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@article{DBLP:journals/biodb/AbugessaisaSSKH16,
author = {Imad Abugessaisa and
Hisashi Shimoji and
Serkan Sahin and
Atsushi Kondo and
Jayson Harshbarger and
Marina Lizio and
Yoshihide Hayashizaki and
Piero Carninci and
Alistair R. R. Forrest and
Takeya Kasukawa and
Hideya Kawaji},
title = {{FANTOM5} transcriptome catalog of cellular states based on Semantic
MediaWiki},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw105},
doi = {10.1093/DATABASE/BAW105},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AbugessaisaSSKH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AgarwalKJRS16,
author = {Rahul Agarwal and
Binayak Kumar and
Msk Jayadev and
Dhwani Raghav and
Ashutosh Singh},
title = {CoReCG: a comprehensive database of genes associated with colon-rectal
cancer},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw059},
doi = {10.1093/DATABASE/BAW059},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/AgarwalKJRS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AhmedZD16,
author = {Zeeshan Ahmed and
Saman Zeeshan and
Thomas Dandekar},
title = {Mining biomedical images towards valuable information retrieval in
biomedical and life sciences},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw118},
doi = {10.1093/DATABASE/BAW118},
timestamp = {Fri, 28 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AhmedZD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AhmedZD16a,
author = {Zeeshan Ahmed and
Saman Zeeshan and
Thomas Dandekar},
title = {Mining biomedical images towards valuable information retrieval in
biomedical and life sciences},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw134},
doi = {10.1093/DATABASE/BAW134},
timestamp = {Fri, 28 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AhmedZD16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AkenABCCFFBGHHK16,
author = {Bronwen L. Aken and
Sarah C. Ayling and
Daniel Barrell and
Laura Clarke and
Valery Curwen and
Susan Fairley and
Julio Fernandez{-}Banet and
Konstantinos Billis and
Carlos Garc{\'{\i}}a{-}Gir{\'{o}}n and
Thibaut Hourlier and
Kevin Lee Howe and
Andreas K{\"{a}}h{\"{a}}ri and
Felix Kokocinski and
Fergal J. Martin and
Daniel N. Murphy and
Rishi Nag and
Magali Ruffier and
Michael Schuster and
Y. Amy Tang and
Jan Vogel and
Simon White and
Amonida Zadissa and
Paul Flicek and
Stephen M. J. Searle},
title = {The Ensembl gene annotation system},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw093},
doi = {10.1093/DATABASE/BAW093},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AkenABCCFFBGHHK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AkhondiPAHBHMK16,
author = {Saber A. Akhondi and
Ewoud Pons and
Zubair Afzal and
Herman van Haagen and
Benedikt F. H. Becker and
Kristina M. Hettne and
Erik M. van Mulligen and
Jan A. Kors},
title = {Chemical entity recognition in patents by combining dictionary-based
and statistical approaches},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw061},
doi = {10.1093/DATABASE/BAW061},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AkhondiPAHBHMK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AlamCLZ16,
author = {Firoj Alam and
Anna Corazza and
Alberto Lavelli and
Roberto Zanoli},
title = {A knowledge-poor approach to chemical-disease relation extraction},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw071},
doi = {10.1093/DATABASE/BAW071},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AlamCLZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AmmariGMN16,
author = {Mais G. Ammari and
Cathy R. Gresham and
Fiona M. McCarthy and
Bindu Nanduri},
title = {{HPIDB} 2.0: a curated database for host-pathogen interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw103},
doi = {10.1093/DATABASE/BAW103},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AmmariGMN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AnkenbrandWBFB16,
author = {Markus J. Ankenbrand and
Lorenz Weber and
Dirk Becker and
Frank F{\"{o}}rster and
Felix Bemm},
title = {TBro: visualization and management of \emph{de novo} transcriptomes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw146},
doi = {10.1093/DATABASE/BAW146},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/AnkenbrandWBFB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ArendJSSWL16,
author = {Daniel Arend and
Astrid Junker and
Uwe Scholz and
Danuta Sch{\"{u}}ler and
Juliane Wylie and
Matthias Lange},
title = {{PGP} repository: a plant phenomics and genomics data publication
infrastructure},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw033},
doi = {10.1093/DATABASE/BAW033},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/ArendJSSWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AyedHEMR16,
author = {Rayda Ben Ayed and
Hanen Ben Hassen and
Karim Ennouri and
Riadh Ben Marzoug and
Ahmed Rebai},
title = {{OGDD} (\emph{Olive Genetic Diversity Database}): a microsatellite
markers' genotypes database of worldwide olive trees for cultivar
identification and virgin olive oil traceability},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav090},
doi = {10.1093/DATABASE/BAV090},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/AyedHEMR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Baa-PuyouletPFH16,
author = {Patrice Baa{-}Puyoulet and
Nicolas Parisot and
G{\'{e}}rard Febvay and
Jaime Huerta{-}Cepas and
Augusto F. Vellozo and
Toni Gabald{\'{o}}n and
Federica Calevro and
Hubert Charles and
Stefano Colella},
title = {ArthropodaCyc: a CycADS powered collection of BioCyc databases to
analyse and compare metabolism of arthropods},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw081},
doi = {10.1093/DATABASE/BAW081},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/Baa-PuyouletPFH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BasseBMR16,
author = {Marie Jeanne Basse and
St{\'{e}}phane Betzi and
Xavier Morelli and
Philippe Roche},
title = {2P2Idb v2: update of a structural database dedicated to orthosteric
modulation of protein-protein interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw007},
doi = {10.1093/DATABASE/BAW007},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BasseBMR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Batista-Navarro16,
author = {Riza Theresa Batista{-}Navarro and
Jacob Carter and
Sophia Ananiadou},
title = {Argo: enabling the development of bespoke workflows and services for
disease annotation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw066},
doi = {10.1093/DATABASE/BAW066},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/Batista-Navarro16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BaulinYKSR16,
author = {Eugene Baulin and
Victor Yacovlev and
Denis Khachko and
Sergei A. Spirin and
Mikhail Roytberg},
title = {{URS} DataBase: universe of {RNA} structures and their motifs},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw085},
doi = {10.1093/DATABASE/BAW085},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BaulinYKSR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BeberMH16,
author = {Moritz Emanuel Beber and
Georgi Muskhelishvili and
Marc{-}Thorsten H{\"{u}}tt},
title = {Effect of database drift on network topology and enrichment analyses:
a case study for RegulonDB},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw003},
doi = {10.1093/DATABASE/BAW003},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/BeberMH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BhawnaBG16,
author = {Bhawna V. S. Bonthala and
M. N. V. Prasad Gajula},
title = {PvTFDB: a \emph{Phaseolus vulgaris} transcription factors database
for expediting functional genomics in legumes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw114},
doi = {10.1093/DATABASE/BAW114},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BhawnaBG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BrandesOL16,
author = {Nadav Brandes and
Dan Ofer and
Michal Linial},
title = {{ASAP:} a machine learning framework for local protein properties},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw133},
doi = {10.1093/DATABASE/BAW133},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BrandesOL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BravoLSGF16,
author = {{\`{A}}lex Bravo and
Tong Shu Li and
Andrew I. Su and
Benjamin M. Good and
Laura I. Furlong},
title = {Combining machine learning, crowdsourcing and expert knowledge to
detect chemical-induced diseases in text},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw094},
doi = {10.1093/DATABASE/BAW094},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/BravoLSGF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BreuzaPEFMTBBR16,
author = {Lionel Breuza and
Sylvain Poux and
Anne Estreicher and
Maria Livia Famiglietti and
Michele Magrane and
Michael Tognolli and
Alan J. Bridge and
Delphine Baratin and
Nicole Redaschi},
title = {The UniProtKB guide to the human proteome},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav120},
doi = {10.1093/DATABASE/BAV120},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/BreuzaPEFMTBBR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Burgstaller-Muehlbacher16,
author = {Sebastian Burgstaller{-}Muehlbacher and
Andra Waagmeester and
Elvira Mitraka and
Julia Turner and
Tim E. Putman and
Justin Leong and
Chinmay Naik and
Paul Pavlidis and
Lynn M. Schriml and
Benjamin M. Good and
Andrew I. Su},
title = {Wikidata as a semantic framework for the Gene Wiki initiative},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw015},
doi = {10.1093/DATABASE/BAW015},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/Burgstaller-Muehlbacher16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BurnsDWH16,
author = {Gully A. P. C. Burns and
Pradeep Dasigi and
Anita de Waard and
Eduard H. Hovy},
title = {Automated detection of discourse segment and experimental types from
the text of cancer pathway results sections},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw122},
doi = {10.1093/DATABASE/BAW122},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BurnsDWH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BursteinasBBARR16,
