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@article{DBLP:journals/ploscb/AbegazMVRRWB21, author = {Fentaw Abegaz and Anne{-}Claire M. F. Martines and Marcel A. Vieira{-}Lara and Melany Rios{-}Morales and Dirk{-}Jan Reijngoud and Ernst C. Wit and Barbara M. Bakker}, title = {Bistability in fatty-acid oxidation resulting from substrate inhibition}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009259}, doi = {10.1371/JOURNAL.PCBI.1009259}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AbegazMVRRWB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AbeysooriyaSKZ21, author = {Mandhri Abeysooriya and Megan Soria and Mary Sravya Kasu and Mark Ziemann}, title = {Gene name errors: Lessons not learned}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008984}, doi = {10.1371/JOURNAL.PCBI.1008984}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AbeysooriyaSKZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AboL21, author = {St{\'{e}}phanie M. C. Abo and Anita T. Layton}, title = {Modeling the circadian regulation of the immune system: Sexually dimorphic effects of shift work}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008514}, doi = {10.1371/JOURNAL.PCBI.1008514}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AboL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AchuthaPFV21, author = {Adarsh Chitradurga Achutha and Herbert Peremans and Uwe Firzlaff and Dieter Vanderelst}, title = {Efficient encoding of spectrotemporal information for bat echolocation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009052}, doi = {10.1371/JOURNAL.PCBI.1009052}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AchuthaPFV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AfschriftGJ21, author = {Maarten Afschrift and Friedl De Groote and Ilse Jonkers}, title = {Similar sensorimotor transformations control balance during standing and walking}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008369}, doi = {10.1371/JOURNAL.PCBI.1008369}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AfschriftGJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AgrawalK21, author = {Anamika Agrawal and Elena F. Koslover}, title = {Optimizing mitochondrial maintenance in extended neuronal projections}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009073}, doi = {10.1371/JOURNAL.PCBI.1009073}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AgrawalK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Aguirre-Tamaral21, author = {Adri{\'{a}}n Aguirre{-}Tamaral and Isabel Guerrero}, title = {Improving the understanding of cytoneme-mediated morphogen gradients by in silico modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009245}, doi = {10.1371/JOURNAL.PCBI.1009245}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Aguirre-Tamaral21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AhmedVJ21, author = {Md. Ashfaq Ahmed and Sharmila Venugopal and Ranu Jung}, title = {Engaging biological oscillators through second messenger pathways permits emergence of a robust gastric slow-wave during peristalsis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009644}, doi = {10.1371/JOURNAL.PCBI.1009644}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AhmedVJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AkilRJ21, author = {Alan Eric Akil and Robert Rosenbaum and Kresimir Josic}, title = {Balanced networks under spike-time dependent plasticity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008958}, doi = {10.1371/JOURNAL.PCBI.1008958}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AkilRJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Al-TahanM21, author = {Haider Al{-}Tahan and Yalda Mohsenzadeh}, title = {Reconstructing feedback representations in the ventral visual pathway with a generative adversarial autoencoder}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008775}, doi = {10.1371/JOURNAL.PCBI.1008775}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Al-TahanM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlaimoRMFSTMPF21, author = {Salvatore Alaimo and Rosaria Valentina Rapicavoli and Gioacchino P. Marceca and Alessandro La Ferlita and Oksana B. Serebrennikova and Philip N. Tsichlis and Bud Mishra and Alfredo Pulvirenti and Alfredo Ferro}, title = {{PHENSIM:} Phenotype Simulator}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009069}, doi = {10.1371/JOURNAL.PCBI.1009069}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AlaimoRMFSTMPF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlamoJMM21, author = {Diego del Alamo and Kevin L. Jagessar and Jens Meiler and Hassane S. Mchaourab}, title = {Methodology for rigorous modeling of protein conformational changes by Rosetta using {DEER} distance restraints}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009107}, doi = {10.1371/JOURNAL.PCBI.1009107}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AlamoJMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlarconSGM21, author = {Tom{\'{a}}s Alarc{\'{o}}n and Josep Sardany{\'{e}}s and Antoni Guillam{\'{o}}n and Javier A. Men{\'{e}}ndez}, title = {Bivalent chromatin as a therapeutic target in cancer: An in silico predictive approach for combining epigenetic drugs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008408}, doi = {10.1371/JOURNAL.PCBI.1008408}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AlarconSGM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlberdingS21, author = {Jonathan P. Alberding and Timothy W. Secomb}, title = {Simulation of angiogenesis in three dimensions: Application to cerebral cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009164}, doi = {10.1371/JOURNAL.PCBI.1009164}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AlberdingS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlbersLGGHM21, author = {David J. Albers and Matthew E. Levine and Bruce J. Gluckman and Henry N. Ginsberg and George Hripcsak and Lena Mamykina}, title = {Correction: Personalized glucose forecasting for type 2 diabetes using data assimilation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009325}, doi = {10.1371/JOURNAL.PCBI.1009325}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AlbersLGGHM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlborziNNRD21, author = {Seyed Ziaeddin Alborzi and Amina Ahmed Nacer and Hiba Najjar and David W. Ritchie and Marie{-}Dominique Devignes}, title = {PPIDomainMiner: Inferring domain-domain interactions from multiple sources of protein-protein interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008844}, doi = {10.1371/JOURNAL.PCBI.1008844}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AlborziNNRD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlieeKR21, author = {Maryam Aliee and Matt J. Keeling and Kat S. Rock}, title = {Modelling to explore the potential impact of asymptomatic human infections on transmission and dynamics of African sleeping sickness}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009367}, doi = {10.1371/JOURNAL.PCBI.1009367}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AlieeKR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AllenSSSKHG21, author = {Benjamin Allen and Christine Sample and Patricia Steinhagen and Julia Shapiro and Matthew King and Timothy Hedspeth and Megan Goncalves}, title = {Fixation probabilities in graph-structured populations under weak selection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008695}, doi = {10.1371/JOURNAL.PCBI.1008695}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AllenSSSKHG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AllenmarkGGZMS21, author = {Fredrik Allenmark and Ahu Gokce and Thomas Geyer and Artyom Zinchenko and Hermann J. M{\"{u}}ller and Zhuanghua Shi}, title = {Inter-trial effects in priming of pop-out: Comparison of computational updating models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009332}, doi = {10.1371/JOURNAL.PCBI.1009332}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AllenmarkGGZMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Alnasir21, author = {Jamie J. Alnasir}, title = {Fifteen quick tips for success with HPC, i.e., responsibly BASHing that Linux cluster}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009207}, doi = {10.1371/JOURNAL.PCBI.1009207}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Alnasir21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlsiyabiSCS21, author = {Adil Alsiyabi and Ariadna Gonzalez Solis and Edgar B. Cahoon and Rajib Saha}, title = {Dissecting the regulatory roles of {ORM} proteins in the sphingolipid pathway of plants}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008284}, doi = {10.1371/JOURNAL.PCBI.1008284}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AlsiyabiSCS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AltanSMP21, author = {Ege Altan and Sara A. Solla and Lee E. Miller and Eric J. Perreault}, title = {Estimating the dimensionality of the manifold underlying multi-electrode neural recordings}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008591}, doi = {10.1371/JOURNAL.PCBI.1008591}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AltanSMP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AmbrosGGSNMDR21, author = {Silvia Ambr{\'{o}}s and Neus G{\'{o}}mez{-}Mu{\~{n}}oz and Silvia Gim{\'{e}}nez{-}Santamarina and Javier S{\'{a}}nchez{-}Vicente and Josep Navarro{-}L{\'{o}}pez and Fernando Mart{\'{\i}}nez and Jos{\'{e}}{-}Antonio Dar{\`{o}}s and Guillermo Rodrigo}, title = {Molecular signatures of silencing suppression degeneracy from a complex {RNA} virus}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009166}, doi = {10.1371/JOURNAL.PCBI.1009166}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AmbrosGGSNMDR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Amitai21, author = {Assaf Amitai}, title = {Viral surface geometry shapes influenza and coronavirus spike evolution through antibody pressure}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009664}, doi = {10.1371/JOURNAL.PCBI.1009664}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Amitai21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AngTHZPC21, author = {Grace Wan Yu Ang and Clara S. Tang and Y. Audrey Hay and Sara Zannone and Ole Paulsen and Claudia Clopath}, title = {The functional role of sequentially neuromodulated synaptic plasticity in behavioural learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009017}, doi = {10.1371/JOURNAL.PCBI.1009017}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AngTHZPC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Angeles-Martinez21, author = {Liliana Angeles{-}Martinez and Vassily Hatzimanikatis}, title = {Spatio-temporal modeling of the crowding conditions and metabolic variability in microbial communities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009140}, doi = {10.1371/JOURNAL.PCBI.1009140}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Angeles-Martinez21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Angeles-Martinez21a, author = {Liliana Angeles{-}Martinez and Vassily Hatzimanikatis}, title = {The influence of the crowding assumptions in biofilm simulations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009158}, doi = {10.1371/JOURNAL.PCBI.1009158}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Angeles-Martinez21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AnnapragadaGBWS21, author = {Akshaya V. Annapragada and Joseph L. Greenstein and Sanjukta N. Bose and Bradford D. Winters and Sridevi V. Sarma and Raimond L. Winslow}, title = {{SWIFT:} {A} deep learning approach to prediction of hypoxemic events in critically-Ill patients using SpO2 waveform prediction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009712}, doi = {10.1371/JOURNAL.PCBI.1009712}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AnnapragadaGBWS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AnsmannB21, author = {Gerrit Ansmann and Tobias Bollenbach}, title = {Building clone-consistent ecosystem models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008635}, doi = {10.1371/JOURNAL.PCBI.1008635}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AnsmannB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AntiaAB21, author = {Rustom Antia and Hasan Ahmed and James J. Bull}, title = {Directed attenuation to enhance vaccine immunity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008602}, doi = {10.1371/JOURNAL.PCBI.1008602}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AntiaAB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Aponte-SerranoW21, author = {Josua Aponte{-}Serrano and Jordan J. A. Weaver and T. J. Sego and James A. Glazier and Jason E. Shoemaker}, title = {Multicellular spatial model of {RNA} virus replication and interferon responses reveals factors controlling plaque growth dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008874}, doi = {10.1371/JOURNAL.PCBI.1008874}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Aponte-SerranoW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AqilAKH21, author = {Marco Aqil and Selen Atasoy and Morten L. Kringelbach and Rikkert Hindriks}, title = {Graph neural fields: {A} framework for spatiotemporal dynamical models on the human connectome}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008310}, doi = {10.1371/JOURNAL.PCBI.1008310}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AqilAKH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ArifMKCJMGKAN21, author = {Suchinta Arif and Melanie Duc Bo Massey and Natalie Klinard and Julie Charbonneau and Loay Jabre and Ana Barbosa Martins and Danielle Gaitor and Rhiannon Kirton and Catalina Albury and Karma Nanglu}, title = {Ten simple rules for supporting historically underrepresented students in science}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009313}, doi = {10.1371/JOURNAL.PCBI.1009313}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ArifMKCJMGKAN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AronJCCKZRKFM21, author = {Shaun Aron and C. Victor Jongeneel and Paballo Abel Chauke and Melek Chaouch and Judit Kumuthini and Lyndon Zass and Fouzia Radouani and Samar Kamal Kassim and Faisal M. Fadlelmola and Nicola J. Mulder}, title = {Ten simple rules for developing bioinformatics capacity at an academic institution}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009592}, doi = {10.1371/JOURNAL.PCBI.1009592}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AronJCCKZRKFM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AroraWHMCPD21, author = {Yashika Arora and Pushpinder Walia and Mitsuhiro Hayashibe and Makii Muthalib and Shubhajit Roy Chowdhury and St{\'{e}}phane Perrey and Anirban Dutta}, title = {Grey-box modeling and hypothesis testing of functional near-infrared spectroscopy-based cerebrovascular reactivity to anodal high-definition tDCS in healthy humans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009386}, doi = {10.1371/JOURNAL.PCBI.1009386}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AroraWHMCPD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ArthurJBRF21, author = {Ronan F. Arthur and James H. Jones and Matthew H. Bonds and Yoav Ram and Marcus W. Feldman}, title = {Adaptive social contact rates induce complex dynamics during epidemics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008639}, doi = {10.1371/JOURNAL.PCBI.1008639}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ArthurJBRF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ArthursKMMGDCVS21, author = {Christopher J. Arthurs and Rostislav Khlebnikov and Alex Melville and Marija Marcan and Alberto G{\'{o}}mez and Desmond Dillon{-}Murphy and Federica Cuomo and Miguel Silva Vieira and Jonas Schollenberger and Sabrina R. Lynch and Christopher Tossas{-}Betancourt and Kritika Iyer and Sara Hopper and Elizabeth Livingston and Pouya Youssefi and Alia Noorani and Sabrina Ben Ahmed and Foeke J. H. Nauta and Theodorus M. J. van Bakel and Yunus Ahmed and Petrus A. J. van Bakel and Jonathan P. Mynard and Paolo Di Achille and Hamid Gharahi and Kevin D. Lau and Vasilina Filonova and Miquel Aguirre and Nitesh Nama and Nan Xiao and Seungik Baek and Krishna C. Garikipati and Onkar Sahni and David Nordsletten and C. Alberto Figueroa}, title = {{CRIMSON:} An open-source software framework for cardiovascular integrated modelling and simulation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008881}, doi = {10.1371/JOURNAL.PCBI.1008881}, timestamp = {Wed, 14 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ArthursKMMGDCVS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AshidaTK21, author = {Go Ashida and Daniel J. Tollin and Jutta Kretzberg}, title = {Robustness of neuronal tuning to binaural sound localization cues against age-related loss of inhibitory synaptic inputs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009130}, doi = {10.1371/JOURNAL.PCBI.1009130}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AshidaTK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Asplund-Samuelsson21, author = {Johannes Asplund{-}Samuelsson and Elton P. Hudson}, title = {Wide range of metabolic adaptations to the acquisition of the Calvin cycle revealed by comparison of microbial genomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008742}, doi = {10.1371/JOURNAL.PCBI.1008742}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Asplund-Samuelsson21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AtauriTTFKCC21, author = {Pedro de Atauri and M{\'{\i}}riam Tarrado{-}Castellarnau and Josep Tarrag{\'{o}}{-}Celada and Carles Foguet and Effrosyni Karakitsou and Josep J. Centelles and Marta Cascante}, title = {Integrating systemic and molecular levels to infer key drivers sustaining metabolic adaptations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009234}, doi = {10.1371/JOURNAL.PCBI.1009234}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AtauriTTFKCC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AtiyaHDF21, author = {Nadim A. A. Atiya and Quentin J. M. Huys and Raymond J. Dolan and Stephen M. Fleming}, title = {Explaining distortions in metacognition with an attractor network model of decision uncertainty}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009201}, doi = {10.1371/JOURNAL.PCBI.1009201}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AtiyaHDF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AveryIDA21, author = {Leon Avery and Brian P. Ingalls and Catherine I. Dumur and Alexander Artyukhin}, title = {A Keller-Segel model for {C} elegans {L1} aggregation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009231}, doi = {10.1371/JOURNAL.PCBI.1009231}, timestamp = {Wed, 09 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AveryIDA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AvilaMT21, author = {Diego Barra Avila and Juan Ramon Melendez{-}Alvarez and Xiao{-}Jun Tian}, title = {Control of tissue homeostasis, tumorigenesis, and degeneration by coupled bidirectional bistable switches}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009606}, doi = {10.1371/JOURNAL.PCBI.1009606}, timestamp = {Thu, 11 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AvilaMT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AvramKVKRDPW21, author = {Oren Avram and Aya Kigel and Anna Vaisman{-}Mentesh and Sharon Kligsberg and Shai Rosenstein and Yael Dror and Tal Pupko and Yariv Wine}, title = {{PASA:} Proteomic analysis of serum antibodies web server}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008607}, doi = {10.1371/JOURNAL.PCBI.1008607}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AvramKVKRDPW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AydinHDDCB21, author = {Ali{-}Kemal Aydin and William Davis Haselden and Julie Dang and Patrick J. Drew and Serge Charpak and Davide Boido}, title = {Iliski, a software for robust calculation of transfer functions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008614}, doi = {10.1371/JOURNAL.PCBI.1008614}, timestamp = {Wed, 26 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AydinHDDCB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Aylett-BullockC21, author = {Joseph Aylett{-}Bullock and Carolina Cuesta{-}L{\'{a}}zaro and Arnau Quera{-}Bofarull and Anjali Katta and Katherine Hoffmann Pham and Benjamin Hoover and Hendrik Strobelt and Rebeca Moreno Jimenez and Aidan Sedgewick and Egmond Samir Evers and David Kennedy and Sandra Harlass and Allen Gidraf Kahindo Maina and Ahmad Hussien and Miguel A. Luengo{-}Oroz}, title = {Operational response simulation tool for epidemics within refugee and {IDP} settlements: {A} scenario-based case study of the Cox's Bazar settlement}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009360}, doi = {10.1371/JOURNAL.PCBI.1009360}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Aylett-BullockC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AytenfisuDKDSM21, author = {Asaminew H. Aytenfisu and Daniel Deredge and Erik H. Klontz and Jonathan Du and Eric J. Sundberg and Alexander D. MacKerell Jr.}, title = {Insights into substrate recognition and specificity for IgG by Endoglycosidase {S2}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009103}, doi = {10.1371/JOURNAL.PCBI.1009103}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/AytenfisuDKDSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BahmaniFKAATSP21, author = {Amir Bahmani and Kyle Ferriter and Vandhana Krishnan and Arash Alavi and Amir Alavi and Philip S. Tsao and Michael P. Snyder and Cuiping Pan}, title = {Swarm: {A} federated cloud framework for large-scale variant analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008977}, doi = {10.1371/JOURNAL.PCBI.1008977}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BahmaniFKAATSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BakKLH21, author = {Ji Hyun Bak and Min Hyeok Kim and Lei Liu and Changbong Hyeon}, title = {A unified framework for inferring the multi-scale organization of chromatin domains from Hi-C}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008834}, doi = {10.1371/JOURNAL.PCBI.1008834}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BakKLH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BakerMS21, author = {Jordan J. Baker and Christopher J. P. Mathy and Julia Schaletzky}, title = {A proposed workflow for proactive virus surveillance and prediction of variants for vaccine design}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009624}, doi = {10.1371/JOURNAL.PCBI.1009624}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BakerMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BakerVW21, author = {Daniel H. Baker and Greta Vilidaite and Alex R. Wade}, title = {Steady-state measures of visual suppression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009507}, doi = {10.1371/JOURNAL.PCBI.1009507}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BakerVW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BalabanGRSS21, author = {Gabriel Balaban and Ivar Grytten and Knut Dagestad Rand and Lonneke Scheffer and Geir Kjetil Sandve}, title = {Ten simple rules for quick and dirty scientific programming}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008549}, doi = {10.1371/JOURNAL.PCBI.1008549}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BalabanGRSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Balaguer-Ballester21, author = {Emili Balaguer{-}Ballester and Ramon Nogueira and Juan M. Abolafia and Rub{\'{e}}n Moreno{-}Bote and Maria V. Sanchez{-}Vives}, title = {Correction: Representation of foreseeable choice outcomes in orbitofrontal cortex triplet-wise interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009710}, doi = {10.1371/JOURNAL.PCBI.1009710}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Balaguer-Ballester21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BalakrishnaSSKK21, author = {Suraj Balakrishna and Luisa Salazar{-}Vizcaya and Axel J. Schmidt and Viacheslav Kachalov and Katharina Kusejko and Maria Christine Thurnheer and Jan A. Roth and Dunja Nicca and Matthias Cavassini and Manuel Battegay and Patrick Schmid and Enos Bernasconi and Huldrych F. G{\"{u}}nthard and Andri Rauch and Roger D. Kouyos and The Swiss Hiv Cohort Study}, title = {Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: {A} modelling study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009529}, doi = {10.1371/JOURNAL.PCBI.1009529}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BalakrishnaSSKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BanavarTDYPC21, author = {Samhita P. Banavar and Michael Trogdon and Brian Drawert and Tau{-}Mu Yi and Linda R. Petzold and Otger Camp{\`{a}}s}, title = {Coordinating cell polarization and morphogenesis through mechanical feedback}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007971}, doi = {10.1371/JOURNAL.PCBI.1007971}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BanavarTDYPC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BaranskiMGOMAK21, author = {Alex Baranski and Idan Milo and Shirley Greenbaum and John{-}Paul Oliveria and Dunja Mrdjen and Michael Angelo and Leeat Keren}, title = {{MAUI} {(MBI} Analysis User Interface) - An image processing pipeline for Multiplexed Mass Based Imaging}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008887}, doi = {10.1371/JOURNAL.PCBI.1008887}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BaranskiMGOMAK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BarberMMA21, author = {Felix Barber and Jiseon Min and Andrew W. Murray and Ariel Amir}, title = {Modeling the impact of single-cell stochasticity and size control on the population growth rate in asymmetrically dividing cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009080}, doi = {10.1371/JOURNAL.PCBI.1009080}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BarberMMA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BarenboimKAJWBB21, author = {Maxim Barenboim and Michal Kov{\'{a}}c and Baptiste Ameline and David T. W. Jones and Olaf Witt and Stefan Bielack and Stefan Burdach and Daniel Baumhoer and Michaela Nathrath}, title = {{DNA} methylation-based classifier and gene expression signatures detect BRCAness in osteosarcoma}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009562}, doi = {10.1371/JOURNAL.PCBI.1009562}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BarenboimKAJWBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BarlukovaR21, author = {Ayuna Barlukova and Igor M. Rouzine}, title = {The evolutionary origin of the universal distribution of mutation fitness effect}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008822}, doi = {10.1371/JOURNAL.PCBI.1008822}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BarlukovaR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BarrosCBAL21, author = {Claudio Daniel Tenorio de Barros and Maira Arruda Cardoso and Paulo Mascarello Bisch and Helena M. Araujo and Francisco J. P. Lopes}, title = {A reaction-diffusion network model predicts a dual role of Cactus/I{\(\kappa\)}B to regulate Dorsal/NF{\(\kappa\)}B nuclear translocation in Drosophila}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009040}, doi = {10.1371/JOURNAL.PCBI.1009040}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BarrosCBAL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BartlettABS21, author = {Michael John Bartlett and Feyza Nur Arslan and Adriana Bankston and Sarvenaz Sarabipour}, title = {Ten simple rules to improve academic work-life balance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009124}, doi = {10.1371/JOURNAL.PCBI.1009124}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BartlettABS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BasinskiFSVRLBW21, author = {Andrew J. Basinski and Elisabeth Fichet{-}Calvet and Anna R. Sjodin and Tanner J. Varrelman and Christopher H. Remien and Nathan C. Layman and Brian H. Bird and David J. Wolking and Corina Monagin and Bruno M. Ghersi and Peter A. Barry and Michael A. Jarvis and Paul E. Gessler and Scott L. Nuismer}, title = {Bridging the gap: Using reservoir ecology and human serosurveys to estimate Lassa virus spillover in West Africa}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008811}, doi = {10.1371/JOURNAL.PCBI.1008811}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BasinskiFSVRLBW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BassotE21, author = {Claudio Bassot and Arne Elofsson}, title = {Accurate contact-based modelling of repeat proteins predicts the structure of new repeats protein families}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008798}, doi = {10.1371/JOURNAL.PCBI.1008798}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BassotE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BattistiniDTCPL21, author = {Federica Battistini and Pablo D. Dans and Montserrat Terrazas and Chiara L. Castellazzi and Guillem Portella and Mireia Labrador and N{\'{u}}ria Villegas and Isabelle Brun{-}Heath and Carlos Gonz{\'{a}}lez and Modesto Orozco}, title = {The Impact of the HydroxyMethylCytosine epigenetic signature on {DNA} structure and function}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009547}, doi = {10.1371/JOURNAL.PCBI.1009547}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BattistiniDTCPL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BauerCDLIMOP21, author = {Simon Bauer and Sebasti{\'{a}}n Contreras and Jonas Dehning and Matthias Linden and Emil Iftekhar and Sebastian B. Mohr and Alvaro Olivera{-}Nappa and Viola Priesemann}, title = {Relaxing restrictions at the pace of vaccination increases freedom and guards against further {COVID-19} waves}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009288}, doi = {10.1371/JOURNAL.PCBI.1009288}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BauerCDLIMOP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BauerPFTGF21, author = {Andreas Bauer and Magdalena Prechov{\'{a}} and Lena Fischer and Ingo Thievessen and Martin Gregor and Ben Fabry}, title = {pyTFM: {A} tool for traction force and monolayer stress microscopy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008364}, doi = {10.1371/JOURNAL.PCBI.1008364}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BauerPFTGF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BealPNBC21, author = {Jonas B{\'{e}}al and Lorenzo Pantolini and Vincent No{\"{e}}l and Emmanuel Barillot and Laurence Calzone}, title = {Personalized logical models to investigate cancer response to {BRAF} treatments in melanomas and colorectal cancers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007900}, doi = {10.1371/JOURNAL.PCBI.1007900}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BealPNBC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BeckerDFFGLNVVK21, author = {Ann{-}Kristin Becker and Marcus D{\"{o}}rr and Stephan B. Felix and Fabian Frost and Hans J{\"{o}}rgen Grabe and Markus M. Lerch and Matthias Nauck and Uwe V{\"{o}}lker and Henry V{\"{o}}lzke and Lars Kaderali}, title = {From heterogeneous healthcare data to disease-specific biomarker networks: {A} hierarchical Bayesian network approach}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008735}, doi = {10.1371/JOURNAL.PCBI.1008735}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BeckerDFFGLNVVK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BeckerT21, author = {Moritz F. P. Becker and Christian Tetzlaff}, title = {The biophysical basis underlying the maintenance of early phase long-term potentiation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008813}, doi = {10.1371/JOURNAL.PCBI.1008813}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BeckerT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BehleR21, author = {Eric Behle and Ad{\'{e}}la{\"{\i}}de Raguin}, title = {Stochastic model of lignocellulosic material saccharification}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009262}, doi = {10.1371/JOURNAL.PCBI.1009262}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BehleR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BekiarisK21, author = {Pavlos Stephanos Bekiaris and Steffen Klamt}, title = {Designing microbial communities to maximize the thermodynamic driving force for the production of chemicals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009093}, doi = {10.1371/JOURNAL.PCBI.1009093}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BekiarisK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BelevichJ21, author = {Ilya Belevich and Eija Jokitalo}, title = {DeepMIB: User-friendly and open-source software for training of deep learning network for biological image segmentation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008374}, doi = {10.1371/JOURNAL.PCBI.1008374}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BelevichJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Ben-ElazarAJLKJ21, author = {Shay Ben{-}Elazar and Miriam Ragle Aure and Kristin Jonsdottir and Suvi{-}Katri Leivonen and Vessela N. Kristensen and Emiel A. M. Janssen and Kristine Kleivi Sahlberg and Ole Christian Lingj{\ae}rde and Zohar Yakhini}, title = {miRNA normalization enables joint analysis of several datasets to increase sensitivity and to reveal novel miRNAs differentially expressed in breast cancer}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008608}, doi = {10.1371/JOURNAL.PCBI.1008608}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Ben-ElazarAJLKJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BeneteauSSA21, author = {Thomas Beneteau and Christian Selinger and Mircea{-}Traian Sofonea and Samuel Alizon}, title = {Episome partitioning and symmetric cell divisions: Quantifying the role of random events in the persistence of {HPV} infections}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009352}, doi = {10.1371/JOURNAL.PCBI.1009352}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BeneteauSSA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BennettPSP21, author = {Jason Bennett and Mikhail Pomaznoy and Akul Singhania and Bjoern Peters}, title = {A metric for evaluating biological information in gene sets and its application to identify co-expressed gene clusters in {PBMC}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009459}, doi = {10.1371/JOURNAL.PCBI.1009459}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BennettPSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BensonDGHHM21, author = {Lee Benson and Ross S. Davidson and Darren M. Green and Andrew Hoyle and Mike R. Hutchings and Glenn Marion}, title = {When and why direct transmission models can be used for environmentally persistent pathogens}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009652}, doi = {10.1371/JOURNAL.PCBI.1009652}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BensonDGHHM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BernardiDBL21, author = {Davide Bernardi and Guy Doron and Michael Brecht and Benjamin Lindner}, title = {A network model of the barrel cortex combined with a differentiator detector reproduces features of the behavioral response to single-neuron stimulation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007831}, doi = {10.1371/JOURNAL.PCBI.1007831}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BernardiDBL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BerretCSB21, author = {Bastien Berret and Adrien Conessa and Nicolas Schweighofer and Etienne Burdet}, title = {Stochastic optimal feedforward-feedback control determines timing and variability of arm movements with or without vision}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009047}, doi = {10.1371/JOURNAL.PCBI.1009047}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BerretCSB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BestBGRP21, author = {Katharine Best and Dan H. Barouch and J{\'{e}}r{\'{e}}mie Guedj and Ruy M. Ribeiro and Alan S. Perelson}, title = {Zika virus dynamics: Effects of inoculum dose, the innate immune response and viral interference}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008564}, doi = {10.1371/JOURNAL.PCBI.1008564}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BestBGRP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BettiMGKMPS21, author = {Lorenzo Betti and Gianmarco De Francisci Morales and Laetitia Gauvin and Kyriaki Kalimeri and Yelena Mejova and Daniela Paolotti and Michele Starnini}, title = {Detecting adherence to the recommended childhood vaccination schedule from user-generated content in a {US} parenting forum}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008919}, doi = {10.1371/JOURNAL.PCBI.1008919}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BettiMGKMPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BhadraYRH21, author = {Pratiti Bhadra and Lalitha Yadhanapudi and Karin R{\"{o}}misch and Volkhard Helms}, title = {How does Sec63 affect the conformation of Sec61 in yeast?}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008855}, doi = {10.1371/JOURNAL.PCBI.1008855}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BhadraYRH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Bhalla21, author = {Upinder S. Bhalla}, title = {HillTau: {A} fast, compact abstraction for model reduction in biochemical signaling networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009621}, doi = {10.1371/JOURNAL.PCBI.1009621}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Bhalla21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BhandariLRCDG21, author = {Bikash K. Bhandari and Chun Shen Lim and Daniela M. Remus and Augustine Chen and Craig van Dolleweerd and Paul P. Gardner}, title = {Analysis of 11, 430 recombinant protein production experiments reveals that protein yield is tunable by synonymous codon changes of translation initiation sites}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009461}, doi = {10.1371/JOURNAL.PCBI.1009461}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BhandariLRCDG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BinCCFLMMPSSS21, author = {Michelangelo Bin and Peter Y. K. Cheung and Emanuele Crisostomi and Pietro Ferraro and Hugo Lhachemi and Roderick Murray{-}Smith and Connor Myant and Thomas Parisini and Robert Shorten and Sebastian Stein and Lewi Stone}, title = {Post-lockdown abatement of {COVID-19} by fast periodic switching}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008604}, doi = {10.1371/JOURNAL.PCBI.1008604}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BinCCFLMMPSSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BirdJC21, author = {Alex D. Bird and Peter Jedlicka and Hermann Cuntz}, title = {Dendritic normalisation improves learning in sparsely connected artificial neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009202}, doi = {10.1371/JOURNAL.PCBI.1009202}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BirdJC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BishopMFCAGH21, author = {Peter J. Bishop and Krijn B. Michel and Antoine Falisse and Andrew R. Cuff and Vivian R. Allen and Friedl De Groote and John R. Hutchinson}, title = {Computational modelling of muscle fibre operating ranges in the hindlimb of a small ground bird (Eudromia elegans), with implications for modelling locomotion in extinct species}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008843}, doi = {10.1371/JOURNAL.PCBI.1008843}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BishopMFCAGH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BiswasDI21, author = {Debojyoti Biswas and Peter N. Devreotes and Pablo A. Iglesias}, title = {Three-dimensional stochastic simulation of chemoattractant-mediated excitability in cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008803}, doi = {10.1371/JOURNAL.PCBI.1008803}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BiswasDI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BlasselTVPHGD21, author = {Luc Blassel and Anna Tostevin and Christian Julian Villabona{-}Arenas and Martine Peeters and St{\'{e}}phane Hu{\'{e}} and Olivier Gascuel}, title = {Using machine learning and big data to explore the drug resistance landscape in {HIV}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008873}, doi = {10.1371/JOURNAL.PCBI.1008873}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BlasselTVPHGD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BodnerBCGMPS21, author = {Korryn Bodner and Chris Brimacombe and Emily S. Chenery and Ariel Greiner and Anne M. McLeod and Stephanie R. Penk and Juan S. Vargas Soto}, title = {Ten simple rules for tackling your first mathematical models: {A} guide for graduate students by graduate students}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008539}, doi = {10.1371/JOURNAL.PCBI.1008539}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BodnerBCGMPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BodovaSB21, author = {Katar{\'{\i}}na Bodov{\'{a}} and Eniko Sz{\'{e}}p and Nicholas H. Barton}, title = {Dynamic maximum entropy provides accurate approximation of structured population dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009661}, doi = {10.1371/JOURNAL.PCBI.1009661}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BodovaSB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BoeckRG21, author = {Jolan De Boeck and Jan Rombouts and Lendert Gelens}, title = {A modular approach for modeling the cell cycle based on functional response curves}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009008}, doi = {10.1371/JOURNAL.PCBI.1009008}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BoeckRG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BornetDHFB21, author = {Alban Bornet and Adrien Doerig and Michael H. Herzog and Gregory Francis and Erik Van der Burg}, title = {Shrinking Bouma's window: How to model crowding in dense displays}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009187}, doi = {10.1371/JOURNAL.PCBI.1009187}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BornetDHFB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BorreJAMBJHKKT21, author = {Eline De Borre and Wout Joseph and Reza Aminzadeh and Pie M{\"{u}}ller and Matthieu N. Boone and Iv{\'{a}}n Josipovic and Sina Hashemizadeh and Niels Kuster and Sven K{\"{u}}hn and Arno Thielens}, title = {Radio-frequency exposure of the yellow fever mosquito {(A.