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@inproceedings{DBLP:conf/ismb/AlexeyenkoTLS06,
  author       = {Andrey Alexeyenko and
                  Ivica Tamas and
                  Gang Liu and
                  Erik L. L. Sonnhammer},
  title        = {Automatic clustering of orthologs and inparalogs shared by multiple
                  proteomes},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {9--15},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl213},
  doi          = {10.1093/BIOINFORMATICS/BTL213},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/AlexeyenkoTLS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/AntesSL06,
  author       = {Iris Antes and
                  Shirley W. I. Siu and
                  Thomas Lengauer},
  title        = {DynaPred: {A} structure and sequence based method for the prediction
                  of {MHC} class {I} binding peptide sequences and conformations},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {16--24},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl216},
  doi          = {10.1093/BIOINFORMATICS/BTL216},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/AntesSL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Aoki-KinoshitaUMK06,
  author       = {Kiyoko F. Aoki{-}Kinoshita and
                  Nobuhisa Ueda and
                  Hiroshi Mamitsuka and
                  Minoru Kanehisa},
  title        = {ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar
                  chains},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {25--34},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl244},
  doi          = {10.1093/BIOINFORMATICS/BTL244},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/Aoki-KinoshitaUMK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ArmougomMKN06,
  author       = {Fabrice Armougom and
                  S{\'{e}}bastien Moretti and
                  Vladimir Keduas and
                  C{\'{e}}dric Notredame},
  title        = {The iRMSD: a local measure of sequence alignment accuracy using structural
                  information},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {35--39},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl218},
  doi          = {10.1093/BIOINFORMATICS/BTL218},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/ArmougomMKN06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/AsurROP06,
  author       = {Sitaram Asur and
                  Pichai Raman and
                  Matthew Eric Otey and
                  Srinivasan Parthasarathy},
  title        = {A model-based approach for mining membrane protein crystallization
                  trials},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {40--48},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl225},
  doi          = {10.1093/BIOINFORMATICS/BTL225},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/AsurROP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BorgwardtGRKSS06,
  author       = {Karsten M. Borgwardt and
                  Arthur Gretton and
                  Malte J. Rasch and
                  Hans{-}Peter Kriegel and
                  Bernhard Sch{\"{o}}lkopf and
                  Alexander J. Smola},
  title        = {Integrating structured biological data by Kernel Maximum Mean Discrepancy},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {49--57},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl242},
  doi          = {10.1093/BIOINFORMATICS/BTL242},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/BorgwardtGRKSS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BottegoniRRC06,
  author       = {Giovanni Bottegoni and
                  Walter Rocchia and
                  Maurizio Recanatini and
                  Andrea Cavalli},
  title        = {AClAP, Autonomous hierarchical agglomerative Cluster Analysis based
                  protocol to partition conformational datasets},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {58--65},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl212},
  doi          = {10.1093/BIOINFORMATICS/BTL212},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/BottegoniRRC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BourneB06,
  author       = {Philip E. Bourne and
                  S{\o}ren Brunak},
  title        = {{ISMB} 2006},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {1--2},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl373},
  doi          = {10.1093/BIOINFORMATICS/BTL373},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/BourneB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BurekHLVHK06,
  author       = {Patryk Burek and
                  Robert Hoehndorf and
                  Frank Loebe and
                  Johann Visagie and
                  Heinrich Herre and
                  Janet Kelso},
  title        = {A top-level ontology of functions and its application in the Open
                  Biomedical Ontologies},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {66--73},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl266},
  doi          = {10.1093/BIOINFORMATICS/BTL266},
  timestamp    = {Mon, 16 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/BurekHLVHK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Contreras-MoreiraC06,
  author       = {Bruno Contreras{-}Moreira and
                  Julio Collado{-}Vides},
  title        = {Comparative footprinting of DNA-binding proteins},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {74--80},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl215},
  doi          = {10.1093/BIOINFORMATICS/BTL215},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/Contreras-MoreiraC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/DiMaioSP06,
  author       = {Frank DiMaio and
                  Jude W. Shavlik and
                  George N. Phillips},
  title        = {A probabilistic approach to protein backbone tracing in electron density
                  maps},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {81--89},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl252},
  doi          = {10.1093/BIOINFORMATICS/BTL252},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/DiMaioSP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/DoWB06,
  author       = {Chuong B. Do and
                  Daniel A. Woods and
                  Serafim Batzoglou},
  title        = {CONTRAfold: {RNA} secondary structure prediction without physics-based
                  models},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {90--98},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl246},