author = {Borisas Bursteinas and
Ramona Britto and
Benoit Bely and
Andrea H. Auchincloss and
Catherine Rivoire and
Nicole Redaschi and
Claire O'Donovan and
Maria Jesus Martin},
title = {Minimizing proteome redundancy in the UniProt Knowledgebase},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw139},
doi = {10.1093/DATABASE/BAW139},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BursteinasBBARR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/CallahanAASFPSV16,
author = {Alison Callahan and
Saminda Abeyruwan and
Hassan Al{-}Ali and
Kunie Sakurai and
Adam R. Ferguson and
Phillip G. Popovich and
Nigam H. Shah and
Ubbo Visser and
John L. Bixby and
Vance P. Lemmon},
title = {RegenBase: a knowledge base of spinal cord injury biology for translational
research},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw040},
doi = {10.1093/DATABASE/BAW040},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/CallahanAASFPSV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChangCC16,
author = {Che{-}Wei Chang and
Chai{-}Wei Chou and
Darby Tien{-}Hao Chang},
title = {CCProf: exploring conformational change profile of proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw029},
doi = {10.1093/DATABASE/BAW029},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChangCC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChangCSCH16,
author = {Yung{-}Chun Chang and
Chun{-}Han Chu and
Yu{-}Chen Su and
Chien Chin Chen and
Wen{-}Lian Hsu},
title = {{PIPE:} a protein-protein interaction passage extraction module for
BioCreative challenge},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw101},
doi = {10.1093/DATABASE/BAW101},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChangCSCH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChenAZDWLZLZ16,
author = {Lei Chen and
Peng Ai and
Jinfeng Zhang and
Qiming Deng and
Shiquan Wang and
Shuangcheng Li and
Jun Zhu and
Ping Li and
Ai{-}ping Zheng},
title = {RSIADB, a collective resource for genome and transcriptome analyses
in \emph{Rhizoctonia solani} {AG1} {IA}},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw031},
doi = {10.1093/DATABASE/BAW031},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChenAZDWLZLZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChenJXLHXCCLXT16,
author = {Chong Chen and
Yi Jiang and
Chenyang Xu and
Xinting Liu and
Lin Hu and
Yanbao Xiang and
Qingshuang Chen and
Denghui Chen and
Huanzheng Li and
Xueqin Xu and
Shaohua Tang},
title = {Skeleton Genetics: a comprehensive database for genes and mutations
related to genetic skeletal disorders},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw127},
doi = {10.1093/DATABASE/BAW127},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChenJXLHXCCLXT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChenTM16,
author = {Yi{-}An Chen and
Lokesh P. Tripathi and
Kenji Mizuguchi},
title = {An integrative data analysis platform for gene set analysis and knowledge
discovery in a data warehouse framework},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw009},
doi = {10.1093/DATABASE/BAW009},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChenTM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChoiCKKNL16,
author = {Wonjun Choi and
Chan{-}Hun Choi and
Young{-}Ran Kim and
Seon{-}Jong Kim and
Chang{-}Su Na and
Hyunju Lee},
title = {HerDing: herb recommendation system to treat diseases using genes
and chemicals},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw011},
doi = {10.1093/DATABASE/BAW011},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/ChoiCKKNL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChoiLBZV16,
author = {Miji Choi and
Haibin Liu and
William A. Baumgartner Jr. and
Justin Zobel and
Karin Verspoor},
title = {Coreference resolution improves extraction of Biological Expression
Language statements from texts},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw076},
doi = {10.1093/DATABASE/BAW076},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/ChoiLBZV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/CromarZXSLSP16,
author = {Graham L. Cromar and
Anthony Zhao and
Xuejian Xiong and
Lakshmipuram S. Swapna and
Noeleen Loughran and
Hongyan Song and
John Parkinson},
title = {PhyloPro2.0: a database for the dynamic exploration of phylogenetically
conserved proteins and their domain architectures across the Eukarya},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw013},
doi = {10.1093/DATABASE/BAW013},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/CromarZXSLSP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DaiSJS16,
author = {Hong{-}Jie Dai and
Onkar Singh and
Jitendra Jonnagaddala and
Emily Chia{-}Yu Su},
title = {{NTTMUNSW} BioC modules for recognizing and normalizing species and
gene/protein mentions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw111},
doi = {10.1093/DATABASE/BAW111},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DaiSJS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DaiSLHJJRCMSSH16,
author = {Hong{-}Jie Dai and
Chu{-}Hsien Su and
Po{-}Ting Lai and
Ming{-}Siang Huang and
Jitendra Jonnagaddala and
Toni Rose Jue and
Shruti Rao and
Hui{-}Jou Chou and
Marija Milacic and
Onkar Singh and
Syed Abdul Shabbir and
Wen{-}Lian Hsu},
title = {{MET} network in PubMed: a text-mined network visualization and curation
system},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw090},
doi = {10.1093/DATABASE/BAW090},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DaiSLHJJRCMSSH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DePriestFSHMLH16,
author = {Adam D. DePriest and
Michael V. Fiandalo and
Simon Schlanger and
Frederike Heemers and
James L. Mohler and
Song Liu and
Hannelore V. Heemers},
title = {Regulators of Androgen Action Resource: a one-stop shop for the comprehensive
study of androgen receptor action},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav125},
doi = {10.1093/DATABASE/BAV125},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DePriestFSHMLH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DenisenkoHTOSBG16,
author = {Elena Denisenko and
Daniel Ho and
Ousman Tamgue and
Mumin Ozturk and
Harukazu Suzuki and
Frank Brombacher and
Reto Guler and
Sebastian Schmeier},
title = {IRNdb: the database of immunologically relevant non-coding RNAs},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw138},
doi = {10.1093/DATABASE/BAW138},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DenisenkoHTOSBG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DraizenSMTLP16,
author = {Eli J. Draizen and
Alexey K. Shaytan and
Leonardo Mari{\~{n}}o{-}Ram{\'{\i}}rez and
Paul B. Talbert and
David Landsman and
Anna R. Panchenko},
title = {HistoneDB 2.0: a histone database with variants - an integrated resource
to explore histones and their variants},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw014},
doi = {10.1093/DATABASE/BAW014},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DraizenSMTLP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DrogeBSCBBBBCDD16,
author = {Gabriele Dr{\"{o}}ge and
Katharine Barker and
Ole Seberg and
Jonathan Coddington and
Erica E. Benson and
Walter G. Berendsohn and
Boyke Bunk and
Carol Butler and
E. Margaret Casey and
John Deck and
Markus D{\"{o}}ring and
Paul Flemons and
Birgit Gemeinholzer and
Anton G{\"{u}}ntsch and
Tom Hollowell and
Patricia Kelbert and
Ivaylo Kostadinov and
Renzo Kottmann and
Rita T. Lawlor and
Chris Lyal and
Jacqueline Mackenzie{-}Dodds and
Christopher Meyer and
Daniel Mulcahy and
Sara Y. Nussbeck and
{\'{E}}amonn {\'{O}} Tuama and
Thomas Orrell and
Gitte Petersen and
Tim Robertson and
Carola S{\"{o}}hngen and
Jamie Whitacre and
John Wieczorek and
Pelin Yilmaz and
Holger Zetzsche and
Yong Zhang and
Xin Zhou},
title = {The Global Genome Biodiversity Network {(GGBN)} Data Standard specification},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw125},
doi = {10.1093/DATABASE/BAW125},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DrogeBSCBBBBCDD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DrogeT16,
author = {Gabriele Dr{\"{o}}ge and
Till T{\"{o}}pfer},
title = {The Corvids Literature Database - 500 years of ornithological research
from a crow's perspective},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav122},
doi = {10.1093/DATABASE/BAV122},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DrogeT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DruceHMSXMO16,
author = {Megan Druce and
Chantal Hulo and
Patrick Masson and
Paula Sommer and
Ioannis Xenarios and
Philippe Le Mercier and
Tulio de Oliveira},
title = {Improving {HIV} proteome annotation: new features of BioAfrica {HIV}
Proteomics Resource},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw045},
doi = {10.1093/DATABASE/BAW045},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/DruceHMSXMO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DugasNMDSBV16,
author = {Martin Dugas and
Philipp Neuhaus and
Alexandra Meidt and
Justin Doods and
Michael Storck and
Philipp Bruland and
Julian Varghese},
title = {Portal of medical data models: information infrastructure for medical
research and healthcare},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav121},
doi = {10.1093/DATABASE/BAV121},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DugasNMDSBV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EdwardsBM16,
author = {Jeremy D. Edwards and
A. M. Baldo and
Lukas A. Mueller},
title = {Ricebase: a breeding and genetics platform for rice, integrating individual
molecular markers, pedigrees and whole-genome-based data},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw107},
doi = {10.1093/DATABASE/BAW107},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/EdwardsBM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EngelWBPSC16,
author = {Stacia R. Engel and
Shuai Weng and
Gail Binkley and
Kelley M. Paskov and
Giltae Song and
J. Michael Cherry},
title = {From one to many: expanding the \emph{Saccharomyces cerevisiae} reference
genome panel},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw020},