} aegypti) from 2 to 240 GHz}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009460}, doi = {10.1371/JOURNAL.PCBI.1009460}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BorreJAMBJHKKT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BoudreauPBS21, author = {Mathieu Boudreau and Jean{-}Baptiste Poline and Pierre Bellec and Nikola Stikov}, title = {On the open-source landscape of {PLOS} Computational Biology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008725}, doi = {10.1371/JOURNAL.PCBI.1008725}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BoudreauPBS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BoumanRBR21, author = {Judith A. Bouman and Julien Riou and Sebastian Bonhoeffer and Roland R. Regoes}, title = {Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008728}, doi = {10.1371/JOURNAL.PCBI.1008728}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BoumanRBR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BoutinFCRP21, author = {Victor Boutin and Angelo Franciosini and Fr{\'{e}}d{\'{e}}ric Chavane and Franck Ruffier and Laurent Perrinet}, title = {Sparse deep predictive coding captures contour integration capabilities of the early visual system}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008629}, doi = {10.1371/JOURNAL.PCBI.1008629}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BoutinFCRP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BozhanovaHBGGBM21, author = {Nina G. Bozhanova and Joel M. Harp and Brian Joseph Bender and Alexey S. Gavrikov and Dmitry A. Gorbachev and Mikhail S. Baranov and Christina B. Mercado and Xuan Zhang and Konstantin A. Lukyanov and Alexander S. Mishin and Jens Meiler}, title = {Computational redesign of a fluorogen activating protein with Rosetta}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009555}, doi = {10.1371/JOURNAL.PCBI.1009555}, timestamp = {Tue, 19 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BozhanovaHBGGBM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BracherRGR21, author = {Johannes Bracher and Evan L. Ray and Tilmann Gneiting and Nicholas G. Reich}, title = {Evaluating epidemic forecasts in an interval format}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008618}, doi = {10.1371/JOURNAL.PCBI.1008618}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BracherRGR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BrandaniTT21, author = {Giovanni B. Brandani and Cheng Tan and Shoji Takada}, title = {The kinetic landscape of nucleosome assembly: {A} coarse-grained molecular dynamics study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009253}, doi = {10.1371/JOURNAL.PCBI.1009253}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BrandaniTT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BrandiesH21, author = {Parice A. Brandies and Carolyn J. Hogg}, title = {Ten simple rules for getting started with command-line bioinformatics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008645}, doi = {10.1371/JOURNAL.PCBI.1008645}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BrandiesH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BraultMR21, author = {Vincent Brault and Bastien Mallein and Jean{-}Fran{\c{c}}ois Rupprecht}, title = {Group testing as a strategy for {COVID-19} epidemiological monitoring and community surveillance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008726}, doi = {10.1371/JOURNAL.PCBI.1008726}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BraultMR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BraviBGWMMC21, author = {Barbara Bravi and Vinod P. Balachandran and Benjamin D. Greenbaum and Aleksandra M. Walczak and Thierry Mora and R{\'{e}}mi Monasson and Simona Cocco}, title = {Probing T-cell response by sequence-based probabilistic modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009297}, doi = {10.1371/JOURNAL.PCBI.1009297}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BraviBGWMMC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BridgefordWWXCD21, author = {Eric W. Bridgeford and Shangsi Wang and Zeyi Wang and Ting Xu and R. Cameron Craddock and Jayanta Dey and Gregory Kiar and William R. Gray Roncal and Carlo Colantuoni and Christopher Douville and Stephanie Noble and Carey E. Priebe and Brian Caffo and Michael P. Milham and Xi{-}Nian Zuo and Joshua T. Vogelstein}, title = {Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009279}, doi = {10.1371/JOURNAL.PCBI.1009279}, timestamp = {Mon, 30 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BridgefordWWXCD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BrownBSABSASSST21, author = {Jared Brown and Chris Barry and Matthew T. Schmitz and Cara Argus and Jennifer M. Bolin and Michael P. Schwartz and Amy Van Aartsen and John W. Steill and Scott Swanson and Ron M. Stewart and James A. Thomson and Christina Kendziorski}, title = {Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008778}, doi = {10.1371/JOURNAL.PCBI.1008778}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BrownBSABSASSST21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BrownCNKVAGG21, author = {Daril E. Brown II and Jairo I. Chavez and Derek H. Nguyen and Adam Kadwory and Bradley Voytek and Ezequiel M. Arneodo and Timothy Q. Gentner and Vikash Gilja}, title = {Local field potentials in a pre-motor region predict learned vocal sequences}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008100}, doi = {10.1371/JOURNAL.PCBI.1008100}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BrownCNKVAGG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BrownK21, author = {Aidan I. Brown and Elena F. Koslover}, title = {Design principles for the glycoprotein quality control pathway}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008654}, doi = {10.1371/JOURNAL.PCBI.1008654}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BrownK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BrysonBPG21, author = {Alexander Bryson and Samuel F. Berkovic and Steven Petrou and David B. Grayden}, title = {State transitions through inhibitory interneurons in a cortical network model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009521}, doi = {10.1371/JOURNAL.PCBI.1009521}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BrysonBPG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BudakGSCZB21, author = {Maral Budak and Karl Grosh and Aritra Sasmal and Gabriel Corfas and Michal Zochowski and Victoria Booth}, title = {Contrasting mechanisms for hidden hearing loss: Synaptopathy vs myelin defects}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008499}, doi = {10.1371/JOURNAL.PCBI.1008499}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BudakGSCZB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BudakGSCZB21a, author = {Maral Budak and Karl Grosh and Aritra Sasmal and Gabriel Corfas and Michal Zochowski and Victoria Booth}, title = {Correction: Contrasting mechanisms for hidden hearing loss: Synaptopathy vs myelin defects}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008910}, doi = {10.1371/JOURNAL.PCBI.1008910}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BudakGSCZB21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BuddeSWHU21, author = {Kai Budde and Jacob Smith and Pia Wilsdorf and Fiete Haack and Adelinde M. Uhrmacher}, title = {Relating simulation studies by provenance - Developing a family of Wnt signaling models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009227}, doi = {10.1371/JOURNAL.PCBI.1009227}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BuddeSWHU21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BuerenRNSVOKK21, author = {Nienke E. R. van Bueren and Thomas L. Reed and Vu Nguyen and James G. Sheffield and Sanne H. G. van der Ven and Michael A. Osborne and Evelyn H. Kroesbergen and Roi Cohen Kadosh}, title = {Personalized brain stimulation for effective neurointervention across participants}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008886}, doi = {10.1371/JOURNAL.PCBI.1008886}, timestamp = {Tue, 24 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BuerenRNSVOKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BurgCDWTBE21, author = {Max F. Burg and Santiago A. Cadena and George H. Denfield and Edgar Y. Walker and Andreas S. Tolias and Matthias Bethge and Alexander S. Ecker}, title = {Learning divisive normalization in primary visual cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009028}, doi = {10.1371/JOURNAL.PCBI.1009028}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BurgCDWTBE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BurnettDHPWABVW21, author = {Jessica Burnett and Renee Dale and Chung{-}Yi Hou and Gabriela Palomo{-}Mu{\~{n}}oz and Kaitlin Stack Whitney and Steve Aulenbach and Robert Sky Bristol and Denis Valle and Tristan P. Wellman}, title = {Ten simple rules for creating a scientific web application}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009574}, doi = {10.1371/JOURNAL.PCBI.1009574}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/BurnettDHPWABVW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/BurtonACBAE21, author = {Ross J. Burton and Raya Ahmed and Simone M. Cuff and Sarah Baker and Andreas Artemiou and Matthias Eberl}, title = {CytoPy: An autonomous cytometry analysis framework}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009071}, doi = {10.1371/JOURNAL.PCBI.1009071}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/BurtonACBAE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ByrneJOOHRWCSCC21, author = {Catherine M. Byrne and Christine Johnston and Jackson Orem and Fred Okuku and Meei{-}Li Huang and Habibur Rahman and Anna Wald and Lawrence Corey and Joshua T. Schiffer and Corey Casper and Daniel Coombs and Soren Gantt}, title = {Examining the dynamics of Epstein-Barr virus shedding in the tonsils and the impact of {HIV-1} coinfection on daily saliva viral loads}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009072}, doi = {10.1371/JOURNAL.PCBI.1009072}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ByrneJOOHRWCSCC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CadwalladerPGK21, author = {Lauren Cadwallader and Jason A. Papin and Feilim Mac Gabhann and Rebecca Kirk}, title = {Collaborating with our community to increase code sharing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008867}, doi = {10.1371/JOURNAL.PCBI.1008867}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CadwalladerPGK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CaiFSEPPG21, author = {Changjia Cai and Johannes Friedrich and Amrita Singh and M. Hossein Eybposh and Eftychios A. Pnevmatikakis and Kaspar Podgorski and Andrea Giovannucci}, title = {VolPy: Automated and scalable analysis pipelines for voltage imaging datasets}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008806}, doi = {10.1371/JOURNAL.PCBI.1008806}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CaiFSEPPG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CakanO21, author = {Caglar Cakan and Klaus Obermayer}, title = {Correction: Biophysically grounded mean-field models of neural populations under electrical stimulation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008717}, doi = {10.1371/JOURNAL.PCBI.1008717}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CakanO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CallanWH21, author = {Torrington Callan and Stephen Woodcock and Wilhelmina May Huston}, title = {Ascension of Chlamydia is moderated by uterine peristalsis and the neutrophil response to infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009365}, doi = {10.1371/JOURNAL.PCBI.1009365}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CallanWH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CallawayRG21, author = {Frederick Callaway and Antonio Rangel and Thomas L. Griffiths}, title = {Fixation patterns in simple choice reflect optimal information sampling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008863}, doi = {10.1371/JOURNAL.PCBI.1008863}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CallawayRG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CalvinR21, author = {Olivia L. Calvin and A. David Redish}, title = {Global disruption in excitation-inhibition balance can cause localized network dysfunction and Schizophrenia-like context-integration deficits}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008985}, doi = {10.1371/JOURNAL.PCBI.1008985}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CalvinR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Camacho-Aguilar21, author = {Elena Camacho{-}Aguilar and Aryeh Warmflash and David A. Rand}, title = {Quantifying cell transitions in C. elegans with data-fitted landscape models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009034}, doi = {10.1371/JOURNAL.PCBI.1009034}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Camacho-Aguilar21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CampanelloTSSL21, author = {Leonard Campanello and Maria K. Traver and Hari Shroff and Brian C. Schaefer and Wolfgang Losert}, title = {Signaling through polymerization and degradation: Analysis and simulations of {T} cell activation mediated by Bcl10}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007986}, doi = {10.1371/JOURNAL.PCBI.1007986}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CampanelloTSSL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CampbellBSKKCS21, author = {Ellsworth M. Campbell and Anthony Boyles and Anupama Shankar and Jay Kim and Sergey Knyazev and Roxana Cintron and William M. Switzer}, title = {MicrobeTrace: Retooling molecular epidemiology for rapid public health response}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009300}, doi = {10.1371/JOURNAL.PCBI.1009300}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CampbellBSKKCS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CandiaSAA21, author = {Antonio de Candia and Alessandro Sarracino and Ilenia Apicella and Lucilla de Arcangelis}, title = {Critical behaviour of the stochastic Wilson-Cowan model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008884}, doi = {10.1371/JOURNAL.PCBI.1008884}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CandiaSAA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CangWWCHN21, author = {Zixuan Cang and Yangyang Wang and Qixuan Wang and Ken W. Y. Cho and William R. Holmes and Qing Nie}, title = {A multiscale model via single-cell transcriptomics reveals robust patterning mechanisms during early mammalian embryo development}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008571}, doi = {10.1371/JOURNAL.PCBI.1008571}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CangWWCHN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Cannon21, author = {Jonathan Cannon}, title = {Expectancy-based rhythmic entrainment as continuous Bayesian inference}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009025}, doi = {10.1371/JOURNAL.PCBI.1009025}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Cannon21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Cannon21a, author = {Jonathan Cannon}, title = {Correction: Expectancy-based rhythmic entrainment as continuous Bayesian inference}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009692}, doi = {10.1371/JOURNAL.PCBI.1009692}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Cannon21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CaoNBLY21, author = {Yangxiaolu Cao and John Neu and Andrew E. Blanchard and Ting Lu and Lingchong You}, title = {Repulsive expansion dynamics in colony growth and gene expression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008168}, doi = {10.1371/JOURNAL.PCBI.1008168}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CaoNBLY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CarpenterZGSGBK21, author = {Charlie M. Carpenter and Weiming Zhang and Lucas A. Gillenwater and Cameron Severn and Tusharkanti Ghosh and Russell Bowler and Katerina J. Kechris and Debashis Ghosh}, title = {PaIRKAT: {A} pathway integrated regression-based kernel association test with applications to metabolomics and {COPD} phenotypes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008986}, doi = {10.1371/JOURNAL.PCBI.1008986}, timestamp = {Fri, 28 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CarpenterZGSGBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CarvalhoMCM21, author = {Vin{\'{\i}}cius R. Carvalho and M{\'{a}}rcio Fl{\'{a}}vio Dutra Moraes and Sydney S. Cash and Eduardo Mazoni Andrade Mar{\c{c}}al Mendes}, title = {Active probing to highlight approaching transitions to ictal states in coupled neural mass models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008377}, doi = {10.1371/JOURNAL.PCBI.1008377}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CarvalhoMCM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CasileFB21, author = {Antonino Casile and Rose T. Faghih and Emery N. Brown}, title = {Robust point-process Granger causality analysis in presence of exogenous temporal modulations and trial-by-trial variability in spike trains}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007675}, doi = {10.1371/JOURNAL.PCBI.1007675}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CasileFB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CassidyNRCA21, author = {Tyler Cassidy and Daniel Nichol and Mark Robertson{-}Tessi and Morgan Craig and Alexander R. A. Anderson}, title = {The role of memory in non-genetic inheritance and its impact on cancer treatment resistance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009348}, doi = {10.1371/JOURNAL.PCBI.1009348}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CassidyNRCA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Castellano-Escuder21, author = {Pol Castellano{-}Escuder and Ra{\'{u}}l Gonz{\'{a}}lez{-}Dom{\'{\i}}nguez and Francesc Carmona{-}Pontaque and Cristina Andres{-}Lacueva and Alex S{\'{a}}nchez{-}Pla}, title = {POMAShiny: {A} user-friendly web-based workflow for metabolomics and proteomics data analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009148}, doi = {10.1371/JOURNAL.PCBI.1009148}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Castellano-Escuder21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CastroB21, author = {Mario Castro and Rob J. De Boer}, title = {The limitations, dangers, and benefits of simple methods for testing identifiability}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009425}, doi = {10.1371/JOURNAL.PCBI.1009425}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CastroB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CavallaroMKM21, author = {Massimo Cavallaro and Haseeb Moiz and Matt J. Keeling and Noel D. McCarthy}, title = {Contrasting factors associated with COVID-19-related {ICU} admission and death outcomes in hospitalised patients by means of Shapley values}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009121}, doi = {10.1371/JOURNAL.PCBI.1009121}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CavallaroMKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CazellesCNCVR21, author = {Bernard Cazelles and Clara Champagne and Benjamin Nguyen{-}Van{-}Yen and Catherine Comiskey and Elisabeta Vergu and Benjamin Roche}, title = {A mechanistic and data-driven reconstruction of the time-varying reproduction number: Application to the {COVID-19} epidemic}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009211}, doi = {10.1371/JOURNAL.PCBI.1009211}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CazellesCNCVR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CecchiniSMCCAFL21, author = {Gloria Cecchini and Alessandro Scaglione and Anna Letizia Allegra Mascaro and Curzio Checcucci and Emilia Conti and Ihusan Adam and Duccio Fanelli and Roberto Livi and Francesco Saverio Pavone and Thomas Kreuz}, title = {Cortical propagation tracks functional recovery after stroke}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008963}, doi = {10.1371/JOURNAL.PCBI.1008963}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CecchiniSMCCAFL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChadwickSGRAWKB21, author = {Eric A. Chadwick and Takaya Suzuki and Michael G. George and David A. Romero and Cristina H. Amon and Thomas K. Waddell and Golnaz Karoubi and Aimy Bazylak}, title = {Vessel network extraction and analysis of mouse pulmonary vasculature via X-ray micro-computed tomographic imaging}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008930}, doi = {10.1371/JOURNAL.PCBI.1008930}, timestamp = {Tue, 08 Feb 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ChadwickSGRAWKB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChakravartyC21, author = {Suchana Chakravarty and Attila Csik{\'{a}}sz{-}Nagy}, title = {Systematic analysis of noise reduction properties of coupled and isolated feed-forward loops}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009622}, doi = {10.1371/JOURNAL.PCBI.1009622}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChakravartyC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChamperOSGCM21, author = {Samuel E. Champer and Nathan Oakes and Ronin Sharma and Pablo Garc{\'{\i}}a{-}D{\'{\i}}az and Jackson Champer and Philipp W. Messer}, title = {Modeling {CRISPR} gene drives for suppression of invasive rodents using a supervised machine learning framework}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009660}, doi = {10.1371/JOURNAL.PCBI.1009660}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChamperOSGCM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChanFMB21, author = {Dalen Chan and Christina M. Fitzsimmons and Mariana D. Mandler and Pedro J. Batista}, title = {Ten simple rules for acing virtual interviews}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009057}, doi = {10.1371/JOURNAL.PCBI.1009057}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChanFMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChandrasekharMA21, author = {Arjun Chandrasekhar and James A. R. Marshall and Cortnea Austin and Saket Navlakha and Deborah M. Gordon}, title = {Better tired than lost: Turtle ant trail networks favor coherence over short edges}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009523}, doi = {10.1371/JOURNAL.PCBI.1009523}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChandrasekharMA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CharmpiCJB21, author = {Konstantina Charmpi and Manopriya Chokkalingam and Ronja Johnen and Andreas Beyer}, title = {Optimizing network propagation for multi-omics data integration}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009161}, doi = {10.1371/JOURNAL.PCBI.1009161}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CharmpiCJB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CharnigaCMPOND21, author = {Kelly Charniga and Zulma M. Cucunub{\'{a}} and Marcela Mercado and Franklyn Prieto and Martha Ospina and Pierre Nouvellet and Christl A. Donnelly}, title = {Spatial and temporal invasion dynamics of the 2014-2017 Zika and chikungunya epidemics in Colombia}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009174}, doi = {10.1371/JOURNAL.PCBI.1009174}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CharnigaCMPOND21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CheloshkinaP21, author = {Kseniia Cheloshkina and Maria Poptsova}, title = {Comprehensive analysis of cancer breakpoints reveals signatures of genetic and epigenetic contribution to cancer genome rearrangements}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008749}, doi = {10.1371/JOURNAL.PCBI.1008749}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CheloshkinaP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChenAOSGMP21, author = {Ke Chen and Amitesh Anand and Connor A. Olson and Troy E. Sandberg and Ye Gao and Nathan Mih and Bernhard O. Palsson}, title = {Bacterial fitness landscapes stratify based on proteome allocation associated with discrete aero-types}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008596}, doi = {10.1371/JOURNAL.PCBI.1008596}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChenAOSGMP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChenFWA21, author = {Siyu Chen and Jennifer A. Flegg and Lisa J. White and Ricardo Aguas}, title = {Levels of SARS-CoV-2 population exposure are considerably higher than suggested by seroprevalence surveys}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009436}, doi = {10.1371/JOURNAL.PCBI.1009436}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChenFWA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChenLCVZP21, author = {Shuonan Chen and Jackson Loper and Xiaoyin Chen and Alex Vaughan and Anthony M. Zador and Liam Paninski}, title = {BARcode DEmixing through Non-negative Spatial Regression (BarDensr)}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008256}, doi = {10.1371/JOURNAL.PCBI.1008256}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChenLCVZP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChenNHCX21, author = {Xi Chen and Andrew F. Neuwald and Leena Hilakivi{-}Clarke and Robert Clarke and Jianhua Xuan}, title = {ChIP-GSM: Inferring active transcription factor modules to predict functional regulatory elements}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009203}, doi = {10.1371/JOURNAL.PCBI.1009203}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChenNHCX21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChenXX21, author = {Daipeng Chen and Yuyi Xue and Yanni Xiao}, title = {Determining travel fluxes in epidemic areas}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009473}, doi = {10.1371/JOURNAL.PCBI.1009473}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChenXX21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CherianKM21, author = {Philip Cherian and Sandeep Krishna and Gautam I. Menon}, title = {Optimizing testing for {COVID-19} in India}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009126}, doi = {10.1371/JOURNAL.PCBI.1009126}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CherianKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChintaluriBSCDJ21, author = {Chaitanya Chintaluri and Marta Bejtka and Wladyslaw Sredniawa and Michal Czerwinski and Jakub M. Dzik and Joanna Jedrzejewska{-}Szmek and Kacper Kondrakiewicz and Ewa Kublik and Daniel K. W{\'{o}}jcik}, title = {What we can and what we cannot see with extracellular multielectrodes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008615}, doi = {10.1371/JOURNAL.PCBI.1008615}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ChintaluriBSCDJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChiuN21, author = {Weihsueh A. Chiu and Martial Ndeffo{-}Mbah}, title = {Using test positivity and reported case rates to estimate state-level {COVID-19} prevalence and seroprevalence in the United States}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009374}, doi = {10.1371/JOURNAL.PCBI.1009374}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChiuN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChizhovG21, author = {Anton V. Chizhov and Lyle J. Graham}, title = {A strategy for mapping biophysical to abstract neuronal network models applied to primary visual cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009007}, doi = {10.1371/JOURNAL.PCBI.1009007}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ChizhovG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChouS21, author = {Kenny F. Chou and Kamal Sen}, title = {{AIM:} {A} network model of attention in auditory cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009356}, doi = {10.1371/JOURNAL.PCBI.1009356}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChouS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChristyGLW21, author = {Thomas W. Christy and Catherine A. Giannetti and Alain Laederach and Kevin M. Weeks}, title = {Identifying proximal {RNA} interactions from cDNA-encoded crosslinks with ShapeJumper}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009632}, doi = {10.1371/JOURNAL.PCBI.1009632}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChristyGLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChrysaitisJDS21, author = {Nikitas Angeletos Chrysaitis and Renaud Jardri and Sophie Den{\`{e}}ve and Peggy Seri{\`{e}}s}, title = {No increased circular inference in adults with high levels of autistic traits or autism}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009006}, doi = {10.1371/JOURNAL.PCBI.1009006}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChrysaitisJDS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChuMCNTSLP21, author = {Eric Ching{-}Pan Chu and Alexander Morin and Tak Hou Calvin Chang and Tue Nguyen and Yi{-}Cheng Tsai and Aman Sharma and Chao Chun Liu and Paul Pavlidis}, title = {Experiment level curation of transcriptional regulatory interactions in neurodevelopment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009484}, doi = {10.1371/JOURNAL.PCBI.1009484}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChuMCNTSLP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChuW21, author = {Wen{-}Ting Chu and Jin Wang}, title = {Thermodynamic and sequential characteristics of phase separation and droplet formation for an intrinsically disordered region/protein ensemble}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008672}, doi = {10.1371/JOURNAL.PCBI.1008672}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ChuW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ChuW21a, author = {Xiakun Chu and Jin Wang}, title = {Deciphering the molecular mechanism of the cancer formation by chromosome structural dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009596}, doi = {10.1371/JOURNAL.PCBI.1009596}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ChuW21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CiavarellaF21, author = {Constanze Ciavarella and Neil M. Ferguson}, title = {Deriving fine-scale models of human mobility from aggregated origin-destination flow data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008588}, doi = {10.1371/JOURNAL.PCBI.1008588}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CiavarellaF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Civantos-GomezG21, author = {Ic{\'{\i}}ar Civantos{-}G{\'{o}}mez and Javier Garc{\'{\i}}a{-}Algarra and David Garc{\'{\i}}a{-}Callejas and Javier Galeano and Oscar Godoy and Ignasi Bartomeus}, title = {Fine scale prediction of ecological community composition using a two-step sequential Machine Learning ensemble}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008906}, doi = {10.1371/JOURNAL.PCBI.1008906}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Civantos-GomezG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Climente-Gonzalez21, author = {H{\'{e}}ctor Climente{-}Gonz{\'{a}}lez and Christine Lonjou and Fabienne Lesueur and GENESIS study group and Dominique Stoppa{-}Lyonnet and Nadine Andrieu and Chlo{\'{e}}{-}Agathe Azencott}, title = {Boosting {GWAS} using biological networks: {A} study on susceptibility to familial breast cancer}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008819}, doi = {10.1371/JOURNAL.PCBI.1008819}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Climente-Gonzalez21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CodyEOP21, author = {Jonathan W. Cody and Amy L. Ellis{-}Connell and Shelby L. O'Connor and Elsje Pienaar}, title = {Mathematical modeling of {N-803} treatment in SIV-infected non-human primates}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009204}, doi = {10.1371/JOURNAL.PCBI.1009204}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CodyEOP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ColeDLMV21, author = {Casey A. Cole and Nourhan S. Daigham and Gaohua Liu and Gaetano T. Montelione and Homayoun Valafar}, title = {{REDCRAFT:} {A} computational platform using residual dipolar coupling {NMR} data for determining structures of perdeuterated proteins in solution}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008060}, doi = {10.1371/JOURNAL.PCBI.1008060}, timestamp = {Mon, 01 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ColeDLMV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ConnolleySKM21, author = {Lara Connolley and Joanna Szczepaniak and Colin Kleanthous and Se{\'{a}}n M. Murray}, title = {The quantitative basis for the redistribution of immobile bacterial lipoproteins to division septa}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009756}, doi = {10.1371/JOURNAL.PCBI.1009756}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ConnolleySKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ConteCS21, author = {Martina Conte and Sergio Casas{-}Tint{\`{o}} and Juan Soler}, title = {Modeling invasion patterns in the glioblastoma battlefield}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008632}, doi = {10.1371/JOURNAL.PCBI.1008632}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ConteCS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ContrerasSGS21, author = {Susana Andrea Contreras and Jan{-}Hendrik Schleimer and Allan T. Gulledge and Susanne Schreiber}, title = {Activity-mediated accumulation of potassium induces a switch in firing pattern and neuronal excitability type}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008510}, doi = {10.1371/JOURNAL.PCBI.1008510}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ContrerasSGS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CookPE21, author = {Jacob Cook and Samraat Pawar and Robert G. Endres}, title = {Thermodynamic constraints on the assembly and diversity of microbial ecosystems are different near to and far from equilibrium}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009643}, doi = {10.1371/JOURNAL.PCBI.1009643}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CookPE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Coronel-Oliveros21, author = {Carlos Coronel{-}Oliveros and Rodrigo Cofr{\'{e}} and Patricio Orio}, title = {Cholinergic neuromodulation of inhibitory interneurons facilitates functional integration in whole-brain models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008737}, doi = {10.1371/JOURNAL.PCBI.1008737}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Coronel-Oliveros21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CotmanBRPD21, author = {Zachary J. Cotman and Michael J. Bowden and Barrett P. Richter and Joseph H. Phelps and Christopher J. Dibble}, title = {Factors affecting aerosol SARS-CoV-2 transmission via {HVAC} systems; a modeling study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009474}, doi = {10.1371/JOURNAL.PCBI.1009474}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CotmanBRPD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CoventryB21, author = {Brian Coventry and David Baker}, title = {Protein sequence optimization with a pairwise decomposable penalty for buried unsatisfied hydrogen bonds}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008061}, doi = {10.1371/JOURNAL.PCBI.1008061}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CoventryB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CoxGMM21, author = {Simon J. D. Cox and Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and Barbara Magagna and Maria{-}Cristina V. Marinescu}, title = {Ten simple rules for making a vocabulary {FAIR}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009041}, doi = {10.1371/JOURNAL.PCBI.1009041}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CoxGMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CoyBPS21, author = {Rachel Coy and Maxime Berg and James B. Phillips and Rebecca J. Shipley}, title = {Modelling-informed cell-seeded nerve repair construct designs for treating peripheral nerve injuries}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009142}, doi = {10.1371/JOURNAL.PCBI.1009142}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CoyBPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CraftBGSL21, author = {Michelle F. Craft and Andrea K. Barreiro and Shree Hari Gautam and Woodrow L. Shew and Cheng Ly}, title = {Differences in olfactory bulb mitral cell spiking with ortho- and retronasal stimulation revealed by data-driven models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009169}, doi = {10.1371/JOURNAL.PCBI.1009169}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CraftBGSL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CrestaWQSLSB21, author = {Daniel Cresta and Donald C. Warren and Christian Quirouette and Amanda P. Smith and Lindey C. Lane and Amber M. Smith and Catherine A. A. Beauchemin}, title = {Time to revisit the endpoint dilution assay and to replace the {TCID50} as a measure of a virus sample's infection concentration}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009480}, doi = {10.1371/JOURNAL.PCBI.1009480}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CrestaWQSLSB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CrodelleM21, author = {Jennifer Crodelle and David W. McLaughlin}, title = {Modeling the role of gap junctions between excitatory neurons in the developing visual cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007915}, doi = {10.1371/JOURNAL.PCBI.1007915}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CrodelleM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CrowleyKKLPLN21, author = {George Crowley and James Kim and Sophia Kwon and Rachel Lam and David J. Prezant and Mengling Liu and Anna Nolan}, title = {PEDF, a pleiotropic {WTC-LI} biomarker: Machine learning biomarker identification and validation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009144}, doi = {10.1371/JOURNAL.PCBI.1009144}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CrowleyKKLPLN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CrumpHKSBMSKR21, author = {Ronald E. Crump and Ching{-}I Huang and Edward S. Knock and Simon E. F. Spencer and Paul E. Brown and Erick Mwamba Miaka and Chansy Shampa and Matt J. Keeling and Kat S. Rock}, title = {Quantifying epidemiological drivers of gambiense human African Trypanosomiasis across the Democratic Republic of Congo}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008532}, doi = {10.1371/JOURNAL.PCBI.1008532}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CrumpHKSBMSKR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CunniffeTHJ21, author = {Nik J. Cunniffe and Nick P. Taylor and Fr{\'{e}}d{\'{e}}ric M. Hamelin and Michael J. Jeger}, title = {Epidemiological and ecological consequences of virus manipulation of host and vector in plant virus transmission}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009759}, doi = {10.1371/JOURNAL.PCBI.1009759}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/CunniffeTHJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/CzupponDGTPGB21, author = {Peter Czuppon and Florence D{\'{e}}barre and Ant{\'{o}}nio Gon{\c{c}}alves and Olivier Tenaillon and Alan S. Perelson and J{\'{e}}r{\'{e}}mie Guedj and Fran{\c{c}}ois Blanquart}, title = {Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008752}, doi = {10.1371/JOURNAL.PCBI.1008752}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CzupponDGTPGB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Dalvi-GarciaFVH21, author = {Felipe Dalvi{-}Garcia and Lu{\'{\i}}s L. Fonseca and Ana Tereza Ribeiro de Vasconcelos and Cecilia Hedin{-}Pereira and Eberhard O. Voit}, title = {A model of dopamine and serotonin-kynurenine metabolism in cortisolemia: Implications for depression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008956}, doi = {10.1371/JOURNAL.PCBI.1008956}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Dalvi-GarciaFVH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DamgenB21, author = {Marc A. D{\"{a}}mgen and Philip C. Biggin}, title = {State-dependent protein-lipid interactions of a pentameric ligand-gated ion channel in a neuronal membrane}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007856}, doi = {10.1371/JOURNAL.PCBI.1007856}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DamgenB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DammeHVMBB21, author = {Renaud Van Damme and Martin H{\"{o}}lzer and Adrian Viehweger and Bettina M{\"{u}}ller and Erik Bongcam{-}Rudloff and Christian Brandt}, title = {Metagenomics workflow for hybrid assembly, differential coverage binning, metatranscriptomics and pathway analysis {(MUFFIN)}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008716}, doi = {10.1371/JOURNAL.PCBI.1008716}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DammeHVMBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DaoudaDFBPCBHTM21, author = {Tariq Daouda and Maude Dumont{-}Lagac{\'{e}} and Albert Feghaly and Yahya Benslimane and R{\'{e}}becca Panes and Mathieu Courcelles and Mohamed Benhammadi and Lea Harrington and Pierre Thibault and Fran{\c{c}}ois Major and Yoshua Bengio and Etienne Gagnon and S{\'{e}}bastien Lemieux and Claude Perreault}, title = {{CAMAP:} Artificial neural networks unveil the role of codon arrangement in modulating {MHC-I} peptides presentation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009482}, doi = {10.1371/JOURNAL.PCBI.1009482}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DaoudaDFBPCBHTM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DattaFBWMS21, author = {Arghya Datta and Noah R. Flynn and Dustyn A. Barnette and Keith F. Woeltje and Grover P. Miller and S. Joshua Swamidass}, title = {Machine learning liver-injuring drug interactions with non-steroidal anti-inflammatory drugs (NSAIDs) from a retrospective electronic health record {(EHR)} cohort}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009053}, doi = {10.1371/JOURNAL.PCBI.1009053}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DattaFBWMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DattnerGKYGMZSH21, author = {Itai Dattner and Yair Goldberg and Guy Katriel and Rami Yaari and Nurit Gal and Yoav Miron and Arnona Ziv and Rivka Sheffer and Yoram Hamo and Amit Huppert}, title = {The role of children in the spread of {COVID-19:} Using household data from Bnei Brak, Israel, to estimate the relative susceptibility and infectivity of children}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008559}, doi = {10.1371/JOURNAL.PCBI.1008559}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DattnerGKYGMZSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DeMaereD21, author = {Matthew Z. DeMaere and Aaron E. Darling}, title = {qc3C: Reference-free quality control for Hi-C sequencing data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008839}, doi = {10.1371/JOURNAL.PCBI.1008839}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DeMaereD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DearloveTOLLSBO21, author = {Bethany L. Dearlove and Sodsai Tovanabutra and Christopher L. Owen and Eric Lewitus and Yifan Li and Eric Sanders{-}Buell and Meera Bose and Anne{-}Marie O'Sullivan and Gustavo Kijak and Shana Miller and Kultida Poltavee and Jenica Lee and Lydia Bonar and Elizabeth Harbolick and Bahar Ahani and Phuc Pham and Hannah Kibuuka and Lucas Maganga and Sorachai Nitayaphan and Fred K. Sawe and Jerome H. Kim and Leigh Anne Eller and Sandhya Vasan and Robert Gramzinski and Nelson L. Michael and Merlin L. Robb and Morgane Rolland and RV217 Study Team}, title = {Factors influencing estimates of {HIV-1} infection timing using {BEAST}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008537}, doi = {10.1371/JOURNAL.PCBI.1008537}, timestamp = {Fri, 04 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DearloveTOLLSBO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DecrulleFMBLGL21, author = {Antoine L. Decrulle and Antoine Fr{\'{e}}noy and Thomas A. Meiller{-}Legrand and Aude Bernheim and Chantal Lotton and Arnaud Gutierrez and Ariel B. Lindner}, title = {Engineering gene overlaps to sustain genetic constructs in vivo}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009475}, doi = {10.1371/JOURNAL.PCBI.1009475}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DecrulleFMBLGL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DehaeneCP21, author = {Guillaume P. Dehaene and Ruben Coen Cagli and Alexandre Pouget}, title = {Investigating the representation of uncertainty in neuronal circuits}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008138}, doi = {10.1371/JOURNAL.PCBI.1008138}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DehaeneCP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DehghaniDK21, author = {Mohammad Ali Dehghani and Amir Hossein Darooneh and Mohammad Kohandel}, title = {The network structure affects the fixation probability when it couples to the birth-death dynamics in finite population}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009537}, doi = {10.1371/JOURNAL.PCBI.1009537}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DehghaniDK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DemsarZ21, author = {Janez Demsar and Blaz Zupan}, title = {Hands-on training about overfitting}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008671}, doi = {10.1371/JOURNAL.PCBI.1008671}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DemsarZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DeneuSBBMJ21, author = {Benjamin Deneu and Maximilien Servajean and Pierre Bonnet and Christophe Botella and Fran{\c{c}}ois Munoz and Alexis Joly}, title = {Convolutional neural networks improve species distribution modelling by capturing the spatial structure of the environment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008856}, doi = {10.1371/JOURNAL.PCBI.1008856}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DeneuSBBMJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DengP21, author = {Yangqing Deng and Wei Pan}, title = {Model checking via testing for direct effects in Mendelian Randomization and transcriptome-wide association studies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009266}, doi = {10.1371/JOURNAL.PCBI.1009266}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DengP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DerrickWCT21, author = {Daniel J. A. Derrick and Kathryn Wolton and Richard A. Currie and Marcus John Tindall}, title = {A mathematical model of the role of aggregation in sonic hedgehog signalling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008562}, doi = {10.1371/JOURNAL.PCBI.1008562}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DerrickWCT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DeutschNSH21, author = {Andreas Deutsch and Josu{\'{e}} Manik Nava{-}Sede{\~{n}}o and Simon Syga and Haralampos Hatzikirou}, title = {{BIO-LGCA:} {A} cellular automaton modelling class for analysing collective cell migration}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009066}, doi = {10.1371/JOURNAL.PCBI.1009066}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DeutschNSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DevlinMO21, author = {Sean M. Devlin and Axel Martin and Irina Ostrovnaya}, title = {Identifying prognostic pairwise relationships among bacterial species in microbiome studies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009501}, doi = {10.1371/JOURNAL.PCBI.1009501}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DevlinMO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Diaz-ColungaD21, author = {Juan Diaz{-}Colunga and Ram{\'{o}}n D{\'{\i}}az{-}Uriarte}, title = {Conditional prediction of consecutive tumor evolution using cancer progression models: What genotype comes next?