  doi          = {10.1093/BIOINFORMATICS/BTL246},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/DoWB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/EbbelsBJ06,
  author       = {Timothy M. D. Ebbels and
                  Bernard F. Buxton and
                  David T. Jones},
  title        = {\emph{springScape}: visualisation of microarray and contextual bioinformatic
                  data using spring embedding and an "information landscape"},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {99--107},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl205},
  doi          = {10.1093/BIOINFORMATICS/BTL205},
  timestamp    = {Fri, 27 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/EbbelsBJ06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/EdelmanPGBBFM06,
  author       = {Elena J. Edelman and
                  Alessandro Porrello and
                  Justin Guinney and
                  Bala Balakumaran and
                  Andrea Bild and
                  Phillip G. Febbo and
                  Sayan Mukherjee},
  title        = {Analysis of sample set enrichment scores: assaying the enrichment
                  of sets of genes for individual samples in genome-wide expression
                  profiles},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {122--116},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl231},
  doi          = {10.1093/BIOINFORMATICS/BTL231},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/EdelmanPGBBFM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/EverettWH06,
  author       = {Logan Everett and
                  Li{-}San Wang and
                  Sridhar Hannenhalli},
  title        = {Dense subgraph computation via stochastic search: application to detect
                  transcriptional modules},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {117--123},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl260},
  doi          = {10.1093/BIOINFORMATICS/BTL260},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/EverettWH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/FaureNCT06,
  author       = {Adrien Faur{\'{e}} and
                  Aur{\'{e}}lien Naldi and
                  Claudine Chaouiya and
                  Denis Thieffry},
  title        = {Dynamical analysis of a generic Boolean model for the control of the
                  mammalian cell cycle},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {124--131},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl210},
  doi          = {10.1093/BIOINFORMATICS/BTL210},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/FaureNCT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/FischerGRGBB06,
  author       = {Bernd Fischer and
                  Jonas Grossmann and
                  Volker Roth and
                  Wilhelm Gruissem and
                  Sacha Baginsky and
                  Joachim M. Buhmann},
  title        = {Semi-supervised {LC/MS} alignment for differential proteomics},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {132--140},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl219},
  doi          = {10.1093/BIOINFORMATICS/BTL219},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/FischerGRGBB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/FoatMB06,
  author       = {Barrett C. Foat and
                  Alexandre V. Morozov and
                  Harmen J. Bussemaker},
  title        = {Statistical mechanical modeling of genome-wide transcription factor
                  occupancy data by MatrixREDUCE},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {141--149},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl223},
  doi          = {10.1093/BIOINFORMATICS/BTL223},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/FoatMB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/FratkinNBB06,
  author       = {Eugene Fratkin and
                  Brian T. Naughton and
                  Douglas L. Brutlag and
                  Serafim Batzoglou},
  title        = {MotifCut: regulatory motifs finding with maximum density subgraphs},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {156--157},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl243},
  doi          = {10.1093/BIOINFORMATICS/BTL243},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/FratkinNBB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/FussDDK06,
  author       = {Hendrik Fu{\ss} and
                  Werner Dubitzky and
                  C. Stephen Downes and
                  Mary Jo Kurth},
  title        = {Bistable switching and excitable behaviour in the activation of Src
                  at mitosis},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {164--165},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl201},
  doi          = {10.1093/BIOINFORMATICS/BTL201},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/FussDDK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/GeorgiS06,
  author       = {Benjamin Georgi and
                  Alexander Schliep},
  title        = {Context-specific independence mixture modeling for positional weight
                  matrices},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {166--173},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl249},
  doi          = {10.1093/BIOINFORMATICS/BTL249},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/GeorgiS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/GeorgievLD06,
  author       = {Ivelin Georgiev and
                  Ryan H. Lilien and
                  Bruce Randall Donald},
  title        = {Improved Pruning algorithms and Divide-and-Conquer strategies for
                  Dead-End Elimination, with application to protein design},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {174--183},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl220},
  doi          = {10.1093/BIOINFORMATICS/BTL220},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/GeorgievLD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/GevaertSTMM06,
  author       = {Olivier Gevaert and
                  Frank De Smet and
                  Dirk Timmerman and
                  Yves Moreau and
                  Bart De Moor},
  title        = {Predicting the prognosis of breast cancer by integrating clinical
                  and microarray data with Bayesian networks},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {184--190},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl230},
  doi          = {10.1093/BIOINFORMATICS/BTL230},