doi = {10.1093/DATABASE/BAW020},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/EngelWBPSC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/FeuermannGMLT16,
author = {Marc Feuermann and
Pascale Gaudet and
Huaiyu Mi and
Suzanna E. Lewis and
Paul D. Thomas},
title = {Large-scale inference of gene function through phylogenetic annotation
of Gene Ontology terms: case study of the apoptosis and autophagy
cellular processes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw155},
doi = {10.1093/DATABASE/BAW155},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/FeuermannGMLT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/FishilevichZKSO16,
author = {Simon Fishilevich and
Shahar Zimmerman and
Asher Kohn and
Tsippi Iny Stein and
Tsviya Olender and
Eugene Kolker and
Marilyn Safran and
Doron Lancet},
title = {Genic insights from integrated human proteomics in GeneCards},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw030},
doi = {10.1093/DATABASE/BAW030},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/FishilevichZKSO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/FluckMAKKRCHSHP16,
author = {Juliane Fluck and
Sumit Madan and
Sam Ansari and
Alpha Tom Kodamullil and
Reagon Karki and
Majid Rastegar{-}Mojarad and
Natalie L. Catlett and
William Hayes and
Justyna Szostak and
Julia Hoeng and
Manuel C. Peitsch},
title = {Training and evaluation corpora for the extraction of causal relationships
encoded in biological expression language {(BEL)}},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw113},
doi = {10.1093/DATABASE/BAW113},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/FluckMAKKRCHSHP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GhattaorayaDGMS16,
author = {Gurpreet S. Ghattaoraya and
Yenal Dundar and
Faviel F. Gonzalez{-}Galarza and
Maria Helena Thomaz Maia and
Eduardo Jos{\'{e}} Melo dos Santos and
Andrea Luciana Soares da Silva and
Antony McCabe and
Derek Middleton and
Ana Alfirevic and
Rumona Dickson and
Andrew R. Jones},
title = {A web resource for mining {HLA} associations with adverse drug reactions:
{HLA-ADR}},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw069},
doi = {10.1093/DATABASE/BAW069},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GhattaorayaDGMS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GiudiceSFP16,
author = {Girolamo Giudice and
F{\'{a}}tima S{\'{a}}nchez{-}Cabo and
Carlos Torroja Fungairino and
Enrique Lara Pezzi},
title = {ATtRACT - a database of RNA-binding proteins and associated motifs},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw035},
doi = {10.1093/DATABASE/BAW035},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GiudiceSFP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Gosink16,
author = {Mark Gosink},
title = {ToxReporter: viewing the genome through the eyes of a toxicologist},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw141},
doi = {10.1093/DATABASE/BAW141},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Gosink16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GuQZ16,
author = {Jinghang Gu and
Longhua Qian and
Guodong Zhou},
title = {Chemical-induced disease relation extraction with various linguistic
features},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw042},
doi = {10.1093/DATABASE/BAW042},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GuQZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GuralnickZWLBR16,
author = {Robert P. Guralnick and
Paula F. Zermoglio and
John Wieczorek and
Raphael LaFrance and
David Bloom and
Laura Russell},
title = {The importance of digitized biocollections as a source of trait data
and a new VertNet resource},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw158},
doi = {10.1093/DATABASE/BAW158},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/GuralnickZWLBR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GurjarPGM16,
author = {Anoop Kishor Singh Gurjar and
Abhijeet Singh Panwar and
Rajinder Gupta and
Shrikant S. Mantri},
title = {PmiRExAt: plant miRNA expression atlas database and web applications},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw060},
doi = {10.1093/DATABASE/BAW060},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/GurjarPGM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HanQZ16,
author = {Na Han and
Yujun Qiang and
Wen Zhang},
title = {ANItools web: a web tool for fast genome comparison within multiple
bacterial strains},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw084},
doi = {10.1093/DATABASE/BAW084},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HanQZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HanZZTLZD16,
author = {Min{-}Jin Han and
Qiu{-}Zhong Zhou and
Hua{-}Hao Zhang and
Xiaoling Tong and
Cheng Lu and
Ze Zhang and
Fangyin Dai},
title = {iMITEdb: the genome-wide landscape of miniature inverted-repeat transposable
elements in insects},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw148},
doi = {10.1093/DATABASE/BAW148},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HanZZTLZD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HaoWLYLZC16,
author = {Yajing Hao and
Wei Wu and
Hui Li and
Jiao Yuan and
Jianjun Luo and
Yi Zhao and
Runsheng Chen},
title = {NPInter v3.0: an upgraded database of noncoding RNA-associated interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw057},
doi = {10.1093/DATABASE/BAW057},
timestamp = {Fri, 03 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/HaoWLYLZC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HardtBRKHKH16,
author = {Christopher Hardt and
Moritz Emanuel Beber and
Axel Rasche and
Atanas Kamburov and
Dennie G. A. J. Hebels and
Jos C. S. Kleinjans and
Ralf Herwig},
title = {ToxDB: pathway-level interpretation of drug-treatment data},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw052},
doi = {10.1093/DATABASE/BAW052},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/HardtBRKHKH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HaymanLSWPNTPDS16,
author = {G. Thomas Hayman and
Stanley J. F. Laulederkind and
Jennifer R. Smith and
Shur{-}Jen Wang and
Victoria Petri and
Rajni Nigam and
Marek Tutaj and
Jeff de Pons and
Melinda R. Dwinell and
Mary Shimoyama},
title = {The Disease Portals, disease-gene annotation and the {RGD} disease
ontology at the Rat Genome Database},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw034},
doi = {10.1093/DATABASE/BAW034},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HaymanLSWPNTPDS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HerreroMBFGPVSA16,
author = {Javier Herrero and
Matthieu Muffato and
Kathryn Beal and
Stephen Fitzgerald and
Leo Gordon and
Miguel Pignatelli and
Albert J. Vilella and
Stephen M. J. Searle and
M. Ridwan Amode and
Simon Brent and
William Spooner and
Eugene Kulesha and
Andrew D. Yates and
Paul Flicek},
title = {Ensembl comparative genomics resources},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav096},
doi = {10.1093/DATABASE/BAV096},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HerreroMBFGPVSA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HerreroMBFGPVSA16a,
author = {Javier Herrero and
Matthieu Muffato and
Kathryn Beal and
Stephen Fitzgerald and
Leo Gordon and
Miguel Pignatelli and
Albert J. Vilella and
Stephen M. J. Searle and
M. Ridwan Amode and
Simon Brent and
William Spooner and
Eugene Kulesha and
Andrew D. Yates and
Paul Flicek},
title = {Ensembl comparative genomics resources},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw053},
doi = {10.1093/DATABASE/BAW053},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HerreroMBFGPVSA16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HillDBMRB16,
author = {David P. Hill and
Peter D'Eustachio and
Tanya Z. Berardini and
Christopher J. Mungall and
Nikolai Renedo and
Judith A. Blake},
title = {Modeling biochemical pathways in the gene ontology},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw126},
doi = {10.1093/DATABASE/BAW126},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HillDBMRB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HinardBRBAG16,
author = {Val{\'{e}}rie Hinard and
Aurore Britan and
J. S. Rougier and
Amos Bairoch and
Hugues Abriel and
Pascale Gaudet},
title = {{ICEPO:} the ion channel electrophysiology ontology},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw017},
doi = {10.1093/DATABASE/BAW017},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/HinardBRBAG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HirschmanFBKDC16,
author = {Lynette Hirschman and
Kar{\"{e}}n Fort and
St{\'{e}}phanie Bou{\'{e}} and
Nikos Kyrpides and
Rezarta Islamaj Dogan and
Kevin Bretonnel Cohen},
title = {Crowdsourcing and curation: perspectives from biology and natural
language processing},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw115},
doi = {10.1093/DATABASE/BAW115},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HirschmanFBKDC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HongSCDMSHGNHLR16,
author = {Eurie L. Hong and
Cricket A. Sloan and
Esther T. Chan and
Jean M. Davidson and
Venkat S. Malladi and
J. Seth Strattan and
Benjamin C. Hitz and
Idan Gabdank and
Aditi K. Narayanan and
Marcus Ho and
Brian T. Lee and
Laurence D. Rowe and
Timothy R. Dreszer and
Greg R. Roe and
Nikhil R. Podduturi and
Forrest Tanaka and
Jason A. Hilton and
J. Michael Cherry},
title = {Principles of metadata organization at the {ENCODE} data coordination
center},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw001},
doi = {10.1093/DATABASE/BAW001},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HongSCDMSHGNHLR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HoopenABPBCGKLM16,
author = {Petra ten Hoopen and
Clara Amid and
Pier Luigi Buttigieg and
Evangelos Pafilis and
Panos Bravakos and
Ana Cerde{\~{n}}o{-}T{\'{a}}rraga and
Richard Gibson and
Tim Kahlke and
Aglaia Legaki and
Kada Narayana Murthy and
Gabriella Papastefanou and
Emiliano Pereira and
Marc Rossello and
Ana Luisa Toribio and
Guy Cochrane},
title = {Value, but high costs in post-deposition data curation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav126},
doi = {10.1093/DATABASE/BAV126},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HoopenABPBCGKLM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HuangL16,