}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009055}, doi = {10.1371/JOURNAL.PCBI.1009055}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Diaz-ColungaD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DiegmillerZGBAS21, author = {Rocky Diegmiller and Lun Zhang and Marcio Gameiro and Justinn Barr and Jasmin Imran Alsous and Paul Schedl and Stanislav Y. Shvartsman and Konstantin Mischaikow}, title = {Mapping parameter spaces of biological switches}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008711}, doi = {10.1371/JOURNAL.PCBI.1008711}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DiegmillerZGBAS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DiemerHGMK21, author = {Jorin Diemer and Jens Hahn and Bj{\"{o}}rn Goldenbogen and Karin M{\"{u}}ller and Edda Klipp}, title = {Sperm migration in the genital tract - In silico experiments identify key factors for reproductive success}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009109}, doi = {10.1371/JOURNAL.PCBI.1009109}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DiemerHGMK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Dill-McFarlandK21, author = {Kimberly A. Dill{-}McFarland and Stephan G. K{\"{o}}nig and Florent Mazel and David C. Oliver and Lisa M. McEwen and Kris Y. Hong and Steven J. Hallam}, title = {An integrated, modular approach to data science education in microbiology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008661}, doi = {10.1371/JOURNAL.PCBI.1008661}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Dill-McFarlandK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DillonBABBBDDEE21, author = {Matthew R. Dillon and Evan Bolyen and Anja Adamov and Aeriel Belk and Emily Borsom and Zachary Burcham and Justine W. Debelius and Heather Deel and Alex Emmons and Mehrbod Estaki and Chloe Herman and Christopher R. Keefe and Jamie T. Morton and Renato R. M. Oliveira and Andrew Sanchez and Anthony Simard and Yoshiki Vazquez{-}Baeza and Michal Ziemski and Hazuki E. Miwa and Terry A. Kerere and Carline Coote and Richard Bonneau and Rob Knight and Guilherme Oliveira and Piraveen Gopalasingam and Benjamin D. Kaehler and Emily K. Cope and Jessica L. Metcalf and Michael S. Robeson II and Nicholas A. Bokulich and J. Gregory Caporaso}, title = {Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009056}, doi = {10.1371/JOURNAL.PCBI.1009056}, timestamp = {Sun, 28 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DillonBABBBDDEE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DingHKFMNGSDSTE21, author = {Jun Ding and David Earl Hostallero and Mohamed Reda El Khili and Gregory Joseph Fonseca and Simon Milette and Nuzha Noorah and Myriam Guay{-}Belzile and Jonathan Spicer and Noriko Daneshtalab and Martin Sirois and Karine Tremblay and Amin Emad and Simon Rousseau}, title = {A network-informed analysis of SARS-CoV-2 and hemophagocytic lymphohistiocytosis genes' interactions points to Neutrophil extracellular traps as mediators of thrombosis in {COVID-19}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008810}, doi = {10.1371/JOURNAL.PCBI.1008810}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DingHKFMNGSDSTE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DixonMWIC21, author = {Tanner C. Dixon and Christina M. Merrick and Joni D. Wallis and Richard B. Ivry and Jose M. Carmena}, title = {Hybrid dedicated and distributed coding in PMd/M1 provides separation and interaction of bilateral arm signals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009615}, doi = {10.1371/JOURNAL.PCBI.1009615}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DixonMWIC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DockenCL21, author = {Steffen S. Docken and Colleen E. Clancy and Timothy J. Lewis}, title = {Rate-dependent effects of lidocaine on cardiac dynamics: Development and analysis of a low-dimensional drug-channel interaction model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009145}, doi = {10.1371/JOURNAL.PCBI.1009145}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DockenCL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DoganGBKABMC21, author = {Tunca Dogan and Ece Akhan G{\"{u}}zelcan and Marcus Baumann and Altay Koyas and Heval Atas and Ian R. Baxendale and Maria Jesus Martin and Reng{\"{u}}l {\c{C}}etin{-}Atalay}, title = {Protein domain-based prediction of drug/compound-target interactions and experimental validation on {LIM} kinases}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009171}, doi = {10.1371/JOURNAL.PCBI.1009171}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DoganGBKABMC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Dominey21, author = {Peter Ford Dominey}, title = {Narrative event segmentation in the cortical reservoir}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008993}, doi = {10.1371/JOURNAL.PCBI.1008993}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Dominey21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DorelKMTBMNZSHB21, author = {Mathurin Dorel and Bertram Klinger and Tommaso Mari and Joern Toedling and Eric Blanc and Clemens Messerschmidt and Michal Nadler{-}Holly and Matthias Ziehm and Anja Sieber and Falk Hertwig and Dieter Beule and Angelika Eggert and Johannes H. Schulte and Matthias Selbach and Nils Bl{\"{u}}thgen}, title = {Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009515}, doi = {10.1371/JOURNAL.PCBI.1009515}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DorelKMTBMNZSHB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DotanS21, author = {Aviv Dotan and Oren Shriki}, title = {Tinnitus-like "hallucinations" elicited by sensory deprivation in an entropy maximization recurrent neural network}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008664}, doi = {10.1371/JOURNAL.PCBI.1008664}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DotanS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DouglasZB21, author = {Jordan Douglas and Rong Zhang and Remco R. Bouckaert}, title = {Adaptive dating and fast proposals: Revisiting the phylogenetic relaxed clock model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008322}, doi = {10.1371/JOURNAL.PCBI.1008322}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DouglasZB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DovrolisKKKVK21, author = {Nikolas Dovrolis and Katerina Kassela and Konstantinos Konstantinidis and Adamantia Kouvela and Stavroula Veletza and Ioannis Karakasiliotis}, title = {{ZWA:} Viral genome assembly and characterization hindrances from virus-host chimeric reads; a refining approach}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009304}, doi = {10.1371/JOURNAL.PCBI.1009304}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DovrolisKKKVK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DownieMMG21, author = {Alexander E. Downie and Andreas Mayer and C. Jessica E. Metcalf and Andrea L. Graham}, title = {Optimal immune specificity at the intersection of host life history and parasite epidemiology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009714}, doi = {10.1371/JOURNAL.PCBI.1009714}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DownieMMG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DreosSMIBJ21, author = {Ren{\'{e}} Dreos and Anna Sloutskin and Nati Malachi and Diana Ideses and Philipp Bucher and Tamar Juven{-}Gershon}, title = {Computational identification and experimental characterization of preferred downstream positions in human core promoters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009256}, doi = {10.1371/JOURNAL.PCBI.1009256}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DreosSMIBJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DuanCDGHKLLLMMM21, author = {Qibin Duan and Chris Carmody and Basil Donovan and Rebecca J. Guy and Ben B. Hui and John M. Kaldor and Monica M. Lahra and Matthew G. Law and David A. Lewis and Michael Maley and Skye McGregor and Anna M. McNulty and Christine Selvey and David J. Templeton and David M. Whiley and David G. Regan and James G. Wood}, title = {Modelling response strategies for controlling gonorrhoea outbreaks in men who have sex with men in Australia}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009385}, doi = {10.1371/JOURNAL.PCBI.1009385}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DuanCDGHKLLLMMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DuanGGHXHSWDJZJ21, author = {Ran Duan and Lin Gao and Yong Gao and Yuxuan Hu and Han Xu and Mingfeng Huang and Kuo Song and Hongda Wang and Yongqiang Dong and Chaoqun Jiang and Chenxing Zhang and Songwei Jia}, title = {Evaluation and comparison of multi-omics data integration methods for cancer subtyping}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009224}, doi = {10.1371/JOURNAL.PCBI.1009224}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DuanGGHXHSWDJZJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DuboisPBGL21, author = {Thibault Dubois and Cristian Pasquaretta and Andrew B. Barron and Jacques Gautrais and Mathieu Lihoreau}, title = {A model of resource partitioning between foraging bees based on learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009260}, doi = {10.1371/JOURNAL.PCBI.1009260}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DuboisPBGL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DuchetGWTKBBB21, author = {Benoit Duchet and Filippo Ghezzi and Gihan Weerasinghe and Gerd Tinkhauser and Andrea A. K{\"{u}}hn and Peter Brown and Christian Bick and Rafal Bogacz}, title = {Average beta burst duration profiles provide a signature of dynamical changes between the {ON} and {OFF} medication states in Parkinson's disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009116}, doi = {10.1371/JOURNAL.PCBI.1009116}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DuchetGWTKBBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DurairajMBBRD21, author = {Janani Durairaj and Elena Melillo and Harro J. Bouwmeester and Jules Beekwilder and Dick de Ridder and Aalt D. J. van Dijk}, title = {Integrating structure-based machine learning and co-evolution to investigate specificity in plant sesquiterpene synthases}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008197}, doi = {10.1371/JOURNAL.PCBI.1008197}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DurairajMBBRD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Durand21, author = {Marc Durand}, title = {Large-scale simulations of biological cell sorting driven by differential adhesion follow diffusion-limited domain coalescence regime}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008576}, doi = {10.1371/JOURNAL.PCBI.1008576}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Durand21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DuttaGKP21, author = {Ritabrata Dutta and Susana N. Gomes and Dante Kalise and Lorenzo Pacchiardi}, title = {Using mobility data in the design of optimal lockdown strategies for the {COVID-19} pandemic}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009236}, doi = {10.1371/JOURNAL.PCBI.1009236}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DuttaGKP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DvorkinLL21, author = {Shirit Dvorkin and Reut Levi and Yoram Louzoun}, title = {Autoencoder based local {T} cell repertoire density can be used to classify samples and {T} cell receptors}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009225}, doi = {10.1371/JOURNAL.PCBI.1009225}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DvorkinLL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DwivediBCR21, author = {Kshitij Dwivedi and Michael F. Bonner and Radoslaw Martin Cichy and Gemma Roig}, title = {Unveiling functions of the visual cortex using task-specific deep neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009267}, doi = {10.1371/JOURNAL.PCBI.1009267}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DwivediBCR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DwivedyMACKTBSM21, author = {Abhisek Dwivedy and Richard Mariadasse and Mohammed Ahmad and Sayan Chakraborty and Deepsikha Kar and Satish Tiwari and Sankar Bhattacharyya and Sudipta Sonar and Shailendra Mani and Prafullakumar Tailor and Tanmay Majumdar and Jeyaraman Jeyakanthan and Bichitra Kumar Biswal}, title = {Characterization of the NiRAN domain from RNA-dependent {RNA} polymerase provides insights into a potential therapeutic target against SARS-CoV-2}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009384}, doi = {10.1371/JOURNAL.PCBI.1009384}, timestamp = {Tue, 28 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/DwivedyMACKTBSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/DwuletBB21, author = {JaeAnn M. Dwulet and Jennifer K. Briggs and Richard K. P. Benninger}, title = {Small subpopulations of {\(\beta\)}-cells do not drive islet oscillatory [Ca2+] dynamics via gap junction communication}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008948}, doi = {10.1371/JOURNAL.PCBI.1008948}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/DwuletBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EdgarFGB21, author = {Lowell T. Edgar and Claudio A. Franco and Holger Gerhardt and Miguel O. Bernabeu}, title = {On the preservation of vessel bifurcations during flow-mediated angiogenic remodelling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007715}, doi = {10.1371/JOURNAL.PCBI.1007715}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EdgarFGB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EhrhartE21, author = {Friederike Ehrhart and Chris T. A. Evelo}, title = {Ten simple rules to make your publication look better}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008938}, doi = {10.1371/JOURNAL.PCBI.1008938}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EhrhartE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/El-BouriMJGP21, author = {Wahbi K. El{-}Bouri and Andrew MacGowan and Tam{\'{a}}s I. J{\'{o}}zsa and Matthew J. Gounis and Stephen J. Payne}, title = {Modelling the impact of clot fragmentation on the microcirculation after thrombectomy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008515}, doi = {10.1371/JOURNAL.PCBI.1008515}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/El-BouriMJGP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EldjarnRHDSRDWR21, author = {Gr{\'{\i}}mur Hj{\"{o}}rleifsson Eldj{\'{a}}rn and Andrew Ramsay and Justin J. J. van der Hooft and Katherine R. Duncan and Sylvia Soldatou and Juho Rousu and R{\'{o}}n{\'{a}}n Daly and Joe Wandy and Simon Rogers}, title = {Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008920}, doi = {10.1371/JOURNAL.PCBI.1008920}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EldjarnRHDSRDWR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EnachescuSSC21, author = {Vince Enachescu and Paul R. Schrater and Stefan Schaal and Vassilios N. Christopoulos}, title = {Action planning and control under uncertainty emerge through a desirability-driven competition between parallel encoding motor plans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009429}, doi = {10.1371/JOURNAL.PCBI.1009429}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EnachescuSSC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ErdemLTL21, author = {Cemal Erdem and Adrian V. Lee and D. Lansing Taylor and Timothy R. Lezon}, title = {Inhibition of {RPS6K} reveals context-dependent Akt activity in luminal breast cancer cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009125}, doi = {10.1371/JOURNAL.PCBI.1009125}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ErdemLTL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Erdemci-Tandogan21, author = {Gonca Erdemci{-}Tandogan and M. Lisa Manning}, title = {Effect of cellular rearrangement time delays on the rheology of vertex models for confluent tissues}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009049}, doi = {10.1371/JOURNAL.PCBI.1009049}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Erdemci-Tandogan21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ErdosSAOLABAR21, author = {Bal{\'{a}}zs Erdos and Bart van Sloun and Michiel E. Adriaens and Shauna D. O'Donovan and Dominique Langin and Arne Astrup and Ellen E. Blaak and Ilja C. W. Arts and Natal A. W. van Riel}, title = {Personalized computational model quantifies heterogeneity in postprandial responses to oral glucose challenge}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008852}, doi = {10.1371/JOURNAL.PCBI.1008852}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ErdosSAOLABAR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ErnstCBGW21, author = {Udo A. Ernst and Xiao Chen and Lisa Bohnenkamp and Fingal Orlando Galashan and Detlef Wegener}, title = {Dynamic divisive normalization circuits explain and predict change detection in monkey area {MT}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009595}, doi = {10.1371/JOURNAL.PCBI.1009595}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ErnstCBGW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EsenerMGLGBD21, author = {Necati Esener and Alexandre Maciel{-}Guerra and Katharina Giebel and Daniel Lea and Martin J. Green and Andrew J. Bradley and Tania Dottorini}, title = {Mass spectrometry and machine learning for the accurate diagnosis of benzylpenicillin and multidrug resistance of Staphylococcus aureus in bovine mastitis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009108}, doi = {10.1371/JOURNAL.PCBI.1009108}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EsenerMGLGBD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EspinozaDOBMSMC21, author = {Josh L. Espinoza and Chris L. Dupont and Aubrie O'Rourke and Sinem Beyhan and Pavel Morales and Amy Spoering and Kirsten J. Meyer and Agnes P. Chan and Yongwook Choi and William C. Nierman and Kim Lewis and Karen E. Nelson}, title = {Predicting antimicrobial mechanism-of-action from transcriptomes: {A} generalizable explainable artificial intelligence approach}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008857}, doi = {10.1371/JOURNAL.PCBI.1008857}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EspinozaDOBMSMC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EstabrookTPH21, author = {Ian D. Estabrook and Hawa Racine Thiam and Matthieu Piel and Rhoda J. Hawkins}, title = {Calculation of the force field required for nucleus deformation during cell migration through constrictions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008592}, doi = {10.1371/JOURNAL.PCBI.1008592}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EstabrookTPH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EstradaIRLTH21, author = {Ana C. Estrada and Linda Irons and Bruno V. Rego and Guangxin Li and George Tellides and Jay D. Humphrey}, title = {Roles of mTOR in thoracic aortopathy understood by complex intracellular signaling interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009683}, doi = {10.1371/JOURNAL.PCBI.1009683}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EstradaIRLTH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EwaldRRSBK21, author = {Jan Ewald and Flora Rivieccio and Luk{\'{a}}s Radosa and Stefan Schuster and Axel A. Brakhage and Christoph Kaleta}, title = {Dynamic optimization reveals alveolar epithelial cells as key mediators of host defense in invasive aspergillosis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009645}, doi = {10.1371/JOURNAL.PCBI.1009645}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EwaldRRSBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/EyreLWCWP21, author = {David W. Eyre and Mirjam Laager and A. Sarah Walker and Ben S. Cooper and Daniel J. Wilson}, title = {Probabilistic transmission models incorporating sequencing data for healthcare-associated Clostridioides difficile outperform heuristic rules and identify strain-specific differences in transmission}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008417}, doi = {10.1371/JOURNAL.PCBI.1008417}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/EyreLWCWP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FamulareWHPSAAI21, author = {Michael Famulare and Wesley Wong and Rashidul Haque and James A. Platts{-}Mills and Parimalendu Saha and Asma B. Aziz and Tahmina Ahmed and Md Ohedul Islam and Md Jashim Uddin and Ananda S. Bandyopadhyay and Mohammed Yunus and Khalequ Zaman and Mami Taniuchi}, title = {Multiscale model for forecasting Sabin 2 vaccine virus household and community transmission}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009690}, doi = {10.1371/JOURNAL.PCBI.1009690}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/FamulareWHPSAAI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FehrmanRM21, author = {Christof Fehrman and Tyler D. Robbins and C. Daniel Meliza}, title = {Nonlinear effects of intrinsic dynamics on temporal encoding in a model of avian auditory cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008768}, doi = {10.1371/JOURNAL.PCBI.1008768}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/FehrmanRM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FerrarioPKLSRB21, author = {Andrea Ferrario and Andrey Palyanov and Stella Koutsikou and Wen{-}Chang Li and Stephen R. Soffe and Alan Roberts and Roman Borisyuk}, title = {From decision to action: Detailed modelling of frog tadpoles reveals neuronal mechanisms of decision-making and reproduces unpredictable swimming movements in response to sensory signals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009654}, doi = {10.1371/JOURNAL.PCBI.1009654}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FerrarioPKLSRB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FerreiraSP21, author = {Pedro L. Ferreira and Francisco C. Santos and S{\'{e}}rgio Pequito}, title = {Risk sensitivity and theory of mind in human coordination}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009167}, doi = {10.1371/JOURNAL.PCBI.1009167}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FerreiraSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FerrucciGM21, author = {Lorenzo Ferrucci and Aldo Genovesio and Encarni Marcos}, title = {The importance of urgency in decision making based on dynamic information}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009455}, doi = {10.1371/JOURNAL.PCBI.1009455}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FerrucciGM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FeulnerC21, author = {Barbara Feulner and Claudia Clopath}, title = {Neural manifold under plasticity in a goal driven learning behaviour}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008621}, doi = {10.1371/JOURNAL.PCBI.1008621}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FeulnerC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FilippoDP21, author = {Marzia Di Filippo and Chiara Damiani and Dario Pescini}, title = {GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009550}, doi = {10.1371/JOURNAL.PCBI.1009550}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/FilippoDP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FinkeKBDTSRSKBM21, author = {Kelly Finke and Michael Kourakos and Gabriela Brown and Huyen Trang Dang and Shi Jie Samuel Tan and Yuval B. Simons and Shweta Ramdas and Alejandro A. Sch{\"{a}}ffer and Rachel L. Kember and Maja Bucan and Sara Mathieson}, title = {Ancestral haplotype reconstruction in endogamous populations using identity-by-descent}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008638}, doi = {10.1371/JOURNAL.PCBI.1008638}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FinkeKBDTSRSKBM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FisconCFP21, author = {Giulia Fiscon and Federica Conte and Lorenzo Farina and Paola Paci}, title = {SAveRUNNER: {A} network-based algorithm for drug repurposing and its application to {COVID-19}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008686}, doi = {10.1371/JOURNAL.PCBI.1008686}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/FisconCFP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FoleySFR21, author = {Michael Foley and Rory Smead and Patrick Forber and Christoph Riedl}, title = {Avoiding the bullies: The resilience of cooperation among unequals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008847}, doi = {10.1371/JOURNAL.PCBI.1008847}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FoleySFR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Frasier21, author = {Kaitlin E. Frasier}, title = {A machine learning pipeline for classification of cetacean echolocation clicks in large underwater acoustic datasets}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009613}, doi = {10.1371/JOURNAL.PCBI.1009613}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Frasier21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FriedrichGP21, author = {Johannes Friedrich and Andrea Giovannucci and Eftychios A. Pnevmatikakis}, title = {Online analysis of microendoscopic 1-photon calcium imaging data streams}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008565}, doi = {10.1371/JOURNAL.PCBI.1008565}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FriedrichGP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Frost21, author = {H. Robert Frost}, title = {Analyzing cancer gene expression data through the lens of normal tissue-specificity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009085}, doi = {10.1371/JOURNAL.PCBI.1009085}, timestamp = {Sat, 28 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Frost21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FujiiMFO21, author = {Takeru Fujii and Kazumitsu Maehara and Masatoshi Fujita and Yasuyuki Ohkawa}, title = {Discriminative feature of cells characterizes cell populations of interest by a small subset of genes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009579}, doi = {10.1371/JOURNAL.PCBI.1009579}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FujiiMFO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Galaz-DavisonRR21, author = {Pablo Galaz{-}Davison and Ernesto A. Rom{\'{a}}n and C{\'{e}}sar A. Ram{\'{\i}}rez{-}Sarmiento}, title = {The N-terminal domain of RfaH plays an active role in protein fold-switching}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008882}, doi = {10.1371/JOURNAL.PCBI.1008882}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Galaz-DavisonRR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Gallardo-AlbaGS21, author = {Crist{\'{o}}bal Gallardo{-}Alba and Bj{\"{o}}rn A. Gr{\"{u}}ning and Beatriz Serrano{-}Solano}, title = {A constructivist-based proposal for bioinformatics teaching practices during lockdown}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008922}, doi = {10.1371/JOURNAL.PCBI.1008922}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Gallardo-AlbaGS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GallinaroC21, author = {J{\'{u}}lia V. Gallinaro and Claudia Clopath}, title = {Memories in a network with excitatory and inhibitory plasticity are encoded in the spiking irregularity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009593}, doi = {10.1371/JOURNAL.PCBI.1009593}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GallinaroC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GalloisC21, author = {Benjamin Gallois and Rapha{\"{e}}l Candelier}, title = {FastTrack: An open-source software for tracking varying numbers of deformable objects}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008697}, doi = {10.1371/JOURNAL.PCBI.1008697}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GalloisC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GameiroGKM21, author = {Marcio Gameiro and Tom{\'{a}}s Gedeon and Shane Kepley and Konstantin Mischaikow}, title = {Rational design of complex phenotype via network models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009189}, doi = {10.1371/JOURNAL.PCBI.1009189}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GameiroGKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GarciaGDTDGC21, author = {Pedro Manuel Mart{\'{\i}}nez Garc{\'{\i}}a and Miguel Garc{\'{\i}}a{-}Torres and Federico Divina and Jos{\'{e}} Terr{\'{o}}n{-}Bautista and Irene Delgado{-}Sainz and Francisco G{\'{o}}mez{-}Vela and Felipe Cort{\'{e}}s{-}Ledesma}, title = {Genome-wide prediction of topoisomerase II{\(\beta\)} binding by architectural factors and chromatin accessibility}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007814}, doi = {10.1371/JOURNAL.PCBI.1007814}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GarciaGDTDGC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GardnerK21, author = {Billy J. Gardner and A. Marm Kilpatrick}, title = {Contact tracing efficiency, transmission heterogeneity, and accelerating {COVID-19} epidemics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009122}, doi = {10.1371/JOURNAL.PCBI.1009122}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GardnerK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Garrido-Rodriguez21, author = {Mart{\'{\i}}n Garrido{-}Rodriguez and Daniel L{\'{o}}pez{-}L{\'{o}}pez and Francisco M. Ortu{\~{n}}o and Mar{\'{\i}}a Pe{\~{n}}a{-}Chilet and Eduardo Mu{\~{n}}oz and Marco A. Calzado and Joaqu{\'{\i}}n Dopazo}, title = {A versatile workflow to integrate RNA-seq genomic and transcriptomic data into mechanistic models of signaling pathways}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008748}, doi = {10.1371/JOURNAL.PCBI.1008748}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Garrido-Rodriguez21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GarwoodCDMKCAMB21, author = {Indie C. Garwood and Sourish Chakravarty and Jacob A. Donoghue and Meredith Mahnke and Pegah Kahali and Shubham Chamadia and Oluwaseun Akeju and Earl K. Miller and Emery N. Brown}, title = {A hidden Markov model reliably characterizes ketamine-induced spectral dynamics in macaque local field potentials and human electroencephalograms}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009280}, doi = {10.1371/JOURNAL.PCBI.1009280}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GarwoodCDMKCAMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GastaldiSFQG21, author = {Chiara Gastaldi and Tilo Schwalger and Emanuela De Falco and Rodrigo Quian Quiroga and Wulfram Gerstner}, title = {When shared concept cells support associations: Theory of overlapping memory engrams}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009691}, doi = {10.1371/JOURNAL.PCBI.1009691}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GastaldiSFQG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GaurQBBCNV21, author = {Namit Gaur and Xiao{-}Yan Qi and David Benoist and Olivier Bernus and Ruben Coronel and Stanley Nattel and Edward J. Vigmond}, title = {A computational model of pig ventricular cardiomyocyte electrophysiology and calcium handling: Translation from pig to human electrophysiology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009137}, doi = {10.1371/JOURNAL.PCBI.1009137}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GaurQBBCNV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GautreauBGPBDPM21, author = {Guillaume Gautreau and Adelme Bazin and Mathieu Gachet and R{\'{e}}mi Planel and Laura Burlot and Mathieu Dubois and Amandine Perrin and Claudine M{\'{e}}digue and Alexandra Calteau and St{\'{e}}phane Cruveiller and Catherine Matias and Christophe Ambroise and Eduardo P. C. Rocha and David Vallenet}, title = {Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009687}, doi = {10.1371/JOURNAL.PCBI.1009687}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GautreauBGPBDPM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GeorgiouBGLT21, author = {Fillipe Georgiou and J{\'{e}}r{\^{o}}me Buhl and J. E. F. Green and Bishnu P. Lamichhane and Ngamta Thamwattana}, title = {Modelling locust foraging: How and why food affects group formation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008353}, doi = {10.1371/JOURNAL.PCBI.1008353}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GeorgiouBGLT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GeorgiouBGLT21a, author = {Fillipe Georgiou and J{\'{e}}r{\^{o}}me Buhl and J. E. F. Green and Bishnu P. Lamichhane and Ngamta Thamwattana}, title = {Correction: Modelling locust foraging: How and why food affects group formation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009695}, doi = {10.1371/JOURNAL.PCBI.1009695}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GeorgiouBGLT21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GerardMCEL21, author = {Claude G{\'{e}}rard and Laurane De Mot and Sabine Cordi and Jonathan van Eyll and Fr{\'{e}}d{\'{e}}ric Lemaigre}, title = {Temporal dynamics of a {CSF1R} signaling gene regulatory network involved in epilepsy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008854}, doi = {10.1371/JOURNAL.PCBI.1008854}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GerardMCEL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GershmanGC21, author = {Samuel J. Gershman and Marc Guitart{-}Masip and James F. Cavanagh}, title = {Neural signatures of arbitration between Pavlovian and instrumental action selection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008553}, doi = {10.1371/JOURNAL.PCBI.1008553}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GershmanGC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GhazizadehC21, author = {Elham Ghazizadeh and ShiNung Ching}, title = {Slow manifolds within network dynamics encode working memory efficiently and robustly}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009366}, doi = {10.1371/JOURNAL.PCBI.1009366}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GhazizadehC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GhomlaghiYSJN21, author = {Milad Ghomlaghi and Guang Yang and Sung{-}Young Shin and David E. James and Lan K. Nguyen}, title = {Dynamic modelling of the {PI3K/MTOR} signalling network uncovers biphasic dependence of mTORC1 activity on the mTORC2 subunit {SIN1}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008513}, doi = {10.1371/JOURNAL.PCBI.1008513}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GhomlaghiYSJN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GiammonaC21, author = {James Giammona and Otger Camp{\`{a}}s}, title = {Physical constraints on early blastomere packings}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007994}, doi = {10.1371/JOURNAL.PCBI.1007994}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GiammonaC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GiannariHM21, author = {Dafni Giannari and Cleo Hanchen Ho and Radhakrishnan Mahadevan}, title = {A gap-filling algorithm for prediction of metabolic interactions in microbial communities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009060}, doi = {10.1371/JOURNAL.PCBI.1009060}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GiannariHM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GibbsNLCDSPGgKE21, author = {Hamish Gibbs and Emily Nightingale and Yang Liu and James A. Cheshire and Leon Danon and Liam Smeeth and Carl A. B. Pearson and Chris Grundy and LSHTM CMMID COVID and Adam J. Kucharski and Rosalind M. Eggo}, title = {Detecting behavioural changes in human movement to inform the spatial scale of interventions against {COVID-19}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009162}, doi = {10.1371/JOURNAL.PCBI.1009162}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GibbsNLCDSPGgKE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GibsonMRO21, author = {Graham Casey Gibson and Kelly R. Moran and Nicholas G. Reich and Dave Osthus}, title = {Improving probabilistic infectious disease forecasting through coherence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007623}, doi = {10.1371/JOURNAL.PCBI.1007623}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GibsonMRO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GijsenGLOB21, author = {Sam Gijsen and Miro Grundei and Robert T. Lange and Dirk Ostwald and Felix Blankenburg}, title = {Neural surprise in somatosensory Bayesian learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008068}, doi = {10.1371/JOURNAL.PCBI.1008068}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GijsenGLOB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GiladLS21, author = {Gal Gilad and Mark D. M. Leiserson and Roded Sharan}, title = {A data-driven approach for constructing mutation categories for mutational signature analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009542}, doi = {10.1371/JOURNAL.PCBI.1009542}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GiladLS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GilesCGTEMW21, author = {John R. Giles and Derek A. T. Cummings and Bryan T. Grenfell and Andrew J. Tatem and Elisabeth Zu Erbach{-}Schoenberg and C. Jessica E. Metcalf and Amy Wesolowski}, title = {Trip duration drives shift in travel network structure with implications for the predictability of spatial disease spread}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009127}, doi = {10.1371/JOURNAL.PCBI.1009127}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GilesCGTEMW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GokhaleGR21, author = {Chaitanya S. Gokhale and Stefano Giaimo and Philippe Remigi}, title = {Memory shapes microbial populations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009431}, doi = {10.1371/JOURNAL.PCBI.1009431}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GokhaleGR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GoldbergF21, author = {Yaron Goldberg and Jonathan Friedman}, title = {Positive interactions within and between populations decrease the likelihood of evolutionary rescue}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008732}, doi = {10.1371/JOURNAL.PCBI.1008732}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GoldbergF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GoldenDBDHM21, author = {Nigel Golden and Kadambari Devarajan and Cathleen Balantic and Joseph Drake and Michael T. Hallworth and Toni Lyn Morelli}, title = {Ten simple rules for productive lab meetings}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008953}, doi = {10.1371/JOURNAL.PCBI.1008953}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GoldenDBDHM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GolosioLCPSTBP21, author = {Bruno Golosio and Chiara De Luca and Cristiano Capone and Elena Pastorelli and Giovanni Stegel and Gianmarco Tiddia and Giulia De Bonis and Pier Stanislao Paolucci}, title = {Thalamo-cortical spiking model of incremental learning combining perception, context and NREM-sleep}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009045}, doi = {10.1371/JOURNAL.PCBI.1009045}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GolosioLCPSTBP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GoncalvesA21, author = {In{\^{e}}s G. Gon{\c{c}}alves and Jos{\'{e}} Manuel Garc{\'{\i}}a Aznar}, title = {Extracellular matrix density regulates the formation of tumour spheroids through cell migration}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008764}, doi = {10.1371/JOURNAL.PCBI.1008764}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GoncalvesA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GoncalvesMDABCN21, author = {Ant{\'{o}}nio Gon{\c{c}}alves and Pauline Maisonnasse and Flora Donati and M{\'{e}}lanie Albert and Sylvie Behillil and Vanessa Contreras and Thibaut Naninck and Romain Marlin and Caroline Solas and Andres Pizzorno and Julien Lemaitre and Nidhal Kahlaoui and Olivier Terrier and Raphael Ho Tsong Fang and Vincent Enouf and Nathalie Dereuddre{-}Bosquet and Angela Brisebarre and Franck Touret and Catherine Chapon and Bruno Hoen and Bruno Lina and Manuel Rosa Calatrava and Xavier de Lamballerie and France Mentr{\'{e}} and Roger Le Grand and Sylvie van der Werf and J{\'{e}}r{\'{e}}mie Guedj}, title = {SARS-CoV-2 viral dynamics in non-human primates}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008785}, doi = {10.1371/JOURNAL.PCBI.1008785}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GoncalvesMDABCN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GoncalvesPCKPLJ21, author = {Bronner P. Gon{\c{c}}alves and Simon R. Procter and Sam Clifford and Artemis Koukounari and Proma Paul and Alexandra M. Lewin and Mark Jit and Joy Lawn}, title = {Estimation of country-level incidence of early-onset invasive Group {B} Streptococcus disease in infants using Bayesian methods}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009001}, doi = {10.1371/JOURNAL.PCBI.1009001}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GoncalvesPCKPLJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Gonzalez-Ramirez21, author = {Mar Gonz{\'{a}}lez{-}Ram{\'{\i}}rez and Cecilia Ballar{\'{e}} and Francesca Mugianesi and Malte Beringer and Alexandra Santanach and Enrique Blanco and Luciano Di Croce}, title = {Differential contribution to gene expression prediction of histone modifications at enhancers or promoters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009368}, doi = {10.1371/JOURNAL.PCBI.1009368}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Gonzalez-Ramirez21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GordinPZGMCAVCY21, author = {Miri Gordin and Hagit Philip and Alona Zilberberg and Moriah Gidoni and Raanan Margalit and Christopher Clouser and Kristofor Adams and Francois Vigneault and Irun R. Cohen and Gur Yaari and Sol Efroni}, title = {Breast cancer is marked by specific, Public T-cell receptor {CDR3} regions shared by mice and humans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008486}, doi = {10.1371/JOURNAL.PCBI.1008486}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GordinPZGMCAVCY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GormanTMDPF21, author = {Julia C. Gorman and Oliver L. Tufte and Anna V. R. Miller and William M. DeBello and Jos{\'{e}} Luis Pe{\~{n}}a and Brian J. Fischer}, title = {Diverse processing underlying frequency integration in midbrain neurons of barn owls}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009569}, doi = {10.1371/JOURNAL.PCBI.1009569}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GormanTMDPF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GosceJKBHJSKHZF21, author = {Lara Gosc{\'{e}} and Gerard J. Abou Jaoude and David Jacob Kedziora and Clemens Benedikt and Azfar Hussain and Sarah Jarvis and Alena Skrahina and Dzmitry Klimuk and Henadz Hurevich and Feng Zhao and Nicole Fraser{-}Hurt and Nejma Cheikh and Marelize Gorgens and David J. Wilson and Romesh G. Abeysuriya and Rowan Martin{-}Hughes and Sherrie L. Kelly and Anna Roberts and Robyn M. Stuart and Tom Palmer and Jasmina Panovska{-}Griffiths and Cliff C. Kerr and David P. Wilson and Hassan Haghparast{-}Bidgoli and Jolene Skordis and Ibrahim Abubakar}, title = {Optima {TB:} {A} tool to help optimally allocate tuberculosis spending}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009255}, doi = {10.1371/JOURNAL.PCBI.1009255}, timestamp = {Wed, 20 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GosceJKBHJSKHZF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GosticMBAJTKNHS21, author = {Katelyn M. Gostic and Lauren McGough and Edward B. Baskerville and Sam Abbott and Keya Joshi and Christine Tedijanto and Rebecca Kahn and Rene Niehus and James A. Hay and Pablo M. De Salazar and Joel Hellewell and Sophie Meakin and James D. Munday and Nikos I. Bosse and Katharine Sherratt and Robin N. Thompson and Laura F. White and Jana S. Huisman and J{\'{e}}r{\'{e}}mie Scire and Sebastian Bonhoeffer and Tanja Stadler and Jacco Wallinga and Sebastian Funk and Marc Lipsitch and Sarah Cobey}, title = {Correction: Practical considerations for measuring the effective reproductive number, Rt}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009679}, doi = {10.1371/JOURNAL.PCBI.1009679}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GosticMBAJTKNHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GosztylaKMWBCCD21, author = {Maya L. Gosztyla and Lydia Kwong and Naomi A. Murray and Claire E. Williams and Nicholas Behnke and Porsia Curry and Kevin D. Corbett and Karen N. DSouza and Julia Gala de Pablo and Joanina Gicobi and Monica Javidnia and Navina Lotay and Sidney Madison Prescott and James P. Quinn and Zeena M. G. Rivera and Markia A. Smith and Karen T. Y. Tang and Aarya Venkat and Megan A. Yamoah}, title = {Responses to 10 common criticisms of anti-racism action in {STEMM}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009141}, doi = {10.1371/JOURNAL.PCBI.1009141}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GosztylaKMWBCCD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GoulardBNGW21, author = {Roman Goulard and Cornelia Buehlmann and Jeremy E. Niven and Paul Graham and Barbara Webb}, title = {A unified mechanism for innate and learned visual landmark guidance in the insect central complex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009383}, doi = {10.1371/JOURNAL.PCBI.1009383}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GoulardBNGW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GozziBP21, author = {Nicol{\`{o}} Gozzi and Paolo Bajardi and Nicola Perra}, title = {The importance of non-pharmaceutical interventions during the {COVID-19} vaccine rollout}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009346}, doi = {10.1371/JOURNAL.PCBI.1009346}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GozziBP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GreenMDCTTR21, author = {Adrian J. Green and Martin J. Mohlenkamp and Jhuma Das and Meenal Chaudhari and Lisa Truong and Robyn L. Tanguay and David M. Reif}, title = {Leveraging high-throughput screening data, deep neural networks, and conditional generative adversarial networks to advance predictive toxicology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009135}, doi = {10.1371/JOURNAL.PCBI.1009135}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GreenMDCTTR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GrijseelsSBH21, author = {Dori M. Grijseels and Kira Shaw and Caswell Barry and Catherine N. Hall}, title = {Choice of method of place cell classification determines the population of cells identified}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008835}, doi = {10.1371/JOURNAL.PCBI.1008835}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GrijseelsSBH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GronowitzLQYC21, author = {Mitchell E. Gronowitz and Adam Liu and Qiang Qiu and C. Ron Yu and Thomas A. Cleland}, title = {A physicochemical model of odor sampling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009054}, doi = {10.1371/JOURNAL.PCBI.1009054}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GronowitzLQYC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuKBCKJGG21, author = {Qiang Gu and Anup Kumar and Simon Bray and Allison Creason and Alireza Khanteymoori and Vahid Jalili and Bj{\"{o}}rn A. Gr{\"{u}}ning and Jeremy Goecks}, title = {Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009014}, doi = {10.1371/JOURNAL.PCBI.1009014}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuKBCKJGG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuersteinRDMDPP21, author = {Sharon Guerstein and Victoria Romeo{-}Aznar and Ma'ayan Dekel and Oren Miron and Nadav Davidovitch and Rami Puzis and Shai Pilosof}, title = {The interplay between vaccination and social distancing strategies affects {COVID19} population-level outcomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009319}, doi = {10.1371/JOURNAL.PCBI.1009319}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuersteinRDMDPP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GugoleCESVC21, author = {Federica Gugole and Luc E. Coffeng and Wouter Edeling and Benjamin Sanderse and Sake J. De Vlas and Daan Crommelin}, title = {Uncertainty quantification and sensitivity analysis of {COVID-19} exit strategies in an individual-based transmission model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009355}, doi = {10.1371/JOURNAL.PCBI.1009355}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GugoleCESVC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuignonBMSFLF21, author = {Valentin Guignon and Catherine Breton and J{\'{e}}r{\^{o}}me Mariette and Fran{\c{c}}ois Sabot and Julien Fumey and Vincent Lefort and Anna{-}Sophie Fiston{-}Lavier}, title = {Ten simple rules for switching from face-to-face to remote conference: An opportunity to estimate the reduction in {GHG} emissions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009321}, doi = {10.1371/JOURNAL.PCBI.1009321}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuignonBMSFLF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GulsevinM21, author = {Alican Gulsevin and Jens Meiler}, title = {Prediction of amphipathic helix - membrane interactions with Rosetta}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008818}, doi = {10.1371/JOURNAL.PCBI.1008818}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GulsevinM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuoNB21, author = {Yipei Guo and Mor Nitzan and Michael P. Brenner}, title = {Programming cell growth into different cluster shapes using diffusible signals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009576}, doi = {10.1371/JOURNAL.PCBI.1009576}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuoNB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuoYSHOKPNSY21, author = {Yan Guo and Hui Yu and Haocan Song and Jiapeng He and Olufunmilola Oyebamiji and Huining Kang and Jie Ping and Scott Ness and Yu Shyr and Fei Ye}, title = {MetaGSCA: {A} tool for meta-analysis of gene set differential coexpression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008976}, doi = {10.1371/JOURNAL.PCBI.1008976}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuoYSHOKPNSY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuoYSLZZ21, author = {Weifeng Guo and Xiangtian Yu and Qianqian Shi and Jing Liang and Shao{-}Wu Zhang and Tao Zeng}, title = {Performance assessment of sample-specific network control methods for bulk and single-cell biological data analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008962}, doi = {10.1371/JOURNAL.PCBI.1008962}, timestamp = {Tue, 20 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GuoYSLZZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuptaSK21, author = {Ankit