  timestamp    = {Wed, 07 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/GevaertSTMM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/GransethVE06,
  author       = {Erik Granseth and
                  H{\aa}kan Viklund and
                  Arne Elofsson},
  title        = {{ZPRED:} Predicting the distance to the membrane center for residues
                  in alpha-helical membrane proteins},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {191--196},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl206},
  doi          = {10.1093/BIOINFORMATICS/BTL206},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/GransethVE06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/HertelS06,
  author       = {Jana Hertel and
                  Peter F. Stadler},
  title        = {Hairpins in a Haystack: recognizing microRNA precursors in comparative
                  genomics data},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {197--202},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl257},
  doi          = {10.1093/BIOINFORMATICS/BTL257},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/HertelS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/HuardDW06,
  author       = {Fabien P. E. Huard and
                  Charlotte M. Deane and
                  Graham R. Wood},
  title        = {Modelling sequential protein folding under kinetic control},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {203--210},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl248},
  doi          = {10.1093/BIOINFORMATICS/BTL248},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/HuardDW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/JangLLPLP06,
  author       = {Hyunchul Jang and
                  Jaesoo Lim and
                  Joon{-}Ho Lim and
                  Soo{-}Jun Park and
                  Kyu{-}Chul Lee and
                  Seon{-}Hee Park},
  title        = {Finding the evidence for protein-protein interactions from PubMed
                  abstracts},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {234--226},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl203},
  doi          = {10.1093/BIOINFORMATICS/BTL203},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/JangLLPLP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/JojicRHKS06,
  author       = {Nebojsa Jojic and
                  Manuel Reyes{-}Gomez and
                  David Heckerman and
                  Carl Myers Kadie and
                  Ora Schueler{-}Furman},
  title        = {Learning {MHC} {I} - peptide binding},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {227--235},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl255},
  doi          = {10.1093/BIOINFORMATICS/BTL255},
  timestamp    = {Wed, 25 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/JojicRHKS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/JonesP06,
  author       = {Neil C. Jones and
                  Pavel A. Pevzner},
  title        = {Comparative genomics reveals unusually long motifs in mammalian genomes},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {236--242},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl265},
  doi          = {10.1093/BIOINFORMATICS/BTL265},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/JonesP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KarakocCS06,
  author       = {Emre Karako{\c{c}} and
                  Artem Cherkasov and
                  S{\"{u}}leyman Cenk Sahinalp},
  title        = {Distance based algorithms for small biomolecule classification and
                  structural similarity search},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {243--251},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl259},
  doi          = {10.1093/BIOINFORMATICS/BTL259},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/KarakocCS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KhatibWR06,
  author       = {Firas Khatib and
                  Matthew T. Weirauch and
                  Carol A. Rohl},
  title        = {Rapid knot detection and application to protein structure prediction},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {258--259},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl236},
  doi          = {10.1093/BIOINFORMATICS/BTL236},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/KhatibWR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KiracOY06,
  author       = {Mustafa Kirac and
                  Gultekin {\"{O}}zsoyoglu and
                  Jiong Yang},
  title        = {Annotating proteins by mining protein interaction networks},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {260--270},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl221},
  doi          = {10.1093/BIOINFORMATICS/BTL221},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/KiracOY06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KohTCHT06,
  author       = {Geoffrey Koh and
                  Huey Fern Carol Teong and
                  Marie{-}V{\'{e}}ronique Cl{\'{e}}ment and
                  David Hsu and
                  P. S. Thiagarajan},
  title        = {A decompositional approach to parameter estimation in pathway modeling:
                  a case study of the Akt and {MAPK} pathways and their crosstalk},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {271--280},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl264},
  doi          = {10.1093/BIOINFORMATICS/BTL264},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/KohTCHT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KrauseDBEPRMS06,
  author       = {Lutz Krause and
                  Naryttza N. Diaz and
                  Daniela Bartels and
                  Robert A. Edwards and
                  Alfred P{\"{u}}hler and
                  Forest Rohwer and
                  Folker Meyer and
                  Jens Stoye},
  title        = {Finding novel genes in bacterial communities isolated from the environment},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {281--289},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl247},
  doi          = {10.1093/BIOINFORMATICS/BTL247},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/KrauseDBEPRMS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/LassoAM06,
  author       = {Gorka Lasso and
                  John F. Antoniw and
                  Jonathan G. L. Mullins},
  title        = {A combinatorial pattern discovery approach for the prediction of membrane
                  dipping (re-entrant) loops},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {290--297},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl209},