author = {Chung{-}Chi Huang and
Zhiyong Lu},
title = {Discovering biomedical semantic relations in PubMed queries for information
retrieval and database curation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw025},
doi = {10.1093/DATABASE/BAW025},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HuangL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Ibarra-Arellano16,
author = {Miguel A. Ibarra{-}Arellano and
Adri{\'{a}}n I. Campos{-}Gonz{\'{a}}lez and
Luis G. Trevi{\~{n}}o{-}Quintanilla and
Andreas Tauch and
Julio A. Freyre{-}Gonz{\'{a}}lez},
title = {Abasy Atlas: a comprehensive inventory of systems, global network
properties and systems-level elements across bacteria},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw089},
doi = {10.1093/DATABASE/BAW089},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Ibarra-Arellano16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/IenasescuLAVRCV16,
author = {Hans Ienasescu and
Kang Li and
Robin Andersson and
Morana Vitezic and
Sarah Rennie and
Yun Chen and
Kristoffer Vitting{-}Seerup and
Emil Lagoni and
Mette Boyd and
Jette Bornholdt and
Michiel J. L. de Hoon and
Hideya Kawaji and
Timo Lassmann and
The Fantom Consortium and
Yoshihide Hayashizaki and
Alistair R. R. Forrest and
Piero Carninci and
Albin Sandelin},
title = {On-the-fly selection of cell-specific enhancers, genes, miRNAs and
proteins across the human body using SlideBase},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw144},
doi = {10.1093/DATABASE/BAW144},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/IenasescuLAVRCV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/IfeonuSTSDFKWLT16,
author = {Olukemi O. Ifeonu and
Raphael Simon and
Sharon M. Tennant and
Abhineet S. Sheoran and
Maria C. Daly and
Victor Felix and
Jessica C. Kissinger and
Giovanni Widmer and
Myron M. Levine and
Saul Tzipori and
Joana C. Silva},
title = {\emph{Cryptosporidium hominis} gene catalog: a resource for the selection
of novel \emph{Cryptosporidium} vaccine candidates},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw137},
doi = {10.1093/DATABASE/BAW137},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/IfeonuSTSDFKWLT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JonnagaddalaJCD16,
author = {Jitendra Jonnagaddala and
Toni Rose Jue and
Nai{-}Wen Chang and
Hong{-}Jie Dai},
title = {Improving the dictionary lookup approach for disease normalization
using enhanced dictionary and query expansion},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw112},
doi = {10.1093/DATABASE/BAW112},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JonnagaddalaJCD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JorgePRFPL16,
author = {Paula Jorge and
Mart{\'{\i}}n P{\'{e}}rez{-}P{\'{e}}rez and
Gael P{\'{e}}rez Rodr{\'{\i}}guez and
Florentino Fdez{-}Riverola and
Maria Ol{\'{\i}}via Pereira and
An{\'{a}}lia Louren{\c{c}}o},
title = {Construction of antimicrobial peptide-drug combination networks from
scientific literature based on a semi-automated curation workflow},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw143},
doi = {10.1093/DATABASE/BAW143},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JorgePRFPL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JorqueraOOCSGH16,
author = {Roddy Jorquera and
Rodrigo Ortiz and
Francisco Ossand{\'{o}}n and
Juan Pablo C{\'{a}}rdenas and
Rene Sep{\'{u}}lveda and
Carolina Gonz{\'{a}}lez and
David S. Holmes},
title = {SinEx {DB:} a database for single exon coding sequences in mammalian
genomes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw095},
doi = {10.1093/DATABASE/BAW095},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JorqueraOOCSGH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JungLFYCM16,
author = {Sook Jung and
Taein Lee and
Stephen P. Ficklin and
Jing Yu and
Chun{-}Huai Cheng and
Dorrie Main},
title = {Chado use case: storing genomic, genetic and breeding data of Rosaceae
and Gossypium crops in Chado},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw010},
doi = {10.1093/DATABASE/BAW010},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/JungLFYCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JungLFYCM16a,
author = {Sook Jung and
Taein Lee and
Stephen P. Ficklin and
Jing Yu and
Chun{-}Huai Cheng and
Dorrie Main},
title = {Chado use case: storing genomic, genetic and breeding data of Rosaceae
and Gossypium crops in Chado},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw058},
doi = {10.1093/DATABASE/BAW058},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JungLFYCM16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Karp16,
author = {Peter D. Karp},
title = {How much does curation cost?},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw110},
doi = {10.1093/DATABASE/BAW110},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Karp16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Karp16a,
author = {Peter D. Karp},
title = {Crowd-sourcing and author submission as alternatives to professional
curation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw150},
doi = {10.1093/DATABASE/BAW150},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Karp16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Karp16b,
author = {Peter D. Karp},
title = {Crowd-sourcing and author submission as alternatives to professional
curation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
pages = {baw149},
year = {2016},
url = {https://doi.org/10.1093/database/baw149},
doi = {10.1093/DATABASE/BAW149},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Karp16b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KilicSWBCCTOCME16,
author = {Sefa Kili{\c{c}} and
Dinara M. Sagitova and
Shoshannah Wolfish and
Benoit Bely and
M{\'{e}}lanie Courtot and
Stacy Ciufo and
Tatiana A. Tatusova and
Claire O'Donovan and
Marcus C. Chibucos and
Maria Jesus Martin and
Ivan Erill},
title = {From data repositories to submission portals: rethinking the role
of domain-specific databases in CollecTF},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw055},
doi = {10.1093/DATABASE/BAW055},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KilicSWBCCTOCME16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KimDCCORBCAMSCO16,
author = {Sun Kim and
Rezarta Islamaj Dogan and
Andrew Chatr{-}aryamontri and
Christie S. Chang and
Rose Oughtred and
Jennifer M. Rust and
Riza Batista{-}Navarro and
Jacob Carter and
Sophia Ananiadou and
S{\'{e}}rgio Matos and
Andr{\'{e}} Santos and
David Campos and
Jos{\'{e}} Lu{\'{\i}}s Oliveira and
Onkar Singh and
Jitendra Jonnagaddala and
Hong{-}Jie Dai and
Emily Chia{-}Yu Su and
Yung{-}Chun Chang and
Yu{-}Chen Su and
Chun{-}Han Chu and
Chien Chin Chen and
Wen{-}Lian Hsu and
Yifan Peng and
Cecilia N. Arighi and
Cathy H. Wu and
K. Vijay{-}Shanker and
Ferhat Aydin and
Zehra Melce H{\"{u}}s{\"{u}}nbeyi and
Arzucan {\"{O}}zg{\"{u}}r and
Soo{-}Yong Shin and
Dongseop Kwon and
Kara Dolinski and
Mike Tyers and
W. John Wilbur and
Donald C. Comeau},
title = {BioCreative {V} BioC track overview: collaborative biocurator assistant
task for BioGRID},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw121},
doi = {10.1093/DATABASE/BAW121},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KimDCCORBCAMSCO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KringelumKBLOT16,
author = {Jens Kringelum and
Sonny Kim Kj{\ae}rulff and
S{\o}ren Brunak and
Ole Lund and
Tudor I. Oprea and
Olivier Taboureau},
title = {ChemProt-3.0: a global chemical biology diseases mapping},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav123},
doi = {10.1093/DATABASE/BAV123},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/KringelumKBLOT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KrochmalFFPHZMV16,
author = {Magdalena Krochmal and
Marco Fernandes and
Szymon Filip and
Claudia Pontillo and
Holger Husi and
Jerome Zoidakis and
Harald Mischak and
Antonia Vlahou and
Joachim Jankowski},
title = {PeptiCKDdb - peptide- and protein-centric database for the investigation
of genesis and progression of chronic kidney disease},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw128},
doi = {10.1093/DATABASE/BAW128},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KrochmalFFPHZMV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KuanYCTLCYHYN16,
author = {Chee Sian Kuan and
Su Mei Yew and
Chai Ling Chan and
Yue Fen Toh and
Kok Wei Lee and
Wei{-}Hien Cheong and
Wai{-}Yan Yee and
Chee{-}Choong Hoh and
Soon{-}Joo Yap and
Kee{-}Peng Ng},
title = {DemaDb: an integrated dematiaceous fungal genomes database},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw008},
doi = {10.1093/DATABASE/BAW008},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KuanYCTLCYHYN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KuangDHSK16,
author = {Xingyan Kuang and
Andi Dhroso and
Jing Ginger Han and
Chi{-}Ren Shyu and
Dmitry Korkin},
title = {{DOMMINO} 2.0: integrating structurally resolved protein-, RNA-, and
DNA-mediated macromolecular interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav114},
doi = {10.1093/DATABASE/BAV114},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KuangDHSK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KumarC16,
author = {Sonu Kumar and
Piotr Cieplak},
title = {CaspNeuroD: a knowledgebase of predicted caspase cleavage sites in
human proteins related to neurodegenerative diseases},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw142},
doi = {10.1093/DATABASE/BAW142},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KumarC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KunzLNCD16,
author = {Meik Kunz and
Chunguang Liang and
Santosh Nilla and
Alexander Cecil and
Thomas Dandekar},
title = {The drug-minded protein interaction database (DrumPID) for efficient
target analysis and drug development},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw041},
doi = {10.1093/DATABASE/BAW041},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KunzLNCD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KuzmenkovKCGV16,
author = {Alexey I. Kuzmenkov and
Nikolay A. Krylov and
Anton O. Chugunov and