Gupta and Christoph Schwab and Mustafa Khammash}, title = {DeepCME: {A} deep learning framework for computing solution statistics of the chemical master equation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009623}, doi = {10.1371/JOURNAL.PCBI.1009623}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuptaSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GutierrezAKBMMM21, author = {Noelia Grande Guti{\'{e}}rrez and Mark S. Alber and Andrew M. Kahn and Jane C. Burns and Mathew Mathew and Brian W. McCrindle and Alison L. Marsden}, title = {Computational modeling of blood component transport related to coronary artery thrombosis in Kawasaki disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009331}, doi = {10.1371/JOURNAL.PCBI.1009331}, timestamp = {Tue, 23 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GutierrezAKBMMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GuyeuxSNR21, author = {Christophe Guyeux and Christophe Sola and Camille No{\^{u}}s and Guislaine Refregier}, title = {CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the {CRISPR} locus in mycobacterium tuberculosis complex using {SRA}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008500}, doi = {10.1371/JOURNAL.PCBI.1008500}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/GuyeuxSNR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HackmannZ21, author = {Timothy J. Hackmann and Bo Zhang}, title = {Using neural networks to mine text and predict metabolic traits for thousands of microbes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008757}, doi = {10.1371/JOURNAL.PCBI.1008757}, timestamp = {Wed, 24 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HackmannZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HaelewatersHR21, author = {Danny Haelewaters and Tina A. Hofmann and Adriana L. Romero{-}Olivares}, title = {Ten simple rules for Global North researchers to stop perpetuating helicopter research in the Global South}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009277}, doi = {10.1371/JOURNAL.PCBI.1009277}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HaelewatersHR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HagaF21, author = {Tatsuya Haga and Tomoki Fukai}, title = {Multiscale representations of community structures in attractor neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009296}, doi = {10.1371/JOURNAL.PCBI.1009296}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HagaF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HagemannWSMP21, author = {Annika Hagemann and Jens Wilting and Bita Samimizad and Florian Mormann and Viola Priesemann}, title = {Assessing criticality in pre-seizure single-neuron activity of human epileptic cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008773}, doi = {10.1371/JOURNAL.PCBI.1008773}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HagemannWSMP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HaggertyP21, author = {Raymond A. Haggerty and Jeremy E. Purvis}, title = {Inferring the structures of signaling motifs from paired dynamic traces of single cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008657}, doi = {10.1371/JOURNAL.PCBI.1008657}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HaggertyP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HagolaniZVS21, author = {Pascal F. Hagolani and Roland Zimm and Renske Vroomans and Isaac Salazar{-}Ciudad}, title = {On the evolution and development of morphological complexity: {A} view from gene regulatory networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008570}, doi = {10.1371/JOURNAL.PCBI.1008570}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HagolaniZVS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HagolaniZVS21a, author = {Pascal F. Hagolani and Roland Zimm and Renske M. A. Vroomans and Isaac Salazar{-}Ciudad}, title = {Correction: On the evolution and development of morphological complexity: {A} view from gene regulatory networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009686}, doi = {10.1371/JOURNAL.PCBI.1009686}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HagolaniZVS21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HaimanZKYP21, author = {Zachary B. Haiman and Daniel C. Zielinski and Yuko Koike and James T. Yurkovich and Bernhard O. Palsson}, title = {MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008208}, doi = {10.1371/JOURNAL.PCBI.1008208}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HaimanZKYP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HallGLC21, author = {Christina R. Hall and Philippa C. Griffin and Andrew Lonie and Jeffrey H. Christiansen}, title = {Application of a bioinformatics training delivery method for reaching dispersed and distant trainees}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008715}, doi = {10.1371/JOURNAL.PCBI.1008715}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HallGLC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HammadRBBDLMS21, author = {Gr{\'{e}}gory Hammad and Mathilde Reyt and Nikita Beliy and Marion Baillet and Michele Deantoni and Alexia Lesoinne and Vincenzo Muto and Christina Schmidt}, title = {pyActigraphy: Open-source python package for actigraphy data visualization and analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009514}, doi = {10.1371/JOURNAL.PCBI.1009514}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HammadRBBDLMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HammelmanG21, author = {Jennifer Hammelman and David K. Gifford}, title = {Discovering differential genome sequence activity with interpretable and efficient deep learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009282}, doi = {10.1371/JOURNAL.PCBI.1009282}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HammelmanG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HanSA21, author = {Lichy Han and Zahra N. Sayyid and Russ B. Altman}, title = {Modeling drug response using network-based personalized treatment prediction (NetPTP) with applications to inflammatory bowel disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008631}, doi = {10.1371/JOURNAL.PCBI.1008631}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HanSA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HansenGF21, author = {Bruce C. Hansen and Michelle R. Greene and David J. Field}, title = {Dynamic Electrode-to-Image {(DETI)} mapping reveals the human brain's spatiotemporal code of visual information}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009456}, doi = {10.1371/JOURNAL.PCBI.1009456}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HansenGF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HanspersKCDDEHL21, author = {Kristina Hanspers and Martina Kutmon and Susan L. Coort and Daniela Digles and Lauren J. Dupuis and Friederike Ehrhart and Finterly Hu and Elisson N. Lopes and Marvin Martens and Nhung Pham and Woosub Shin and Denise N. Slenter and Andra Waagmeester and Egon L. Willighagen and Laurent A. Winckers and Chris T. A. Evelo and Alexander R. Pico}, title = {Ten simple rules for creating reusable pathway models for computational analysis and visualization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009226}, doi = {10.1371/JOURNAL.PCBI.1009226}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HanspersKCDDEHL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HanussekBK21, author = {Maximilian Hanussek and Felix Bartusch and Jens Kr{\"{u}}ger}, title = {Performance and scaling behavior of bioinformatic applications in virtualization environments to create awareness for the efficient use of compute resources}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009244}, doi = {10.1371/JOURNAL.PCBI.1009244}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HanussekBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HarrisG21, author = {A. J. Harris and Aaron David Goldman}, title = {The very early evolution of protein translocation across membranes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008623}, doi = {10.1371/JOURNAL.PCBI.1008623}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HarrisG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HarrisonBCP21, author = {Peter M. C. Harrison and Roberta Bianco and Maria Chait and Marcus T. Pearce}, title = {Correction: PPM-Decay: {A} computational model of auditory prediction with memory decay}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008995}, doi = {10.1371/JOURNAL.PCBI.1008995}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HarrisonBCP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HartmannZ21, author = {Julian Hartmann and Martin Zacharias}, title = {Mechanism of collagen folding propagation studied by Molecular Dynamics simulations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009079}, doi = {10.1371/JOURNAL.PCBI.1009079}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HartmannZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HartungBMLKAL21, author = {Grant Hartung and Shoale Badr and Mohammad Moeini and Fr{\'{e}}d{\'{e}}ric Lesage and David Kleinfeld and Ali Alaraj and Andreas A. Linninger}, title = {Voxelized simulation of cerebral oxygen perfusion elucidates hypoxia in aged mouse cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008584}, doi = {10.1371/JOURNAL.PCBI.1008584}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HartungBMLKAL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HashemiVSDPWGBW21, author = {Meysam Hashemi and Anirudh Nihalani Vattikonda and Viktor Sip and Sandra Diaz{-}Pier and Alexander Peyser and Huifang E. Wang and Maxime Guye and Fabrice Bartolomei and Michael Marmaduke Woodman and Viktor K. Jirsa}, title = {On the influence of prior information evaluated by fully Bayesian criteria in a personalized whole-brain model of epilepsy spread}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009129}, doi = {10.1371/JOURNAL.PCBI.1009129}, timestamp = {Fri, 12 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HashemiVSDPWGBW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HaspingerKH21, author = {Daniel Ch. Haspinger and Sandra Klinge and Gerhard A. Holzapfel}, title = {Numerical analysis of the impact of cytoskeletal actin filament density alterations onto the diffusive vesicle-mediated cell transport}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008784}, doi = {10.1371/JOURNAL.PCBI.1008784}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HaspingerKH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HattabRH21, author = {Georges Hattab and Theresa{-}Marie Rhyne and Dominik Heider}, title = {Correction: Ten simple rules to colorize biological data visualization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008901}, doi = {10.1371/JOURNAL.PCBI.1008901}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HattabRH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HauptZABDKH21, author = {Saskia Haupt and Alexander Zeilmann and Aysel Ahadova and Hendrik Bl{\"{a}}ker and Magnus von Knebel Doeberitz and Matthias Kloor and Vincent Heuveline}, title = {Mathematical modeling of multiple pathways in colorectal carcinogenesis using dynamical systems with Kronecker structure}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008970}, doi = {10.1371/JOURNAL.PCBI.1008970}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HauptZABDKH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HavumakiCZMGEZ21, author = {Joshua Havumaki and Ted Cohen and Chengwei Zhai and Joel C. Miller and Seth D. Guikema and Marisa C. Eisenberg and Jon Zelner}, title = {Protective impacts of household-based tuberculosis contact tracing are robust across endemic incidence levels and community contact patterns}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008713}, doi = {10.1371/JOURNAL.PCBI.1008713}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HavumakiCZMGEZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Hawkins-HookerD21, author = {Alex Hawkins{-}Hooker and Florence Depardieu and Sebastien Baur and Guillaume Couairon and Arthur Chen and David Bikard}, title = {Generating functional protein variants with variational autoencoders}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008736}, doi = {10.1371/JOURNAL.PCBI.1008736}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Hawkins-HookerD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HeP21, author = {Qixin He and Mercedes Pascual}, title = {An antigenic diversification threshold for falciparum malaria transmission at high endemicity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008729}, doi = {10.1371/JOURNAL.PCBI.1008729}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HeP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HeSYYWWYFB21, author = {Song He and Xinyu Song and Xiaoxi Yang and Jijun Yu and Yuqi Wen and Lianlian Wu and Bowei Yan and Jiannan Feng and Xiaochen Bo}, title = {{COMSUC:} {A} web server for the identification of consensus molecular subtypes of cancer based on multiple methods and multi-omics data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008769}, doi = {10.1371/JOURNAL.PCBI.1008769}, timestamp = {Sun, 04 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HeSYYWWYFB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HebertACOS21, author = {Laetitia Hebert and Tosif Ahamed and Antonio C. Costa and Liam O'Shaughnessy and Greg J. Stephens}, title = {WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008914}, doi = {10.1371/JOURNAL.PCBI.1008914}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HebertACOS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HeitmannSVH21, author = {Stewart Heitmann and Anton Shpak and Jamie I. Vandenberg and Adam P. Hill}, title = {Arrhythmogenic effects of ultra-long and bistable cardiac action potentials}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008683}, doi = {10.1371/JOURNAL.PCBI.1008683}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HeitmannSVH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HellsternMYS21, author = {Michael Hellstern and Jing Ma and Kun Yue and Ali Shojaie}, title = {netgsa: Fast computation and interactive visualization for topology-based pathway enrichment analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008979}, doi = {10.1371/JOURNAL.PCBI.1008979}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HellsternMYS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HendryKM21, author = {Jason A. Hendry and Dominic Kwiatkowski and Gil McVean}, title = {Elucidating relationships between P.falciparum prevalence and measures of genetic diversity with a combined genetic-epidemiological model of malaria}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009287}, doi = {10.1371/JOURNAL.PCBI.1009287}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HendryKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HenriquesIHD21, author = {Gil Jorge Barros Henriques and Koichi Ito and Christoph Hauert and Michael Doebeli}, title = {On the importance of evolving phenotype distributions on evolutionary diversification}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008733}, doi = {10.1371/JOURNAL.PCBI.1008733}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HenriquesIHD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HenriquesVD21, author = {Gil Jorge Barros Henriques and Simon van Vliet and Michael Doebeli}, title = {Multilevel selection favors fragmentation modes that maintain cooperative interactions in multispecies communities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008896}, doi = {10.1371/JOURNAL.PCBI.1008896}, timestamp = {Mon, 02 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HenriquesVD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Henson21, author = {Michael A. Henson}, title = {Computational modeling of the gut microbiota reveals putative metabolic mechanisms of recurrent Clostridioides difficile infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008782}, doi = {10.1371/JOURNAL.PCBI.1008782}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Henson21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HeoSL21, author = {Suyeon Heo and Yoondo Sung and Sang Wan Lee}, title = {Effects of subclinical depression on prefrontal-striatal model-based and model-free learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009003}, doi = {10.1371/JOURNAL.PCBI.1009003}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HeoSL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HerediaRP21, author = {Frances L. Heredia and Abiel Roche{-}Lima and Elsie I. Par{\'{e}}s{-}Matos}, title = {A novel artificial intelligence-based approach for identification of deoxynucleotide aptamers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009247}, doi = {10.1371/JOURNAL.PCBI.1009247}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HerediaRP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HetmanskiJCSC21, author = {Joseph H. R. Hetmanski and Matthew C. Jones and Fatima Chunara and Jean{-}Marc Schwartz and Patrick T. Caswell}, title = {Combinatorial mathematical modelling approaches to interrogate rear retraction dynamics in 3D cell migration}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008213}, doi = {10.1371/JOURNAL.PCBI.1008213}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HetmanskiJCSC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HicksLNPR21, author = {Stephanie C. Hicks and Ruoxi Liu and Yuwei Ni and Elizabeth Purdom and Davide Risso}, title = {mbkmeans: Fast clustering for single cell data using mini-batch k-means}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008625}, doi = {10.1371/JOURNAL.PCBI.1008625}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HicksLNPR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HillAKDT21, author = {Edward M. Hill and Benjamin D. Atkins and Matt J. Keeling and Louise Dyson and Michael J. Tildesley}, title = {A network modelling approach to assess non-pharmaceutical disease controls in a worker population: An application to SARS-CoV-2}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009058}, doi = {10.1371/JOURNAL.PCBI.1009058}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HillAKDT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HillTD21, author = {Sam R. Hill and Reidun Twarock and Eric C. Dykeman}, title = {The impact of local assembly rules on {RNA} packaging in a {T} = 1 satellite plant virus}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009306}, doi = {10.1371/JOURNAL.PCBI.1009306}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HillTD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HimeokaM21, author = {Yusuke Himeoka and Namiko Mitarai}, title = {When to wake up? The optimal waking-up strategies for starvation-induced persistence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008655}, doi = {10.1371/JOURNAL.PCBI.1008655}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HimeokaM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HinchPNKWHLCZSF21, author = {Robert Hinch and William J. M. Probert and Anel Nurtay and Michelle Kendall and Chris Wymant and Matthew Hall and Katrina A. Lythgoe and Ana Bulas Cruz and Lele Zhao and Andrea Stewart and Luca Ferretti and Daniel Montero and James Warren and Nicole Mather and Matthew Abueg and Neo Wu and Olivier Legat and Katie Bentley and Thomas Mead and Kelvin Van{-}Vuuren and Dylan Feldner{-}Busztin and Tommaso Ristori and Anthony Finkelstein and David G. Bonsall and Lucie Abeler{-}D{\"{o}}rner and Christophe Fraser}, title = {OpenABM-Covid19 - An agent-based model for non-pharmaceutical interventions against {COVID-19} including contact tracing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009146}, doi = {10.1371/JOURNAL.PCBI.1009146}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HinchPNKWHLCZSF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HippenFWEZDVGH21, author = {Ariel A. Hippen and Matias M. Falco and Lukas M. Weber and Erdogan Pekcan Erkan and Kaiyang Zhang and Jennifer Anne Doherty and Anna V{\"{a}}h{\"{a}}rautio and Casey S. Greene and Stephanie C. Hicks}, title = {miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009290}, doi = {10.1371/JOURNAL.PCBI.1009290}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HippenFWEZDVGH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HolcombAHHLKHKD21, author = {David Holcomb and Aikaterini Alexaki and Nancy Hernandez and Ryan Hunt and Kyle Laurie and Jacob Kames and Nobuko Hamasaki{-}Katagiri and Anton A. Komar and Michael DiCuccio and Chava Kimchi{-}Sarfaty}, title = {Gene variants of coagulation related proteins that interact with SARS-CoV-2}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008805}, doi = {10.1371/JOURNAL.PCBI.1008805}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HolcombAHHLKHKD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HolcombGSSMTB21, author = {Michael C. Holcomb and Guo{-}Jie Jason Gao and Mahsa Servati and Dylan Schneider and Presley K. McNeely and Jeffrey H. Thomas and Jerzy Blawzdziewicz}, title = {Mechanical feedback and robustness of apical constrictions in Drosophila embryo ventral furrow formation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009173}, doi = {10.1371/JOURNAL.PCBI.1009173}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HolcombGSSMTB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HongBL21, author = {Fangfang Hong and Stephanie Badde and Michael S. Landy}, title = {Causal inference regulates audiovisual spatial recalibration via its influence on audiovisual perception}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008877}, doi = {10.1371/JOURNAL.PCBI.1008877}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HongBL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HongPHS21, author = {Jiayin Hong and Julius Palme and Bo Hua and Michael Springer}, title = {Computational analysis of {GAL} pathway pinpoints mechanisms underlying natural variation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008691}, doi = {10.1371/JOURNAL.PCBI.1008691}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HongPHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HooleyFD21, author = {Frances Hooley and Peter J. Freeman and Angela C. Davies}, title = {Ten simple rules for teaching applied programming in an authentic and immersive online environment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009184}, doi = {10.1371/JOURNAL.PCBI.1009184}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HooleyFD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HortaW21, author = {Edwin Rodriguez Horta and Martin Weigt}, title = {On the effect of phylogenetic correlations in coevolution-based contact prediction in proteins}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008957}, doi = {10.1371/JOURNAL.PCBI.1008957}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HortaW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HoskinsCOZCCSA21, author = {Jason W. Hoskins and Charles C. Chung and Aidan O'Brien and Jun Zhong and Katelyn Connelly and Irene Collins and Jianxin Shi and Laufey T. Amundadottir}, title = {Inferred expression regulator activities suggest genes mediating cardiometabolic genetic signals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009563}, doi = {10.1371/JOURNAL.PCBI.1009563}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HoskinsCOZCCSA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HowNC21, author = {Javier J. How and Saket Navlakha and Sreekanth H. Chalasani}, title = {Neural network features distinguish chemosensory stimuli in Caenorhabditis elegans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009591}, doi = {10.1371/JOURNAL.PCBI.1009591}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HowNC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HowertonFBBBJNP21, author = {Emily Howerton and Matthew J. Ferrari and Ottar N. Bj{\o}rnstad and Tiffany L. Bogich and Rebecca K. Borchering and Chris P. Jewell and James D. Nichols and William J. M. Probert and Michael C. Runge and Michael J. Tildesley and C{\'{e}}cile Viboud and Katriona Shea}, title = {Synergistic interventions to control {COVID-19:} Mass testing and isolation mitigates reliance on distancing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009518}, doi = {10.1371/JOURNAL.PCBI.1009518}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HowertonFBBBJNP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HsuCPLWLBOGM21, author = {Chun{-}Nan Hsu and Chia{-}Hui Chang and Thamolwan Poopradubsil and Amanda Lo and Karen A. William and Ko{-}Wei Lin and Anita E. Bandrowski and Ibrahim Burak {\"{O}}zyurt and Jeffrey S. Grethe and Maryann E. Martone}, title = {Antibody Watch: Text mining antibody specificity from the literature}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008967}, doi = {10.1371/JOURNAL.PCBI.1008967}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HsuCPLWLBOGM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuGGOSRMKOM21, author = {Brian Hu and Marina E. Garrett and Peter A. Groblewski and Douglas R. Ollerenshaw and Jiaqi Shang and Kate Roll and Sahar Manavi and Christof Koch and Shawn R. Olsen and Stefan Mihalas}, title = {Adaptation supports short-term memory in a visual change detection task}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009246}, doi = {10.1371/JOURNAL.PCBI.1009246}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HuGGOSRMKOM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuZ21, author = {Guodong Hu and Huan{-}Xiang Zhou}, title = {Binding free energy decomposition and multiple unbinding paths of buried ligands in a PreQ1 riboswitch}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009603}, doi = {10.1371/JOURNAL.PCBI.1009603}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HuZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuangC21, author = {Yi Huang and Ishanu Chattopadhyay}, title = {Universal risk phenotype of {US} counties for flu-like transmission to improve county-specific {COVID-19} incidence forecasts}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009363}, doi = {10.1371/JOURNAL.PCBI.1009363}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HuangC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuangTJKGPSBR21, author = {Qi Huang and Monika Tokmina{-}Lukaszewska and Lewis E. Johnson and Hayden Kallas and Bojana Ginovska and John W. Peters and Lance C. Seefeldt and Brian Bothner and Simone Raugei}, title = {Mechanical coupling in the nitrogenase complex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008719}, doi = {10.1371/JOURNAL.PCBI.1008719}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HuangTJKGPSBR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuangXZZ21, author = {Yiran Huang and Yusi Xie and Cheng Zhong and Fengfeng Zhou}, title = {Finding branched pathways in metabolic network via atom group tracking}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008676}, doi = {10.1371/JOURNAL.PCBI.1008676}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HuangXZZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuberRVSDRH21, author = {Florian Huber and Lars Ridder and Stefan Verhoeven and Jurriaan H. Spaaks and Faruk Diblen and Simon Rogers and Justin J. J. van der Hooft}, title = {Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008724}, doi = {10.1371/JOURNAL.PCBI.1008724}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/HuberRVSDRH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HuertasSC21, author = {Jan Huertas and Hans Robert Sch{\"{o}}ler and Vlad Cojocaru}, title = {Histone tails cooperate to control the breathing of genomic nucleosomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009013}, doi = {10.1371/JOURNAL.PCBI.1009013}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HuertasSC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Hunter-ZinckSVB21, author = {Haley S. Hunter{-}Zinck and Alexandre Fioravante de Siqueira and Valeri N. Vasquez and Richard Barnes and Ciera C. Martinez}, title = {Ten simple rules on writing clean and reliable open-source scientific software}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009481}, doi = {10.1371/JOURNAL.PCBI.1009481}, timestamp = {Wed, 30 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Hunter-ZinckSVB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/IkedaMI21, author = {Muneki Ikeda and Hirotaka Matsumoto and Eduardo J. Izquierdo}, title = {Persistent thermal input controls steering behavior in Caenorhabditis elegans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007916}, doi = {10.1371/JOURNAL.PCBI.1007916}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/IkedaMI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/IkegamiGGYOK21, author = {Tsuyoshi Ikegami and Gowrishankar Ganesh and Tricia L. Gibo and Toshinori Yoshioka and Rieko Osu and Mitsuo Kawato}, title = {Hierarchical motor adaptations negotiate failures during force field learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008481}, doi = {10.1371/JOURNAL.PCBI.1008481}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/IkegamiGGYOK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/IllingworthW21, author = {Sam Illingworth and Paul Wake}, title = {Ten simple rules for designing analogue science games}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009009}, doi = {10.1371/JOURNAL.PCBI.1009009}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/IllingworthW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ImotoSNHISIKOIS21, author = {Daisuke Imoto and Nen Saito and Akihiko Nakajima and Gen Honda and Motohiko Ishida and Toyoko Sugita and Sayaka Ishihara and Koko Katagiri and Chika Okimura and Yoshiaki Iwadate and Satoshi Sawai}, title = {Comparative mapping of crawling-cell morphodynamics in deep learning-based feature space}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009237}, doi = {10.1371/JOURNAL.PCBI.1009237}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ImotoSNHISIKOIS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/IslamW21, author = {Sabrina Islam and Christine A. Wells}, title = {Ten simple rules for navigating the computational aspect of an interdisciplinary PhD}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008554}, doi = {10.1371/JOURNAL.PCBI.1008554}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/IslamW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ItoSLF21, author = {Shinya Ito and Yufei Si and Alan M. Litke and David A. Feldheim}, title = {Nonlinear visuoauditory integration in the mouse superior colliculus}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009181}, doi = {10.1371/JOURNAL.PCBI.1009181}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ItoSLF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ItoT21, author = {Yoshiki Ito and Taro Toyoizumi}, title = {Learning poly-synaptic paths with traveling waves}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008700}, doi = {10.1371/JOURNAL.PCBI.1008700}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ItoT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JabreBME21, author = {Loay Jabre and Catherine Bannon and J. Scott P. McCain and Yana Eglit}, title = {Ten simple rules for choosing a PhD supervisor}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009330}, doi = {10.1371/JOURNAL.PCBI.1009330}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JabreBME21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JacksonKW21, author = {Michael Jackson and Kostas Kavoussanakis and Edward W. J. Wallace}, title = {Using prototyping to choose a bioinformatics workflow management system}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008622}, doi = {10.1371/JOURNAL.PCBI.1008622}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JacksonKW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JacquerieD21, author = {Kathleen Jacquerie and Guillaume Drion}, title = {Robust switches in thalamic network activity require a timescale separation between sodium and T-type calcium channel activations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008997}, doi = {10.1371/JOURNAL.PCBI.1008997}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JacquerieD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JaegerEGT21, author = {Karoline Horgmo J{\ae}ger and Andrew G. Edwards and Wayne R. Giles and Aslak Tveito}, title = {A computational method for identifying an optimal combination of existing drugs to repair the action potentials of {SQT1} ventricular myocytes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009233}, doi = {10.1371/JOURNAL.PCBI.1009233}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/JaegerEGT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JaegerWT21, author = {Karoline Horgmo J{\ae}ger and Samuel Wall and Aslak Tveito}, title = {Computational prediction of drug response in short {QT} syndrome type 1 based on measurements of compound effect in stem cell-derived cardiomyocytes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008089}, doi = {10.1371/JOURNAL.PCBI.1008089}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/JaegerWT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JagannathanHT21, author = {N. Suhas Jagannathan and Christopher W. V. Hogue and Lisa Tucker{-}Kellogg}, title = {Computational modeling suggests binding-induced expansion of Epsin disordered regions upon association with {AP2}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008474}, doi = {10.1371/JOURNAL.PCBI.1008474}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/JagannathanHT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JagatapPJS21, author = {Akshay Jagatap and Simran Purokayastha and Hritik Jain and Sridharan Devarajan}, title = {Neurally-constrained modeling of human gaze strategies in a change blindness task}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009322}, doi = {10.1371/JOURNAL.PCBI.1009322}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JagatapPJS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Janes21, author = {Kevin A. Janes}, title = {Ten simple rules for being a faculty advocate of first-year graduate students}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009379}, doi = {10.1371/JOURNAL.PCBI.1009379}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Janes21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JangPSP21, author = {Hankyu Jang and Philip M. Polgreen and Alberto M. Segre and Sriram V. Pemmaraju}, title = {{COVID-19} modeling and non-pharmaceutical interventions in an outpatient dialysis unit}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009177}, doi = {10.1371/JOURNAL.PCBI.1009177}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JangPSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JanuleviciusD21, author = {Albertas Janulevicius and G. Sander van Doorn}, title = {Selection for rapid uptake of scarce or fluctuating resource explains vulnerability of glycolysis to imbalance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008547}, doi = {10.1371/JOURNAL.PCBI.1008547}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JanuleviciusD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JaoC21, author = {Justin Jao and Annie Vogel Ciernia}, title = {MGEnrichment: {A} web application for microglia gene list enrichment analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009160}, doi = {10.1371/JOURNAL.PCBI.1009160}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JaoC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JaroszewskiIASG21, author = {Lukasz Jaroszewski and Mallika Iyer and Arghavan Alisoltani and Mayya Sedova and Adam Godzik}, title = {The interplay of SARS-CoV-2 evolution and constraints imposed by the structure and functionality of its proteins}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009147}, doi = {10.1371/JOURNAL.PCBI.1009147}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JaroszewskiIASG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JaylesSK21, author = {Bertrand Jayles and Cl{\'{e}}ment Sire and Ralf H. J. M. Kurvers}, title = {Crowd control: Reducing individual estimation bias by sharing biased social information}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009590}, doi = {10.1371/JOURNAL.PCBI.1009590}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JaylesSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JespersHISWAG21, author = {Willem Jespers and Laura H. Heitman and Adriaan P. IJzerman and Eddy Sotelo and Gerard J. P. van Westen and Johan {\AA}qvist and Hugo Guti{\'{e}}rrez{-}de{-}Ter{\'{a}}n}, title = {Deciphering conformational selectivity in the {A2A} adenosine {G} protein-coupled receptor by free energy simulations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009152}, doi = {10.1371/JOURNAL.PCBI.1009152}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JespersHISWAG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JiaXYL21, author = {Shanshan Jia and Dajun Xing and Zhaofei Yu and Jian K. Liu}, title = {Dissecting cascade computational components in spiking neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009640}, doi = {10.1371/JOURNAL.PCBI.1009640}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JiaXYL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JiangGBPC21, author = {Zhisheng Jiang and Serena F. Generoso and Marta Badia and Bernhard Payer and Lucas B. Carey}, title = {A conserved expression signature predicts growth rate and reveals cell {\&} lineage-specific differences}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009582}, doi = {10.1371/JOURNAL.PCBI.1009582}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JiangGBPC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JiangL21, author = {Linnie Jiang and Ashok Litwin{-}Kumar}, title = {Models of heterogeneous dopamine signaling in an insect learning and memory center}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009205}, doi = {10.1371/JOURNAL.PCBI.1009205}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JiangL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JiangLL21, author = {Yao Jiang and Hui{-}Fang Liu and Rong Liu}, title = {Systematic comparison and prediction of the effects of missense mutations on protein-DNA and protein-RNA interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008951}, doi = {10.1371/JOURNAL.PCBI.1008951}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JiangLL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JiangZ21, author = {Zhongling Jiang and Bin Zhang}, title = {On the role of transcription in positioning nucleosomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008556}, doi = {10.1371/JOURNAL.PCBI.1008556}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JiangZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JiaoSF21, author = {Jing Jiao and Gonzalo P. Su{\'{a}}rez and Nina H. Fefferman}, title = {How public reaction to disease information across scales and the impacts of vector control methods influence disease prevalence and control efficacy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008762}, doi = {10.1371/JOURNAL.PCBI.1008762}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JiaoSF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Jimenez-Sanchez21, author = {Juan Jim{\'{e}}nez{-}S{\'{a}}nchez and {\'{A}}lvaro Mart{\'{\i}}nez{-}Rubio and Anton Popov and Juli{\'{a}}n P{\'{e}}rez{-}Beteta and Youness Azimzade and David Molina{-}Garc{\'{\i}}a and Juan Belmonte{-}Beitia and Gabriel Fern{\'{a}}ndez Calvo and V{\'{\i}}ctor M. P{\'{e}}rez{-}Garc{\'{\i}}a}, title = {A mesoscopic simulator to uncover heterogeneity and evolutionary dynamics in tumors}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008266}, doi = {10.1371/JOURNAL.PCBI.1008266}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Jimenez-Sanchez21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JinG21, author = {Fan Jin and Frauke Gr{\"{a}}ter}, title = {How multisite phosphorylation impacts the conformations of intrinsically disordered proteins}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008939}, doi = {10.1371/JOURNAL.PCBI.1008939}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JinG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JinGW21, author = {Qingchu Jin and Joseph L. Greenstein and Raimond L. Winslow}, title = {Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009536}, doi = {10.1371/JOURNAL.PCBI.1009536}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JinGW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JohnAOB21, author = {Akhil John and Carlos Aleluia and A. John van Opstal and Alexandre Bernardino}, title = {Modelling 3D saccade generation by feedforward optimal control}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008975}, doi = {10.1371/JOURNAL.PCBI.1008975}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JohnAOB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JohnsonBHPPS21, author = {Ruth Johnson and Kathryn S. Burch and Kangcheng Hou and Mario Paciuc and Bogdan Pasaniuc and Sriram Sankararaman}, title = {Estimation of regional polygenicity from {GWAS} provides insights into the genetic architecture of complex traits}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009483}, doi = {10.1371/JOURNAL.PCBI.1009483}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JohnsonBHPPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JokinenHMHL21, author = {Emmi Jokinen and Jani Huuhtanen and Satu Mustjoki and Markus Heinonen and Harri L{\"{a}}hdesm{\"{a}}ki}, title = {Predicting recognition between {T} cell receptors and epitopes with {TCRGP}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008814}, doi = {10.1371/JOURNAL.PCBI.1008814}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JokinenHMHL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JolyCG21, author = {James H. Joly and Brandon T. L. Chew and Nicholas A. Graham}, title = {The landscape of metabolic pathway dependencies in cancer cell lines}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008942}, doi = {10.1371/JOURNAL.PCBI.1008942}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JolyCG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/JuraszBCW21, author = {Jakub Jurasz and Maciej Baginski and Jacek Czub and Milosz Wiecz{\'{o}}r}, title = {Molecular mechanism of proton-coupled ligand translocation by the bacterial efflux pump EmrE}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009454}, doi = {10.1371/JOURNAL.PCBI.1009454}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/JuraszBCW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KachalovNBSSKHW21, author = {Viacheslav N. Kachalov and Huyen Nguyen and Suraj Balakrishna and Luisa Salazar{-}Vizcaya and Rami Sommerstein and Stefan P. Kuster and Anthony Hauser and Pia Abel zur Wiesch and Eili Y. Klein and Roger D. Kouyos}, title = {Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008446}, doi = {10.1371/JOURNAL.PCBI.1008446}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KachalovNBSSKHW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KajiwaraNGKIAS21, author = {Motoki Kajiwara and Ritsuki Nomura and Felix Goetze and Masanori Kawabata and Yoshikazu Isomura and Tatsuya Akutsu and Masanori Shimono}, title = {Inhibitory neurons exhibit high controlling ability in the cortical microconnectome}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008846}, doi = {10.1371/JOURNAL.PCBI.1008846}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KajiwaraNGKIAS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KaliaMGPR21, author = {Manu Kalia and Hil G. E. Meijer and Stephan A. van Gils and Michel J. A. M. van Putten and Christine R. Rose}, title = {Ion dynamics at the energy-deprived tripartite synapse}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009019}, doi = {10.1371/JOURNAL.PCBI.1009019}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KaliaMGPR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KalkauskasPSGBG21, author = {Antanas Kalkauskas and Umberto Perron and Yuxuan Sun and Nick Goldman and Guy Baele and St{\'{e}}phane Guindon and Nicola De Maio}, title = {Sampling bias and model choice in continuous phylogeography: Getting lost on a random walk}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008561}, doi = {10.1371/JOURNAL.PCBI.1008561}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KalkauskasPSGBG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KalkusBAM21, author = {Antonina Kalkus and Joy Barrett and Theyjasvi Ashok and Brian R. Morton}, title = {Evidence from simulation studies for selective constraints on the codon usage of the Angiosperm psbA gene}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009535}, doi = {10.1371/JOURNAL.PCBI.1009535}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KalkusBAM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KalmN21, author = {Kristjan Kalm and Dennis Norris}, title = {Sequence learning recodes cortical representations instead of strengthening initial ones}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008969}, doi = {10.1371/JOURNAL.PCBI.1008969}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KalmN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KamedaAT21, author = {Takeru Kameda and Katsura Asano and Yuichi Togashi}, title = {Free energy landscape of {RNA} binding dynamics in start codon recognition by eukaryotic ribosomal pre-initiation complex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009068}, doi = {10.1371/JOURNAL.PCBI.1009068}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KamedaAT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KannanFLMK21, author = {Suraj Kannan and Michael Farid and Brian L. Lin and Matthew Miyamoto and Chulan Kwon}, title = {Transcriptomic entropy benchmarks stem cell-derived cardiomyocyte maturation against endogenous tissue at single cell level}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009305}, doi = {10.1371/JOURNAL.PCBI.1009305}, timestamp = {Tue, 28 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KannanFLMK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KaplaRBSC21, author = {Jon Kapla and Ismael Rodriguez{-}Espigares and Flavio Ballante and Jana Selent and Jens Carlsson}, title = {Can molecular dynamics simulations improve the structural accuracy and virtual screening performance of {GPCR} models?