  doi          = {10.1093/BIOINFORMATICS/BTL209},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/LassoAM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/LeeS06,
  author       = {Phil Hyoun Lee and
                  Hagit Shatkay},
  title        = {BNTagger: improved tagging {SNP} selection using Bayesian networks},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {211--219},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl233},
  doi          = {10.1093/BIOINFORMATICS/BTL233},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/LeeS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/LinMX06,
  author       = {Tien{-}ho Lin and
                  Eugene W. Myers and
                  Eric P. Xing},
  title        = {Interpreting anonymous {DNA} samples from mass disasters - probabilistic
                  forensic inference using genetic markers},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {298--306},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl200},
  doi          = {10.1093/BIOINFORMATICS/BTL200},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/LinMX06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/LiuYSXC06,
  author       = {Chunmei Liu and
                  Bo Yan and
                  Yinglei Song and
                  Ying Xu and
                  Liming Cai},
  title        = {Peptide sequence tag-based blind identification of post-translational
                  modifications with point process model},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {307--313},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl226},
  doi          = {10.1093/BIOINFORMATICS/BTL226},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/LiuYSXC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/LuRB06,
  author       = {Yong Lu and
                  Ronald Rosenfeld and
                  Ziv Bar{-}Joseph},
  title        = {Identifying cycling genes by combining sequence homology and expression
                  data},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {314--322},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl229},
  doi          = {10.1093/BIOINFORMATICS/BTL229},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/LuRB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/MaceLTCBO06,
  author       = {Daniel L. Mace and
                  Jiyoung Lee and
                  Richard W. Twigg and
                  Juliette Colinas and
                  Philip N. Benfey and
                  Uwe Ohler},
  title        = {Quantification of transcription factor expression from Arabidopsis
                  images},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {323--331},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl228},
  doi          = {10.1093/BIOINFORMATICS/BTL228},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/MaceLTCBO06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Magori-CohenLK06,
  author       = {Reuma Magori{-}Cohen and
                  Yoram Louzoun and
                  Steven H. Kleinstein},
  title        = {Mutation parameters from {DNA} sequence data using graph theoretic
                  measures on lineage trees},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {332--340},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl239},
  doi          = {10.1093/BIOINFORMATICS/BTL239},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/Magori-CohenLK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/MakGB06,
  author       = {Denise Y. F. Mak and
                  Yevgeniy Gelfand and
                  Gary Benson},
  title        = {Indel seeds for homology search},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {341--349},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl263},
  doi          = {10.1093/BIOINFORMATICS/BTL263},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/MakGB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/MannN06,
  author       = {Tobias P. Mann and
                  William Stafford Noble},
  title        = {Efficient identification of {DNA} hybridization partners in a sequence
                  database},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {350--358},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl240},
  doi          = {10.1093/BIOINFORMATICS/BTL240},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/MannN06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/MarkowitzIPSKLAMKMDHK06,
  author       = {Victor M. Markowitz and
                  Natalia Ivanova and
                  Krishna Palaniappan and
                  Ernest Szeto and
                  Frank Korzeniewski and
                  Athanasios Lykidis and
                  Iain Anderson and
                  Konstantinos Mavrommatis and
                  Victor Kunin and
                  H{\'{e}}ctor Garc{\'{\i}}a Mart{\'{\i}}n and
                  Inna Dubchak and
                  Philip Hugenholtz and
                  Nikos Kyrpides},
  title        = {An experimental metagenome data management and analysis system},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {359--367},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl217},
  doi          = {10.1093/BIOINFORMATICS/BTL217},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/MarkowitzIPSKLAMKMDHK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/MellorD06,
  author       = {Joe Mellor and
                  Charles DeLisi},
  title        = {An equilibrium partitioning model connecting gene expression and \emph{cis}-motif
                  content},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {368--374},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl253},
  doi          = {10.1093/BIOINFORMATICS/BTL253},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/MellorD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/NacherSKA06,
  author       = {Jose C. Nacher and
                  Jean{-}Marc Schwartz and
                  Minoru Kanehisa and
                  Tatsuya Akutsu},
  title        = {Identification of metabolic units induced by environmental signals},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {375--383},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl202},
  doi          = {10.1093/BIOINFORMATICS/BTL202},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/NacherSKA06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/NarlikarGOH06,
  author       = {Leelavati Narlikar and
                  Raluca Gord{\^{a}}n and
                  Uwe Ohler and
                  Alexander J. Hartemink},
  title        = {Informative priors based on transcription factor structural class