Eugene V. Grishin and
Alexander A. Vassilevski},
title = {Kalium: a database of potassium channel toxins from scorpion venom},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw056},
doi = {10.1093/DATABASE/BAW056},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KuzmenkovKCGV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LaiLHHT16,
author = {Po{-}Ting Lai and
Yu{-}Yan Lo and
Ming{-}Siang Huang and
Yu{-}Cheng Hsiao and
Richard Tzong{-}Han Tsai},
title = {BelSmile: a biomedical semantic role labeling approach for extracting
biological expression language from text},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw064},
doi = {10.1093/DATABASE/BAW064},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LaiLHHT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeTDHC16,
author = {Hoang{-}Quynh Le and
Mai{-}Vu Tran and
Thanh Hai Dang and
Quang{-}Thuy Ha and
Nigel Collier},
title = {Sieve-based coreference resolution enhances semi-supervised learning
model for chemical-induced disease relation extraction},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw102},
doi = {10.1093/DATABASE/BAW102},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LeTDHC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeTDHC16a,
author = {Hoang{-}Quynh Le and
Mai{-}Vu Tran and
Thanh Hai Dang and
Quang{-}Thuy Ha and
Nigel Collier},
title = {Sieve-based coreference resolution enhances semi-supervised learning
model for chemical-induced disease relation extraction},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw131},
doi = {10.1093/DATABASE/BAW131},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LeTDHC16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeamanWZL16,
author = {Robert Leaman and
Chih{-}Hsuan Wei and
Cherry Zou and
Zhiyong Lu},
title = {Mining chemical patents with an ensemble of open systems},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw065},
doi = {10.1093/DATABASE/BAW065},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LeamanWZL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeeHK16,
author = {Hsin{-}Chun Lee and
Yi{-}Yu Hsu and
Hung{-}Yu Kao},
title = {AuDis: an automatic CRF-enhanced disease normalization in biomedical
text},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw091},
doi = {10.1093/DATABASE/BAW091},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LeeHK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeeLPKKCTK16,
author = {Kyubum Lee and
Sunwon Lee and
Sungjoon Park and
Sunkyu Kim and
Suhkyung Kim and
Kwanghun Choi and
Aik Choon Tan and
Jaewoo Kang},
title = {{BRONCO:} Biomedical entity Relation ONcology COrpus for extracting
gene-variant-disease-drug relations},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw043},
doi = {10.1093/DATABASE/BAW043},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LeeLPKKCTK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeonCAR16,
author = {Eduardo Andr{\'{e}}s Le{\'{o}}n and
Ildefonso Cases and
Aida Arcas and
Ana M. Rojas},
title = {DDRprot: a database of {DNA} damage response-related proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw123},
doi = {10.1093/DATABASE/BAW123},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LeonCAR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiABS16,
author = {Chen Li and
Steve G. Androulakis and
Ashley M. Buckle and
Jiangning Song},
title = {KinetochoreDB: a comprehensive online resource for the kinetochore
and its related proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw019},
doi = {10.1093/DATABASE/BAW019},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiABS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiBFGS16,
author = {Tong Shu Li and
{\`{A}}lex Bravo and
Laura I. Furlong and
Benjamin M. Good and
Andrew I. Su},
title = {A crowdsourcing workflow for extracting chemical-induced disease relations
from free text},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw051},
doi = {10.1093/DATABASE/BAW051},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LiBFGS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiNALSB16,
author = {Chen Li and
Jeremy Nagel and
Steve G. Androulakis and
Christopher J. Lupton and
Jiangning Song and
Ashley M. Buckle},
title = {PolyQ 2.0: an improved version of PolyQ, a database of human polyglutamine
proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw050},
doi = {10.1093/DATABASE/BAW050},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LiNALSB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiNASB16,
author = {Chen Li and
Jeremy Nagel and
Steve G. Androulakis and
Jiangning Song and
Ashley M. Buckle},
title = {PolyQ 2.0: an improved version of PolyQ, a database of human polyglutamine
proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw021},
doi = {10.1093/DATABASE/BAW021},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiNASB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiSJSWLDMWL16,
author = {Jiao Li and
Yueping Sun and
Robin J. Johnson and
Daniela Sciaky and
Chih{-}Hsuan Wei and
Robert Leaman and
Allan Peter Davis and
Carolyn J. Mattingly and
Thomas C. Wiegers and
Zhiyong Lu},
title = {BioCreative {V} {CDR} task corpus: a resource for chemical disease
relation extraction},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw068},
doi = {10.1093/DATABASE/BAW068},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiSJSWLDMWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiTCCWWW16,
author = {Haodi Li and
Buzhou Tang and
Qingcai Chen and
Kai Chen and
Xiaolong Wang and
Baohua Wang and
Zhe Wang},
title = {HITSZ{\_}CDR: an end-to-end chemical and disease relation extraction
system for BioCreative {V}},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw077},
doi = {10.1093/DATABASE/BAW077},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiTCCWWW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiZZYDGG16,
author = {Shu{-}Fen Li and
Guo{-}Jun Zhang and
Xue{-}Jin Zhang and
Jin{-}Hong Yuan and
Chuan{-}Liang Deng and
Lian{-}Feng Gu and
Wujun Gao},
title = {DPTEdb, an integrative database of transposable elements in dioecious
plants},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw078},
doi = {10.1093/DATABASE/BAW078},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiZZYDGG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiewAV16,
author = {Yi Jin Liew and
Manuel Aranda and
Christian R. Voolstra},
title = {Reefgenomics.Org - a repository for marine genomics data},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw152},
doi = {10.1093/DATABASE/BAW152},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiewAV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiuWXTWZCLLLLYL16,
author = {Haijun Liu and
Fan Wang and
Yingjie Xiao and
Zonglin Tian and
Weiwei Wen and
Xuehai Zhang and
Xi Chen and
Nannan Liu and
Wenqiang Li and
Lei Liu and
Jie Liu and
Jianbing Yan and
Jianxiao Liu},
title = {{MODEM:} multi-omics data envelopment and mining in maize},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw117},
doi = {10.1093/DATABASE/BAW117},
timestamp = {Mon, 08 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiuWXTWZCLLLLYL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiuYCJWTSLC16,
author = {Wei{-}Ting Liu and
Chia{-}Chun Yang and
Rong{-}Kuen Chen and
Woei{-}Shyuan Jwo and
Chih{-}Wen Wu and
Wen{-}Yen Ting and
Dah{-}Pyng Shung and
Chun{-}Chi Liu and
Jeremy J. W. Chen},
title = {RiceATM: a platform for identifying the association between rice agronomic
traits and miRNA expression},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw151},
doi = {10.1093/DATABASE/BAW151},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LiuYCJWTSLC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LoweOS16,
author = {Daniel M. Lowe and
Noel M. O'Boyle and
Roger A. Sayle},
title = {Efficient chemical-disease identification and relationship extraction
using Wikipedia to improve recall},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw039},
doi = {10.1093/DATABASE/BAW039},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LoweOS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MadanHSASHPF16,
author = {Sumit Madan and
Sven Hodapp and
Philipp Senger and
Sam Ansari and
Justyna Szostak and
Julia Hoeng and
Manuel C. Peitsch and
Juliane Fluck},
title = {The {BEL} information extraction workflow {(BELIEF):} evaluation in
the BioCreative {V} {BEL} and {IAT} track},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw136},
doi = {10.1093/DATABASE/BAW136},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MadanHSASHPF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ManterKTD16,
author = {Daniel K. Manter and
Matthew Korsa and
Caleb Tebbe and
Jorge A. Delgado},
title = {myPhyloDB: a local web server for the storage and analysis of metagenomic
data},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw037},
doi = {10.1093/DATABASE/BAW037},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ManterKTD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MarencoWMOTBLZL16,
author = {Luis N. Marenco and
Rixin Wang and
Robert A. McDougal and
Tsviya Olender and
Michal Twik and
Elspeth A. Bruford and
Xinyi Liu and
Jian Zhang and
Doron Lancet and
Gordon M. Shepherd and
Chiquito J. Crasto},
title = {ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory
receptor-odorant interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw132},
doi = {10.1093/DATABASE/BAW132},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/MarencoWMOTBLZL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MatosCPSMCO16,
author = {S{\'{e}}rgio Matos and
David Campos and
Renato P. Pinho and
Raquel M. Silva and
Matthew E. Mort and
David N. Cooper and
Jos{\'{e}} Lu{\'{\i}}s Oliveira},
title = {Mining clinical attributes of genomic variants through assisted literature
curation in Egas},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw096},
doi = {10.1093/DATABASE/BAW096},
timestamp = {Thu, 02 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/MatosCPSMCO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MazzoccoLMSRP16,
author = {Giovanni Mazzocco and
Michal Lazniewski and
Piotr Migdal and
Teresa Szczepinska and
Jan P. Radomski and