}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008936}, doi = {10.1371/JOURNAL.PCBI.1008936}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KaplaRBSC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KarimMDMU21, author = {Md. Shahriar Karim and Aasakiran Madamanchi and James A. Dutko and Mary C. Mullins and David M. Umulis}, title = {Heterodimer-heterotetramer formation mediates enhanced sensor activity in a biophysical model for {BMP} signaling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009422}, doi = {10.1371/JOURNAL.PCBI.1009422}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KarimMDMU21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KarollusAG21, author = {Alexander Karollus and Ziga Avsec and Julien Gagneur}, title = {Predicting mean ribosome load for 5'UTR of any length using deep learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008982}, doi = {10.1371/JOURNAL.PCBI.1008982}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KarollusAG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KatahiraT21, author = {Kentaro Katahira and Asako Toyama}, title = {Revisiting the importance of model fitting for model-based fMRI: It does matter in computational psychiatry}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008738}, doi = {10.1371/JOURNAL.PCBI.1008738}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KatahiraT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KavcicTB21, author = {Bor Kavcic and Gasper Tkacik and Tobias Bollenbach}, title = {Minimal biophysical model of combined antibiotic action}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008529}, doi = {10.1371/JOURNAL.PCBI.1008529}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KavcicTB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KeDYGM21, author = {Qian Ke and Wikum Dinalankara and Laurent Younes and Donald Geman and Luigi Marchionni}, title = {Efficient representations of tumor diversity with paired {DNA-RNA} aberrations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008944}, doi = {10.1371/JOURNAL.PCBI.1008944}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KeDYGM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KeelingHGPGHLMT21, author = {Matt J. Keeling and Edward M. Hill and Erin E. Gorsich and Bridget S. Penman and Glen Guyver{-}Fletcher and Alex Holmes and Trystan Leng and Hector McKimm and Massimiliano Tamborrino and Louise Dyson and Michael J. Tildesley}, title = {Predictions of {COVID-19} dynamics in the {UK:} Short-term forecasting and analysis of potential exit strategies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008619}, doi = {10.1371/JOURNAL.PCBI.1008619}, timestamp = {Thu, 05 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KeelingHGPGHLMT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KerrSMARHNCSHGJ21, author = {Cliff C. Kerr and Robyn M. Stuart and Dina Mistry and Romesh G. Abeysuriya and Katherine Rosenfeld and Gregory R. Hart and Rafael C. N{\'{u}}{\~{n}}ez and Jamie A. Cohen and Prashanth Selvaraj and Brittany Hagedorn and Lauren George and Michal Jastrzebski and Amanda S. Izzo and Greer Fowler and Anna Palm{\'{e}}r and Dominic Delport and Nick Scott and Sherrie L. Kelly and Caroline S. Bennette and Bradley G. Wagner and Stewart T. Chang and Assaf P. Oron and Edward A. Wenger and Jasmina Panovska{-}Griffiths and Michael Famulare and Daniel J. Klein}, title = {Covasim: An agent-based model of {COVID-19} dynamics and interventions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009149}, doi = {10.1371/JOURNAL.PCBI.1009149}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KerrSMARHNCSHGJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KeuninckxC21, author = {Lars Keuninckx and Axel Cleeremans}, title = {The color phi phenomenon: Not so special, after all?}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009344}, doi = {10.1371/JOURNAL.PCBI.1009344}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KeuninckxC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KhakzadHKCBNNMM21, author = {Hamed Khakzad and Lotta Happonen and Yasaman Karami and Sounak Chowdhury and Gizem Ert{\"{u}}rk Bergdahl and Michael Nilges and Guy Tran Van Nhieu and Johan Malmstr{\"{o}}m and Lars Malmstr{\"{o}}m}, title = {Structural determination of Streptococcus pyogenes {M1} protein interactions with human immunoglobulin {G} using integrative structural biology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008169}, doi = {10.1371/JOURNAL.PCBI.1008169}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KhakzadHKCBNNMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KharcheJCS21, author = {Shalmali Kharche and Manali Joshi and Amitabha Chattopadhyay and Durba Sengupta}, title = {Conformational plasticity and dynamic interactions of the N-terminal domain of the chemokine receptor {CXCR1}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008593}, doi = {10.1371/JOURNAL.PCBI.1008593}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KharcheJCS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KharerinB21, author = {Hungyo Kharerin and Lu Bai}, title = {Thermodynamic modeling of genome-wide nucleosome depleted regions in yeast}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008560}, doi = {10.1371/JOURNAL.PCBI.1008560}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KharerinB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KhawSW21, author = {Mel W. Khaw and Luminita Stevens and Michael Woodford}, title = {Individual differences in the perception of probability}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008871}, doi = {10.1371/JOURNAL.PCBI.1008871}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KhawSW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KimLYPJ21, author = {Jaejoong Kim and Sang Wan Lee and Seokho Yoon and Haeorm Park and Bumseok Jeong}, title = {Neurocomputational mechanism of controllability inference under a multi-agent setting}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009549}, doi = {10.1371/JOURNAL.PCBI.1009549}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KimLYPJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KimNR21, author = {Ruby Kim and H. Frederik Nijhout and Michael C. Reed}, title = {One-carbon metabolism during the menstrual cycle and pregnancy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009708}, doi = {10.1371/JOURNAL.PCBI.1009708}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KimNR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KingETGCLC21, author = {Jasia King and Kerba{\"{\i}} Sa{\"{\i}}d Eroum{\'{e}} and Roman Truckenm{\"{u}}ller and Stefan Giselbrecht and Ann E. Cowan and Leslie M. Loew and Aur{\'{e}}lie Carlier}, title = {Ten steps to investigate a cellular system with mathematical modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008921}, doi = {10.1371/JOURNAL.PCBI.1008921}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KingETGCLC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KingS21, author = {Sean B. King and Mona Singh}, title = {Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009560}, doi = {10.1371/JOURNAL.PCBI.1009560}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KingS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KingsleyCRR21, author = {Jessica L. Kingsley and James R. Costello and Natarajan Raghunand and Katarzyna A. Rejniak}, title = {Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009206}, doi = {10.1371/JOURNAL.PCBI.1009206}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KingsleyCRR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KinneyCL21, author = {Adrienne C. Kinney and Sean Current and Joceline Lega}, title = {Aedes-AI: Neural network models of mosquito abundance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009467}, doi = {10.1371/JOURNAL.PCBI.1009467}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KinneyCL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KlamserR21, author = {Pascal P. Klamser and Pawel Romanczuk}, title = {Collective predator evasion: Putting the criticality hypothesis to the test}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008832}, doi = {10.1371/JOURNAL.PCBI.1008832}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KlamserR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KleinSTK21, author = {Natalie Klein and Joshua H. Siegle and Tobias Teichert and Robert E. Kass}, title = {Cross-population coupling of neural activity based on Gaussian process current source densities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009601}, doi = {10.1371/JOURNAL.PCBI.1009601}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KleinSTK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KleshninaSFC21, author = {Maria Kleshnina and Sabrina S. Streipert and Jerzy A. Filar and Krishnendu Chatterjee}, title = {Mistakes can stabilise the dynamics of rock-paper-scissors games}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008523}, doi = {10.1371/JOURNAL.PCBI.1008523}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KleshninaSFC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KnowltonZHRC21, author = {Christopher J. Knowlton and Tabea Ines Ziouziou and Niklas Hammer and Jochen Roeper and Carmen C. Canavier}, title = {Inactivation mode of sodium channels defines the different maximal firing rates of conventional versus atypical midbrain dopamine neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009371}, doi = {10.1371/JOURNAL.PCBI.1009371}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KnowltonZHRC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KoideKBTT21, author = {Hiroki Koide and Noriyuki Kodera and Shveta Bisht and Shoji Takada and Tsuyoshi Terakawa}, title = {Modeling of {DNA} binding to the condensin hinge domain using molecular dynamics simulations guided by atomic force microscopy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009265}, doi = {10.1371/JOURNAL.PCBI.1009265}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KoideKBTT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KongSB21, author = {Jennifer H. Kong and Latishya J. Steele and Crystal M. Botham}, title = {Ten simple rules for writing compelling recommendation letters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008656}, doi = {10.1371/JOURNAL.PCBI.1008656}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KongSB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KonopkaNS21, author = {Tomasz Konopka and Sandra Ng and Damian Smedley}, title = {Diffusion enables integration of heterogeneous data and user-driven learning in a desktop knowledge-base}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009283}, doi = {10.1371/JOURNAL.PCBI.1009283}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KonopkaNS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KontioPS21, author = {Juho A. J. Kontio and Tanja Pyh{\"{a}}j{\"{a}}rvi and Mikko J. Sillanp{\"{a}}{\"{a}}}, title = {Model guided trait-specific co-expression network estimation as a new perspective for identifying molecular interactions and pathways}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008960}, doi = {10.1371/JOURNAL.PCBI.1008960}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KontioPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KooMPAP21, author = {Peter K. Koo and Antonio Majdandzic and Matthew Ploenzke and Praveen Anand and Steffan B. Paul}, title = {Global importance analysis: An interpretability method to quantify importance of genomic features in deep neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008925}, doi = {10.1371/JOURNAL.PCBI.1008925}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KooMPAP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KopfFSC21, author = {Andreas Kopf and Vincent Fortuin and Vignesh Ram Somnath and Manfred Claassen}, title = {Mixture-of-Experts Variational Autoencoder for clustering and generating from similarity-based representations on single cell data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009086}, doi = {10.1371/JOURNAL.PCBI.1009086}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KopfFSC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KosGUGRC21, author = {Pavel I. Kos and Aleksandra A. Galitsyna and Sergey V. Ulianov and Mikhail S. Gelfand and Sergey V. Razin and Alexander V. Chertovich}, title = {Perspectives for the reconstruction of 3D chromatin conformation using single cell Hi-C data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009546}, doi = {10.1371/JOURNAL.PCBI.1009546}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KosGUGRC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KostaD21, author = {Sarah Kosta and Pierre C. Dauby}, title = {Frank-Starling mechanism, fluid responsiveness, and length-dependent activation: Unravelling the multiscale behaviors with an in silico analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009469}, doi = {10.1371/JOURNAL.PCBI.1009469}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KostaD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KoukouliWDP21, author = {Evanthia Koukouli and Dennis Wang and Frank Dondelinger and Juhyun Park}, title = {A regularized functional regression model enabling transcriptome-wide dosage-dependent association study of cancer drug response}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008066}, doi = {10.1371/JOURNAL.PCBI.1008066}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KoukouliWDP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KoyamaHS21, author = {Shinsuke Koyama and Taiki Horie and Shigeru Shinomoto}, title = {Estimating the time-varying reproduction number of {COVID-19} with a state-space method}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008679}, doi = {10.1371/JOURNAL.PCBI.1008679}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KoyamaHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KrahH21, author = {Laurens H. J. Krah and Rutger Hermsen}, title = {The effect of natural selection on the propagation of protein expression noise to bacterial growth}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009208}, doi = {10.1371/JOURNAL.PCBI.1009208}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KrahH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KregerKW21, author = {Jesse Kreger and Natalia L. Komarova and Dominik Wodarz}, title = {A hybrid stochastic-deterministic approach to explore multiple infection and evolution in {HIV}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009713}, doi = {10.1371/JOURNAL.PCBI.1009713}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KregerKW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KsanderKM21, author = {John Ksander and Donald B. Katz and Paul Miller}, title = {A model of naturalistic decision making in preference tests}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009012}, doi = {10.1371/JOURNAL.PCBI.1009012}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KsanderKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KugaICWFK21, author = {Kazuki Kuga and Kazuhide Ito and Wenhao Chen and Ping Wang and Jeff Fowles and Kazukiyo Kumagai}, title = {Secondary indoor air pollution and passive smoking associated with cannabis smoking using electric cigarette device-demonstrative in silico study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009004}, doi = {10.1371/JOURNAL.PCBI.1009004}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KugaICWFK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KuipersMJSWMFTB21, author = {Jack Kuipers and Ariane L. Moore and Katharina Jahn and Peter Schraml and Feng Wang and Kiyomi Morita and P. Andrew Futreal and Koichi Takahashi and Christian Beisel and Holger Moch and Niko Beerenwinkel}, title = {Statistical tests for intra-tumour clonal co-occurrence and exclusivity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009036}, doi = {10.1371/JOURNAL.PCBI.1009036}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KuipersMJSWMFTB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KumarHRSM21, author = {Mari Ganesh Kumar and Ming Hu and Aadhirai Ramanujan and Mriganka Sur and Hema A. Murthy}, title = {Functional parcellation of mouse visual cortex using statistical techniques reveals response-dependent clustering of cortical processing areas}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008548}, doi = {10.1371/JOURNAL.PCBI.1008548}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KumarHRSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KunkelWP21, author = {Amber Kunkel and Michael White and Patrice Piola}, title = {Novel anti-malarial drug strategies to prevent artemisinin partner drug resistance: {A} model-based analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008850}, doi = {10.1371/JOURNAL.PCBI.1008850}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/KunkelWP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KuosmanenCNBMM21, author = {Teemu Kuosmanen and Johannes Cairns and Robert Noble and Niko Beerenwinkel and Tommi Mononen and Ville Mustonen}, title = {Drug-induced resistance evolution necessitates less aggressive treatment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009418}, doi = {10.1371/JOURNAL.PCBI.1009418}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KuosmanenCNBMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KurkjianAM21, author = {Helen M. Kurkjian and M. Javad Akbari and Babak Momeni}, title = {The impact of interactions on invasion and colonization resistance in microbial communities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008643}, doi = {10.1371/JOURNAL.PCBI.1008643}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KurkjianAM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/KuruBT21, author = {Halil Ibrahim Kuru and Mustafa Buyukozkan and Oznur Tastan}, title = {{PRER:} {A} patient representation with pairwise relative expression of proteins on biological networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008998}, doi = {10.1371/JOURNAL.PCBI.1008998}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/KuruBT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LP21, author = {Daniel A. Burbano L. and Maurizio Porfiri}, title = {Modeling multi-sensory feedback control of zebrafish in a flow}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008644}, doi = {10.1371/JOURNAL.PCBI.1008644}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LagacheHPFY21, author = {Thibault Lagache and Alison Hanson and Jes{\'{u}}s E. P{\'{e}}rez{-}Ortega and Adrienne Fairhall and Rafael Yuste}, title = {Tracking calcium dynamics from individual neurons in behaving animals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009432}, doi = {10.1371/JOURNAL.PCBI.1009432}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LagacheHPFY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LalLTSR21, author = {Avantika Lal and Keli Liu and Robert Tibshirani and Arend Sidow and Daniele Ramazzotti}, title = {De novo mutational signature discovery in tumor genomes using SparseSignatures}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009119}, doi = {10.1371/JOURNAL.PCBI.1009119}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LalLTSR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LallRB21, author = {Snehalika Lall and Sumanta Ray and Sanghamitra Bandyopadhyay}, title = {RgCop-A regularized copula based method for gene selection in single-cell RNA-seq data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009464}, doi = {10.1371/JOURNAL.PCBI.1009464}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LallRB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LamBLO21, author = {Su Datt Lam and M. Madan Babu and Jonathan G. Lees and Christine A. Orengo}, title = {Biological impact of mutually exclusive exon switching}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008708}, doi = {10.1371/JOURNAL.PCBI.1008708}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LamBLO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LangeCBYH21, author = {Richard D. Lange and Ankani Chattoraj and Jeffrey M. Beck and Jacob L. Yates and Ralf M. Haefner}, title = {A confirmation bias in perceptual decision-making due to hierarchical approximate inference}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009517}, doi = {10.1371/JOURNAL.PCBI.1009517}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LangeCBYH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LangeF21, author = {Steffen Lange and Benjamin M. Friedrich}, title = {Sperm chemotaxis in marine species is optimal at physiological flow rates according theory of filament surfing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008826}, doi = {10.1371/JOURNAL.PCBI.1008826}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LangeF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LangthalerRSPSZ21, author = {Sonja Langthaler and Theresa Rienm{\"{u}}ller and Susanne Scheruebel and Brigitte Pelzmann and Niroj Shrestha and Klaus Zorn{-}Pauly and Wolfgang Schreibmayer and Andrew Koff and Christian Baumgartner}, title = {{A549} in-silico 1.0: {A} first computational model to simulate cell cycle dependent ion current modulation in the human lung adenocarcinoma}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009091}, doi = {10.1371/JOURNAL.PCBI.1009091}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LangthalerRSPSZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LannelongueGBI21, author = {Lo{\"{\i}}c Lannelongue and Jason Grealey and Alex Bateman and Michael Inouye}, title = {Ten simple rules to make your computing more environmentally sustainable}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009324}, doi = {10.1371/JOURNAL.PCBI.1009324}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LannelongueGBI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LarischGTH21, author = {Ren{\'{e}} Larisch and Lorenz G{\"{o}}nner and Michael Teichmann and Fred H. Hamker}, title = {Sensory coding and contrast invariance emerge from the control of plastic inhibition over emergent selectivity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009566}, doi = {10.1371/JOURNAL.PCBI.1009566}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LarischGTH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LarsenMMHK21, author = {Joseph R. Larsen and Margaret R. Martin and John D. Martin and James B. Hicks and Peter Kuhn}, title = {Modeling the onset of symptoms of {COVID-19:} Effects of SARS-CoV-2 variant}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009629}, doi = {10.1371/JOURNAL.PCBI.1009629}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LarsenMMHK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LarsenTJS21, author = {Andreas Haahr Larsen and Lilya Tata and Laura H. John and Mark S. P. Sansom}, title = {Membrane-binding mechanism of the {EEA1} {FYVE} domain revealed by multi-scale molecular dynamics simulations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008807}, doi = {10.1371/JOURNAL.PCBI.1008807}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LarsenTJS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LarssonZHRJDHKS21, author = {Anton J. M. Larsson and Christoph Ziegenhain and Michael Hagemann{-}Jensen and Bj{\"{o}}rn Reinius and Tina Jacob and Tim Dalessandri and Gert{-}Jan Hendriks and Maria Kasper and Rickard Sandberg}, title = {Transcriptional bursts explain autosomal random monoallelic expression and affect allelic imbalance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008772}, doi = {10.1371/JOURNAL.PCBI.1008772}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LarssonZHRJDHKS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LauroKM21, author = {Francesco Di Lauro and Istv{\'{a}}n Z. Kiss and Joel C. Miller}, title = {Optimal timing of one-shot interventions for epidemic control}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008763}, doi = {10.1371/JOURNAL.PCBI.1008763}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LauroKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LebelDVGDG21, author = {Paul Lebel and Rebekah Dial and Venkata N. P. Vemuri and Valentina Garcia and Joseph L. DeRisi and Rafael G{\'{o}}mez{-}Sj{\"{o}}berg}, title = {Label-free imaging and classification of live P. falciparum enables high performance parasitemia quantification without fixation or staining}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009257}, doi = {10.1371/JOURNAL.PCBI.1009257}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LebelDVGDG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LebovichYSLR21, author = {Lior Lebovich and Michael Yunerman and Viviana Scaiewicz and Yonatan Loewenstein and Dan Rokni}, title = {Paradoxical relationship between speed and accuracy in olfactory figure-background segregation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009674}, doi = {10.1371/JOURNAL.PCBI.1009674}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LebovichYSLR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Lechon-AlonsoCC21, author = {Pablo Lech{\'{o}}n{-}Alonso and Tom Clegg and Jacob Cook and Thomas P. Smith and Samraat Pawar}, title = {The role of competition versus cooperation in microbial community coalescence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009584}, doi = {10.1371/JOURNAL.PCBI.1009584}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Lechon-AlonsoCC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeeBFWOSCM21, author = {Bruce Y. Lee and Sarah M. Bartsch and Marie C. Ferguson and Patrick T. Wedlock and Kelly J. O'Shea and Sheryl S. Siegmund and Sarah N. Cox and James A. McKinnell}, title = {The value of decreasing the duration of the infectious period of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008470}, doi = {10.1371/JOURNAL.PCBI.1008470}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeeBFWOSCM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeeKK21, author = {Junho Lee and Jin Su Kim and Yangjin Kim}, title = {Atorvastatin-mediated rescue of cancer-related cognitive changes in combined anticancer therapies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009457}, doi = {10.1371/JOURNAL.PCBI.1009457}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeeKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeeL21, author = {Hyun Gyu Lee and Kyoung J. Lee}, title = {Neighbor-enhanced diffusivity in dense, cohesive cell populations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009447}, doi = {10.1371/JOURNAL.PCBI.1009447}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeeL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeeLLK21, author = {Junho Lee and Donggu Lee and Sean Lawler and Yangjin Kim}, title = {Role of neutrophil extracellular traps in regulation of lung cancer invasion and metastasis: Structural insights from a computational model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008257}, doi = {10.1371/JOURNAL.PCBI.1008257}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeeLLK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeeM21, author = {Jennifer Laura Lee and Wei Ji Ma}, title = {Point-estimating observer models for latent cause detection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009159}, doi = {10.1371/JOURNAL.PCBI.1009159}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeeM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeiningerSMNOR21, author = {Elizabeth Leininger and Kelly Shaw and Niema Moshiri and Kelly Neiles and Getiria Onsongo and Anna M. Ritz}, title = {Ten simple rules for attending your first conference}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009133}, doi = {10.1371/JOURNAL.PCBI.1009133}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeiningerSMNOR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeleoS21, author = {Eilam Goldenberg Leleo and Idan Segev}, title = {Burst control: Synaptic conditions for burst generation in cortical layer 5 pyramidal neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009558}, doi = {10.1371/JOURNAL.PCBI.1009558}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeleoS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LemaireDKPSM21, author = {Louisiane Lemaire and Mathieu Desroches and Martin Krupa and Lara Pizzamiglio and Paolo Scalmani and Massimo Mantegazza}, title = {Modeling NaV1.1/SCN1A sodium channel mutations in a microcircuit with realistic ion concentration dynamics suggests differential GABAergic mechanisms leading to hyperexcitability in epilepsy and hemiplegic migraine}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009239}, doi = {10.1371/JOURNAL.PCBI.1009239}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LemaireDKPSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LengYRS21, author = {Xiamin Leng and Debbie Yee and Harrison Ritz and Amitai Shenhav}, title = {Dissociable influences of reward and punishment on adaptive cognitive control}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009737}, doi = {10.1371/JOURNAL.PCBI.1009737}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LengYRS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeonardSCSC21, author = {Michelle Leonard and Suzanne Stapleton and Perry Collins and Terry Kit Selfe and Tara Tobin Cataldo}, title = {Ten simple rules for avoiding predatory publishing scams}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009377}, doi = {10.1371/JOURNAL.PCBI.1009377}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeonardSCSC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LererSK21, author = {Alejandro Lerer and Hans Sup{\`{e}}r and Matthias S. Keil}, title = {Dynamic decorrelation as a unifying principle for explaining a broad range of brightness phenomena}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007907}, doi = {10.1371/JOURNAL.PCBI.1007907}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LererSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeungCST21, author = {Angus Leung and Dror Cohen and Bruno van Swinderen and Naotsugu Tsuchiya}, title = {Integrated information structure collapses with anesthetic loss of conscious arousal in Drosophila melanogaster}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008722}, doi = {10.1371/JOURNAL.PCBI.1008722}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeungCST21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiATKCN21, author = {Chenhao Li and Tamar Vered Av{-}Shalom and Jun Wei Gerald Tan and Junmei Samantha Kwah and Kern Rei Chng and Niranjan Nagarajan}, title = {BEEM-Static: Accurate inference of ecological interactions from cross-sectional microbiome data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009343}, doi = {10.1371/JOURNAL.PCBI.1009343}, timestamp = {Sun, 11 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiATKCN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiFPLL21, author = {Xinjun Li and Fan Feng and Hongxi Pu and Wai Yan Leung and Jie Liu}, title = {scHiCTools: {A} computational toolbox for analyzing single-cell Hi-C data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008978}, doi = {10.1371/JOURNAL.PCBI.1008978}, timestamp = {Mon, 23 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiFPLL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiGWZNZS21, author = {Lei Li and Zhen Gao and Yu{-}Tian Wang and Ming{-}Wen Zhang and Jian{-}Cheng Ni and Chun{-}Hou Zheng and Yansen Su}, title = {{SCMFMDA:} Predicting microRNA-disease associations based on similarity constrained matrix factorization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009165}, doi = {10.1371/JOURNAL.PCBI.1009165}, timestamp = {Tue, 14 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiGWZNZS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiJKCLFZP21, author = {Zutan Li and Hangjin Jiang and Lingpeng Kong and Yuanyuan Chen and Kun Lang and Xiaodan Fan and Liangyun Zhang and Cong Pian}, title = {Deep6mA: {A} deep learning framework for exploring similar patterns in {DNA} N6-methyladenine sites across different species}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008767}, doi = {10.1371/JOURNAL.PCBI.1008767}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiJKCLFZP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiJQZE21, author = {Zhong Li and Kaiyancheng Jiang and Shengwei Qin and Yijun Zhong and Arne Elofsson}, title = {GCSENet: {A} GCN, {CNN} and SENet ensemble model for microRNA-disease association prediction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009048}, doi = {10.1371/JOURNAL.PCBI.1009048}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiJQZE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiLLBK21, author = {He Li and Zixiang Leonardo Liu and Lu Lu and Pierre Buffet and George Em Karniadakis}, title = {How the spleen reshapes and retains young and old red blood cells: {A} computational investigation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009516}, doi = {10.1371/JOURNAL.PCBI.1009516}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiLLBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiM21, author = {Zhi{-}Wei Li and Wei Ji Ma}, title = {An uncertainty-based model of the effects of fixation on choice}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009190}, doi = {10.1371/JOURNAL.PCBI.1009190}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiMBK21, author = {Jun Li and Juliane Manitz and Enrico Bertuzzo and Eric D. Kolaczyk}, title = {Sensor-based localization of epidemic sources on human mobility networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008545}, doi = {10.1371/JOURNAL.PCBI.1008545}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiMBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiSYK21, author = {Zhuliu Li and Tianci Song and Jeongsik Yong and Rui Kuang}, title = {Imputation of spatially-resolved transcriptomes by graph-regularized tensor completion}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008218}, doi = {10.1371/JOURNAL.PCBI.1008218}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiSYK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiW21, author = {Tenglong Li and Laura F. White}, title = {Bayesian back-calculation and nowcasting for line list data during the {COVID-19} pandemic}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009210}, doi = {10.1371/JOURNAL.PCBI.1009210}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiWJZNS21, author = {Lei Li and Yu{-}Tian Wang and Cunmei Ji and Chun{-}Hou Zheng and Jian{-}Cheng Ni and Yan{-}Sen Su}, title = {{GCAEMDA:} Predicting miRNA-disease associations via graph convolutional autoencoder}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009655}, doi = {10.1371/JOURNAL.PCBI.1009655}, timestamp = {Tue, 14 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiWJZNS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiWLHZ21, author = {Yacong Li and Kuanquan Wang and Qince Li and Jules C. Hancox and Henggui Zhang}, title = {Reciprocal interaction between {IK1} and If in biological pacemakers: {A} simulation study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008177}, doi = {10.1371/JOURNAL.PCBI.1008177}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiWLHZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiY21, author = {Yao Li and Lai{-}Sang Young}, title = {Unraveling the mechanisms of surround suppression in early visual processing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008916}, doi = {10.1371/JOURNAL.PCBI.1008916}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiZBZZYZ21, author = {Yang Li and Chengxin Zhang and Eric W. Bell and Wei Zheng and Xiaogen Zhou and Dong{-}Jun Yu and Yang Zhang}, title = {Deducing high-accuracy protein contact-maps from a triplet of coevolutionary matrices through deep residual convolutional networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008865}, doi = {10.1371/JOURNAL.PCBI.1008865}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiZBZZYZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LianAGKBM21, author = {Yanbo Lian and Ali Almasi and David B. Grayden and Tatiana Kameneva and Anthony N. Burkitt and Hamish Meffin}, title = {Learning receptive field properties of complex cells in {V1}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007957}, doi = {10.1371/JOURNAL.PCBI.1007957}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LianAGKBM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiangYM21, author = {Yuzhen Liang and Chunwu Yu and Wentao Ma}, title = {The automatic parameter-exploration with a machine-learning-like approach: Powering the evolutionary modeling on the origin of life}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009761}, doi = {10.1371/JOURNAL.PCBI.1009761}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiangYM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiangZTL21, author = {Lifan Liang and Kunju Zhu and Junyan Tao and Songjian Lu}, title = {{ORN:} Inferring patient-specific dysregulation status of pathway modules in cancer with OR-gate Network}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008792}, doi = {10.1371/JOURNAL.PCBI.1008792}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiangZTL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LibbrechtCH21, author = {Maxwell W. Libbrecht and Rachel C. W. Chan and Michael M. Hoffman}, title = {Segmentation and genome annotation algorithms for identifying chromatin state and other genomic patterns}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009423}, doi = {10.1371/JOURNAL.PCBI.1009423}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LibbrechtCH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LibinWVTVH21, author = {Pieter J. K. Libin and Lander Willem and Timothy Verstraeten and Andrea Torneri and Joris Vanderlocht and Niel Hens}, title = {Assessing the feasibility and effectiveness of household-pooled universal testing to control {COVID-19} epidemics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008688}, doi = {10.1371/JOURNAL.PCBI.1008688}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LibinWVTVH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LichtingerGCR21, author = {Simon M. Lichtinger and Adiran Garaizar and Rosana Collepardo{-}Guevara and Aleks Reinhardt}, title = {Targeted modulation of protein liquid-liquid phase separation by evolution of amino-acid sequence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009328}, doi = {10.1371/JOURNAL.PCBI.1009328}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LichtingerGCR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LieberthalG21, author = {Brandon Lieberthal and Allison M. Gardner}, title = {Connectivity, reproduction number, and mobility interact to determine communities' epidemiological superspreader potential in a metapopulation network}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008674}, doi = {10.1371/JOURNAL.PCBI.1008674}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LieberthalG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LimG21, author = {Huat Chye Lim and John D. Gordan}, title = {Tumor hepatitis {B} virus {RNA} identifies a clinically and molecularly distinct subset of hepatocellular carcinoma}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008699}, doi = {10.1371/JOURNAL.PCBI.1008699}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LimG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LimMTOLKSPTYCD21, author = {Jue Tao Lim and Kenwin Maung and Sok Teng Tan and Suan Ee Ong and Jane Mingjie Lim and Joel Ruihan Koo and Haoyang Sun and Minah Park and Ken Wei Tan and Joanne Yoong and Alex R. Cook and Borame Sue Dickens}, title = {Estimating direct and spill-over impacts of political elections on {COVID-19} transmission using synthetic control methods}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008959}, doi = {10.1371/JOURNAL.PCBI.1008959}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LimMTOLKSPTYCD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LimQ21, author = {Hong Seo Lim and Peng Qiu}, title = {{JSOM:} Jointly-evolving self-organizing maps for alignment of biological datasets and identification of related clusters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008804}, doi = {10.1371/JOURNAL.PCBI.1008804}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LimQ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LimaFPYVPY21, author = {Ernesto A. B. F. Lima and Danial Faghihi and Russell Philley and Jianchen Yang and John Virostko and Caleb M. Phillips and Thomas E. Yankeelov}, title = {Bayesian calibration of a stochastic, multiscale agent-based model for predicting in vitro tumor growth}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008845}, doi = {10.1371/JOURNAL.PCBI.1008845}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LimaFPYVPY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LinAT21, author = {Tzu{-}Hao Lin and Tomonari Akamatsu and Yu Tsao}, title = {Sensing ecosystem dynamics via audio source separation: {A} case study of marine soundscapes off northeastern Taiwan}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008698}, doi = {10.1371/JOURNAL.PCBI.1008698}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LinAT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LinSTVDSK21, author = {Ya{-}Wei Eileen Lin and Tal Shnitzer and Ronen Talmon and Franz Villarroel{-}Espindola and Shruti Desai and Kurt A. Schalper and Yuval Kluger}, title = {Graph of graphs analysis for multiplexed data with application to imaging mass cytometry}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008741}, doi = {10.1371/JOURNAL.PCBI.1008741}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LinSTVDSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LindauMKABCCHMO21, author = {Stacy Tessler Lindau and Jennifer A. Makelarski and Chaitanya Kaligotla and Emily Abramsohn and David G. Beiser and Chiahung Chou and Nicholson T. Collier and Elbert S. Huang and Charles M. Macal and Jonathan Ozik and Elizabeth L. Tung}, title = {Building and experimenting with an agent-based model to study the population-level impact of CommunityRx, a clinic-based community resource referral intervention}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009471}, doi = {10.1371/JOURNAL.PCBI.1009471}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LindauMKABCCHMO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LindstromCGHT21, author = {Michael R. Lindstrom and Manuel B. Chavez and Elijah A. Gross{-}Sable and Eric Y. Hayden and David B. Teplow}, title = {From reaction kinetics to dementia: {A} simple dimer model of Alzheimer's disease etiology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009114}, doi = {10.1371/JOURNAL.PCBI.1009114}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LindstromCGHT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LingasRSG21, author = {Guillaume Lingas and Kyle Rosenke and David Safronetz and J{\'{e}}r{\'{e}}mie Guedj}, title = {Lassa viral dynamics in non-human primates treated with favipiravir or ribavirin}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008535}, doi = {10.1371/JOURNAL.PCBI.1008535}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LingasRSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LinheiroA21, author = {Raquel Linheiro and John P. Archer}, title = {CStone: {A} de novo transcriptome assembler for short-read data that identifies non-chimeric contigs based on underlying graph structure}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009631}, doi = {10.1371/JOURNAL.PCBI.1009631}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LinheiroA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiuHEKTAG21, author = {Jonathan Liu and Donald Hansen and Elizabeth Eck and Yang Joon Kim and Meghan Turner and Simon Alamos and Hernan G. Garcia}, title = {Real-time single-cell characterization of the eukaryotic transcription cycle reveals correlations between {RNA} initiation, elongation, and cleavage}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008999}, doi = {10.1371/JOURNAL.PCBI.1008999}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiuHEKTAG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiuL21, author = {Yuansheng Liu and Jinyan Li}, title = {Hamming-shifting graph of genomic short reads: Efficient construction and its application for compression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009229}, doi = {10.1371/JOURNAL.PCBI.1009229}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiuL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiuLLSP21, author = {Xianggen Liu and Yunan Luo and Pengyong Li and Sen Song and Jian Peng}, title = {Deep geometric representations for modeling effects of mutations on protein-protein binding affinity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009284}, doi = {10.1371/JOURNAL.PCBI.1009284}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiuLLSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiuSAHAZLLZPGSN21, author = {Jason Liu and Daniel J. Spakowicz and Garrett I. Ash and Rebecca Hoyd and Rohan Ahluwalia and Andrew Zhang and Shaoke Lou and Donghoon Lee and Jing Zhang and Carolyn Presley and Ann Greene and Matthew Stults{-}Kolehmainen and Laura M. Nally and Julien S. Baker and Lisa M. Fucito and Stuart A. Weinzimer and Andrew V. Papachristos and Mark Gerstein}, title = {Bayesian structural time series for biomedical sensor data: {A} flexible modeling framework for evaluating interventions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009303}, doi = {10.1371/JOURNAL.PCBI.1009303}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LiuSAHAZLLZPGSN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiuX21, author = {Qiao Liu and Lei Xie}, title = {TranSynergy: Mechanism-driven interpretable deep neural network for the synergistic prediction and pathway deconvolution of drug combinations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008653}, doi = {10.1371/JOURNAL.PCBI.1008653}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiuX21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LiuZH21, author = {Lei Liu and Bokai Zhang and Changbong Hyeon}, title = {Extracting multi-way chromatin contacts from Hi-C data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009669}, doi = {10.1371/JOURNAL.PCBI.1009669}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LiuZH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LjungholmN21, author = {Mikael Ljungholm and Dan{-}E. Nilsson}, title = {Modelling the visual world of a velvet worm}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008808}, doi = {10.1371/JOURNAL.PCBI.1008808}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LjungholmN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LloydMYEP21, author = {Colton J. Lloyd and Jonathan Monk and Laurence Yang and Ali Ebrahim and Bernhard O. Palsson}, title = {Computation of condition-dependent proteome allocation reveals variability in the macro and micro nutrient requirements for growth}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007817}, doi = {10.1371/JOURNAL.PCBI.1007817}, timestamp = {Fri, 05 