                  improve \emph{de novo} motif discovery},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {384--392},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl251},
  doi          = {10.1093/BIOINFORMATICS/BTL251},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/NarlikarGOH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/NgNJK06,
  author       = {Patrick Ng and
                  Niranjan Nagarajan and
                  Neil Jones and
                  Uri Keich},
  title        = {Apples to apples: improving the performance of motif finders and their
                  significance analysis in the Twilight Zone},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {393--401},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl245},
  doi          = {10.1093/BIOINFORMATICS/BTL245},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/NgNJK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/OfranYMSNR06,
  author       = {Yanay Ofran and
                  Guy Yachdav and
                  Eyal Mozes and
                  Ta{-}tsen Soong and
                  Rajesh Nair and
                  Burkhard Rost},
  title        = {Create and assess protein networks through molecular characteristics
                  of individual proteins},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {402--407},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl258},
  doi          = {10.1093/BIOINFORMATICS/BTL258},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/OfranYMSNR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/PierleoniMFC06,
  author       = {Andrea Pierleoni and
                  Pier Luigi Martelli and
                  Piero Fariselli and
                  Rita Casadio},
  title        = {BaCelLo: a balanced subcellular localization predictor},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {415--416},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl222},
  doi          = {10.1093/BIOINFORMATICS/BTL222},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/PierleoniMFC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/QiMKHJGG06,
  author       = {Yuan (Alan) Qi and
                  Patrycja E. Missiuro and
                  Ashish Kapoor and
                  Craig P. Hunter and
                  Tommi S. Jaakkola and
                  David K. Gifford and
                  Hui Ge},
  title        = {Semi-supervised analysis of gene expression profiles for lineage-specific
                  development in the \emph{Caenorhabditis elegans} embryo},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {417--423},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl256},
  doi          = {10.1093/BIOINFORMATICS/BTL256},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/QiMKHJGG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/SatyaMAPB06,
  author       = {Ravi Vijaya Satya and
                  Amar Mukherjee and
                  Gabriela Alexe and
                  Laxmi Parida and
                  Gyan Bhanot},
  title        = {Constructing Near-Perfect Phylogenies with multiple homoplasy events},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {514--522},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl262},
  doi          = {10.1093/BIOINFORMATICS/BTL262},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/SatyaMAPB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/SchliepR06,
  author       = {Alexander Schliep and
                  Sven Rahmann},
  title        = {Decoding non-unique oligonucleotide hybridization experiments of targets
                  related by a phylogenetic tree},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {424--430},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl254},
  doi          = {10.1093/BIOINFORMATICS/BTL254},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/SchliepR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ShahXDKLNM06,
  author       = {Sohrab P. Shah and
                  Xiang Xuan and
                  Ronald J. deLeeuw and
                  Mehrnoush Khojasteh and
                  Wan L. Lam and
                  Raymond T. Ng and
                  Kevin P. Murphy},
  title        = {Integrating copy number polymorphisms into array {CGH} analysis using
                  a robust {HMM}},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {431--439},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl238},
  doi          = {10.1093/BIOINFORMATICS/BTL238},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/ShahXDKLNM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Shakhnovich06,
  author       = {Boris E. Shakhnovich},
  title        = {Relative contributions of structural designability and functional
                  diversity in molecular evolution of duplicates},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {440--445},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl211},
  doi          = {10.1093/BIOINFORMATICS/BTL211},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/Shakhnovich06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ShatkayCB06,
  author       = {Hagit Shatkay and
                  Nawei Chen and
                  Dorothea Blostein},
  title        = {Integrating image data into biomedical text categorization},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {446--453},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl235},
  doi          = {10.1093/BIOINFORMATICS/BTL235},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/ShatkayCB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Sinha06,
  author       = {Saurabh Sinha},
  title        = {On counting position weight matrix matches in a sequence, with application
                  to discriminative motif finding},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {454--463},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl227},
  doi          = {10.1093/BIOINFORMATICS/BTL227},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/Sinha06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/SoldatovaCSK06,
  author       = {Larisa N. Soldatova and
                  Amanda Clare and
                  Andrew Sparkes and
                  Ross D. King},
  title        = {An ontology for a Robot Scientist},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {464--471},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl207},
  doi          = {10.1093/BIOINFORMATICS/BTL207},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/SoldatovaCSK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/SonnenburgZR06,