Dariusz Plewczynski},
title = {3DFlu: database of sequence and structural variability of the influenza
hemagglutinin at population scale},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw130},
doi = {10.1093/DATABASE/BAW130},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MazzoccoLMSRP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/McQuiltonGRTLMS16,
author = {Peter McQuilton and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
Philippe Rocca{-}Serra and
Milo Thurston and
Allyson L. Lister and
Eamonn Maguire and
Susanna{-}Assunta Sansone},
title = {BioSharing: curated and crowd-sourced metadata standards, databases
and data policies in the life sciences},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw075},
doi = {10.1093/DATABASE/BAW075},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/McQuiltonGRTLMS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MishraK16,
author = {Subodh Kumar Mishra and
Amit Kumar},
title = {{NALDB:} nucleic acid ligand database for small molecules targeting
nucleic acid},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw002},
doi = {10.1093/DATABASE/BAW002},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MishraK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MonzonRFP16,
author = {Alexander Miguel Monzon and
Cristian Oscar Rohr and
Mar{\'{\i}}a Silvina Fornasari and
Gustavo D. Parisi},
title = {CoDNaS 2.0: a comprehensive database of protein conformational diversity
in the native state},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw038},
doi = {10.1093/DATABASE/BAW038},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MonzonRFP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MoosavinasabPSR16,
author = {Soheil Moosavinasab and
Jeremy Patterson and
Robert Strouse and
Majid Rastegar{-}Mojarad and
Kelly Regan and
Philip R. O. Payne and
Yungui Huang and
Simon M. Lin},
title = {'RE: fine drugs': an interactive dashboard to access drug repurposing
opportunities},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw083},
doi = {10.1093/DATABASE/BAW083},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MoosavinasabPSR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MoralesDMMBH16,
author = {Mayrolin Garc{\'{\i}}a Morales and
Barbara D. Denno and
Douglass R. Miller and
Gary L. Miller and
Yair Ben{-}Dov and
Nate B. Hardy},
title = {ScaleNet: a literature-based model of scale insect biology and systematics},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav118},
doi = {10.1093/DATABASE/BAV118},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MoralesDMMBH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MottinGPMCGR16,
author = {Luc Mottin and
Julien Gobeill and
Emilie Pasche and
Pierre{-}Andr{\'{e}} Michel and
Isabelle Cusin and
Pascale Gaudet and
Patrick Ruch},
title = {neXtA\({}_{\mbox{5}}\): accelerating annotation of articles via automated
approaches in neXtProt},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw098},
doi = {10.1093/DATABASE/BAW098},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/MottinGPMCGR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NagpurePPRSSSSK16,
author = {Naresh Sahebrao Nagpure and
Ajey Kumar Pathak and
Rameshwar Pati and
Iliyas Rashid and
Jyoti Sharma and
Shri Prakash Singh and
Mahender Singh and
Uttam Kumar Sarkar and
Basdeo Kushwaha and
Ravindra Kumar and
S. Murali},
title = {Fish Karyome version 2.1: a chromosome database of fishes and other
aquatic organisms},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw012},
doi = {10.1093/DATABASE/BAW012},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NagpurePPRSSSSK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NakagawaT16,
author = {So Nakagawa and
Mahoko Ueda Takahashi},
title = {gEVE: a genome-based endogenous viral element database provides comprehensive
viral protein-coding sequences in mammalian genomes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw087},
doi = {10.1093/DATABASE/BAW087},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NakagawaT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NguyenHWLL16,
author = {Van{-}Nui Nguyen and
Kai{-}Yao Huang and
Julia Tzu{-}Ya Weng and
K. Robert Lai and
Tzong{-}Yi Lee},
title = {UbiNet: an online resource for exploring the functional associations
and regulatory networks of protein ubiquitylation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw054},
doi = {10.1093/DATABASE/BAW054},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NguyenHWLL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PafilisBFPSAJ16,
author = {Evangelos Pafilis and
Pier Luigi Buttigieg and
Barbra Ferrell and
Emiliano Pereira and
Julia Schnetzer and
Christos Arvanitidis and
Lars Juhl Jensen},
title = {{EXTRACT:} interactive extraction of environment metadata and term
suggestion for metagenomic sample annotation},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw005},
doi = {10.1093/DATABASE/BAW005},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PafilisBFPSAJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ParkKYYKHJSLC16,
author = {Yu Rang Park and
Jae{-}Jung Kim and
Young Jo Yoon and
Young{-}Kwang Yoon and
Ha Yeong Koo and
Young Mi Hong and
Gi Young Jang and
Soo{-}Yong Shin and
Jong{-}Keuk Lee},
title = {Establishment of Kawasaki disease database based on metadata standard},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw109},
doi = {10.1093/DATABASE/BAW109},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ParkKYYKHJSLC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PelletierWEKGKM16,
author = {Dennis J. Pelletier and
Thomas C. Wiegers and
Ahmed Enayetallah and
C. Kibbey and
Mark Gosink and
P. Koza{-}Taylor and
Carolyn J. Mattingly and
M. Lawton},
title = {ToxEvaluator: an integrated computational platform to aid the interpretation
of toxicology study-related findings},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw062},
doi = {10.1093/DATABASE/BAW062},
timestamp = {Mon, 29 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PelletierWEKGKM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PengAWV16,
author = {Yifan Peng and
Cecilia N. Arighi and
Cathy H. Wu and
K. Vijay{-}Shanker},
title = {BioC-compatible full-text passage detection for protein-protein interactions
using extended dependency graph},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw072},
doi = {10.1093/DATABASE/BAW072},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PengAWV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Perez-PerezRRVO16,
author = {Mart{\'{\i}}n P{\'{e}}rez{-}P{\'{e}}rez and
Gael P{\'{e}}rez Rodr{\'{\i}}guez and
Obdulia Rabal and
Miguel Vazquez and
Julen Oyarzabal and
Florentino Fdez{-}Riverola and
Alfonso Valencia and
Martin Krallinger and
An{\'{a}}lia Louren{\c{c}}o},
title = {The Markyt visualisation, prediction and benchmark platform for chemical
and gene entity recognition at BioCreative/CHEMDNER challenge},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw120},
doi = {10.1093/DATABASE/BAW120},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Perez-PerezRRVO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PignatelliVMGWF16,
author = {Miguel Pignatelli and
Albert J. Vilella and
Matthieu Muffato and
Leo Gordon and
Simon White and
Paul Flicek and
Javier Herrero},
title = {ncRNA orthologies in the vertebrate lineage},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav127},
doi = {10.1093/DATABASE/BAV127},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PignatelliVMGWF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PiovesanCAPV16,
author = {Allison Piovesan and
Maria Caracausi and
Francesca Antonaros and
Maria Chiara Pelleri and
Lorenza Vitale},
title = {GeneBase 1.1: a tool to summarize data from {NCBI} gene datasets and
its application to an update of human gene statistics},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw153},
doi = {10.1093/DATABASE/BAW153},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PiovesanCAPV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PonsBAAMK16,
author = {Ewoud Pons and
Benedikt F. H. Becker and
Saber A. Akhondi and
Zubair Afzal and
Erik M. van Mulligen and
Jan A. Kors},
title = {Extraction of chemical-induced diseases using prior knowledge and
textual information},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw046},
doi = {10.1093/DATABASE/BAW046},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PonsBAAMK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PoschPDG16,
author = {Lisa Posch and
Maryam Panahiazar and
Michel Dumontier and
Olivier Gevaert},
title = {Predicting structured metadata from unstructured metadata},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw080},
doi = {10.1093/DATABASE/BAW080},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PoschPDG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PoschPDG16a,
author = {Lisa Posch and
Maryam Panahiazar and
Michel Dumontier and
Olivier Gevaert},
title = {Predicting structured metadata from unstructured metadata},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw097},
doi = {10.1093/DATABASE/BAW097},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PoschPDG16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PrzybylaSABCPMA16,
author = {Piotr Przybyla and
Matthew Shardlow and
Sophie Aubin and
Robert Bossy and
Richard Eckart de Castilho and
Stelios Piperidis and
John McNaught and
Sophia Ananiadou},
title = {Text mining resources for the life sciences},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw145},
doi = {10.1093/DATABASE/BAW145},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/PrzybylaSABCPMA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PutmanBWWSG16,
author = {Tim E. Putman and
Sebastian Burgstaller{-}Muehlbacher and
Andra Waagmeester and
Chunlei Wu and
Andrew I. Su and
Benjamin M. Good},
title = {Centralizing content and distributing labor: a community model for
curating the very long tail of microbial genomes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw028},
doi = {10.1093/DATABASE/BAW028},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/PutmanBWWSG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/QiWWJYWLZDSW16,
