Search dblp for Publications

export results for "stream:streams/series/mimb:"

 download as .bib file

@incollection{DBLP:series/mimb/Alanis-LobatoS20,
  author    = {Gregorio Alanis{-}Lobato and
               Martin H. Schaefer},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Generation and Interpretation of Context-Specific Human Protein-Protein
               Interaction Networks with {HIPPIE}},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {135--144},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_11},
  doi       = {10.1007/978-1-4939-9873-9\_11},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/Alanis-LobatoS20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/AlcarazHL20,
  author    = {Nicolas Alcaraz and
               Anne Hartebrodt and
               Markus List},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {De Novo Pathway Enrichment with KeyPathwayMiner},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {181--199},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_14},
  doi       = {10.1007/978-1-4939-9873-9\_14},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/AlcarazHL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/BiedermannHSS20,
  author    = {Sonja Biedermann and
               Monika Henzinger and
               Christian Schulz and
               Bernhard Schuster},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Vienna Graph Clustering},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {215--231},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_16},
  doi       = {10.1007/978-1-4939-9873-9\_16},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/BiedermannHSS20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/ByskaJFKP20,
  author    = {Jan Byska and
               Adam Jurc{\'{\i}}k and
               Katar{\'{\i}}na Furmanov{\'{a}} and
               Barbora Kozl{\'{\i}}kov{\'{a}} and
               Jan J. Palecek},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Visual Analysis of Protein-Protein Interaction Docking Models Using
               {COZOID} Tool},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {81--94},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_7},
  doi       = {10.1007/978-1-4939-9873-9\_7},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/ByskaJFKP20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/GueudreBPW20,
  author    = {Thomas Gueudr{\'{e}} and
               Carlo Baldassi and
               Andrea Pagnani and
               Martin Weigt},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Predicting Interacting Protein Pairs by Coevolutionary Paralog Matching},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {57--65},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_5},
  doi       = {10.1007/978-1-4939-9873-9\_5},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/GueudreBPW20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/HalakouGK20,
  author    = {Farideh Halakou and
               Attila G{\"{u}}rsoy and
               Ozlem Keskin},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Embedding Alternative Conformations of Proteins in Protein-Protein
               Interaction Networks},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {113--124},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_9},
  doi       = {10.1007/978-1-4939-9873-9\_9},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/HalakouGK20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/HawLOHW20,
  author    = {Robin Haw and
               Fred Loney and
               Edison Ong and
               Yongqun He and
               Guanming Wu},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Perform Pathway Enrichment Analysis Using ReactomeFIViz},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {165--179},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_13},
  doi       = {10.1007/978-1-4939-9873-9\_13},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/HawLOHW20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/Hayes20,
  author    = {Wayne B. Hayes},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {An Introductory Guide to Aligning Networks Using SANA, the Simulated
               Annealing Network Aligner},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {263--284},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_18},
  doi       = {10.1007/978-1-4939-9873-9\_18},
  timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/Hayes20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/Ivanov20,
  author    = {Andrey A. Ivanov},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Explore Protein-Protein Interactions for Cancer Target Discovery Using
               the OncoPPi Portal},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {145--164},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_12},
  doi       = {10.1007/978-1-4939-9873-9\_12},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/Ivanov20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/JingZWX20,
  author    = {Xiaoyang Jing and
               Hong Zeng and
               Sheng Wang and
               Jinbo Xu},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {A Web-Based Protocol for Interprotein Contact Prediction by Deep Learning},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {67--80},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_6},
  doi       = {10.1007/978-1-4939-9873-9\_6},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/JingZWX20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/KochPHO20,
  author    = {Ina Koch and
               Oliver Philipp and
               Andrea Hamann and
               Heinz D. Osiewacz},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Reconstruction of Protein-Protein Interaction Networks Using Homology-Based
               Search: Application to the Autophagy Pathway of Aging in \emph{Podospora
               anserina}},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {45--55},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_4},
  doi       = {10.1007/978-1-4939-9873-9\_4},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/KochPHO20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/LiI20,
  author    = {Yiwei Li and
               Lucian Ilie},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Predicting Protein-Protein Interactions Using {SPRINT}},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {1--11},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_1},
  doi       = {10.1007/978-1-4939-9873-9\_1},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/LiI20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/ListAB20,
  author    = {Markus List and
               Nicolas Alcaraz and
               Richa Batra},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {De Novo Pathway-Based Classification of Breast Cancer Subtypes},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {201--213},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_15},
  doi       = {10.1007/978-1-4939-9873-9\_15},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/ListAB20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/PastrelloKJ20,
  author    = {Chiara Pastrello and
               Max Kotlyar and
               Igor Jurisica},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Informed Use of Protein-Protein Interaction Data: {A} Focus on the
               Integrated Interactions Database {(IID)}},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {125--134},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_10},
  doi       = {10.1007/978-1-4939-9873-9\_10},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/PastrelloKJ20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/RajaNKSRTS20,
  author    = {Kalpana Raja and
               Jeyakumar Natarajan and
               Finn Kuusisto and
               John W. Steill and
               Ian Ross and
               James A. Thomson and
               Ron M. Stewart},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Automated Extraction and Visualization of Protein-Protein Interaction
               Networks and Beyond: {A} Text-Mining Protocol},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {13--34},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_2},
  doi       = {10.1007/978-1-4939-9873-9\_2},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/RajaNKSRTS20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/ReL20,
  author    = {Angela Re and
               Paola Lecca},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {On TD-WGcluster: Theoretical Foundations and Guidelines for the User},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {233--262},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_17},
  doi       = {10.1007/978-1-4939-9873-9\_17},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/ReL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/ShimL20,
  author    = {Jung Eun Shim and
               Insuk Lee},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Construction of Functional Protein Networks Using Domain Profile Associations},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {35--44},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_3},
  doi       = {10.1007/978-1-4939-9873-9\_3},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/ShimL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/mimb/TerashiCK20,
  author    = {Genki Terashi and
               Charles Christoffer and
               Daisuke Kihara},
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes},
  booktitle = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  pages     = {95--112},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9\_8},
  doi       = {10.1007/978-1-4939-9873-9\_8},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/series/mimb/TerashiCK20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:series/mimb/2074,
  editor    = {Stefan Canzar and
               Francisca Rojas Ringeling},
  title     = {Protein-Protein Interaction Networks, Methods and Protocols},
  series    = {Methods in Molecular Biology},
  volume    = {2074},
  publisher = {Springer},
  year      = {2020},
  url       = {https://doi.org/10.1007/978-1-4939-9873-9},
  doi       = {10.1007/978-1-4939-9873-9},
  isbn      = {978-1-4939-9872-2},
  timestamp = {Wed, 26 Feb 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/series/mimb/2074.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
a service of Schloss Dagstuhl - Leibniz Center for Informatics