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LloydMYEP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LloydSML21, author = {John P. Lloyd and Matthew B. Soellner and Sof{\'{\i}}a D. Merajver and Jun Z. Li}, title = {Impact of between-tissue differences on pan-cancer predictions of drug sensitivity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008720}, doi = {10.1371/JOURNAL.PCBI.1008720}, timestamp = {Wed, 15 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LloydSML21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LloydSMRMSRHSLN21, author = {Tessa Lloyd and Pia Steigler and Cheleka A. M. Mpande and Virginie Rozot and Boitumelo Mosito and Constance Schreuder and Timothy D. Reid and Mark Hatherill and Thomas J. Scriba and Francesca Little and Elisa Nemes and ACS Study Team}, title = {Multidimensional analysis of immune responses identified biomarkers of recent Mycobacterium tuberculosis infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009197}, doi = {10.1371/JOURNAL.PCBI.1009197}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LloydSMRMSRHSLN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LombardiJLK21, author = {Aniello Lombardi and Peter Jedlicka and Heiko J. Luhmann and Werner Kilb}, title = {Coincident glutamatergic depolarizations enhance {GABAA} receptor-dependent Cl- influx in mature and suppress Cl- efflux in immature neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008573}, doi = {10.1371/JOURNAL.PCBI.1008573}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LombardiJLK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LombardiLK21, author = {Aniello Lombardi and Heiko J. Luhmann and Werner Kilb}, title = {Modelling the spatial and temporal constrains of the GABAergic influence on neuronal excitability}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009199}, doi = {10.1371/JOURNAL.PCBI.1009199}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LombardiLK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LongCLR21, author = {Yanan Long and Qi Chen and Henrik Larsson and Andrey Rzhetsky}, title = {Observable variations in human sex ratio at birth}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009586}, doi = {10.1371/JOURNAL.PCBI.1009586}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LongCLR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LongobardiSN21, author = {Stefano Longobardi and Anna Sher and Steven A. Niederer}, title = {In silico identification of potential calcium dynamics and sarcomere targets for recovering left ventricular function in rat heart failure with preserved ejection fraction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009646}, doi = {10.1371/JOURNAL.PCBI.1009646}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LongobardiSN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Lopez-YepezMHK21, author = {Junior Samuel L{\'{o}}pez{-}Y{\'{e}}pez and Juliane Martin and Oliver J. Hulme and Duda Kvitsiani}, title = {Choice history effects in mice and humans improve reward harvesting efficiency}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009452}, doi = {10.1371/JOURNAL.PCBI.1009452}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Lopez-YepezMHK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LothACLCCOHCCBJ21, author = {Eva Loth and Jumana Ahmad and Chris Chatham and Beatriz L{\'{o}}pez and Ben Carter and Daisy Crawley and Bethany Oakley and Hannah Hayward and Jennifer Cooke and Antonia San Jos{\'{e}} C{\'{a}}ceres and Danilo Bzdok and Emily J. H. Jones and Tony Charman and Christian F. Beckmann and Thomas Bourgeron and Roberto Toro and Jan K. Buitelaar and Declan G. M. Murphy and Guillaume Dumas}, title = {The meaning of significant mean group differences for biomarker discovery}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009477}, doi = {10.1371/JOURNAL.PCBI.1009477}, timestamp = {Wed, 08 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LothACLCCOHCCBJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LouieSTZWCSG21, author = {Wilson Louie and Max W. Shen and Zakir Tahiry and Sophia Zhang and Daniel Worstell and Christopher A. Cassa and Richard I. Sherwood and David K. Gifford}, title = {Machine learning based {CRISPR} gRNA design for therapeutic exon skipping}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008605}, doi = {10.1371/JOURNAL.PCBI.1008605}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LouieSTZWCSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LouroBB21, author = {Marco Ant{\'{o}}nio Dias Louro and M{\'{o}}nica Bettencourt{-}Dias and Claudia Bank}, title = {Patterns of selection against centrosome amplification in human cell lines}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008765}, doi = {10.1371/JOURNAL.PCBI.1008765}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LouroBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LouroBC21, author = {Marco Ant{\'{o}}nio Dias Louro and M{\'{o}}nica Bettencourt{-}Dias and Jorge Carneiro}, title = {A first-takes-all model of centriole copy number control based on cartwheel elongation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008359}, doi = {10.1371/JOURNAL.PCBI.1008359}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LouroBC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuBSMJCCGDPW21, author = {Wei Lu and Carlos Bueno and Nicholas P. Schafer and Joshua Moller and Shikai Jin and Xun Chen and Mingchen Chen and Xinyu Gu and Aram Davtyan and Juan J. de Pablo and Peter G. Wolynes}, title = {OpenAWSEM with Open3SPN2: {A} fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008308}, doi = {10.1371/JOURNAL.PCBI.1008308}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuBSMJCCGDPW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuDMJBHLRE21, author = {Jonathan Lu and Bianca Dumitrascu and Ian C. McDowell and Brian Jo and Alejandro Barrera and Linda K. Hong and Sarah M. Leichter and Timothy E. Reddy and Barbara E. Engelhardt}, title = {Causal network inference from gene transcriptional time-series response to glucocorticoids}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008223}, doi = {10.1371/JOURNAL.PCBI.1008223}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuDMJBHLRE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuNLMDCXVLS21, author = {Fred S. Lu and Andr{\'{e}} T. Nguyen and Nicholas B. Link and Mathieu Molina and Jessica T. Davis and Matteo Chinazzi and Xinyue Xiong and Alessandro Vespignani and Marc Lipsitch and Mauricio Santillana}, title = {Estimating the cumulative incidence of {COVID-19} in the United States using influenza surveillance, virologic testing, and mortality data: Four complementary approaches}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008994}, doi = {10.1371/JOURNAL.PCBI.1008994}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuNLMDCXVLS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LubindaBHHM21, author = {Jailos Lubinda and Yaxin Bi and Busiku Hamainza and Ubydul Haque and Adrian J. Moore}, title = {Modelling of malaria risk, rates, and trends: {A} spatiotemporal approach for identifying and targeting sub-national areas of high and low burden}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008669}, doi = {10.1371/JOURNAL.PCBI.1008669}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/LubindaBHHM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuebeckVCH21, author = {E. Georg Luebeck and Thomas L. Vaughan and Kit Curtius and William D. Hazelton}, title = {Modeling historic incidence trends implies early field cancerization in esophageal squamous cell carcinoma}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008961}, doi = {10.1371/JOURNAL.PCBI.1008961}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuebeckVCH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuiNA21, author = {Lauren M. Lui and Torben N. Nielsen and Adam P. Arkin}, title = {A method for achieving complete microbial genomes and improving bins from metagenomics data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008972}, doi = {10.1371/JOURNAL.PCBI.1008972}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuiNA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LunzBRB21, author = {Davin Lunz and Gr{\'{e}}gory Batt and Jakob Ruess and J. Fr{\'{e}}d{\'{e}}ric Bonnans}, title = {Beyond the chemical master equation: Stochastic chemical kinetics coupled with auxiliary processes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009214}, doi = {10.1371/JOURNAL.PCBI.1009214}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LunzBRB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuoBRH21, author = {Yifu Luo and Chris S. Bresee and John W. Rudnicki and Mitra J. Z. Hartmann}, title = {Constraints on the deformation of the vibrissa within the follicle}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007887}, doi = {10.1371/JOURNAL.PCBI.1007887}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuoBRH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuppiNFGR21, author = {Andrea I. Luppi and Charlotte Coco Newton and Lynde Folsom and Elisa Galliano and Rafael Romero{-}Garcia}, title = {Ten simple rules for aspiring graduate students}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009276}, doi = {10.1371/JOURNAL.PCBI.1009276}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuppiNFGR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LuuS21, author = {Long Luu and Alan A. Stocker}, title = {Categorical judgments do not modify sensory representations in working memory}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008968}, doi = {10.1371/JOURNAL.PCBI.1008968}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LuuS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MaRMMSMTLCFJH21, author = {Siyuan Ma and Boyu Ren and Himel Mallick and Yo Sup Moon and Emma H. Schwager and Sagun Maharjan and Timothy L. Tickle and Yiren Lu and Rachel N. Carmody and Eric A. Franzosa and Lucas Janson and Curtis Huttenhower}, title = {A statistical model for describing and simulating microbial community profiles}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008913}, doi = {10.1371/JOURNAL.PCBI.1008913}, timestamp = {Tue, 05 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MaRMMSMTLCFJH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MadssenGSW21, author = {Torfinn S. Madssen and Guro F. Giske{\o}deg{\aa}rd and Age K. Smilde and Johan A. Westerhuis}, title = {Repeated measures {ASCA+} for analysis of longitudinal intervention studies with multivariate outcome data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009585}, doi = {10.1371/JOURNAL.PCBI.1009585}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MadssenGSW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MaesBC21, author = {Amadeus Maes and Mauricio Barahona and Claudia Clopath}, title = {Learning compositional sequences with multiple time scales through a hierarchical network of spiking neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008866}, doi = {10.1371/JOURNAL.PCBI.1008866}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MaesBC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MaguireGMKM21, author = {Jack B. Maguire and Daniele Grattarola and Vikram Khipple Mulligan and Eugene Klyshko and Hans Melo}, title = {XENet: Using a new graph convolution to accelerate the timeline for protein design on quantum computers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009037}, doi = {10.1371/JOURNAL.PCBI.1009037}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MaguireGMKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MajumdarGCHSGFP21, author = {Arunabha Majumdar and Claudia Giambartolomei and Na Cai and Tanushree Haldar and Tommer Schwarz and Michael J. Gandal and Jonathan Flint and Bogdan Pasaniuc}, title = {Leveraging eQTLs to identify individual-level tissue of interest for a complex trait}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008915}, doi = {10.1371/JOURNAL.PCBI.1008915}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MajumdarGCHSGFP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MajumderHZLB21, author = {Rupamanjari Majumder and Sayedeh Hussaini and Vladimir S. Zykov and Stefan Luther and Eberhard Bodenschatz}, title = {Pulsed low-energy stimulation initiates electric turbulence in cardiac tissue}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009476}, doi = {10.1371/JOURNAL.PCBI.1009476}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MajumderHZLB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MalikPEGHAS21, author = {Avni Malik and Paranjay Patel and Lubaina Ehsan and Shan Guleria and Thomas Hartka and Sodiq Adewole and Sana Syed}, title = {Ten simple rules for engaging with artificial intelligence in biomedicine}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008531}, doi = {10.1371/JOURNAL.PCBI.1008531}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MalikPEGHAS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MallickRMMZNTWR21, author = {Himel Mallick and Ali Rahnavard and Lauren J. McIver and Siyuan Ma and Yancong Zhang and Long H. Nguyen and Timothy L. Tickle and George Weingart and Boyu Ren and Emma H. Schwager and Suvo Chatterjee and Kelsey N. Thompson and Jeremy E. Wilkinson and Ayshwarya Subramanian and Yiren Lu and Levi Waldron and Joseph N. Paulson and Eric A. Franzosa and H{\'{e}}ctor Corrada Bravo and Curtis Huttenhower}, title = {Multivariable association discovery in population-scale meta-omics studies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009442}, doi = {10.1371/JOURNAL.PCBI.1009442}, timestamp = {Tue, 05 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MallickRMMZNTWR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MancinelliRD21, author = {Federico Mancinelli and Jonathan P. Roiser and Peter Dayan}, title = {Internality and the internalisation of failure: Evidence from a novel task}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009134}, doi = {10.1371/JOURNAL.PCBI.1009134}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MancinelliRD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MangoldWJBMNS21, author = {Kathryn E. Mangold and Wei Wang and Eric K. Johnson and Druv Bhagavan and Jonathan D. Moreno and Jeanne M. Nerbonne and Jonathan R. Silva}, title = {Identification of structures for ion channel kinetic models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008932}, doi = {10.1371/JOURNAL.PCBI.1008932}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MangoldWJBMNS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ManiscalcoOGCBL21, author = {Brian Maniscalco and Brian Odegaard and Piercesare Grimaldi and Seong Hah Cho and Michele A. Basso and Hakwan Lau and Megan A. K. Peters}, title = {Tuned inhibition in perceptual decision-making circuits can explain seemingly suboptimal confidence behavior}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008779}, doi = {10.1371/JOURNAL.PCBI.1008779}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ManiscalcoOGCBL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Mann21, author = {Richard P. Mann}, title = {Evolution of heterogeneous perceptual limits and indifference in competitive foraging}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008734}, doi = {10.1371/JOURNAL.PCBI.1008734}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Mann21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MarconBAERWBG21, author = {Yannick Marcon and Tom Bishop and Demetris Avraam and Xavier Escriba{-}Montagut and Patricia Ryser{-}Welch and Stuart Wheater and Paul R. Burton and Juan R. Gonz{\'{a}}lez}, title = {Orchestrating privacy-protected big data analyses of data from different resources with {R} and DataSHIELD}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008880}, doi = {10.1371/JOURNAL.PCBI.1008880}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MarconBAERWBG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MarinDAYHHLSNH21, author = {Wesley M. Marin and Ravi Dandekar and Danillo G. Augusto and Tasneem Yusufali and Bianca Heyn and Jan Hofmann and Vinzenz Lange and J{\"{u}}rgen Sauter and Paul J. Norman and Jill A. Hollenbach}, title = {High-throughput Interpretation of Killer-cell Immunoglobulin-like Receptor Short-read Sequencing Data with {PING}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008904}, doi = {10.1371/JOURNAL.PCBI.1008904}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MarinDAYHHLSNH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MarkkulaUWB21, author = {Gustav Markkula and Zeynep Uludag and Richard McGilchrist Wilkie and Jac Billington}, title = {Accumulation of continuously time-varying sensory evidence constrains neural and behavioral responses in human collision threat detection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009096}, doi = {10.1371/JOURNAL.PCBI.1009096}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MarkkulaUWB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MarquisJPB21, author = {Andrew D. Marquis and Filip Jezek and David J. Pinsky and Daniel A. Beard}, title = {Hypoxic pulmonary vasoconstriction as a regulator of alveolar-capillary oxygen flux: {A} computational model of ventilation-perfusion matching}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008861}, doi = {10.1371/JOURNAL.PCBI.1008861}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MarquisJPB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Martinez-Canada21, author = {Pablo Mart{\'{\i}}nez{-}Ca{\~{n}}ada and Torbj{\o}rn V. Ness and Gaute T. Einevoll and Tommaso Fellin and Stefano Panzeri}, title = {Computation of the electroencephalogram {(EEG)} from network models of point neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008893}, doi = {10.1371/JOURNAL.PCBI.1008893}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Martinez-Canada21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MartiniBHJG21, author = {Linda Martini and Sophie Brameyer and Elisabeth Hoyer and Kirsten Jung and Ulrich Gerland}, title = {Dynamics of chromosomal target search by a membrane-integrated one-component receptor}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008680}, doi = {10.1371/JOURNAL.PCBI.1008680}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MartiniBHJG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MasutaniAM21, author = {Bansho Masutani and Shin{-}ichi Arimura and Shinichi Morishita}, title = {Investigating the mitochondrial genomic landscape of Arabidopsis thaliana by long-read sequencing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008597}, doi = {10.1371/JOURNAL.PCBI.1008597}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MasutaniAM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MateuSM21, author = {Jos{\'{e}} Camacho Mateu and Matteo Sireci and Miguel A. Mu{\~{n}}oz}, title = {Phenotypic-dependent variability and the emergence of tolerance in bacterial populations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009417}, doi = {10.1371/JOURNAL.PCBI.1009417}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MateuSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MatteucciZMZ21, author = {Giulio Matteucci and Benedetta Zattera and Rosilari Bellacosa Marotti and Davide Zoccolan}, title = {Rats spontaneously perceive global motion direction of drifting plaids}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009415}, doi = {10.1371/JOURNAL.PCBI.1009415}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MatteucciZMZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MattoxB21, author = {Daniel E. Mattox and Chris Bailey{-}Kellogg}, title = {Comprehensive analysis of lectin-glycan interactions reveals determinants of lectin specificity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009470}, doi = {10.1371/JOURNAL.PCBI.1009470}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MattoxB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MaurasCDTFMOV21, author = {Simon Mauras and Vincent Cohen{-}Addad and Guillaume Duboc and Max Dupr{\'{e}} la Tour and Paolo Frasca and Claire Mathieu and Lulla Opatowski and Laurent Viennot}, title = {Mitigating {COVID-19} outbreaks in workplaces and schools by hybrid telecommuting}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009264}, doi = {10.1371/JOURNAL.PCBI.1009264}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MaurasCDTFMOV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MaxianPMD21, author = {Ondrej Maxian and Ra{\'{u}}l P. Pel{\'{a}}ez and Alex Mogilner and Aleksandar Donev}, title = {Simulations of dynamically cross-linked actin networks: Morphology, rheology, and hydrodynamic interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009240}, doi = {10.1371/JOURNAL.PCBI.1009240}, timestamp = {Thu, 26 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MaxianPMD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MazroueeLW21, author = {Sepideh Mazrouee and Susan J. Little and Joel O. Wertheim}, title = {Incorporating metadata in {HIV} transmission network reconstruction: {A} machine learning feasibility assessment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009336}, doi = {10.1371/JOURNAL.PCBI.1009336}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MazroueeLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MazzoliPMCGBTHM21, author = {Mattia Mazzoli and Emanuele Pepe and David Mateo and Ciro Cattuto and Laetitia Gauvin and Paolo Bajardi and Michele Tizzoni and Alberto Hernando and Sandro Meloni and Jos{\'{e}} J. Ramasco}, title = {Interplay between mobility, multi-seeding and lockdowns shapes {COVID-19} local impact}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009326}, doi = {10.1371/JOURNAL.PCBI.1009326}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MazzoliPMCGBTHM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/McAvoyRH21, author = {Alex McAvoy and Andrew Rao and Christoph Hauert}, title = {Intriguing effects of selection intensity on the evolution of prosocial behaviors}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009611}, doi = {10.1371/JOURNAL.PCBI.1009611}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/McAvoyRH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/McCallCWBTCHSGG21, author = {Matthew N. McCall and Chin{-}Yi Chu and Lu Wang and Lauren Benoodt and Juilee Thakar and Anthony Corbett and Jeanne Holden{-}Wiltse and Christopher Slaunwhite and Alex Grier and Steven R. Gill and Ann R. Falsey and David J. Topham and Mary T. Caserta and Edward E. Walsh and Xing Qiu and Thomas J. Mariani}, title = {A systems genomics approach uncovers molecular associates of {RSV} severity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009617}, doi = {10.1371/JOURNAL.PCBI.1009617}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/McCallCWBTCHSGG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MederRMMKDSH21, author = {David Meder and Finn Rabe and Tobias Morville and Kristoffer H. Madsen and Magnus T. Koudahl and Raymond J. Dolan and Hartwig R. Siebner and Oliver J. Hulme}, title = {Ergodicity-breaking reveals time optimal decision making in humans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009217}, doi = {10.1371/JOURNAL.PCBI.1009217}, timestamp = {Fri, 12 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MederRMMKDSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MedvedevP21, author = {Paul Medvedev and Mihai Pop}, title = {What do Eulerian and Hamiltonian cycles have to do with genome assembly?}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008928}, doi = {10.1371/JOURNAL.PCBI.1008928}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MedvedevP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Meerstein-Kessel21, author = {Lisette Meerstein{-}Kessel and Jeron Venhuizen and Daniel Garza and Nicolas Pr{\"{o}}llochs and Emma J. Vos and Joshua M. Obiero and Philip L. Felgner and Robert W. Sauerwein and Marynthe Peters and Annie S. P. Yang and Martijn A. Huynen}, title = {Novel insights from the Plasmodium falciparum sporozoite-specific proteome by probabilistic integration of 26 studies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008067}, doi = {10.1371/JOURNAL.PCBI.1008067}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Meerstein-Kessel21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MendoncaJPBWF21, author = {Tania Mendonca and Ana A. Jones and Jose M. Pozo and Sarah Baxendale and Tanya T. Whitfield and Alejandro F. Frangi}, title = {Origami: Single-cell 3D shape dynamics oriented along the apico-basal axis of folding epithelia from fluorescence microscopy data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009063}, doi = {10.1371/JOURNAL.PCBI.1009063}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MendoncaJPBWF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MenghiKP21, author = {Nicholas Menghi and Kemal Kacar and Will D. Penny}, title = {Multitask learning over shared subspaces}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009092}, doi = {10.1371/JOURNAL.PCBI.1009092}, timestamp = {Tue, 19 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MenghiKP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MenichelliGMLLL21, author = {Christophe Menichelli and Vincent Guitard and Rafael M. Martins and Sophie L{\`{e}}bre and Jose{-}Juan Lopez{-}Rubio and Charles{-}Henri Lecellier and Laurent Br{\'{e}}h{\'{e}}lin}, title = {Identification of long regulatory elements in the genome of Plasmodium falciparum and other eukaryotes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008909}, doi = {10.1371/JOURNAL.PCBI.1008909}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MenichelliGMLLL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MenkirCPSJCSSB21, author = {Tigist F. Menkir and Horace Cox and Canelle Poirier and Melanie Saul and Sharon Jones{-}Weekes and Collette Clementson and Pablo M. De Salazar and Mauricio Santillana and Caroline O. Buckee}, title = {A nowcasting framework for correcting for reporting delays in malaria surveillance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009570}, doi = {10.1371/JOURNAL.PCBI.1009570}, timestamp = {Thu, 09 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MenkirCPSJCSSB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MenschMTV21, author = {Arthur Mensch and Julien Mairal and Bertrand Thirion and Ga{\"{e}}l Varoquaux}, title = {Extracting representations of cognition across neuroimaging studies improves brain decoding}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008795}, doi = {10.1371/JOURNAL.PCBI.1008795}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MenschMTV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MergenthalerHPL21, author = {Philipp Mergenthaler and Santosh Hariharan and James M. Pemberton and Corey Lourenco and Linda Z. Penn and David W. Andrews}, title = {Rapid 3D phenotypic analysis of neurons and organoids using data-driven cell segmentation-free machine learning}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008630}, doi = {10.1371/JOURNAL.PCBI.1008630}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MergenthalerHPL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MerleauPGES21, author = {Nono S. C. Merleau and Sophie Penisson and Philip J. Gerrish and Santiago F. Elena and Matteo Smerlak}, title = {Why are viral genomes so fragile? The bottleneck hypothesis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009128}, doi = {10.1371/JOURNAL.PCBI.1009128}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MerleauPGES21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MerlinASODMSV21, author = {Bruno Merlin and Jorianne Thyeska Castro Alves and Pablo Henrique Caracciolo Gomes de S{\'{a}} and M{\^{o}}nica Silva de Oliveira and Larissa Maranh{\~{a}}o Dias and Gislenne da Silva Moia and Vict{\'{o}}ria Cardoso dos Santos and Adonney Allan de Oliveira Veras}, title = {{CODON} - Software to manual curation of prokaryotic genomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008797}, doi = {10.1371/JOURNAL.PCBI.1008797}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MerlinASODMSV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MessanYMNSY21, author = {Marisabel Rodriguez Messan and Osman N. Yogurt{\c{c}}u and Joseph R. McGill and Ujwani Nukala and Zuben E. Sauna and Hong Yang}, title = {Mathematical model of a personalized neoantigen cancer vaccine and the human immune system}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009318}, doi = {10.1371/JOURNAL.PCBI.1009318}, timestamp = {Tue, 28 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MessanYMNSY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MieleM21, author = {Leonardo Miele and Silvia De Monte}, title = {Aggregative cycles evolve as a solution to conflicts in social investment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008617}, doi = {10.1371/JOURNAL.PCBI.1008617}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MieleM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MigdalRFHH21, author = {Maciej Migdal and Dan Fu Ruan and William F. Forrest and Amir Horowitz and Christian Hammer}, title = {MiDAS - Meaningful Immunogenetic Data at Scale}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009131}, doi = {10.1371/JOURNAL.PCBI.1009131}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MigdalRFHH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MihelicSHWJD21, author = {Samuel A. Mihelic and William A. Sikora and Ahmed M. Hassan and Michael R. Williamson and Theresa A. Jones and Andrew K. Dunn}, title = {Segmentation-Less, Automated, Vascular Vectorization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009451}, doi = {10.1371/JOURNAL.PCBI.1009451}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MihelicSHWJD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MikhaelLG21, author = {John G. Mikhael and Lucy Lai and Samuel J. Gershman}, title = {Rational inattention and tonic dopamine}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008659}, doi = {10.1371/JOURNAL.PCBI.1008659}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MikhaelLG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MikolajewiczSKK21, author = {Nicholas Mikolajewicz and Delaney Smith and Svetlana V. Komarova and Anmar Khadra}, title = {High-affinity {P2Y2} and low-affinity {P2X7} receptor interaction modulates ATP-mediated calcium signaling in murine osteoblasts}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008872}, doi = {10.1371/JOURNAL.PCBI.1008872}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MikolajewiczSKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MiliouXRZRGPV21, author = {Ioanna Miliou and Xinyue Xiong and Salvatore Rinzivillo and Qian Zhang and Giulio Rossetti and Fosca Giannotti and Dino Pedreschi and Alessandro Vespignani}, title = {Predicting seasonal influenza using supermarket retail records}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009087}, doi = {10.1371/JOURNAL.PCBI.1009087}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MiliouXRZRGPV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MillerMH21, author = {Kai J. Miller and Klaus{-}Robert M{\"{u}}ller and Dora Hermes}, title = {Basis profile curve identification to understand electrical stimulation effects in human brain networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008710}, doi = {10.1371/JOURNAL.PCBI.1008710}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MillerMH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MinCZW21, author = {Wenwen Min and Tsung{-}Hui Chang and Shihua Zhang and Xiang Wan}, title = {{TSCCA:} {A} tensor sparse {CCA} method for detecting microRNA-gene patterns from multiple cancers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009044}, doi = {10.1371/JOURNAL.PCBI.1009044}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MinCZW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MingHSS21, author = {Chen Ming and Stephanie Haro and Andrea Megela Simmons and James A. Simmons}, title = {A comprehensive computational model of animal biosonar signal processing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008677}, doi = {10.1371/JOURNAL.PCBI.1008677}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MingHSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MioduszewskiC21, author = {Lukasz Mioduszewski and Marek Cieplak}, title = {Viscoelastic properties of wheat gluten in a molecular dynamics study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008840}, doi = {10.1371/JOURNAL.PCBI.1008840}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MioduszewskiC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MironovDGKP21, author = {Andrey A. Mironov and Stepan Denisov and Alexander Gre{\ss} and Olga V. Kalinina and Dmitri D. Pervouchine}, title = {An extended catalogue of tandem alternative splice sites in human tissue transcriptomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008329}, doi = {10.1371/JOURNAL.PCBI.1008329}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MironovDGKP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Mirzapour-Shafiyi21, author = {Fatemeh Mirzapour{-}Shafiyi and Yukinori Kametani and Takao Hikita and Yosuke Hasegawa and Masanori Nakayama}, title = {Numerical evaluation reveals the effect of branching morphology on vessel transport properties during angiogenesis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008398}, doi = {10.1371/JOURNAL.PCBI.1008398}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Mirzapour-Shafiyi21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MisraSVLJP21, author = {Joyneel Misra and Sriniwas Govinda Surampudi and Manasij Venkatesh and Chirag Limbachia and Joseph F. J{\'{a}}J{\'{a}} and Luiz Pessoa}, title = {Learning brain dynamics for decoding and predicting individual differences}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008943}, doi = {10.1371/JOURNAL.PCBI.1008943}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MisraSVLJP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MitchellVGB21, author = {Spencer J. Mitchell and Deeptak Verma and Karl E. Griswold and Chris Bailey{-}Kellogg}, title = {Building blocks and blueprints for bacterial autolysins}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008889}, doi = {10.1371/JOURNAL.PCBI.1008889}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MitchellVGB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MitteroeckerS21, author = {Philipp Mitteroecker and Ekaterina Stansfield}, title = {A model of developmental canalization, applied to human cranial form}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008381}, doi = {10.1371/JOURNAL.PCBI.1008381}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MitteroeckerS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MiuraLKAW21, author = {Fuminari Miura and Ka Yin Leung and Don Klinkenberg and Kylie E. C. Ainslie and Jacco Wallinga}, title = {Optimal vaccine allocation for {COVID-19} in the Netherlands: {A} data-driven prioritization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009697}, doi = {10.1371/JOURNAL.PCBI.1009697}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MiuraLKAW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ModiDS21, author = {Saurabh Modi and Supravat Dey and Abhyudai Singh}, title = {Noise suppression in stochastic genetic circuits using {PID} controllers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009249}, doi = {10.1371/JOURNAL.PCBI.1009249}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ModiDS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MohamedKIAMIA21, author = {Sofia B. Mohamed and Sumaya Kambal and Sabah A. E. Ibrahim and Esra Abdalwhab and Abdalla Munir and Arwa Ibrahim and Qurashi Mohamed Ali}, title = {Bioinformatics in Sudan: Status and challenges case study: The National University-Sudan}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009462}, doi = {10.1371/JOURNAL.PCBI.1009462}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MohamedKIAMIA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MoldwinKS21, author = {Toviah Moldwin and Menachem Kalmenson and Idan Segev}, title = {The gradient clusteron: {A} model neuron that learns to solve classification tasks via dendritic nonlinearities, structural plasticity, and gradient descent}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009015}, doi = {10.1371/JOURNAL.PCBI.1009015}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MoldwinKS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MollerGMB21, author = {Moritz M{\"{o}}ller and Jan Grohn and Sanjay G. Manohar and Rafal Bogacz}, title = {An association between prediction errors and risk-seeking: Theory and behavioral evidence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009213}, doi = {10.1371/JOURNAL.PCBI.1009213}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MollerGMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MooreHDTK21, author = {Sam Moore and Edward M. Hill and Louise Dyson and Michael J. Tildesley and Matt J. Keeling}, title = {Modelling optimal vaccination strategy for SARS-CoV-2 in the {UK}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008849}, doi = {10.1371/JOURNAL.PCBI.1008849}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MooreHDTK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MooreLCCAFGGGMM21, author = {Benjamin L. Moore and Patricia Carvajal L{\'{o}}pez and Paballo Abel Chauke and Marco Cristancho and Victoria Dominguez Del Angel and Selene L. Fernandez{-}Valverde and Amel Ghouila and Piraveen Gopalasingam and Fatma Zahra Guerfali and Alice Matimba and Sarah L. Morgan and Guilherme Oliveira and Verena Ras and Alejandro Reyes and Javier De Las Rivas and Nicola J. Mulder}, title = {Ten simple rules for organizing a bioinformatics training course in low- and middle-income countries}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009218}, doi = {10.1371/JOURNAL.PCBI.1009218}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MooreLCCAFGGGMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MoranKD21, author = {Rani Moran and Mehdi Keramati and Raymond J. Dolan}, title = {Model based planners reflect on their model-free propensities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008552}, doi = {10.1371/JOURNAL.PCBI.1008552}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MoranKD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MorganW21, author = {Whitney Rachel Morgan and Erik Scott Wright}, title = {Ten simple rules for hitting a home run with your elevator pitch}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008756}, doi = {10.1371/JOURNAL.PCBI.1008756}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MorganW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MorgensternHSTP21, author = {Yaniv Morgenstern and Frieder Hartmann and Filipp Schmidt and Henning Tiedemann and Eugen Prokott and Guido Maiello and Roland W. Fleming}, title = {An image-computable model of human visual shape similarity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008981}, doi = {10.1371/JOURNAL.PCBI.1008981}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MorgensternHSTP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MoritaKOT21, author = {Takashi Morita and Hiroki Koda and Kazuo Okanoya and Ryosuke Tachibana}, title = {Measuring context dependency in birdsong using artificial neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009707}, doi = {10.1371/JOURNAL.PCBI.1009707}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MoritaKOT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MorrisonRP21, author = {Muir Morrison and Manuel Razo{-}Mejia and Rob Phillips}, title = {Reconciling kinetic and thermodynamic models of bacterial transcription}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008572}, doi = {10.1371/JOURNAL.PCBI.1008572}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MorrisonRP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MosesHCAGHLPSTF21, author = {Melanie E. Moses and Steven A. Hofmeyr and Judy L. Cannon and Akil Andrews and Rebekah Gridley and Monica Hinga and Kirtus G. Leyba and Abigail Pribisova and Vanessa Surjadidjaja and Humayra Tasnim and Stephanie Forrest}, title = {Spatially distributed infection increases viral load in a computational model of SARS-CoV-2 lung infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009735}, doi = {10.1371/JOURNAL.PCBI.1009735}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MosesHCAGHLPSTF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MoshkforoushBMM21, author = {Arash Moshkforoush and Lakshmini Balachandar and Carolina Moncion and Karla A. Montejo and Jorge J. Riera}, title = {Unraveling ChR2-driven stochastic Ca2+ dynamics in astrocytes: {A} call for new interventional paradigms}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008648}, doi = {10.1371/JOURNAL.PCBI.1008648}, timestamp = {Sun, 05 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MoshkforoushBMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MottesVOC21, author = {Francesco Mottes and Chiara Villa and Matteo Osella and Michele Caselle}, title = {The impact of whole genome duplications on the human gene regulatory networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009638}, doi = {10.1371/JOURNAL.PCBI.1009638}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MottesVOC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MukherjeeL21, author = {Mrinmoy Mukherjee and Herbert Levine}, title = {Cluster size distribution of cells disseminating from a primary tumor}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009011}, doi = {10.1371/JOURNAL.PCBI.1009011}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MukherjeeL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Muller-Komorowska21, author = {Daniel M{\"{u}}ller{-}Komorowska and Ana Parabucki and Gal Elyasaf and Yonatan Katz and Heinz Beck and Ilan Lampl}, title = {A novel theoretical framework for simultaneous measurement of excitatory and inhibitory conductances}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009725}, doi = {10.1371/JOURNAL.PCBI.1009725}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Muller-Komorowska21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MuraseB21, author = {Yohsuke Murase and Seung Ki Baek}, title = {Friendly-rivalry solution to the iterated n-person public-goods game}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008217}, doi = {10.1371/JOURNAL.PCBI.1008217}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/MuraseB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/MusselmanCGP21, author = {Eric D. Musselman and Jake E. Cariello and Warren M. Grill and Nicole A. Pelot}, title = {{ASCENT} (Automated Simulations to Characterize Electrical Nerve Thresholds): {A} pipeline for sample-specific computational modeling of electrical stimulation of peripheral nerves}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009285}, doi = {10.1371/JOURNAL.PCBI.1009285}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/MusselmanCGP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Naegle21, author = {Kristen M. Naegle}, title = {Ten simple rules for effective presentation slides}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009554}, doi = {10.1371/JOURNAL.PCBI.1009554}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Naegle21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NagamoriLLC21, author = {Akira Nagamori and Christopher M. Laine and Gerald E. Loeb and Francisco J. Valero Cuevas}, title = {Force variability is mostly not motor noise: Theoretical implications for motor control}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008707}, doi = {10.1371/JOURNAL.PCBI.1008707}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/NagamoriLLC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NandaG21, author = {Piyush Nanda and Amit Ghosh}, title = {Genome Scale-Differential Flux Analysis reveals deregulation of lung cell metabolism on SARS-CoV-2 infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008860}, doi = {10.1371/JOURNAL.PCBI.1008860}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NandaG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NandeASLH21, author = {Anjalika Nande and Ben Adlam and Justin Sheen and Michael Z. Levy and Alison L. Hill}, title = {Dynamics of {COVID-19} under social distancing measures are driven by transmission network structure}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008684}, doi = {10.1371/JOURNAL.PCBI.1008684}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NandeASLH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NardiniSFHB21, author = {John T. Nardini and Bernadette J. Stolz and Kevin B. Flores and Heather A. Harrington and Helen M. Byrne}, title = {Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009094}, doi = {10.1371/JOURNAL.PCBI.1009094}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NardiniSFHB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NaumovPPKRKGTSG21, author = {Vladimir Naumov and Evgeny Putin and Stefan Pushkov and Ekaterina Kozlova and Konstantin Romantsov and Alexander A. Kalashnikov and Fedor Galkin and Nina Tihonova and Anastasia Shneyderman and Egor Galkin and Arsenii Zinkevich and Stephanie M. Cope and Ramanathan Sethuraman and Tudor I. Oprea and Alexander T. Pearson and Savas Tay and Nishant Agrawal and Alexey Dubovenko and Quentin Vanhaelen and Ivan Ozerov and Alex Aliper and Evgeny Izumchenko and Alex Zhavoronkov}, title = {COVIDomic: {A} multi-modal cloud-based platform for identification of risk factors associated with {COVID-19} severity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009183}, doi = {10.1371/JOURNAL.PCBI.1009183}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NaumovPPKRKGTSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NayeemBSHS21, author = {Rashida Nayeem and Salah Bazzi and Mohsen Sadeghi and Neville Hogan and Dagmar Sternad}, title = {Preparing to move: Setting initial conditions to simplify interactions with complex objects}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009597}, doi = {10.1371/JOURNAL.PCBI.1009597}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NayeemBSHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NeilanMGACK21, author = {Rachael Miller Neilan and Gabrielle Majetic and Mauricio Gil{-}Silva and Anisha P. Adke and Yarimar Carrasquillo and Benedict J. Kolber}, title = {Agent-based modeling of the central amygdala and pain using cell-type specific physiological parameters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009097}, doi = {10.1371/JOURNAL.PCBI.1009097}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NeilanMGACK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NessS21, author = {Natalie Ness and Simon R. Schultz}, title = {A computational grid-to-place-cell