author = {Yunfeng Qi and
Dadong Wang and
Daying Wang and
Taicheng Jin and
Liping Yang and
Hui Wu and
Yaoyao Li and
Jing Zhao and
Fengping Du and
Mingxia Song and
Renjun Wang},
title = {{HEDD:} the human epigenetic drug database},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw159},
doi = {10.1093/DATABASE/BAW159},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/QiWWJYWLZDSW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Rastegar-Mojarad16,
author = {Majid Rastegar{-}Mojarad and
Ravikumar Komandur Elayavilli and
Hongfang Liu},
title = {BELTracker: evidence sentence retrieval for {BEL} statements},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw079},
doi = {10.1093/DATABASE/BAW079},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Rastegar-Mojarad16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ReiserBLMSLMVH16,
author = {Leonore Reiser and
Tanya Z. Berardini and
Donghui Li and
Robert J. Muller and
Emily M. Strait and
Qian Li and
Yarik Mezheritsky and
Andrey Vetushko and
Eva Huala},
title = {Sustainable funding for biocuration: The Arabidopsis Information Resource
{(TAIR)} as a case study of a subscription-based funding model},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw018},
doi = {10.1093/DATABASE/BAW018},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ReiserBLMSLMVH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RimetCKKVKFB16,
author = {Fr{\'{e}}d{\'{e}}ric Rimet and
Philippe Chaumeil and
Fran{\c{c}}ois Keck and
Lena{\"{\i}}g Kermarrec and
Valentin Vasselon and
Maria Kahlert and
Alain Franc and
Agn{\`{e}}s Bouchez},
title = {R-Syst::diatom: an open-access and curated barcode database for diatoms
and freshwater monitoring},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw016},
doi = {10.1093/DATABASE/BAW016},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RimetCKKVKFB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RinaldiEMCLMF16,
author = {Fabio Rinaldi and
Tilia Renate Ellendorff and
Sumit Madan and
Simon Clematide and
Adrian Van der Lek and
Heinz{-}Theodor Mevissen and
Juliane Fluck},
title = {BioCreative {V} track 4: a shared task for the extraction of causal
network information using the Biological Expression Language},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw067},
doi = {10.1093/DATABASE/BAW067},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RinaldiEMCLMF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RouillardGFWMMM16,
author = {Andrew D. Rouillard and
Gregory W. Gundersen and
Nicolas F. Fernandez and
Zichen Wang and
Caroline D. Monteiro and
Michael G. McDermott and
Avi Ma'ayan},
title = {The harmonizome: a collection of processed datasets gathered to serve
and mine knowledge about genes and proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw100},
doi = {10.1093/DATABASE/BAW100},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RouillardGFWMMM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SallouDDCLC16,
author = {Olivier Sallou and
Paula D. Duek and
Thomas A. Darde and
Olivier Collin and
Lydie Lane and
Fr{\'{e}}d{\'{e}}ric Chalmel},
title = {PepPSy: a web server to prioritize gene products in experimental and
biocuration workflows},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw070},
doi = {10.1093/DATABASE/BAW070},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SallouDDCLC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Sangrador-Vegas16,
author = {Amaia Sangrador{-}Vegas and
Alex L. Mitchell and
Hsin{-}Yu Chang and
Siew{-}Yit Yong and
Robert D. Finn},
title = {{GO} annotation in InterPro: why stability does not indicate accuracy
in a sea of changing annotations},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw027},
doi = {10.1093/DATABASE/BAW027},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Sangrador-Vegas16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ShenYLW16,
author = {Yi Shen and
Heming Yao and
Ao Li and
Minghui Wang},
title = {CSCdb: a cancer stem cells portal for markers, related genes and functional
information},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw023},
doi = {10.1093/DATABASE/BAW023},
timestamp = {Mon, 16 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ShenYLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ShengJYLLYC16,
author = {Lei Sheng and
Haiyang Jiang and
Hanwei Yan and
Xiaoyu Li and
Yongxiang Lin and
Hui Ye and
Beijiu Cheng},
title = {{MGFD:} the maize gene families database},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw004},
doi = {10.1093/DATABASE/BAW004},
timestamp = {Wed, 02 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/ShengJYLLYC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ShimoyamaSPTKHE16,
author = {Mary Shimoyama and
Jennifer R. Smith and
Jeff de Pons and
Marek Tutaj and
Pawjai Khampang and
Wenzhou Hong and
Christy B. Erbe and
Garth D. Ehrlich and
Lauren O. Bakaletz and
Joseph E. Kerschner},
title = {The Chinchilla Research Resource Database: resource for an otolaryngology
disease model},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw073},
doi = {10.1093/DATABASE/BAW073},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ShimoyamaSPTKHE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ShinKWK16,
author = {Soo{-}Yong Shin and
Sun Kim and
W. John Wilbur and
Dongseop Kwon},
title = {BioC viewer: a web-based tool for displaying and merging annotations
in BioC},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw106},
doi = {10.1093/DATABASE/BAW106},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ShinKWK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ShirotaK16,
author = {Matsuyuki Shirota and
Kengo Kinoshita},
title = {Discrepancies between human DNA, mRNA and protein reference sequences
and their relation to single nucleotide variants in the human population},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw124},
doi = {10.1093/DATABASE/BAW124},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ShirotaK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SimonyanCDFGGGK16,
author = {Vahan Simonyan and
Konstantin Chumakov and
Hayley Dingerdissen and
William J. Faison and
Scott Goldweber and
Anton Golikov and
Naila Gulzar and
Konstantinos Karagiannis and
Phuc Vinh Nguyen Lam and
Thomas Maudru and
Olesja Muravitskaja and
Ekaterina Osipova and
Yang Pan and
Alexey Pschenichnov and
Alexandre Rostovtsev and
Luis V. Santana{-}Quintero and
Krista Smith and
Elaine E. Thompson and
Valery Tkachenko and
John Torcivia{-}Rodriguez and
Alin Voskanian and
Quan Wan and
Jing Wang and
Tsung{-}Jung Wu and
Carolyn Wilson and
Raja Mazumder},
title = {High-performance integrated virtual environment {(HIVE):} a robust
infrastructure for next-generation sequence data analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw022},
doi = {10.1093/DATABASE/BAW022},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SimonyanCDFGGGK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SinghCKSKSDB16,
author = {Deepika Singh and
Hasnahana Chetia and
Debajyoti Kabiraj and
Swagata Sharma and
Anil Kumar and
Pragya Sharma and
Manab Deka and
Utpal Bora},
title = {A comprehensive view of the web-resources related to sericulture},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw086},
doi = {10.1093/DATABASE/BAW086},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/SinghCKSKSDB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SinghalLCLMPXAL16,
author = {Ayush Singhal and
Robert Leaman and
Natalie L. Catlett and
Thomas Lemberger and
Johanna R. McEntyre and
Shawn W. Polson and
Ioannis Xenarios and
Cecilia N. Arighi and
Zhiyong Lu},
title = {Pressing needs of biomedical text mining in biocuration and beyond:
opportunities and challenges},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw161},
doi = {10.1093/DATABASE/BAW161},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SinghalLCLMPXAL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SongBBCDDEHKHNP16,
author = {Giltae Song and
Rama Balakrishnan and
Gail Binkley and
Maria C. Costanzo and
Kyla S. Dalusag and
Janos Demeter and
Stacia R. Engel and
Sage T. Hellerstedt and
Kalpana Karra and
Benjamin C. Hitz and
Robert S. Nash and
Kelley M. Paskov and
Travis K. Sheppard and
Marek S. Skrzypek and
Shuai Weng and
Edith D. Wong and
J. Michael Cherry},
title = {Integration of new alternative reference strain genome sequences into
the \emph{Saccharomyces} genome database},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw074},
doi = {10.1093/DATABASE/BAW074},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SongBBCDDEHKHNP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/StanoBK16,
author = {Matej Stano and
Gabor Beke and
Lubos Klucar},
title = {viruSITE - integrated database for viral genomics},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw162},
doi = {10.1093/DATABASE/BAW162},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/StanoBK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TanTHYWSMRKDKTP16,
author = {Tze King Tan and
Ka Yun Tan and
Ranjeev Hari and
Aini Mohamed Yusoff and
Guat Jah Wong and
Cheuk C. Siow and
Naresh V. R. Mutha and
Mike Rayko and
Aleksey Komissarov and
Pavel Dobrynin and
Ksenia Krasheninnikova and
Gaik Tamazian and
Ian C. Paterson and
Wesley C. Warren and
Warren E. Johnson and
Stephen J. O'Brien and
Siew Woh Choo},
title = {{PGD:} a pangolin genome hub for the research community},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw063},
doi = {10.1093/DATABASE/BAW063},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TanTHYWSMRKDKTP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TianYZYYXS16,
author = {Tian Tian and
Qi You and
Liwei Zhang and
Xin Yi and
Hengyu Yan and
Wenying Xu and
Zhen Su},
title = {SorghumFDB: sorghum functional genomics database with multidimensional
network analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw099},
doi = {10.1093/DATABASE/BAW099},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TianYZYYXS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TomarMMJ16,
author = {Navneet Tomar and
Akhilesh Mishra and
Nirotpal Mrinal and
B. Jayaram},
