Thomas K. F. Wong, Tak Wah Lam, Siu-Ming Yiu:
Detection of novel tandem duplication with next-generation sequencing. BCB 2011: 415-419 - [c100]Thomas K. F. Wong, Hui-Ting Yu, Bay-Yuan Hsu, Tak Wah Lam, Wing-Kai Hon, Siu-Ming Yiu:
Algorithms for pseudoknot classification. BCB 2011: 484-486 - [c99]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee, Chi-Man Liu, Hing-Fung Ting:
Sleep Management on Multiple Machines for Energy and Flow Time. ICALP (1) 2011: 219-231 - [c98]Ho-Leung Chan, Tak Wah Lam, Lap-Kei Lee, Jiangwei Pan, Hing-Fung Ting, Qin Zhang:
Edit Distance to Monotonicity in Sliding Windows. ISAAC 2011: 564-573 - [c97]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee:
Scheduling for Weighted Flow Time and Energy with Rejection Penalty. STACS 2011: 392-403 - [c96]Ho-Leung Chan, Tak Wah Lam, Rongbin Li:
Energy-Efficient Due Date Scheduling. TAPAS 2011: 69-80 - [c95]Jianqiao Zhu, Ho-Leung Chan, Tak Wah Lam:
Non-clairvoyant Weighted Flow Time Scheduling on Different Multi-processor Models. WAOA 2011: 137-149 - [i8]Ho-Leung Chan, Tak Wah Lam, Lap-Kei Lee, Jiangwei Pan, Hing-Fung Ting, Qin Zhang:
Edit Distance to Monotonicity in Sliding Windows. CoRR abs/1111.5386 (2011) - 2010
- [j53]Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong:
Compressed Indexes for Approximate String Matching. Algorithmica 58(2): 263-281 (2010) - [j52]Thomas K. F. Wong, Tak Wah Lam, Siu-Ming Yiu, Simon C. K. Wong:
Improving the accuracy of signal transduction pathway construction using level-2 neighbours. Int. J. Bioinform. Res. Appl. 6(6): 542-555 (2010) - [j51]Xin Han, Tak Wah Lam, Lap-Kei Lee, Isaac Kar-Keung To, Prudence W. H. Wong:
Deadline scheduling and power management for speed bounded processors. Theor. Comput. Sci. 411(40-42): 3587-3600 (2010) - [c94]Songbo Huang, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Siu-Ming Yiu:
Indexing Similar DNA Sequences. AAIM 2010: 180-190 - [c93]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting, Peng Zhang:
Non-clairvoyant Scheduling for Weighted Flow Time and Energy on Speed Bounded Processors. CATS 2010: 3-10 - [c92]Sze-Hang Chan, Tak Wah Lam, Lap-Kei Lee:
Non-clairvoyant Speed Scaling for Weighted Flow Time. ESA (1) 2010: 23-35 - [c91]Thomas K. F. Wong, Brenda W. Y. Cheung, Tak Wah Lam, Siu-Ming Yiu:
Local Structural Alignment of RNA with Affine Gap Model. ISBRA 2010: 191-202 - [c90]Ho-Leung Chan, Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting:
Continuous Monitoring of Distributed Data Streams over a Time-based Sliding Window. STACS 2010: 179-190 - [c89]Ho-Leung Chan, Tak Wah Lam, Rongbin Li:
Tradeoff between Energy and Throughput for Online Deadline Scheduling. WAOA 2010: 59-70 - [c88]Tak Wah Lam, Chi-Man Liu, Hing-Fung Ting:
Online Tracking of the Dominance Relationship of Distributed Multi-dimensional Data. WAOA 2010: 178-189
2000 – 2009
- 2009
- [j50]Ruiqiang Li, Chang Yu, Yingrui Li, Tak Wah Lam, Siu-Ming Yiu, Karsten Kristiansen, Jun Wang:
SOAP2: an improved ultrafast tool for short read alignment. Bioinform. 25(15): 1966-1967 (2009) - [j49]Thomas K. F. Wong, Tak Wah Lam, P. Y. Chan, Siu-Ming Yiu:
Correcting short reads with high error rates for improved sequencing result. Int. J. Bioinform. Res. Appl. 5(2): 224-237 (2009) - [j48]Ho-Leung Chan, Joseph Wun-Tat Chan, Tak Wah Lam, Lap-Kei Lee, Kin-Sum Mak, Prudence W. H. Wong:
Optimizing throughput and energy in online deadline scheduling. ACM Trans. Algorithms 6(1): 10:1-10:22 (2009) - [c87]Tak Wah Lam, Ruiqiang Li, Alan Tam, Simon C. K. Wong, Edward Wu, Siu-Ming Yiu:
High Throughput Short Read Alignment via Bi-directional BWT. BIBM 2009: 31-36 - [c86]Thomas K. F. Wong, Siu-Ming Yiu, Tak Wah Lam, Wing-Kin Sung:
The 2-Interval Pattern Matching Problems and Its Application to ncRNA Scanning. BICoB 2009: 79-89 - [c85]Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting, Isaac Kar-Keung To, Prudence W. H. Wong:
Sleep with Guilt and Work Faster to Minimize Flow Plus Energy. ICALP (1) 2009: 665-676 - [c84]Wing-Kai Hon, Tak Wah Lam, Rahul Shah, Siu-Lung Tam, Jeffrey Scott Vitter:
Succinct Index for Dynamic Dictionary Matching. ISAAC 2009: 1034-1043 - [c83]Alan Tam, Edward Wu, Tak Wah Lam, Siu-Ming Yiu:
Succinct Text Indexing with Wildcards. SPIRE 2009: 39-50 - [c82]Ho-Leung Chan, Jeff Edmonds, Tak Wah Lam, Lap-Kei Lee, Alberto Marchetti-Spaccamela, Kirk Pruhs:
Nonclairvoyant Speed Scaling for Flow and Energy. STACS 2009: 255-264 - [c81]Thomas K. F. Wong, Tak Wah Lam, Wing-Kin Sung, Siu-Ming Yiu:
Structural Alignment of RNA with Complex Pseudoknot Structure. WABI 2009: 403-414 - [c80]Ho-Leung Chan, Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting:
Approximating Frequent Items in Asynchronous Data Stream over a Sliding Window. WAOA 2009: 49-61 - [i7]Ho-Leung Chan, Jeff Edmonds, Tak Wah Lam, Lap-Kei Lee, Alberto Marchetti-Spaccamela, Kirk Pruhs:
Nonclairvoyant Speed Scaling for Flow and Energy. CoRR abs/0902.1260 (2009) - [i6]Ho-Leung Chan, Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting:
Continuous Monitoring of Distributed Data Streams over a Time-based Sliding Window. CoRR abs/0912.4569 (2009) - 2008
- [j47]Tak Wah Lam, Wing-Kin Sung, Swee-Seong Wong:
Improved Approximate String Matching Using Compressed Suffix Data Structures. Algorithmica 51(3): 298-314 (2008) - [j46]Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Chi-Kwong Wong, Siu-Ming Yiu:
Compressed indexing and local alignment of DNA. Bioinform. 24(6): 791-797 (2008) - [j45]Thomas K. F. Wong, Tak Wah Lam, Wanling Yang, Siu-Ming Yiu:
Finding Alternative Splicing Patterns with Strong Support from expressed Sequences on Individual exons/introns. J. Bioinform. Comput. Biol. 6(5): 1021-1033 (2008) - [j44]Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Prudence W. H. Wong, Siu-Ming Yiu:
Non-overlapping Common Substrings Allowing Mutations. Math. Comput. Sci. 1(4): 543-555 (2008) - [j43]Ho-Leung Chan, Tak Wah Lam, Kin-Shing Liu:
Extra Unit-Speed Machines Are Almost as Powerful as Speedy Machines for Flow Time Scheduling. SIAM J. Comput. 37(5): 1595-1612 (2008) - [j42]Joseph Wun-Tat Chan, Tak Wah Lam, Prudence W. H. Wong:
Dynamic bin packing of unit fractions items. Theor. Comput. Sci. 409(3): 521-529 (2008) - [j41]Tak Wah Lam, Lap-Kei Lee, Isaac Kar-Keung To, Prudence W. H. Wong:
Nonmigratory Multiprocessor Scheduling for Response Time and Energy. IEEE Trans. Parallel Distributed Syst. 19(11): 1527-1539 (2008) - [c79]