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Luis Mateus Rocha
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- affiliation: Indiana University, Bloomington, IN, USA
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2020 – today
- 2023
[j24]Felipe Xavier Costa
, Jordan C. Rozum, Austin M. Marcus, Luis M. Rocha:
Effective Connectivity and Bias Entropy Improve Prediction of Dynamical Regime in Automata Networks. Entropy 25(2): 374 (2023)- 2022
- [j23]Shijun Zhang, Heng-Yi Wu, Lei Wang, Gongbo Zhang, Luis M. Rocha, Hagit Shatkay, Lang Li:
Translational drug-interaction corpus. Database J. Biol. Databases Curation 2022(2022) (2022) - [j22]Luis M. Rocha:
On the feasibility of dynamical analysis of network models of biochemical regulation. Bioinform. 38(14): 3674-3675 (2022) - [e10]Rosa María Benito, Chantal Cherifi, Hocine Cherifi, Esteban Moro, Luis M. Rocha, Marta Sales-Pardo:
Complex Networks & Their Applications X - Volume 1, Proceedings of the Tenth International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2021, Madrid, Spain, November 30 - December 2, 2021. Studies in Computational Intelligence 1015, Springer 2022, ISBN 978-3-030-93408-8 [contents] - [e9]Rosa María Benito, Chantal Cherifi, Hocine Cherifi, Esteban Moro, Luis M. Rocha, Marta Sales-Pardo:
Complex Networks & Their Applications X - Volume 2, Proceedings of the Tenth International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2021, Madrid, Spain, November 30 - December 2, 2021. Studies in Computational Intelligence 1016, Springer 2022, ISBN 978-3-030-93413-2 [contents] - [i27]Ian B. Wood, Rion Brattig Correia, Wendy R. Miller, Luis M. Rocha:
Small Cohort of Epilepsy Patients Showed Increased Activity on Facebook before Sudden Unexpected Death. CoRR abs/2201.07552 (2022) - [i26]Felipe Xavier Costa, Rion Brattig Correia, Luis M. Rocha:
The distance backbone of directed networks. CoRR abs/2209.01181 (2022) - 2021
- [j21]Tiago Simas, Rion Brattig Correia, Luis M. Rocha:
The distance backbone of complex networks. J. Complex Networks 9(6) (2021) - [j20]Hocine Cherifi, Luis M. Rocha:
Introduction to the special issue on COMPLEX NETWORKS 2019. Netw. Sci. 9(S1): S1-S3 (2021) - [j19]Aehong Min, Wendy Miller, Luis M. Rocha, Katy Börner, Rion Brattig Correia, Patrick C. Shih:
Just In Time: Challenges and Opportunities of First Aid Care Information Sharing for Supporting Epileptic Seizure Response. Proc. ACM Hum. Comput. Interact. 5(CSCW1): 113:1-113:24 (2021) - [e8]Rosa M. Benito, Chantal Cherifi, Hocine Cherifi, Esteban Moro, Luis Mateus Rocha, Marta Sales-Pardo:
Complex Networks & Their Applications IX - Volume 1, Proceedings of the Ninth International Conference on Complex Networks and Their Applications, COMPLEX NETWORKS 2020, 1-3 December 2020, Madrid, Spain. Studies in Computational Intelligence 943, Springer 2021, ISBN 978-3-030-65346-0 [contents] - [e7]Rosa M. Benito, Chantal Cherifi, Hocine Cherifi, Esteban Moro, Luis Mateus Rocha, Marta Sales-Pardo:
Complex Networks & Their Applications IX - Volume 2, Proceedings of the Ninth International Conference on Complex Networks and Their Applications, COMPLEX NETWORKS 2020, 1-3 December 2020, Madrid, Spain. Studies in Computational Intelligence 944, Springer 2021, ISBN 978-3-030-65350-7 [contents] - [i25]Tiago Simas, Rion Brattig Correia, Luis M. Rocha:
The distance backbone of complex networks. CoRR abs/2103.04668 (2021) - 2020
- [j18]Hocine Cherifi, Luis M. Rocha, Stanley Wasserman:
Introduction to the special issue on COMPLEX NETWORKS 2018. Netw. Sci. 8(S1): S1-S3 (2020) - [e6]Hocine Cherifi, Sabrina Gaito, José Fernendo Mendes, Esteban Moro, Luis Mateus Rocha:
Complex Networks and Their Applications VIII - Volume 1 Proceedings of the Eighth International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2019, Lisbon, Portugal, December 10-12, 2019. Studies in Computational Intelligence 881, Springer 2020, ISBN 978-3-030-36686-5 [contents] - [e5]Hocine Cherifi, Sabrina Gaito, José Fernendo Mendes, Esteban Moro, Luis Mateus Rocha:
Complex Networks and Their Applications VIII - Volume 2 Proceedings of the Eighth International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2019, Lisbon, Portugal, December 10-12, 2019. Studies in Computational Intelligence 882, Springer 2020, ISBN 978-3-030-36682-7 [contents] - [i24]Rion Brattig Correia, Ian B. Wood, Johan Bollen, Luis M. Rocha:
Mining social media data for biomedical signals and health-related behavior. CoRR abs/2001.10285 (2020)
2010 – 2019
- 2019
- [e4]Luca Maria Aiello, Chantal Cherifi, Hocine Cherifi, Renaud Lambiotte, Pietro Lió, Luis M. Rocha:
Complex Networks and Their Applications VII - Volume 1 Proceedings The 7th International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2018, Cambridge, UK, December 11-13, 2018. Studies in Computational Intelligence 812, Springer 2019, ISBN 978-3-030-05410-6 [contents] - [e3]Luca Maria Aiello, Chantal Cherifi, Hocine Cherifi, Renaud Lambiotte, Pietro Lió, Luis M. Rocha:
Complex Networks and Their Applications VII - Volume 2 Proceedings The 7th International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2018. Studies in Computational Intelligence 813, Springer 2019, ISBN 978-3-030-05413-7 [contents] - 2018
- [i23]Rion Brattig Correia, Luciana Pereira de Araújo, Mauro Marcelo Mattos, Luis M. Rocha:
City-wide Analysis of Electronic Health Records Reveals Gender and Age Biases in the Administration of Known Drug-Drug Interactions. CoRR abs/1803.03571 (2018) - [i22]Rion Brattig Correia, Alexander J. Gates, Xuan Wang, Luis M. Rocha:
CANA: A python package for quantifying control and canalization in Boolean Networks. CoRR abs/1803.04774 (2018) - 2017
- [i21]Ian B. Wood, Pedro Leal Varela, Johan Bollen, Luis M. Rocha, Joana Gonçalves-Sá:
Human Sexual Cycles are Driven by Culture and Match Collective Moods. CoRR abs/1707.03959 (2017) - 2016
- [c26]Rion Brattig Correia, Lang Li, Luis M. Rocha:
Monitoring Potential Drug Interactions and Reactions via Network Analysis of Instagram User Timelines. PSB 2016: 492-503 - 2015
- [j17]Tiago Simas, Luis M. Rocha:
Distance closures on complex networks. Netw. Sci. 3(2): 227-268 (2015) - [i20]Giovanni Luca Ciampaglia, Prashant Shiralkar, Luis M. Rocha, Johan Bollen, Filippo Menczer, Alessandro Flammini:
Computational fact checking from knowledge networks. CoRR abs/1501.03471 (2015) - [i19]Artemy Kolchinsky, Alexander J. Gates, Luis M. Rocha:
Modularity and the Spread of Perturbations in Complex Dynamical Systems. CoRR abs/1509.04386 (2015) - [i18]Alexander J. Gates, Luis M. Rocha:
Control of complex networks requires both structure and dynamics. CoRR abs/1509.08409 (2015) - [i17]Rion Brattig Correia, Lang Li, Luis M. Rocha:
Monitoring Potential Drug Interactions and Reactions via Network Analysis of Instagram User Timelines. CoRR abs/1510.01006 (2015) - 2014
- [j16]Artemy Kolchinsky, Martijn P. van den Heuvel, Alessandra Griffa, Patric Hagmann, Luis M. Rocha, Olaf Sporns, Joaquín Goñi:
Multi-scale integration and predictability in resting state brain activity. Frontiers Neuroinformatics 8: 66 (2014) - [c25]Alexander J. Gates, Luis M. Rocha:
Structure and Dynamics Affect the Controlability of Complex Systems: A Preliminary Study. ALIFE 2014: 429-430 - [c24]Matthew R. Francisco, Ian B. Wood, Selma Sabanovic, Luis M. Rocha:
Designing a Minimalist Socially Aware Robotic Agent for the Home. ALIFE 2014: 876-883 - [i16]Matthew R. Francisco, Ian B. Wood, Selma Sabanovic, Luis M. Rocha:
Designing a minimalist socially aware robotic agent for the home. CoRR abs/1406.6873 (2014) - [i15]Artemy Kolchinsky, Anália Lourenço, Heng-Yi Wu, Lang Li, Luis M. Rocha:
Extraction of Pharmacokinetic Evidence of Drug-drug Interactions from the Literature. CoRR abs/1412.0744 (2014) - 2013
- [j15]Heng-Yi Wu, Shreyas D. Karnik, Abhinita Subhadarshini, Zhiping Wang, Santosh Philips, Xu Han, Chienwei Chiang, Lei Liu, Malaz Boustani, Luis M. Rocha, Sara K. Quinney, David A. Flockhart, Lang Li:
An integrated pharmacokinetics ontology and corpus for text mining. BMC Bioinform. 14: 35 (2013) - [c23]Artemy Kolchinsky, Anália Lourenço, Lang Li, Luis M. Rocha:
Evaluation of Linear Classifiers on Articles Containing Pharmacokinetic Evidence of Drug-Drug Interactions. Pacific Symposium on Biocomputing 2013: 409-420 - [i14]Manuel Marques-Pita, Luis M. Rocha:
Canalization and control in automata networks: body segmentation in Drosophila melanogaster. CoRR abs/1301.5831 (2013) - [i13]Tiago Simas, Luis M. Rocha:
Distance Closures on Complex Networks. CoRR abs/1312.2459 (2013) - 2012
- [j14]Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M. Rocha:
Correction: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature. BMC Bioinform. 13: 180 (2012) - [c22]Tiago Simas, Luis M. Rocha:
Semi-metric Networks for Recommender Systems. Web Intelligence/IAT Workshops 2012: 175-179 - [i12]Tiago Simas, Luis M. Rocha:
Semi-metric networks for recommender systems. CoRR abs/1209.1719 (2012) - [i11]Artemy Kolchinsky, Anália Lourenço, Lang Li, Luis M. Rocha:
Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions. CoRR abs/1210.0734 (2012) - 2011
- [j13]Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M. Rocha:
A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature. BMC Bioinform. 12(S-8): S12 (2011) - [j12]Martin Krallinger, Miguel Vazquez, Florian Leitner, David Salgado, Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi, Robert Leaman, Graciela Gonzalez, Sérgio Matos, Sun Kim, W. John Wilbur, Luis M. Rocha, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafal Rak, Keith Noto, Charles Elkan, Zhiyong Lu:
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text. BMC Bioinform. 12(S-8): S3 (2011) - [j11]Alaa Abi-Haidar, Luis M. Rocha:
Collective classification of textual documents by guided self-organization in T-Cell cross-regulation dynamics. Evol. Intell. 4(2): 69-80 (2011) - [c21]Artemy Kolchinsky, Luis M. Rocha:
Prediction and modularity in dynamical systems. ECAL 2011: 423-430 - [c20]Manuel Marques-Pita, Luis M. Rocha:
Schema redescription in cellular automata: Revisiting emergence in complex systems. ALIFE 2011: 233-240 - [i10]Alaa Abi-Haidar, Luis M. Rocha:
Collective Classification of Textual Documents by Guided Self-Organization in T-Cell Cross-Regulation Dynamics. CoRR abs/1102.1027 (2011) - [i9]Manuel Marques-Pita, Luis M. Rocha:
Schema Redescription in Cellular Automata: Revisiting Emergence in Complex Systems. CoRR abs/1102.1691 (2011) - [i8]Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M. Rocha:
A Linear Classifier Based on Entity Recognition Tools and a Statistical Approach to Method Extraction in the Protein-Protein Interaction Literature. CoRR abs/1103.4090 (2011) - [i7]Artemy Kolchinsky, Luis M. Rocha:
Prediction and Modularity in Dynamical Systems. CoRR abs/1106.3703 (2011) - 2010
- [j10]Anália Lourenço, Rafael Carreira, Daniel Glez-Peña, José Ramon Méndez, Sónia Carneiro, Luis Mateus Rocha, Fernando Díaz, Eugénio C. Ferreira, Isabel Rocha, Florentino Fdez-Riverola, Miguel Rocha:
BioDR: Semantic indexing networks for biomedical document retrieval. Expert Syst. Appl. 37(4): 3444-3453 (2010) - [j9]Artemy Kolchinsky, Alaa Abi-Haidar, Jasleen Kaur, Ahmed Abdeen Hamed, Luis Mateus Rocha:
Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features. IEEE ACM Trans. Comput. Biol. Bioinform. 7(3): 400-411 (2010) - [c19]Alaa Abi-Haidar, Luis M. Rocha:
Collective Classification of Biomedical Articles using T-Cell Cross-regulation. ALIFE 2010: 706-716 - [c18]Alaa Abi-Haidar, Luis Mateus Rocha:
Biomedical Article Classification Using an Agent-Based Model of T-Cell Cross-Regulation. ICARIS 2010: 237-249
2000 – 2009
- 2009
- [j8]Zhiping Wang, Seongho Kim, Sara K. Quinney, Yingying Guo, Stephen D. Hall, Luis M. Rocha, Lang Li:
Literature mining on pharmacokinetics numerical data: A feasibility study. J. Biomed. Informatics 42(4): 726-735 (2009) - [c17]Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Rafael Carreira, Luis M. Rocha, Daniel Glez-Peña, José Ramon Méndez, Florentino Fdez-Riverola, Fernando Díaz, Isabel Rocha, Miguel Rocha:
Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. IWANN (2) 2009: 954-963 - [e2]Luís Seabra Lopes, Nuno Lau, Pedro Mariano, Luis M. Rocha:
Progress in Artificial Intelligence, 14th Portuguese Conference on Artificial Intelligence, EPIA 2009, Aveiro, Portugal, October 12-15, 2009. Proceedings. Lecture Notes in Computer Science 5816, Springer 2009, ISBN 978-3-642-04685-8 [contents] - 2008
- [c16]Alaa Abi-Haidar, Luis M. Rocha:
Adaptive Spam Detection Inspired by the Immune System. ALIFE 2008: 1-8 - [c15]Manuel Marques-Pita, Luis M. Rocha:
Conceptual Structure in Cellular Automata - The Density Classification Task. ALIFE 2008: 390-397 - [c14]Alaa Abi-Haidar, Luis M. Rocha:
Adaptive Spam Detection Inspired by a Cross-Regulation Model of Immune Dynamics: A Study of Concept Drift. ICARIS 2008: 36-47 - [c13]Manuel Marques-Pita, Melanie Mitchell, Luis M. Rocha:
The Role of Conceptual Structure in Designing Cellular Automata to Perform Collective Computation. UC 2008: 146-163 - [i6]Alaa Abi-Haidar, Luis M. Rocha:
Adaptive Spam Detection Inspired by a Cross-Regulation Model of Immune Dynamics: A Study of Concept Drift. CoRR abs/0812.1014 (2008) - [i5]Alaa Abi-Haidar, Jasleen Kaur, Ana Gabriela Maguitman, Predrag Radivojac, Andreas Rechtsteiner, Karin Verspoor, Zhiping Wang, Luis M. Rocha:
Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks. CoRR abs/0812.1029 (2008) - 2007
- [j7]Chien-Feng Huang, Jasleen Kaur, Ana Gabriela Maguitman, Luis M. Rocha:
Agent-Based Model of Genotype Editing. Evol. Comput. 15(3): 253-289 (2007) - [c12]Luis M. Rocha, Jasleen Kaur:
Genotype Editing and the Evolution of Regulation and Memory. ECAL 2007: 63-73 - [e1]Fernando Almeida e Costa, Luis Mateus Rocha, Ernesto Costa, Inman Harvey, António Coutinho:
Advances in Artificial Life, 9th European Conference, ECAL 2007, Lisbon, Portugal, September 10-14, 2007, Proceedings. Lecture Notes in Computer Science 4648, Springer 2007, ISBN 978-3-540-74912-7 [contents] - 2006
- [c11]Ana Gabriela Maguitman, Andreas Rechtsteiner, Karin Verspoor, Charlie E. M. Strauss, Luis M. Rocha:
Large-Scale Testing of Bibliome Informatics Using Pfam Protein Families. Pacific Symposium on Biocomputing 2006: 76-87 - 2005
- [j6]Fernando Almeida e Costa, Luis Mateus Rocha:
Introduction to the Special Issue: Embodied and Situated Cognition. Artif. Life 11(1-2): 5-11 (2005) - [j5]Luis Mateus Rocha, Wim Hordijk:
Material Representations: From the Genetic Code to the Evolution of Cellular Automata. Artif. Life 11(1-2): 189-214 (2005) - [j4]Karin Verspoor, Judith D. Cohn, Cliff A. Joslyn, Susan M. Mniszewski, Andreas Rechtsteiner, Luis M. Rocha, Tiago Simas:
Protein annotation as term categorization in the gene ontology using word proximity networks. BMC Bioinform. 6(S-1) (2005) - [c10]Chien-Feng Huang, Luis M. Rocha:
Tracking extrema in dynamic environments using a coevolutionary agent-based model of genotype edition. GECCO 2005: 545-552 - [c9]Luis M. Rocha, Tiago Simas, Andreas Rechtsteiner, Mariella Di Giacomo, Richard Luce:
MyLibrary@LANL: Proximity and Semi-metric Networks for a Collaborative and Recommender Web Service. Web Intelligence 2005: 565-571 - 2004
- [j3]César A. Osuna-Gómez, Luis M. Rocha, Manuel Romero Salcedo, Luis Villa-Vargas, Leonid Sheremetov, Olivia Niño:
Using the APRI model for evaluating the intention in collaborative learning environments. Inteligencia Artif. 8(24): 109-119 (2004) - [j2]Manuel Romero Salcedo, César A. Osuna-Gómez, Leonid Sheremetov, Luis Villa-Vargas, Carlos Morales, Luis M. Rocha, Manuel Chi:
Study and analysis of workspace awareness in CDebate: a groupware application for collaborative debates. Interact. Comput. 16(4): 657-681 (2004) - [c8]Chien-Feng Huang, Luis M. Rocha:
A Systematic Study of Genetic Algorithms with Genotype Editing. GECCO (1) 2004: 1233-1245 - [c7]Leonid Sheremetov, Luis M. Rocha, Juan Guerra, Jorge Martínez Muñoz:
Optimization Algorithm for Dynamic Multi-Agent Job Routing. BASYS 2004: 183-192 - 2003
- [c6]Chien-Feng Huang, Luis M. Rocha:
Exploration of RNA editing and design of robust genetic algorithms. IEEE Congress on Evolutionary Computation 2003: 2799-2806 - [i4]Luis M. Rocha:
Semi-metric Behavior in Document Networks and its Application to Recommendation Systems. CoRR cs.IR/0309013 (2003) - [i3]Chien-Feng Huang, Luis M. Rocha:
Exploration of RNA Editing and Design of Robust Genetic Algorithms. CoRR cs.NE/0309012 (2003) - 2002
- [c5]Luis M. Rocha:
Combination of evidence in recommendation systems characterized by distance functions. FUZZ-IEEE 2002: 203-208 - 2000
- [c4]Johan Bollen, Luis M. Rocha:
An Adaptive Systems Approach to the Implementation and Evaluation of Digital Library Recommendation Systems. ECDL 2000: 356-359 - [i2]Luis M. Rocha:
Syntactic Autonomy: Why There is no Autonomy without Symbols and How Self-Organization Might Evolve Them. CoRR cs.AI/0002009 (2000) - [i1]Luis M. Rocha, Johan Bollen:
Biologically Motivated Distributed Designs for Adaptive Knowledge Management. CoRR cs.IR/0002010 (2000)
1990 – 1999
- 1999
- [c3]Johan Bollen, Herbert Van de Sompel, Luis Mateus Rocha:
Mining Associative Relations from Website Logs and their Application to Context-Dependent Retrieval Using Spreading Activation. WOWS 1999: 59-66 - [c2]Luis Mateus Rocha:
TalkMine and the Adaptive Recommendation Project. ACM DL 1999: 242-243 - 1998
- [j1]Cliff A. Joslyn, Luis Mateus Rocha:
Towards a Formal Taxonomy of Hybrid Uncertainty Representations. Inf. Sci. 110(3-4): 255-277 (1998) - 1995
- [c1]Luis Mateus Rocha:
Contextual Genetic Algorithms: Evolving Developmental Rules. ECAL 1995: 368-382
Coauthor Index
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