title = {Onco-Regulon: an integrated database and software suite for site specific
targeting of transcription factors of cancer genes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw116},
doi = {10.1093/DATABASE/BAW116},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TomarMMJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TripathiVCCBHOH16,
author = {Sushil Tripathi and
Steven Vercruysse and
Konika Chawla and
Karen R. Christie and
Judith A. Blake and
Rachael P. Huntley and
Sandra E. Orchard and
Henning Hermjakob and
Liv Thommesen and
Astrid L{\ae}greid and
Martin Kuiper},
title = {Gene regulation knowledge commons: community action takes care of
{DNA} binding transcription factors},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw088},
doi = {10.1093/DATABASE/BAW088},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/TripathiVCCBHOH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TrojahnSVMSFAML16,
author = {Tiago Henrique Trojahn and
Nelson Jos{\'{e}} Freitas da Silveira and
Arthur Henrique Cunha Volpato and
Mayra Mataruco Mioto and
Ana Carolina Buzzo Stefanini and
Adil Bachir Fares and
Jo{\~{a}}o Gustavo da Silva Castro Andrade and
Carolina Masson and
Rossana Ver{\'{o}}nica Mendoza L{\'{o}}pez and
Fabio Daumas Nunes and
Luiz Paulo Kowalski and
Patricia Severino and
Eloiza Helena Tajara},
title = {HNdb: an integrated database of gene and protein information on head
and neck squamous cell carcinoma},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw026},
doi = {10.1093/DATABASE/BAW026},
timestamp = {Sat, 25 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/TrojahnSVMSFAML16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TsaiHL16,
author = {Richard Tzong{-}Han Tsai and
Yu{-}Cheng Hsiao and
Po{-}Ting Lai},
title = {NERChem: adapting NERBio to chemical patents via full-token features
and named entity feature with chemical sub-class composition},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw135},
doi = {10.1093/DATABASE/BAW135},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TsaiHL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/UpadhyayGDSSTIP16,
author = {Pawan Upadhyay and
Nilesh Gardi and
Sanket Desai and
Bikram Sahoo and
Ankita Singh and
Trupti Togar and
Prajish Iyer and
Ratnam Prasad and
Pratik Chandrani and
Sudeep Gupta and
Amit Dutt},
title = {TMC-SNPdb: an Indian germline variant database derived from whole
exome sequences},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw104},
doi = {10.1093/DATABASE/BAW104},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/UpadhyayGDSSTIP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/UzunTSDP16,
author = {Alper Uzun and
Elizabeth W. Triche and
Jessica Schuster and
Andrew Thomas DeWan and
James Padbury},
title = {dbPEC: a comprehensive literature-based database for preeclampsia
related genes and phenotypes},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw006},
doi = {10.1093/DATABASE/BAW006},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/UzunTSDP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangAAABBCCCCCD16,
author = {Qinghua Wang and
Shabbir S. Abdul and
Lara Almeida and
Sophia Ananiadou and
Yalbi I. Balderas{-}Mart{\'{\i}}nez and
Riza Batista{-}Navarro and
David Campos and
Lucy Chilton and
Hui{-}Jou Chou and
Gabriela Contreras and
Laurel Cooper and
Hong{-}Jie Dai and
Barbra Ferrell and
Juliane Fluck and
Socorro Gama{-}Castro and
Nancy George and
Georgios V. Gkoutos and
Afroza Khanam Irin and
Lars Juhl Jensen and
Silvia Jimenez and
Toni Rose Jue and
Ingrid M. Keseler and
Sumit Madan and
S{\'{e}}rgio Matos and
Peter McQuilton and
Marija Milacic and
Matthew E. Mort and
Jeyakumar Natarajan and
Evangelos Pafilis and
Emiliano Pereira and
Shruti Rao and
Fabio Rinaldi and
Karen Rothfels and
David Salgado and
Raquel M. Silva and
Onkar Singh and
Raymund Stefancsik and
Chu{-}Hsien Su and
Suresh Subramani and
Hamsa D. Tadepally and
Loukia Tsaprouni and
Nicole A. Vasilevsky and
Xiaodong Wang and
Andrew Chatr{-}aryamontri and
Stanley J. F. Laulederkind and
Sherri Matis{-}Mitchell and
Johanna R. McEntyre and
Sandra E. Orchard and
Sangya Pundir and
Raul Rodriguez{-}Esteban and
Kimberly Van Auken and
Zhiyong Lu and
Mary L. Schaeffer and
Cathy H. Wu and
Lynette Hirschman and
Cecilia N. Arighi},
title = {Overview of the interactive task in BioCreative {V}},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw119},
doi = {10.1093/DATABASE/BAW119},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangAAABBCCCCCD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WeiCXHG16,
author = {Qikang Wei and
Tao Chen and
Ruifeng Xu and
Yulan He and
Lin Gui},
title = {Disease named entity recognition by combining conditional random fields
and bidirectional recurrent neural networks},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw140},
doi = {10.1093/DATABASE/BAW140},
timestamp = {Thu, 23 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WeiCXHG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WeiPLDMLWL16,
author = {Chih{-}Hsuan Wei and
Yifan Peng and
Robert Leaman and
Allan Peter Davis and
Carolyn J. Mattingly and
Jiao Li and
Thomas C. Wiegers and
Zhiyong Lu},
title = {Assessing the state of the art in biomedical relation extraction:
overview of the BioCreative {V} chemical-disease relation {(CDR)}
task},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw032},
doi = {10.1093/DATABASE/BAW032},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/WeiPLDMLWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuLTC16,
author = {Wei{-}Sheng Wu and
Fu{-}Jou Lai and
Bor{-}Wen Tu and
Darby Tien{-}Hao Chang},
title = {CoopTFD: a repository for predicted yeast cooperative transcription
factor pairs},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw092},
doi = {10.1093/DATABASE/BAW092},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WuLTC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuWLLZJ16,
author = {Jiaxin Wu and
Mengmeng Wu and
Lianshuo Li and
Zhuo Liu and
Wanwen Zeng and
Rui Jiang},
title = {dbWGFP: a database and web server of human whole-genome single nucleotide
variants and their functional predictions},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw024},
doi = {10.1093/DATABASE/BAW024},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WuWLLZJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/XieMZLHDX16,
author = {Xiaowei Xie and
Wenbin Ma and
Songyang Zhou and
Zhenhua Luo and
Junfeng Huang and
Zhiming Dai and
Yuanyan Xiong},
title = {{CCSI:} a database providing chromatin-chromatin spatial interaction
information},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav124},
doi = {10.1093/DATABASE/BAV124},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/XieMZLHDX16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/XuWZWLX16,
author = {Jun Xu and
Yonghui Wu and
Yaoyun Zhang and
Jingqi Wang and
Hee{-}Jin Lee and
Hua Xu},
title = {{CD-REST:} a system for extracting chemical-induced disease relation
in literature},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw036},
doi = {10.1093/DATABASE/BAW036},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/XuWZWLX16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YaoC16,
author = {Po{-}Ju Yao and
Ren{-}Hua Chung},
title = {{GESDB:} a platform of simulation resources for genetic epidemiology
studies},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw082},
doi = {10.1093/DATABASE/BAW082},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YaoC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YunXTZLZ16,
author = {Xiaoxiao Yun and
Lili Xia and
Bixia Tang and
Hui Zhang and
Feifei Li and
Zhihua Zhang},
title = {3CDB: a manually curated database of chromosome conformation capture
data},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw044},
doi = {10.1093/DATABASE/BAW044},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YunXTZLZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YusimYFFMDASFKK16,
author = {Karina Yusim and
Hyejin Yoon and
Brian T. Foley and
Shihai Feng and
Jennifer Macke and
Mira Dimitrijevic and
Werner Abfalterer and
James Szinger and
Will Fischer and
Carla Kuiken and
Bette T. Korber},
title = {Integrated sequence and immunology filovirus database at Los Alamos},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw047},
doi = {10.1093/DATABASE/BAW047},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YusimYFFMDASFKK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZerbinoJJSWLNPR16,
author = {Daniel R. Zerbino and
Nathan Johnson and
Thomas Juettemann and
Daniel Sheppard and
Steven P. Wilder and
Ilias Lavidas and
Michael Nuhn and
Emily Perry and
Quentin Raffaillac{-}Desfosses and
Daniel Sobral and
Damian Keefe and
Stefan Gr{\"{a}}f and
Ikhlak Ahmed and
Rhoda Kinsella and
Bethan Pritchard and
Simon Brent and
M. Ridwan Amode and
Anne Parker and
Stephen J. Trevanion and
Ewan Birney and
Ian Dunham and
Paul Flicek},
title = {Ensembl regulation resources},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/bav119},
doi = {10.1093/DATABASE/BAV119},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZerbinoJJSWLNPR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhangXCWWPX16,
author = {Yaoyun Zhang and
Jun Xu and
Hui Chen and
Jingqi Wang and
Yonghui Wu and
Manu Prakasam and
Hua Xu},
title = {Chemical named entity recognition in patents by domain knowledge and
unsupervised feature learning},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw049},
doi = {10.1093/DATABASE/BAW049},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhangXCWWPX16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhouDCYJH16,
author = {Huiwei Zhou and
Huijie Deng and
Long Chen and
Yunlong Yang and
Chen Jia and
Degen Huang},
title = {Exploiting syntactic and semantics information for chemical-disease
relation extraction},
journal = {Database J. Biol. Databases Curation},
volume = {2016},
year = {2016},
url = {https://doi.org/10.1093/database/baw048},
doi = {10.1093/DATABASE/BAW048},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhouDCYJH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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