transformation model indicates a synaptic driver of place cell impairment in early-stage Alzheimer's Disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009115}, doi = {10.1371/JOURNAL.PCBI.1009115}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NessS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NevLJBBG21, author = {Olga A. Nev and Richard J. Lindsay and Alys Jepson and Lisa Butt and Robert E. Beardmore and Ivana Gudelj}, title = {Predicting microbial growth dynamics in response to nutrient availability}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008817}, doi = {10.1371/JOURNAL.PCBI.1008817}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NevLJBBG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NevilleDGPM21, author = {Vikki Neville and Peter Dayan and Iain D. Gilchrist and Elizabeth S. Paul and Michael Mendl}, title = {Dissecting the links between reward and loss, decision-making, and self-reported affect using a computational approach}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008555}, doi = {10.1371/JOURNAL.PCBI.1008555}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NevilleDGPM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NguyenCC21, author = {Son Hoang Nguyen and Minh Duc Cao and Lachlan J. M. Coin}, title = {Real-time resolution of short-read assembly graph using {ONT} long reads}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008586}, doi = {10.1371/JOURNAL.PCBI.1008586}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/NguyenCC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NguyenCDMBK21, author = {Phuc Nguyen and Sylvia Chien and Jin Dai and Raymond J. Monnat Jr. and Pamela S. Becker and Hao Yuan Kueh}, title = {Unsupervised discovery of dynamic cell phenotypic states from transmitted light movies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009626}, doi = {10.1371/JOURNAL.PCBI.1009626}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NguyenCDMBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NiemannLGS21, author = {Matthias Niemann and Nils Lachmann and Kirsten Geneugelijk and Eric Spierings}, title = {Computational Eurotransplant kidney allocation simulations demonstrate the feasibility and benefit of T-cell epitope matching}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009248}, doi = {10.1371/JOURNAL.PCBI.1009248}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NiemannLGS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NiemelaK21, author = {Akseli Niemel{\"{a}} and Artturi Koivuniemi}, title = {Positive allosteric modulators of lecithin: Cholesterol acyltransferase adjust the orientation of the membrane-binding domain and alter its spatial free energy profile}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008426}, doi = {10.1371/JOURNAL.PCBI.1008426}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NiemelaK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NiinaMT21, author = {Toru Niina and Yasuhiro Matsunaga and Shoji Takada}, title = {Rigid-body fitting to atomic force microscopy images for inferring probe shape and biomolecular structure}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009215}, doi = {10.1371/JOURNAL.PCBI.1009215}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/NiinaMT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NishidaBMKN21, author = {Satoshi Nishida and Antoine Blanc and Naoya Maeda and Masataka Kado and Shinji Nishimoto}, title = {Behavioral correlates of cortical semantic representations modeled by word vectors}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009138}, doi = {10.1371/JOURNAL.PCBI.1009138}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NishidaBMKN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NishiuraK21, author = {Naoto Nishiura and Kunihiko Kaneko}, title = {Evolution of phenotypic fluctuation under host-parasite interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008694}, doi = {10.1371/JOURNAL.PCBI.1008694}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NishiuraK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NivloueiSCTSS21, author = {Sahar Jafari Nivlouei and Madjid Soltani and Jo{\~{a}}o Carvalho and Rui Travasso and Mohammad Reza Salimpour and Ebrahim Shirani}, title = {Multiscale modeling of tumor growth and angiogenesis: Evaluation of tumor-targeted therapy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009081}, doi = {10.1371/JOURNAL.PCBI.1009081}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NivloueiSCTSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NoaKAZH21, author = {Amra Noa and Hui{-}Shun Kuan and Vera Aschmann and Vasily Zaburdaev and Lennart Hilbert}, title = {The hierarchical packing of euchromatin domains can be described as multiplicative cascades}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008974}, doi = {10.1371/JOURNAL.PCBI.1008974}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NoaKAZH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NordquistECSGC21, author = {Erik B. Nordquist and Charles A. English and Eugenia M. Clerico and Woody Sherman and Lila M. Gierasch and Jianhan Chen}, title = {Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009567}, doi = {10.1371/JOURNAL.PCBI.1009567}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NordquistECSGC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NoroyM21, author = {Christophe Noroy and Damien F. Meyer}, title = {The super repertoire of type {IV} effectors in the pangenome of Ehrlichia spp. provides insights into host-specificity and pathogenesis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008788}, doi = {10.1371/JOURNAL.PCBI.1008788}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NoroyM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NorrisLFS21, author = {Noele Norris and Naomi M. Levine and Vicente I. Fernandez and Roman Stocker}, title = {Mechanistic model of nutrient uptake explains dichotomy between marine oligotrophic and copiotrophic bacteria}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009023}, doi = {10.1371/JOURNAL.PCBI.1009023}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/NorrisLFS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NotermansTKKI21, author = {Thomas Notermans and Petri Tanska and Rami K. Korhonen and Hanifeh Khayyeri and Hanna Isaksson}, title = {A numerical framework for mechano-regulated tendon healing - Simulation of early regeneration of the Achilles tendon}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008636}, doi = {10.1371/JOURNAL.PCBI.1008636}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NotermansTKKI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Novoa-del-ToroM21, author = {Elva Mar{\'{\i}}a Novoa{-}del{-}Toro and Efr{\'{e}}n Mezura{-}Montes and Matthieu Vignes and Morgane T{\'{e}}r{\'{e}}zol and Fr{\'{e}}d{\'{e}}rique Magdinier and Laurent Tichit and Ana{\"{\i}}s Baudot}, title = {A multi-objective genetic algorithm to find active modules in multiplex biological networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009263}, doi = {10.1371/JOURNAL.PCBI.1009263}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Novoa-del-ToroM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NystromM21, author = {Spencer L. Nystrom and Daniel J. McKay}, title = {Memes: {A} motif analysis environment in {R} using tools from the {MEME} Suite}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008991}, doi = {10.1371/JOURNAL.PCBI.1008991}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NystromM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/OHareBWMMTSK21, author = {Anthony O'Hare and Daniel Balaz and David M. Wright and Carl McCormick and Stanley McDowell and Hannah Trewby and Robin A. Skuce and Rowland R. Kao}, title = {A new phylodynamic model of Mycobacterium bovis transmission in a multi-host system uncovers the role of the unobserved reservoir}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009005}, doi = {10.1371/JOURNAL.PCBI.1009005}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/OHareBWMMTSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/OliveiraRFRD21, author = {Alexandre Oliveira and Joana Rodrigues and Eug{\'{e}}nio Campos Ferreira and L{\'{\i}}gia R. Rodrigues and Oscar D{\'{\i}}as}, title = {A kinetic model of the central carbon metabolism for acrylic acid production in Escherichia coli}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008704}, doi = {10.1371/JOURNAL.PCBI.1008704}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/OliveiraRFRD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/OmarZSMTW21, author = {Sara Ibrahim Omar and Meng Zhao and Rohith Vedhthaanth Sekar and Sahar Arbabi Moghadam and Jack A. Tuszynski and Michael T. Woodside}, title = {Modeling the structure of the frameshift-stimulatory pseudoknot in SARS-CoV-2 reveals multiple possible conformers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008603}, doi = {10.1371/JOURNAL.PCBI.1008603}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/OmarZSMTW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/OrozcoAS21, author = {Simon P. Orozco and Scott T. Albert and Reza Shadmehr}, title = {Adaptive control of movement deceleration during saccades}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009176}, doi = {10.1371/JOURNAL.PCBI.1009176}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/OrozcoAS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/OsterbergDMNHC21, author = {Linnea {\"{O}}sterberg and Iv{\'{a}}n Domenzain and Julia M{\"{u}}nch and Jens Nielsen and Stefan Hohmann and Marija Cvijovic}, title = {A novel yeast hybrid modeling framework integrating Boolean and enzyme-constrained networks enables exploration of the interplay between signaling and metabolism}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008891}, doi = {10.1371/JOURNAL.PCBI.1008891}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/OsterbergDMNHC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PallaPBMMC21, author = {Gergely Palla and P{\'{e}}ter Pollner and Judit B{\"{o}}rcs{\"{o}}k and Andr{\'{a}}s Major and B{\'{e}}la Moln{\'{a}}r and Istv{\'{a}}n Csabai}, title = {Hierarchy and control of ageing-related methylation networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009327}, doi = {10.1371/JOURNAL.PCBI.1009327}, timestamp = {Tue, 28 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PallaPBMMC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PaluojaTABVSKP21, author = {Priit Paluoja and Hindrek Teder and Amin Ardeshirdavani and Baran Bayindir and Joris Robert Vermeesch and Andres Salumets and Kaarel Krjutskov and Priit Palta}, title = {Systematic evaluation of {NIPT} aneuploidy detection software tools with clinically validated {NIPT} samples}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009684}, doi = {10.1371/JOURNAL.PCBI.1009684}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PaluojaTABVSKP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PanCWMMTL21, author = {Jichao Pan and Yan Cai and Liang Wang and Akiko Maehara and Gary S. Mintz and Dalin Tang and Zhiyong Li}, title = {A prediction tool for plaque progression based on patient-specific multi-physical modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008344}, doi = {10.1371/JOURNAL.PCBI.1008344}, timestamp = {Fri, 24 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PanCWMMTL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PanCWMMTL21a, author = {Jichao Pan and Yan Cai and Liang Wang and Akiko Maehara and Gary S. Mintz and Dalin Tang and Zhiyong Li}, title = {Correction: {A} prediction tool for plaque progression based on patient-specific multi-physical modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009709}, doi = {10.1371/JOURNAL.PCBI.1009709}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PanCWMMTL21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PanGCC21, author = {Michael Pan and Peter J. Gawthrop and Joseph Cursons and Edmund J. Crampin}, title = {Modular assembly of dynamic models in systems biology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009513}, doi = {10.1371/JOURNAL.PCBI.1009513}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PanGCC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PanK21, author = {Xingjie Pan and Tanja Kortemme}, title = {De novo protein fold families expand the designable ligand binding site space}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009620}, doi = {10.1371/JOURNAL.PCBI.1009620}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PanK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PanaggioAYBS21, author = {Mark J. Panaggio and Daniel M. Abrams and Fan Yang and Tanvi Banerjee and Nirmish Shah}, title = {Can subjective pain be inferred from objective physiological data? Evidence from patients with sickle cell disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008542}, doi = {10.1371/JOURNAL.PCBI.1008542}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PanaggioAYBS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PandeyXQS21, author = {Vikas Pandey and Lai{-}Hua Xie and Zhilin Qu and Zhen Song}, title = {Mitochondrial depolarization promotes calcium alternans: Mechanistic insights from a ventricular myocyte model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008624}, doi = {10.1371/JOURNAL.PCBI.1008624}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PandeyXQS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PanizzaVC21, author = {Folco Panizza and Alexander Vostroknutov and Giorgio Coricelli}, title = {How conformity can lead to polarised social behaviour}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009530}, doi = {10.1371/JOURNAL.PCBI.1009530}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PanizzaVC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PannunziN21, author = {Mario Pannunzi and Thomas Nowotny}, title = {Non-synaptic interactions between olfactory receptor neurons, a possible key feature of odor processing in flies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009583}, doi = {10.1371/JOURNAL.PCBI.1009583}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PannunziN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Parag21, author = {Kris V. Parag}, title = {Improved estimation of time-varying reproduction numbers at low case incidence and between epidemic waves}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009347}, doi = {10.1371/JOURNAL.PCBI.1009347}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Parag21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ParidaBH21, author = {Satyabrata Parida and Hari M. Bharadwaj and Michael G. Heinz}, title = {Spectrally specific temporal analyses of spike-train responses to complex sounds: {A} unifying framework}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008155}, doi = {10.1371/JOURNAL.PCBI.1008155}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ParidaBH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ParisiBHAKN21, author = {Andrea Parisi and Samuel P. C. Brand and Joe Hilton and Rabia Aziza and Matt J. Keeling and D. James Nokes}, title = {Spatially resolved simulations of the spread of {COVID-19} in three European countries}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009090}, doi = {10.1371/JOURNAL.PCBI.1009090}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ParisiBHAKN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ParizFVM21, author = {Aref Pariz and Ingo Fischer and Alireza Valizadeh and Claudio R. Mirasso}, title = {Transmission delays and frequency detuning can regulate information flow between brain regions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008129}, doi = {10.1371/JOURNAL.PCBI.1008129}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ParizFVM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ParkBHAKCW21, author = {Sung{-}Ho Park and Justin Baik and Jiso Hong and Hanna Antila and Benjamin Kurland and Shinjae Chung and Franz Weber}, title = {A probabilistic model for the ultradian timing of {REM} sleep in mice}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009316}, doi = {10.1371/JOURNAL.PCBI.1009316}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ParkBHAKCW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ParkerBB21, author = {Micaela S. Parker and Arlyn E. Burgess and Philip E. Bourne}, title = {Ten simple rules for starting (and sustaining) an academic data science initiative}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008628}, doi = {10.1371/JOURNAL.PCBI.1008628}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ParkerBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ParkerKPC21, author = {Jessica R. Parker and Alexander N. Klishko and Boris I. Prilutsky and Gennady S. Cymbalyuk}, title = {Asymmetric and transient properties of reciprocal activity of antagonists during the paw-shake response in the cat}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009677}, doi = {10.1371/JOURNAL.PCBI.1009677}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ParkerKPC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Patumcharoenpol21, author = {Preecha Patumcharoenpol and Massalin Nakphaichit and Gianni Panagiotou and Anchalee Senavonge and Narissara Suratannon and Wanwipa Vongsangnak}, title = {MetGEMs Toolbox: Metagenome-scale models as integrative toolbox for uncovering metabolic functions and routes of human gut microbiome}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008487}, doi = {10.1371/JOURNAL.PCBI.1008487}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Patumcharoenpol21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PaulMRSW21, author = {Avishek Paul and Helen McLendon and Veronica Rally and Jon T. Sakata and Sarah C. Woolley}, title = {Behavioral discrimination and time-series phenotyping of birdsong performance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008820}, doi = {10.1371/JOURNAL.PCBI.1008820}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PaulMRSW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PavlovaPMB21, author = {Yekaterina S. Pavlova and David P{\'{a}}ez{-}Espino and Andrew Yu. Morozov and Ilya S. Belalov}, title = {Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008841}, doi = {10.1371/JOURNAL.PCBI.1008841}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PavlovaPMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PedersenIAMKGPF21, author = {Mads L. Pedersen and Maria Ironside and Ken{-}ichi Amemori and Callie L. McGrath and Min S. Kang and Ann M. Graybiel and Diego A. Pizzagalli and Michael J. Frank}, title = {Computational phenotyping of brain-behavior dynamics underlying approach-avoidance conflict in major depressive disorder}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008955}, doi = {10.1371/JOURNAL.PCBI.1008955}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PedersenIAMKGPF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PenevASPW21, author = {Petar I. Penev and Claudia Alvarez{-}Carre{\~{n}}o and Eric Smith and Anton S. Petrov and Loren Dean Williams}, title = {TwinCons: Conservation score for uncovering deep sequence similarity and divergence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009541}, doi = {10.1371/JOURNAL.PCBI.1009541}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PenevASPW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Perez-CerveraH21, author = {Alberto P{\'{e}}rez{-}Cervera and Jaroslav Hlinka}, title = {Perturbations both trigger and delay seizures due to generic properties of slow-fast relaxation oscillators}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008521}, doi = {10.1371/JOURNAL.PCBI.1008521}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Perez-CerveraH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Perkins21, author = {Melinda Liu Perkins}, title = {Implications of diffusion and time-varying morphogen gradients for the dynamic positioning and precision of bistable gene expression boundaries}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008589}, doi = {10.1371/JOURNAL.PCBI.1008589}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Perkins21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PerlPIDBMPAIKDL21, author = {Yonatan Sanz Perl and Carla Pallavicini and Ignacio Perez Ipi{\~{n}}a and Athena Demertzi and Vincent Bonhomme and Charlotte Martial and Rajanikant Panda and Jitka Annen and Agust{\'{\i}}n Ib{\'{a}}{\~{n}}ez and Morten L. Kringelbach and Gustavo Deco and Helmut Laufs and Jacobo D. Sitt and Steven Laureys and Enzo Tagliazucchi}, title = {Perturbations in dynamical models of whole-brain activity dissociate between the level and stability of consciousness}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009139}, doi = {10.1371/JOURNAL.PCBI.1009139}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PerlPIDBMPAIKDL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PetersenRECL21, author = {Rasmus S. Petersen and Andrea Colins Rodriguez and Mathew H. Evans and Dario Campagner and Michaela S. E. Loft}, title = {Correction: {A} system for tracking whisker kinematics and whisker shape in three dimensions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008723}, doi = {10.1371/JOURNAL.PCBI.1008723}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PetersenRECL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PetrizzelliVNND21, author = {Marianyela Sabina Petrizzelli and Dominique de Vienne and Thibault Nidelet and Camille No{\^{u}}s and Christine Dillmann}, title = {Data integration uncovers the metabolic bases of phenotypic variation in yeast}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009157}, doi = {10.1371/JOURNAL.PCBI.1009157}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PetrizzelliVNND21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PetterssonJ21, author = {Susanne Pettersson and Martin Nilsson Jacobi}, title = {Spatial heterogeneity enhance robustness of large multi-species ecosystems}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008899}, doi = {10.1371/JOURNAL.PCBI.1008899}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PetterssonJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PettineLMW21, author = {Warren Woodrich Pettine and Kenway Louie and John D. Murray and Xiao{-}Jing Wang}, title = {Excitatory-inhibitory tone shapes decision strategies in a hierarchical neural network model of multi-attribute choice}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008791}, doi = {10.1371/JOURNAL.PCBI.1008791}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PettineLMW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Phillips21, author = {Steven Phillips}, title = {A reconstruction theory of relational schema induction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008641}, doi = {10.1371/JOURNAL.PCBI.1008641}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Phillips21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PickardBGRQS21, author = {Shanel C. Pickard and David J. Bertsch and Zoe Le Garrec and Roy E. Ritzmann and Roger D. Quinn and Nicholas S. Szczecinski}, title = {Internal state effects on behavioral shifts in freely behaving praying mantises (Tenodera sinensis)}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009618}, doi = {10.1371/JOURNAL.PCBI.1009618}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PickardBGRQS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PicklesCPSHFABD21, author = {Michael Pickles and Anne Cori and William J. M. Probert and Rafael Sauter and Robert Hinch and Sarah Fidler and Helen Ayles and Peter Bock and Deborah Donnell and Ethan Wilson and Estelle Piwowar{-}Manning and Sian Floyd and Richard J. Hayes and Christophe Fraser and HPTN}, title = {PopART-IBM, a highly efficient stochastic individual-based simulation model of generalised {HIV} epidemics developed in the context of the {HPTN} 071 (PopART) trial}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009301}, doi = {10.1371/JOURNAL.PCBI.1009301}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PicklesCPSHFABD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PiekosGBRGO21, author = {Samantha N. Piekos and Sadhana Gaddam and Pranav Bhardwaj and Prashanth Radhakrishnan and Ramanathan V. Guha and Anthony E. Oro}, title = {Biomedical Data Commons {(BMDC)} prioritizes B-lymphocyte non-coding genetic variants in Type 1 Diabetes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009382}, doi = {10.1371/JOURNAL.PCBI.1009382}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PiekosGBRGO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PienkoT21, author = {Tomasz Pienko and Joanna Trylska}, title = {Correction: Extracellular loops of BtuB facilitate transport of vitamin {B12} through the outer membrane of E. coli}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009696}, doi = {10.1371/JOURNAL.PCBI.1009696}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PienkoT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PineiroMEO21, author = {Miguel Pi{\~{n}}eiro and Wilson Mena and John Ewer and Patricio Orio}, title = {Extracting temporal relationships between weakly coupled peptidergic and motoneuronal signaling: Application to Drosophila ecdysis behavior}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008933}, doi = {10.1371/JOURNAL.PCBI.1008933}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PineiroMEO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PinkyBRS21, author = {Lubna Pinky and Crystal W. Burke and Charles J. Russell and Amber M. Smith}, title = {Quantifying dose-, strain-, and tissue-specific kinetics of parainfluenza virus infection}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009299}, doi = {10.1371/JOURNAL.PCBI.1009299}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PinkyBRS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PittiQBL21, author = {Alexandre Pitti and Mathias Quoy and Sofiane Boucenna and Catherine Lavandier}, title = {Brain-inspired model for early vocal learning and correspondence matching using free-energy optimization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008566}, doi = {10.1371/JOURNAL.PCBI.1008566}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PittiQBL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Pittman-Polletta21, author = {Benjamin R. Pittman{-}Polletta and Yangyang Wang and David A. Stanley and Charles E. Schroeder and Miles A. Whittington and Nancy J. Kopell}, title = {Differential contributions of synaptic and intrinsic inhibitory currents to speech segmentation via flexible phase-locking in neural oscillators}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008783}, doi = {10.1371/JOURNAL.PCBI.1008783}, timestamp = {Fri, 20 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Pittman-Polletta21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PlantonKAMMSWFR21, author = {Samuel Planton and Timo van Kerkoerle and Le{\"{\i}}la Abbih and Maxime Maheu and Florent Meyniel and Mariano Sigman and Liping Wang and Santiago Figueira and Sergio Romano and Stanislas Dehaene}, title = {A theory of memory for binary sequences: Evidence for a mental compression algorithm in humans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008598}, doi = {10.1371/JOURNAL.PCBI.1008598}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PlantonKAMMSWFR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PleydellSDLCJT21, author = {David R. J. Pleydell and Samuel Soubeyrand and Sylvie Dallot and G{\'{e}}rard Labonne and Jo{\"{e}}l Chadoeuf and Emmanuel Jacquot and Ga{\"{e}}l Th{\'{e}}baud}, title = {Correction: Estimation of the dispersal distances of an aphid-borne virus in a patchy landscape}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009315}, doi = {10.1371/JOURNAL.PCBI.1009315}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PleydellSDLCJT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PompeaR21, author = {Stephen Pompea and Pedro Russo}, title = {Ten simple rules for scientists getting started in science education}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009556}, doi = {10.1371/JOURNAL.PCBI.1009556}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PompeaR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Posada-Cespedes21, author = {Susana Posada{-}C{\'{e}}spedes and Gert van Zyl and Hesam Montazeri and Jack Kuipers and Soo{-}Yon Rhee and Roger D. Kouyos and Huldrych F. G{\"{u}}nthard and Niko Beerenwinkel}, title = {Comparing mutational pathways to lopinavir resistance in {HIV-1} subtypes {B} versus {C}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008363}, doi = {10.1371/JOURNAL.PCBI.1008363}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Posada-Cespedes21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PoshtkohiWMLDB21, author = {Alireza Poshtkohi and John J. Wade and Liam McDaid and Junxiu Liu and Mark Dallas and Angela Bithell}, title = {Mathematical modelling of human P2X-mediated plasma membrane electrophysiology and calcium dynamics in microglia}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009520}, doi = {10.1371/JOURNAL.PCBI.1009520}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PoshtkohiWMLDB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PospisilB21, author = {Dean A. Pospisil and Wyeth Bair}, title = {The unbiased estimation of the fraction of variance explained by a model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009212}, doi = {10.1371/JOURNAL.PCBI.1009212}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PospisilB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Pourjafar-Dehkordi21, author = {Danial Pourjafar{-}Dehkordi and Martin Zacharias}, title = {Binding-induced functional-domain motions in the Argonaute characterized by adaptive advanced sampling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009625}, doi = {10.1371/JOURNAL.PCBI.1009625}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Pourjafar-Dehkordi21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PrakaashCAK21, author = {Dheeraj Prakaash and Graham P. Cook and Oreste Acuto and Antreas C. Kalli}, title = {Multi-scale simulations of the {T} cell receptor reveal its lipid interactions, dynamics and the arrangement of its cytoplasmic region}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009232}, doi = {10.1371/JOURNAL.PCBI.1009232}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PrakaashCAK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PraljakIGSHGH21, author = {Niksa Praljak and Shamreen Iram and Utku Goreke and Gundeep Singh and Ailis Hill and Umut A. Gurkan and Michael Hinczewski}, title = {Integrating deep learning with microfluidics for biophysical classification of sickle red blood cells adhered to laminin}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008946}, doi = {10.1371/JOURNAL.PCBI.1008946}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PraljakIGSHGH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PremZKEDGCJ21, author = {Kiesha Prem and Kevin van Zandvoort and Petra Klepac and Rosalind M. Eggo and Nicholas G. Davies and Centre for the Mathematical Modelling of Infectious Diseases COVID and Alex R. Cook and Mark Jit}, title = {Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the {COVID-19} era}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009098}, doi = {10.1371/JOURNAL.PCBI.1009098}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PremZKEDGCJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PretoK21, author = {Jordane Preto and Isabelle Krimm}, title = {The intrinsically disordered N-terminus of the voltage-dependent anion channel}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008750}, doi = {10.1371/JOURNAL.PCBI.1008750}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PretoK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PrinceBHTCM21, author = {Luke Y. Prince and Travis Bacon and Rachel Humphries and Krasimira Tsaneva{-}Atanasova and Claudia Clopath and Jack R. Mellor}, title = {Separable actions of acetylcholine and noradrenaline on neuronal ensemble formation in hippocampal {CA3} circuits}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009435}, doi = {10.1371/JOURNAL.PCBI.1009435}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PrinceBHTCM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ProstGB21, author = {Vincent Prost and St{\'{e}}phane Gazut and Thomas Br{\"{u}}ls}, title = {A zero inflated log-normal model for inference of sparse microbial association networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009089}, doi = {10.1371/JOURNAL.PCBI.1009089}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ProstGB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PruggerEBWHL21, author = {Martina Prugger and Lukas Einkemmer and Samantha P. Beik and Perry T. Wasdin and Leonard A. Harris and Carlos F. Lopez}, title = {Unsupervised logic-based mechanism inference for network-driven biological processes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009035}, doi = {10.1371/JOURNAL.PCBI.1009035}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/PruggerEBWHL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/QiZZJ21, author = {Jing Qi and Yang Zhou and Zicen Zhao and Shuilin Jin}, title = {SDImpute: {A} statistical block imputation method based on cell-level and gene-level information for dropouts in single-cell RNA-seq data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009118}, doi = {10.1371/JOURNAL.PCBI.1009118}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/QiZZJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/QiuFSN21, author = {Yuchi Qiu and Lianna Fung and Thomas F. Schilling and Qing Nie}, title = {Multiple morphogens and rapid elongation promote segmental patterning during development}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009077}, doi = {10.1371/JOURNAL.PCBI.1009077}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/QiuFSN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/QiuMZY21, author = {Jiajun Qiu and Xiao Ma and Fanyi Zeng and Jingbin Yan}, title = {{RNA} editing regulates lncRNA splicing in human early embryo development}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009630}, doi = {10.1371/JOURNAL.PCBI.1009630}, timestamp = {Wed, 08 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/QiuMZY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/QuandelacyHGRCK21, author = {Talia M. Quandelacy and Jessica M. Healy and Bradford Greening and Dania M. Rodriguez and Koo{-}Whang Chung and Matthew J. Kuehnert and Brad J. Biggerstaff and Emilio Dirlikov and Luis Mier{-}y{-}Teran{-}Romero and Tyler M. Sharp and Stephen Waterman and Michael A. Johansson}, title = {Estimating incidence of infection from diverse data sources: Zika virus in Puerto Rico, 2016}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008812}, doi = {10.1371/JOURNAL.PCBI.1008812}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/QuandelacyHGRCK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RaatzSCBT21, author = {Michael Raatz and Saumil Shah and Guranda Chitadze and Monika Br{\"{u}}ggemann and Arne Traulsen}, title = {The impact of phenotypic heterogeneity of tumour cells on treatment and relapse dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008702}, doi = {10.1371/JOURNAL.PCBI.1008702}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RaatzSCBT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RabierBSSWGPS21, author = {Charles{-}Elie Rabier and Vincent Berry and Marnus Stoltz and Jo{\~{a}}o D. Santos and Wensheng Wang and Jean{-}Christophe Glaszmann and Fabio Pardi and C{\'{e}}line Scornavacca}, title = {On the inference of complex phylogenetic networks by Markov Chain Monte-Carlo}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008380}, doi = {10.1371/JOURNAL.PCBI.1008380}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RabierBSSWGPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Rac-Lubashevsky21, author = {Rachel Rac{-}Lubashevsky and Michael J. Frank}, title = {Analogous computations in working memory input, output and motor gating: Electrophysiological and computational modeling evidence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008971}, doi = {10.1371/JOURNAL.PCBI.1008971}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Rac-Lubashevsky21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RadevGCMEBK21, author = {Stefan T. Radev and Frederik Graw and Simiao Chen and Nico T. Mutters and Vanessa Eichel and Till B{\"{a}}rnighausen and Ullrich K{\"{o}}the}, title = {OutbreakFlow: Model-based Bayesian inference of disease outbreak dynamics with invertible neural networks and its application to the {COVID-19} pandemics in Germany}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009472}, doi = {10.1371/JOURNAL.PCBI.1009472}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RadevGCMEBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RaikovaKKDKC21, author = {Rositsa Raikova and Vessela Tz. Krasteva and Piotr Krutki and Hanna Drzymala{-}Celichowska and Katarzyna Krysciak and Jan Celichowski}, title = {Effect of synchronization of firings of different motor unit types on the force variability in a model of the rat medial gastrocnemius muscle}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008282}, doi = {10.1371/JOURNAL.PCBI.1008282}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RaikovaKKDKC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RalphSJHSCOSSS21, author = {Martin R. Ralph and Shu{-}qun Shi and Carl H. Johnson and Pavel Houdek and Tenjin C. Shrestha and Priya Crosby and John S. O'Neill and Martin Sl{\'{a}}dek and Adam R. Stinchcombe and Alena Sumov{\'{a}}}, title = {Targeted modification of the Per2 clock gene alters circadian function in mPer2luciferase (mPer2Luc) mice}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008987}, doi = {10.1371/JOURNAL.PCBI.1008987}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RalphSJHSCOSSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RamirezPBLE21, author = {Samuel A. Ramirez and Michael Pablo and Sean Burk and Daniel J. Lew and Timothy C. Elston}, title = {A novel stochastic simulation approach enables exploration of mechanisms for regulating polarity site movement}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008525}, doi = {10.1371/JOURNAL.PCBI.1008525}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RamirezPBLE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RamlowL21, author = {Lukas Ramlow and Benjamin Lindner}, title = {Interspike interval correlations in neuron models with adaptation and correlated noise}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009261}, doi = {10.1371/JOURNAL.PCBI.1009261}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RamlowL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RamseyMRALRZLFG21, author = {Jolene Ramsey and Brenley K. McIntosh and Daniel P. Renfro and Suzanne A. Aleksander and Sandra A. LaBonte and Curtis Ross and Adrienne E. Zweifel and Nathan Liles and Shabnam Farrar and Jason J. Gill and Ivan Erill and Sarah Ades and Tanya Z. Berardini and Jennifer A. Bennett and Siobhan M. Brady and Robert Britton and Seth Carbon and Steven M. Caruso and Dave Clements and Ritu Dalia and Meredith Defelice and Erin L. Doyle and Iddo Friedberg and Susan M. R. Gurney and Lee Hughes and Allison Johnson and Jason M. Kowalski and Donghui Li and Ruth C. Lovering and Tamara L. Mans and Fiona McCarthy and Sean D. Moore and Rebecca Murphy and Timothy D. Paustian and Sarah Perdue and Celeste N. Peterson and Birgit M. Pr{\"{u}}{\ss} and Margaret S. Saha and Robert R. Sheehy and John T. Tansey and Louise Temple and Alexander William Thorman and Saul Trevino and Amy Cheng Vollmer and Virginia Walbot and Joanne Willey and Deborah A. Siegele and James C. Hu}, title = {Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies {(CACAO)}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009463}, doi = {10.1371/JOURNAL.PCBI.1009463}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RamseyMRALRZLFG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RaoI21, author = {Satyajit D. Rao and Oleg A. Igoshin}, title = {Overlaid positive and negative feedback loops shape dynamical properties of PhoPQ two-component system}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008130}, doi = {10.1371/JOURNAL.PCBI.1008130}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RaoI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RasBALACMKHRPFM21, author = {Verena Ras and Gerrit Botha and Shaun Aron and Katie Lennard and Imane Allali and Shantelle Claassen{-}Weitz and Kilaza Samson Mwaikono and Dane Kennedy and Jessica R. Holmes and Gloria Rendon and Sumir Panji and Christopher J. Fields and Nicola J. Mulder}, title = {Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008640}, doi = {10.1371/JOURNAL.PCBI.1008640}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RasBALACMKHRPFM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RaseroSYV21, author = {Javier Rasero and Amy Isabella Sentis and Fang{-}Cheng Yeh and Timothy D. Verstynen}, title = {Integrating across neuroimaging modalities boosts prediction accuracy of cognitive ability}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008347}, doi = {10.1371/JOURNAL.PCBI.1008347}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RaseroSYV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RatnikovCRNS21, author = {Boris I. Ratnikov and Piotr Cieplak and Albert G. Remacle and Elise Nguyen and Jeffrey W. Smith}, title = {Quantitative profiling of protease specificity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008101}, doi = {10.1371/JOURNAL.PCBI.1008101}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RatnikovCRNS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RaviG21, author = {Sudharshan Ravi and Rudiyanto Gunawan}, title = {{\(\Delta\)}FBA - Predicting metabolic flux alterations using genome-scale metabolic models and differential transcriptomic data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009589}, doi = {10.1371/JOURNAL.PCBI.1009589}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RaviG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RaybouldMKLSD21, author = {Matthew I. J. Raybould and Claire Marks and Aleksandr Kovaltsuk and Alan P. Lewis and Jiye Shi and Charlotte M. Deane}, title = {Public Baseline and shared response structures support the theory of antibody repertoire functional commonality}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008781}, doi = {10.1371/JOURNAL.PCBI.1008781}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RaybouldMKLSD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ReimanLD21, author = {Derek Reiman and Brian T. Layden and Yang Dai}, title = {MiMeNet: Exploring microbiome-metabolome relationships using neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009021}, doi = {10.1371/JOURNAL.PCBI.1009021}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ReimanLD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ReimanVXSCSSK21, author = {Derek Reiman and Godhev Kumar Manakkat Vijay and Heping Xu and Andrew Sonin and Dianyu Chen and Nathan Salomonis and Harinder Singh and Aly A. Khan}, title = {Pseudocell Tracer - {A} method for inferring dynamic trajectories using scRNAseq and its application to {B} cells undergoing immunoglobulin class switch recombination}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008094}, doi = {10.1371/JOURNAL.PCBI.1008094}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ReimanVXSCSSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RembezaE21, author = {Elzbieta Rembeza and Martin K. M. Engqvist}, title = {Experimental and computational investigation of enzyme functional annotations uncovers misannotation in the {EC} 1.1.3.15 enzyme class}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009446}, doi = {10.1371/JOURNAL.PCBI.1009446}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/RembezaE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RemmeBASSK21, author = {Michiel W. H. Remme and Urs Bergmann and Denis Alevi and Susanne Schreiber and Henning Sprekeler and Richard Kempter}, title = {Hebbian plasticity in parallel synaptic pathways: {A} circuit mechanism for systems memory consolidation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009681}, doi = {10.1371/JOURNAL.PCBI.1009681}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RemmeBASSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RenC21, author = {Jingwen Ren and Mark J. P. Chaisson}, title = {lra: {A} long read aligner for sequences and contigs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009078}, doi = {10.1371/JOURNAL.PCBI.1009078}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RenC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Reyes21, author = {Alex D. Reyes}, title = {Mathematical framework for place coding in the auditory system}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009251}, doi = {10.1371/JOURNAL.PCBI.1009251}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Reyes21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RibeiroSMARM21, author = {Alison Pereira Ribeiro and N{\'{a}}dia F{\'{e}}lix Felipe da Silva and Fernanda Neiva Mesquita and Priscila de C{\'{a}}ssia Souza Ara{\'{u}}jo and Thierson Couto Rosa and Jos{\'{e}} Neiva Mesquita{-}Neto}, title = {Machine learning approach for automatic recognition of tomato-pollinating bees based on their buzzing-sounds}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009426}, doi = {10.1371/JOURNAL.PCBI.1009426}, timestamp = {Tue, 04 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RibeiroSMARM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RichardACSD21, author = {Quentin Richard and Samuel Alizon and Marc Choisy and Mircea{-}Traian Sofonea and Rams{\`{e}}s Djidjou{-}Demasse}, title = {Age-structured non-pharmaceutical interventions for optimal control of {COVID-19} epidemic}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008776}, doi = {10.1371/JOURNAL.PCBI.1008776}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/RichardACSD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Richie-HalfordY21, author = {Adam C. Richie{-}Halford and Jason D. Yeatman and Noah Simon and Ariel Rokem}, title = {Multidimensional analysis and detection of informative features in human brain white matter}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009136}, doi = {10.1371/JOURNAL.PCBI.1009136}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Richie-HalfordY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RichmondKKAW21, author = {Phillip Andrew Richmond and Alice Mary Kaye and Godfrain Jacques Kounkou and Tamar Vered Av{-}Shalom and Wyeth W. Wasserman}, title = {Demonstrating the