  author       = {S{\"{o}}ren Sonnenburg and
                  Alexander Zien and
                  Gunnar R{\"{a}}tsch},
  title        = {{ARTS:} accurate recognition of transcription starts in human},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {472--480},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl250},
  doi          = {10.1093/BIOINFORMATICS/BTL250},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/SonnenburgZR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/TangAAXCNRR06,
  author       = {Haixu Tang and
                  Randy J. Arnold and
                  Pedro Alves and
                  Zhiyin Xun and
                  David E. Clemmer and
                  Milos V. Novotny and
                  James P. Reilly and
                  Predrag Radivojac},
  title        = {A computational approach toward label-free protein quantification
                  using predicted peptide detectability},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {481--488},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl237},
  doi          = {10.1093/BIOINFORMATICS/BTL237},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/TangAAXCNRR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/TuWACS06,
  author       = {Zhidong Tu and
                  Li Wang and
                  Michelle N. Arbeitman and
                  Ting Chen and
                  Fengzhu Sun},
  title        = {An integrative approach for causal gene identification and gene regulatory
                  pathway inference},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {489--496},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl234},
  doi          = {10.1093/BIOINFORMATICS/BTL234},
  timestamp    = {Fri, 16 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/TuWACS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/VaradanMA06,
  author       = {Vinay Varadan and
                  David M. Miller III and
                  Dimitris Anastassiou},
  title        = {Computational inference of the molecular logic for synaptic connectivity
                  in \emph{C. elegans}},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {497--506},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl224},
  doi          = {10.1093/BIOINFORMATICS/BTL224},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/VaradanMA06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/VarshavskyGLH06,
  author       = {Roy Varshavsky and
                  Assaf Gottlieb and
                  Michal Linial and
                  David Horn},
  title        = {Novel Unsupervised Feature Filtering of Biological Data},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {507--513},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl214},
  doi          = {10.1093/BIOINFORMATICS/BTL214},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/VarshavskyGLH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/WangDXMJSAWM06,
  author       = {Pinglang Wang and
                  Manhong Dai and
                  Weijian Xuan and
                  Richard C. McEachin and
                  Anne U. Jackson and
                  Laura J. Scott and
                  Brian D. Athey and
                  Stanley J. Watson and
                  Fan Meng},
  title        = {{SNP} Function Portal: a web database for exploring the function implication
                  of {SNP} alleles},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {523--529},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl241},
  doi          = {10.1093/BIOINFORMATICS/BTL241},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/WangDXMJSAWM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/WolstencroftLTBS06,
  author       = {Katy Wolstencroft and
                  Phillip W. Lord and
                  Lydia Tabernero and
                  Andy Brass and
                  Robert Stevens},
  title        = {Protein classification using ontology classification},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {530--538},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl208},
  doi          = {10.1093/BIOINFORMATICS/BTL208},
  timestamp    = {Mon, 21 Jan 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/WolstencroftLTBS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/X06,
  title        = {{ISMB} 2006 Organization},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {3--7},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl374},
  doi          = {10.1093/BIOINFORMATICS/BTL374},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/X06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/YosefKR06,
  author       = {Nir Yosef and
                  Alon Kaufman and
                  Eytan Ruppin},
  title        = {Inferring Functional Pathways from Multi-Perturbation Data},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {539--546},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl204},
  doi          = {10.1093/BIOINFORMATICS/BTL204},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/YosefKR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/YuL06,
  author       = {Hong Yu and
                  Minsuk Lee},
  title        = {Accessing bioscience images from abstract sentences},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {547--556},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl261},
  doi          = {10.1093/BIOINFORMATICS/BTL261},
  timestamp    = {Wed, 25 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ismb/YuL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ZhangBASB06,
  author       = {Shaojie Zhang and
                  Ilya Borovok and
                  Yair Aharonowitz and
                  Roded Sharan and
                  Vineet Bafna},
  title        = {A sequence-based filtering method for ncRNA identification and its
                  application to searching for riboswitch elements},
  booktitle    = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  pages        = {557--565},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl232},
  doi          = {10.1093/BIOINFORMATICS/BTL232},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/ZhangBASB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ismb/2006,
  title        = {Proceedings 14th International Conference on Intelligent Systems for
                  Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
  year         = {2006},
  timestamp    = {Mon, 28 Aug 2006 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/2006.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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