utility of flexible sequence queries against indexed short reads with FlexTyper}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008815}, doi = {10.1371/JOURNAL.PCBI.1008815}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RichmondKKAW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RilligBLLMRSM21, author = {Matthias C. Rillig and Karine Bonneval and Christian de Lutz and Johannes Lehmann and India Mansour and Regine Rapp and Sasa Spacal and Vera Meyer}, title = {Ten simple rules for hosting artists in a scientific lab}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008675}, doi = {10.1371/JOURNAL.PCBI.1008675}, timestamp = {Mon, 03 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RilligBLLMRSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RipollCW21, author = {Daniel R. Ripoll and Sidhartha Chaudhury and Anders Wallqvist}, title = {Using the antibody-antigen binding interface to train image-based deep neural networks for antibody-epitope classification}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008864}, doi = {10.1371/JOURNAL.PCBI.1008864}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RipollCW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RiveraHN21, author = {Catalina Rivera and David Hofmann and Ilya Nemenman}, title = {Inferring phenomenological models of first passage processes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008740}, doi = {10.1371/JOURNAL.PCBI.1008740}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RiveraHN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RobesonOKZDFB21, author = {Michael S. Robeson II and Devon R. O'Rourke and Benjamin D. Kaehler and Michal Ziemski and Matthew R. Dillon and Jeffrey T. Foster and Nicholas A. Bokulich}, title = {RESCRIPt: Reproducible sequence taxonomy reference database management}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009581}, doi = {10.1371/JOURNAL.PCBI.1009581}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/RobesonOKZDFB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RobinsonRSWMD21, author = {Sarah A. Robinson and Matthew I. J. Raybould and Constantin Schneider and Wing Ki Wong and Claire Marks and Charlotte M. Deane}, title = {Epitope profiling using computational structural modelling demonstrated on coronavirus-binding antibodies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009675}, doi = {10.1371/JOURNAL.PCBI.1009675}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RobinsonRSWMD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RocheBB21, author = {Rahmatullah Roche and Sutanu Bhattacharya and Debswapna Bhattacharya}, title = {Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008753}, doi = {10.1371/JOURNAL.PCBI.1008753}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RocheBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RocherGNM21, author = {Vincent Rocher and Matthieu Genais and Elissar Nassereddine and Rapha{\"{e}}l Mourad}, title = {DeepG4: {A} deep learning approach to predict cell-type specific active G-quadruplex regions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009308}, doi = {10.1371/JOURNAL.PCBI.1009308}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RocherGNM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RoderoSMLWOGAPV21, author = {Crist{\'{o}}bal Rodero and Marina Strocchi and Maciej Marciniak and Stefano Longobardi and John Whitaker and Mark D. O'Neill and Karli Gillette and Christoph M. Augustin and Gernot Plank and Edward J. Vigmond and Pablo Lamata and Steven A. Niederer}, title = {Linking statistical shape models and simulated function in the healthy adult human heart}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008851}, doi = {10.1371/JOURNAL.PCBI.1008851}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RoderoSMLWOGAPV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Rodriguez-MierP21, author = {Pablo Rodr{\'{\i}}guez{-}Mier and Nathalie Poupin and Carlo de Blasio and Laurent Le Cam and Fabien Jourdan}, title = {{DEXOM:} Diversity-based enumeration of optimal context-specific metabolic networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008730}, doi = {10.1371/JOURNAL.PCBI.1008730}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Rodriguez-MierP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RogersL21, author = {Simon Rogers and Virgilio L. Lew}, title = {{PIEZO1} and the mechanism of the long circulatory longevity of human red blood cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008496}, doi = {10.1371/JOURNAL.PCBI.1008496}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RogersL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RogersL21a, author = {Simon Rogers and Virgilio L. Lew}, title = {Up-down biphasic volume response of human red blood cells to {PIEZO1} activation during capillary transits}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008706}, doi = {10.1371/JOURNAL.PCBI.1008706}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RogersL21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RomboutsG21, author = {Jan Rombouts and Lendert Gelens}, title = {Dynamic bistable switches enhance robustness and accuracy of cell cycle transitions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008231}, doi = {10.1371/JOURNAL.PCBI.1008231}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RomboutsG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RossbroichTBTN21, author = {Julian Rossbroich and Daniel Trotter and John Beninger and Katalin Toth and Richard Naud}, title = {Linear-nonlinear cascades capture synaptic dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008013}, doi = {10.1371/JOURNAL.PCBI.1008013}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RossbroichTBTN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Rossi-Goldthorpe21, author = {Rosa A. Rossi{-}Goldthorpe and Yuan Chang Leong and Pantelis Leptourgos and Philip R. Corlett}, title = {Paranoia, self-deception and overconfidence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009453}, doi = {10.1371/JOURNAL.PCBI.1009453}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Rossi-Goldthorpe21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RothSG21, author = {Kai R{\"{o}}th and Shuai Shao and Julijana Gjorgjieva}, title = {Efficient population coding depends on stimulus convergence and source of noise}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008897}, doi = {10.1371/JOURNAL.PCBI.1008897}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RothSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RoyHCRJ21, author = {Rishi Das Roy and Outi Hallikas and Mona M. Christensen and Elodie Renvois{\'{e}} and Jukka Jernvall}, title = {Chromosomal neighbourhoods allow identification of organ specific changes in gene expression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008947}, doi = {10.1371/JOURNAL.PCBI.1008947}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RoyHCRJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RozovaAGEKSGGWT21, author = {Vlada S. Rozova and Ayad G. Anwer and Anna E. Guller and Hamidreza Aboulkheyr Es and Zahra Khabir and Anastasiya I. Sokolova and Maxim U. Gavrilov and Ewa M. Goldys and Majid Ebrahimi Warkiani and Jean{-}Paul Thiery and Andrei V. Zvyagin}, title = {Machine learning reveals mesenchymal breast carcinoma cell adaptation in response to matrix stiffness}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009193}, doi = {10.1371/JOURNAL.PCBI.1009193}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RozovaAGEKSGGWT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RubinID21, author = {Ilan N. Rubin and Iaroslav Ispolatov and Michael Doebeli}, title = {Evolution to alternative levels of stable diversity leaves areas of niche space unexplored}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008650}, doi = {10.1371/JOURNAL.PCBI.1008650}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/RubinID21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Rubio-TevesDPSP21, author = {Mario Rubio{-}Teves and Sergio Diez{-}Hermano and C{\'{e}}sar Porrero and Abel Sanchez{-}Jimenez and Luc{\'{\i}}a Prensa and Francisco Clasc{\'{a}} and Mar{\'{\i}}a Garc{\'{\i}}a{-}Amado and Jos{\'{e}} Antonio Villacorta{-}Atienza}, title = {Benchmarking of tools for axon length measurement in individually-labeled projection neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009051}, doi = {10.1371/JOURNAL.PCBI.1009051}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Rubio-TevesDPSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RudeltMWP21, author = {Lucas Rudelt and Daniel Gonz{\'{a}}lez Marx and Michael Wibral and Viola Priesemann}, title = {Embedding optimization reveals long-lasting history dependence in neural spiking activity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008927}, doi = {10.1371/JOURNAL.PCBI.1008927}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RudeltMWP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RudigerPHKR21, author = {Daniel R{\"{u}}diger and Lars Pelz and Marc D. Hein and Sascha Young Kupke and Udo Reichl}, title = {Multiscale model of defective interfering particle replication for influenza {A} virus infection in animal cell culture}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009357}, doi = {10.1371/JOURNAL.PCBI.1009357}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RudigerPHKR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RussoSAI21, author = {Andrea Di Russo and Dimitar Stanev and St{\'{e}}phane Armand and Auke Jan Ijspeert}, title = {Sensory modulation of gait characteristics in human locomotion: {A} neuromusculoskeletal modeling study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008594}, doi = {10.1371/JOURNAL.PCBI.1008594}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RussoSAI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RutkowskiV21, author = {David M. Rutkowski and Dimitrios Vavylonis}, title = {Discrete mechanical model of lamellipodial actin network implements molecular clutch mechanism and generates arcs and microspikes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009506}, doi = {10.1371/JOURNAL.PCBI.1009506}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RutkowskiV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/RyomBST21, author = {Kwang Il Ryom and Vezha Boboeva and Oleksandra Soldatkina and Alessandro Treves}, title = {Latching dynamics as a basis for short-term recall}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008809}, doi = {10.1371/JOURNAL.PCBI.1008809}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/RyomBST21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SaberskiBGALRS21, author = {Erik Saberski and Antonia K. Bock and Rachel Goodridge and Vitul Agarwal and Tom Lorimer and Scott A. Rifkin and George Sugihara}, title = {Networks of Causal Linkage Between Eigenmodes Characterize Behavioral Dynamics of Caenorhabditis elegans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009329}, doi = {10.1371/JOURNAL.PCBI.1009329}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SaberskiBGALRS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SachdevaMWP21, author = {Vedant Sachdeva and Thierry Mora and Aleksandra M. Walczak and Stephanie E. Palmer}, title = {Optimal prediction with resource constraints using the information bottleneck}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008743}, doi = {10.1371/JOURNAL.PCBI.1008743}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SachdevaMWP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SaetraEH21, author = {Marte J. S{\ae}tra and Gaute T. Einevoll and Geir Halnes}, title = {An electrodiffusive neuron-extracellular-glia model for exploring the genesis of slow potentials in the brain}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008143}, doi = {10.1371/JOURNAL.PCBI.1008143}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SaetraEH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SaghaleyniMBNR21, author = {Rasool Saghaleyni and Azam Sheikh Muhammad and Pramod Bangalore and Jens Nielsen and Jonathan L. Robinson}, title = {Machine learning-based investigation of the cancer protein secretory pathway}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008898}, doi = {10.1371/JOURNAL.PCBI.1008898}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SaghaleyniMBNR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SahOLLB21, author = {Pratha Sah and Michael C. Otterstatter and Stephan T. Leu and Sivan Leviyang and Shweta Bansal}, title = {Revealing mechanisms of infectious disease spread through empirical contact networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009604}, doi = {10.1371/JOURNAL.PCBI.1009604}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SahOLLB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SahnehBKCFNLSHS21, author = {Faryad Sahneh and Meghan A. Balk and Marina Kisley and Chi{-}Kwan Chan and Mercury Fox and Brian Nord and Eric Lyons and Tyson Lee Swetnam and Daniela Huppenkothen and Will Sutherland and Ramona L. Walls and Daven P. Quinn and Tonantzin Tarin and David S. LeBauer and David Ribes and Dunbar P. Birnie III and Carol Lushbough and Eric Carr and Grey Nearing and Jeremy Fischer and Kevin Tyle and Luis Carrasco and Meagan Lang and Peter W. Rose and Richard R. Rushforth and Samapriya Roy and Thomas Matheson and Tina Lee and C. Titus Brown and Tracy K. Teal and Monica Papes and Stephen G. Kobourov and Nirav C. Merchant}, title = {Ten simple rules to cultivate transdisciplinary collaboration in data science}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008879}, doi = {10.1371/JOURNAL.PCBI.1008879}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SahnehBKCFNLSHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SainiG21, author = {Anshul Saini and James M. Gallo}, title = {Epigenetic instability may alter cell state transitions and anticancer drug resistance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009307}, doi = {10.1371/JOURNAL.PCBI.1009307}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SainiG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SakashitaYYKK21, author = {Misaki Sakashita and Shintaro Yamasaki and Kentaro Yaji and Atsushi Kawamoto and Shigeru Kondo}, title = {Three-dimensional topology optimization model to simulate the external shapes of bone}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009043}, doi = {10.1371/JOURNAL.PCBI.1009043}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SakashitaYYKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Salahshour21, author = {Mohammad Salahshour}, title = {Freedom to choose between public resources promotes cooperation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008703}, doi = {10.1371/JOURNAL.PCBI.1008703}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Salahshour21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SandhuBM21, author = {Simran K. Sandhu and Christopher D. Bayliss and Andrew Morozov}, title = {How does feedback from phage infections influence the evolution of phase variation in Campylobacter?}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009067}, doi = {10.1371/JOURNAL.PCBI.1009067}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SandhuBM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SarathyBKAEA21, author = {Chaitra Sarathy and Marian Breuer and Martina Kutmon and Michiel E. Adriaens and Chris T. A. Evelo and Ilja C. W. Arts}, title = {Comparison of metabolic states using genome-scale metabolic models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009522}, doi = {10.1371/JOURNAL.PCBI.1009522}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SarathyBKAEA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SarayRAMVLBGRDM21, author = {S{\'{a}}ra S{\'{a}}ray and Christian A. R{\"{o}}ssert and Shailesh Appukuttan and Rosanna Migliore and Paola Vitale and Carmen Alina Lupascu and Luca Leonardo Bologna and Werner Van Geit and Armando Romani and Andrew P. Davison and Eilif M{\"{u}}ller and Tam{\'{a}}s F. Freund and Szabolcs K{\'{a}}li}, title = {HippoUnit: {A} software tool for the automated testing and systematic comparison of detailed models of hippocampal neurons based on electrophysiological data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008114}, doi = {10.1371/JOURNAL.PCBI.1008114}, timestamp = {Tue, 04 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SarayRAMVLBGRDM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SarkarLBPZM21, author = {Debolina Sarkar and Marine Landa and Anindita Bandyopadhyay and Himadri B. Pakrasi and Jonathan P. Zehr and Costas D. Maranas}, title = {Elucidation of trophic interactions in an unusual single-cell nitrogen-fixing symbiosis using metabolic modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008983}, doi = {10.1371/JOURNAL.PCBI.1008983}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SarkarLBPZM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SarmashghiBRTMB21, author = {Shahab Sarmashghi and Metin Balaban and Eleonora Rachtman and Behrouz Touri and Siavash Mirarab and Vineet Bafna}, title = {Estimating repeat spectra and genome length from low-coverage genome skims with {RESPECT}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009449}, doi = {10.1371/JOURNAL.PCBI.1009449}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SarmashghiBRTMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SarnataroRM21, author = {Sergio Sarnataro and Andrea Riba and Nacho Molina}, title = {Regulation of transcription reactivation dynamics exiting mitosis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009354}, doi = {10.1371/JOURNAL.PCBI.1009354}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SarnataroRM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SaseK21, author = {Takumi Sase and Keiichi Kitajo}, title = {The metastable brain associated with autistic-like traits of typically developing individuals}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008929}, doi = {10.1371/JOURNAL.PCBI.1008929}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SaseK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SastryHHPKP21, author = {Anand V. Sastry and Alyssa Hu and David Heckmann and Saugat Poudel and Erol S. Kavvas and Bernhard O. Palsson}, title = {Independent component analysis recovers consistent regulatory signals from disparate datasets}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008647}, doi = {10.1371/JOURNAL.PCBI.1008647}, timestamp = {Fri, 24 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SastryHHPKP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ScelsiNGAIP21, author = {Marzia Antonella Scelsi and Valerio Napolioni and Michael D. Greicius and Andr{\'{e}} Altmann and Alzheimer's Disease Neuroimaging Initiative and Alzheimer's Disease Sequencing Project}, title = {Network propagation of rare variants in Alzheimer's disease reveals tissue-specific hub genes and communities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008517}, doi = {10.1371/JOURNAL.PCBI.1008517}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ScelsiNGAIP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchaberPLWKPERC21, author = {Kathryn L. Schaber and T. Alex Perkins and Alun L. Lloyd and Lance A. Waller and Uriel Kitron and Valerie A. Paz{-}Soldan and John P. Elder and Alan L. Rothman and David J. Civitello and William H. Elson and Amy C. Morrison and Thomas W. Scott and Gonzalo M. Vazquez{-}Prokopec}, title = {Disease-driven reduction in human mobility influences human-mosquito contacts and dengue transmission dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008627}, doi = {10.1371/JOURNAL.PCBI.1008627}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchaberPLWKPERC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchaworonkowV21, author = {Natalie Schaworonkow and Bradley Voytek}, title = {Enhancing oscillations in intracranial electrophysiological recordings with data-driven spatial filters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009298}, doi = {10.1371/JOURNAL.PCBI.1009298}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchaworonkowV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchindlerMSLBHH21, author = {Daniel Schindler and Ted Moldenhawer and Maike Stange and Valentino Lepro and Carsten Beta and Matthias Holschneider and Wilhelm Huisinga}, title = {Analysis of protrusion dynamics in amoeboid cell motility by means of regularized contour flows}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009268}, doi = {10.1371/JOURNAL.PCBI.1009268}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchindlerMSLBHH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchmidtHDK21, author = {Helmut Schmidt and Gerald Hahn and Gustavo Deco and Thomas R. Kn{\"{o}}sche}, title = {Ephaptic coupling in white matter fibre bundles modulates axonal transmission delays}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007858}, doi = {10.1371/JOURNAL.PCBI.1007858}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchmidtHDK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchmiesterSBCDE21, author = {Leonard Schmiester and Yannik Sch{\"{a}}lte and Frank T. Bergmann and Tacio Camba and Erika Dudkin and Janine Egert and Fabian Fr{\"{o}}hlich and Lara Fuhrmann and Adrian L. Hauber and Svenja Kemmer and Polina A. Lakrisenko and Carolin Loos and Simon Merkt and Wolfgang M{\"{u}}ller and Dilan Pathirana and Elba Raim{\'{u}}ndez{-}{\'{A}}lvarez and Lukas Refisch and Marcus Rosenblatt and Paul Stapor and Philipp St{\"{a}}dter and Dantong Wang and Franz{-}Georg Wieland and Julio R. Banga and Jens Timmer and Alejandro F. Villaverde and Sven Sahle and Clemens Kreutz and Jan Hasenauer and Daniel Weindl}, title = {PEtab - Interoperable specification of parameter estimation problems in systems biology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008646}, doi = {10.1371/JOURNAL.PCBI.1008646}, timestamp = {Wed, 07 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SchmiesterSBCDE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchmitzEMM21, author = {Samuel Schmitz and Moritz Ertelt and Rainer Merkl and Jens Meiler}, title = {Rosetta design with co-evolutionary information retains protein function}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008568}, doi = {10.1371/JOURNAL.PCBI.1008568}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchmitzEMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchmuckerFFFSS21, author = {Robin Schmucker and Gabriele Farina and James R. Faeder and Fabian Fr{\"{o}}hlich and Ali Sinan Saglam and Tuomas Sandholm}, title = {Combination treatment optimization using a pan-cancer pathway model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009689}, doi = {10.1371/JOURNAL.PCBI.1009689}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchmuckerFFFSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Schneckenreither21, author = {G{\"{u}}nter Schneckenreither and Philipp Tschandl and Claire Rippinger and Christoph Sinz and Dominik Brunmeir and Nikolas Popper and Harald Kittler}, title = {Reproduction of patterns in melanocytic proliferations by agent-based simulation and geometric modeling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008660}, doi = {10.1371/JOURNAL.PCBI.1008660}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Schneckenreither21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Schneider-Lunitz21, author = {Valentin Schneider{-}Lunitz and Jorge Ruiz{-}Orera and Norbert H{\"{u}}bner and Sebastiaan van Heesch}, title = {Multifunctional RNA-binding proteins influence mRNA abundance and translational efficiency of distinct sets of target genes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009658}, doi = {10.1371/JOURNAL.PCBI.1009658}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Schneider-Lunitz21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ScholichSMSNMBB21, author = {Andr{\'{e}} Scholich and Simon Syga and Hern{\'{a}}n Morales{-}Navarrete and Fabian Segovia{-}Miranda and Hidenori Nonaka and Kirstin Meyer and Walter de Back and Lutz Brusch and Yannis Kalaidzidis and Marino Zerial and Frank J{\"{u}}licher and Benjamin M. Friedrich}, title = {Correction: Quantification of nematic cell polarity in three-dimensional tissues}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009349}, doi = {10.1371/JOURNAL.PCBI.1009349}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ScholichSMSNMBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchollRH21, author = {Carolin Scholl and Michael Everett Rule and Matthias H. Hennig}, title = {The information theory of developmental pruning: Optimizing global network architectures using local synaptic rules}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009458}, doi = {10.1371/JOURNAL.PCBI.1009458}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchollRH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchroederK21, author = {Ryan T. Schroeder and Arthur D. Kuo}, title = {Elastic energy savings and active energy cost in a simple model of running}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009608}, doi = {10.1371/JOURNAL.PCBI.1009608}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchroederK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchulzBSCMNR21, author = {Steven Schulz and Sebastien Boyer and Matteo Smerlak and Simona Cocco and R{\'{e}}mi Monasson and Cl{\'{e}}ment Nizak and Olivier Rivoire}, title = {Parameters and determinants of responses to selection in antibody libraries}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008751}, doi = {10.1371/JOURNAL.PCBI.1008751}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SchulzBSCMNR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchulzKKA21, author = {Christian Schulz and Tjasa Kumelj and Emil Karlsen and Eivind Almaas}, title = {Genome-scale metabolic modelling when changes in environmental conditions affect biomass composition}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008528}, doi = {10.1371/JOURNAL.PCBI.1008528}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SchulzKKA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SebastianSMM21, author = {Jilt Sebastian and Mriganka Sur and Hema A. Murthy and Mathew Magimai{-}Doss}, title = {Signal-to-signal neural networks for improved spike estimation from calcium imaging data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007921}, doi = {10.1371/JOURNAL.PCBI.1007921}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SebastianSMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SeeligerAGBGG21, author = {Katja Seeliger and Luca Ambrogioni and Yagmur G{\"{u}}{\c{c}}l{\"{u}}t{\"{u}}rk and L. M. van den Bulk and Umut G{\"{u}}{\c{c}}l{\"{u}} and Marcel A. J. van Gerven}, title = {End-to-end neural system identification with neural information flow}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008558}, doi = {10.1371/JOURNAL.PCBI.1008558}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SeeligerAGBGG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SelingerA21, author = {Christian Selinger and Samuel Alizon}, title = {Reconstructing contact network structure and cross-immunity patterns from multiple infection histories}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009375}, doi = {10.1371/JOURNAL.PCBI.1009375}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SelingerA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SeoaneC21, author = {Beatriz Seoane and Alessandra Carbone}, title = {The complexity of protein interactions unravelled from structural disorder}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008546}, doi = {10.1371/JOURNAL.PCBI.1008546}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SeoaneC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Serrano-SolanoF21, author = {Beatriz Serrano{-}Solano and Melanie Christine F{\"{o}}ll and Crist{\'{o}}bal Gallardo{-}Alba and Anika Erxleben and Helena Rasche and Saskia D. Hiltemann and Matthias Fahrner and Mark J. Dunning and Marcel H. Schulz and Be{\'{a}}ta Scholtz and Dave Clements and Anton Nekrutenko and B{\'{e}}r{\'{e}}nice Batut and Bj{\"{o}}rn A. Gr{\"{u}}ning}, title = {Fostering accessible online education using Galaxy as an e-learning platform}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008923}, doi = {10.1371/JOURNAL.PCBI.1008923}, timestamp = {Thu, 25 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Serrano-SolanoF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShahR21, author = {Rohan N. Shah and Alexander J. Ruthenburg}, title = {Sequence deeper without sequencing more: Bayesian resolution of ambiguously mapped reads}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008926}, doi = {10.1371/JOURNAL.PCBI.1008926}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShahR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShahWPM21, author = {Denis A. Shah and Erick D. De Wolf and Pierce A. Paul and Laurence V. Madden}, title = {Accuracy in the prediction of disease epidemics when ensembling simple but highly correlated models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008831}, doi = {10.1371/JOURNAL.PCBI.1008831}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShahWPM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShahidiPSTCN21, author = {Niloofar Shahidi and Michael Pan and Soroush Safaei and Kenneth Tran and Edmund J. Crampin and David P. Nickerson}, title = {Hierarchical semantic composition of biosimulation models using bond graphs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008859}, doi = {10.1371/JOURNAL.PCBI.1008859}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShahidiPSTCN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShahmohammadiLW21, author = {Mehrdad Shahmohammadi and Hongxing Luo and Philip Westphal and Richard N. Cornelussen and Frits W. Prinzen and Tammo Delhaas}, title = {Hemodynamics-driven mathematical model of first and second heart sound generation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009361}, doi = {10.1371/JOURNAL.PCBI.1009361}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShahmohammadiLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShaoWZJHZ21, author = {Zhonghe Shao and Ting Wang and Meng Zhang and Zhou Jiang and Shuiping Huang and Ping Zeng}, title = {{IUSMMT:} Survival mediation analysis of gene expression with multiple {DNA} methylation exposures and its application to cancers of {TCGA}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009250}, doi = {10.1371/JOURNAL.PCBI.1009250}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShaoWZJHZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SharkerK21, author = {Yushuf Sharker and Eben Kenah}, title = {Estimating and interpreting secondary attack risk: Binomial considered biased}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008601}, doi = {10.1371/JOURNAL.PCBI.1008601}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SharkerK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShenZ21, author = {Qunlun Shen and Shihua Zhang}, title = {Approximate distance correlation for selecting highly interrelated genes across datasets}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009548}, doi = {10.1371/JOURNAL.PCBI.1009548}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShenZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SherfS21, author = {Nimrod Sherf and Maoz Shamir}, title = {{STDP} and the distribution of preferred phases in the whisker system}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009353}, doi = {10.1371/JOURNAL.PCBI.1009353}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SherfS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SherrillTBN21, author = {Samantha P. Sherrill and Nicholas M. Timme and John M. Beggs and Ehren L. Newman}, title = {Partial information decomposition reveals that synergistic neural integration is greater downstream of recurrent information flow in organotypic cortical cultures}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009196}, doi = {10.1371/JOURNAL.PCBI.1009196}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SherrillTBN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShestopaloffDGX21, author = {Konstantin Shestopaloff and Mei Dong and Fan Gao and Wei Xu}, title = {{DCMD:} Distance-based classification using mixture distributions on microbiome data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008799}, doi = {10.1371/JOURNAL.PCBI.1008799}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShestopaloffDGX21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShiLD21, author = {Zhenzhen Shi and Yang Li and Majid Jaberi Douraki}, title = {Hybrid computational modeling demonstrates the utility of simulating complex cellular networks in type 1 diabetes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009413}, doi = {10.1371/JOURNAL.PCBI.1009413}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShiLD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShiLFLZ21, author = {Kaiwen Shi and Tao Liu and Hanjiang Fu and Wuju Li and Xiaofei Zheng}, title = {Genome-wide analysis of lncRNA stability in human}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008918}, doi = {10.1371/JOURNAL.PCBI.1008918}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ShiLFLZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ShortenSL21, author = {David Peter Shorten and Richard E. Spinney and Joseph T. Lizier}, title = {Estimating Transfer Entropy in Continuous Time Between Neural Spike Trains or Other Event-Based Data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008054}, doi = {10.1371/JOURNAL.PCBI.1008054}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ShortenSL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SierksmaB21, author = {Martijn C. Sierksma and J. Gerard G. Borst}, title = {Using ephaptic coupling to estimate the synaptic cleft resistivity of the calyx of Held synapse}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009527}, doi = {10.1371/JOURNAL.PCBI.1009527}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SierksmaB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SikoraBBGCH21, author = {Mateusz Sikora and S{\"{o}}ren von B{\"{u}}low and Florian E. C. Blanc and Michael Gecht and Roberto Covino and Gerhard Hummer}, title = {Computational epitope map of SARS-CoV-2 spike protein}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008790}, doi = {10.1371/JOURNAL.PCBI.1008790}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SikoraBBGCH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SilvermanBJDDMD21, author = {Justin D. Silverman and Rachael J. Bloom and Sharon Jiang and Heather K. Durand and Eric Dallow and Sayan Mukherjee and Lawrence A. David}, title = {Measuring and mitigating {PCR} bias in microbiota datasets}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009113}, doi = {10.1371/JOURNAL.PCBI.1009113}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SilvermanBJDDMD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SimionatoHCBFWL21, author = {Greta Simionato and Konrad Hinkelmann and Revaz Chachanidze and Paola Bianchi and Elisa Fermo and Richard van Wijk and Marc Leonetti and Christian Wagner and Lars Kaestner and Stephan Quint}, title = {Red blood cell phenotyping from 3D confocal images using artificial neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008934}, doi = {10.1371/JOURNAL.PCBI.1008934}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SimionatoHCBFWL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SimonBRTKSS21, author = {Ralph Simon and Karol Bakunowski and Angel Eduardo Reyes{-}Vasques and Marco Tschapka and Mirjam Kn{\"{o}}rnschild and Jan Steckel and Dan Stowell}, title = {Acoustic traits of bat-pollinated flowers compared to flowers of other pollination syndromes and their echo-based classification using convolutional neural networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009706}, doi = {10.1371/JOURNAL.PCBI.1009706}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SimonBRTKSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SinSSKC21, author = {Yeonju Sin and Hee Young Seon and Yun Kyoung Shin and Oh{-}Sang Kwon and Dongil Chung}, title = {Subjective optimality in finite sequential decision-making}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009633}, doi = {10.1371/JOURNAL.PCBI.1009633}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SinSSKC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SinghELTSLATTZP21, author = {Larry N. Singh and Brian Ennis and Bryn Loneragan and Noah L. Tsao and M. Isabel G. Lopez Sanchez and Jianping Li and Patrick Acheampong and Oanh Tran and Ian A. Trounce and Yuankun Zhu and Prasanth Potluri and Regeneron Genetics Center and Beverly S. Emanuel and Daniel J. Rader and Zoltan Arany and Scott M. Damrauer and Adam C. Resnick and Stewart A. Anderson and Douglas C. Wallace}, title = {MitoScape: {A} big-data, machine-learning platform for obtaining mitochondrial {DNA} from next-generation sequencing data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009594}, doi = {10.1371/JOURNAL.PCBI.1009594}, timestamp = {Tue, 08 Feb 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SinghELTSLATTZP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SinhaMDASS21, author = {Ankur Sinha and Christoph Metzner and Neil Davey and Roderick Adams and Michael Schmuker and Volker Steuber}, title = {Growth rules for the repair of Asynchronous Irregular neuronal networks after peripheral lesions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008996}, doi = {10.1371/JOURNAL.PCBI.1008996}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SinhaMDASS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SipHVWWSVGBJ21, author = {Viktor Sip and Meysam Hashemi and Anirudh Nihalani Vattikonda and Michael Marmaduke Woodman and Huifang E. Wang and Julia Scholly and Samuel Medina Villalon and Maxime Guye and Fabrice Bartolomei and Viktor K. Jirsa}, title = {Data-driven method to infer the seizure propagation patterns in an epileptic brain from intracranial electroencephalography}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008689}, doi = {10.1371/JOURNAL.PCBI.1008689}, timestamp = {Fri, 12 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SipHVWWSVGBJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SipSGBJ21, author = {Viktor Sip and Julia Scholly and Maxime Guye and Fabrice Bartolomei and Viktor K. Jirsa}, title = {Evidence for spreading seizure as a cause of theta-alpha activity electrographic pattern in stereo-EEG seizure recordings}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008731}, doi = {10.1371/JOURNAL.PCBI.1008731}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SipSGBJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SkillingECSOAZ21, author = {Quinton M. Skilling and Bolaji Eniwaye and Brittany C. Clawson and James Shaver and Nicolette Ognjanovski and Sara J. Aton and Michal Zochowski}, title = {Acetylcholine-gated current translates wake neuronal firing rate information into a spike timing-based code in Non-REM sleep, stabilizing neural network dynamics during memory consolidation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009424}, doi = {10.1371/JOURNAL.PCBI.1009424}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SkillingECSOAZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SmallsW21, author = {Danielle Smalls and Greg Wilson}, title = {Ten quick tips for staying safe online}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008563}, doi = {10.1371/JOURNAL.PCBI.1008563}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SmallsW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Smirnov21, author = {Vladimir Smirnov}, title = {Recursive {MAGUS:} Scalable and accurate multiple sequence alignment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008950}, doi = {10.1371/JOURNAL.PCBI.1008950}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Smirnov21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SmithCKG21, author = {Michael R. Smith and Rachel Chan and Maaz Khurram and Paul M. K. Gordon}, title = {Evaluating the effectiveness of ensemble voting in improving the accuracy of consensus signals produced by various {DTWA} algorithms from step-current signals generated during nanopore sequencing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009350}, doi = {10.1371/JOURNAL.PCBI.1009350}, timestamp = {Tue, 28 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SmithCKG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SomepalliSSH21, author = {Gowthami Somepalli and Sarthak Sahoo and Arashdeep Singh and Sridhar Hannenhalli}, title = {Prioritizing and characterizing functionally relevant genes across human tissues}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009194}, doi = {10.1371/JOURNAL.PCBI.1009194}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SomepalliSSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SommerS21, author = {Markus J. Sommer and Steven L. Salzberg}, title = {Balrog: {A} universal protein model for prokaryotic gene prediction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008727}, doi = {10.1371/JOURNAL.PCBI.1008727}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SommerS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SonesonSPS21, author = {Charlotte Soneson and Avi Srivastava and Rob Patro and Michael B. Stadler}, title = {Preprocessing choices affect {RNA} velocity results for droplet scRNA-seq data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008585}, doi = {10.1371/JOURNAL.PCBI.1008585}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SonesonSPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SongHK21, author = {Yun Min Song and Hyukpyo Hong and Jae Kyoung Kim}, title = {Universally valid reduction of multiscale stochastic biochemical systems using simple non-elementary propensities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008952}, doi = {10.1371/JOURNAL.PCBI.1008952}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SongHK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SorochynskyiDMF21, author = {Oleksandr Sorochynskyi and St{\'{e}}phane Deny and Olivier Marre and Ulisse Ferrari}, title = {Predicting synchronous firing of large neural populations from sequential recordings}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008501}, doi = {10.1371/JOURNAL.PCBI.1008501}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SorochynskyiDMF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SostaricN21, author = {Nikolina Sostaric and Vera van Noort}, title = {Molecular dynamics shows complex interplay and long-range effects of post-translational modifications in yeast protein interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008988}, doi = {10.1371/JOURNAL.PCBI.1008988}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SostaricN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SouleRSDW21, author = {Antoine Soul{\'{e}} and Vladimir Reinharz and Roman Sarrazin{-}Gendron and Alain Denise and J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl}, title = {Finding recurrent {RNA} structural networks with fast maximal common subgraphs of edge-colored graphs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008990}, doi = {10.1371/JOURNAL.PCBI.1008990}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SouleRSDW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SoundarrajanHTR21, author = {Dharsan K. Soundarrajan and Francisco J. Huizar and Ramezan Paravi Torghabeh and Trent Robinett and Jeremiah J. Zartman}, title = {From spikes to intercellular waves: Tuning intercellular calcium signaling dynamics modulates organ size control}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009543}, doi = {10.1371/JOURNAL.PCBI.1009543}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SoundarrajanHTR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21, author = {PLOS Computational Biology Staff}, title = {Correction: Dynamic metabolic adaptation can promote species coexistence in competitive microbial communities}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008721}, doi = {10.1371/JOURNAL.PCBI.1008721}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21a, author = {PLOS Computational Biology Staff}, title = {Correction: Up-down biphasic volume response of human red blood cells to {PIEZO1} activation during capillary transits}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008862}, doi = {10.1371/JOURNAL.PCBI.1008862}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21b, author = {PLOS Computational Biology Staff}, title = {Correction: An antigenic diversification threshold for falciparum malaria transmission at high endemicity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008945}, doi = {10.1371/JOURNAL.PCBI.1008945}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21b.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21c, author = {PLOS Computational Biology Staff}, title = {Correction: {A} new model for simultaneous dimensionality reduction and time-varying functional connectivity estimation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009112}, doi = {10.1371/JOURNAL.PCBI.1009112}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21c.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21d, author = {PLOS Computational Biology Staff}, title = {Correction: Bayesian inference and comparison of stochastic transcription elongation models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009314}, doi = {10.1371/JOURNAL.PCBI.1009314}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21d.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21e, author = {PLOS Computational Biology Staff}, title = {Correction: Inferring transmission heterogeneity using virus genealogies: Estimation and targeted prevention}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009359}, doi = {10.1371/JOURNAL.PCBI.1009359}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21e.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Staff21f, author = {PLOS Computational Biology Staff}, title = {Correction: Decentralized control of insect walking: {A} simple neural network explains a wide range of behavioral and neurophysiological results}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009362}, doi = {10.1371/JOURNAL.PCBI.1009362}, timestamp = {Mon, 24 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Staff21f.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StamateSWR21, author = {Cosmin Stamate and Joan Saez{-}Pons and David Weston and George Roussos}, title = {PDKit: {A} data science toolkit for the digital assessment of Parkinson's Disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008833}, doi = {10.1371/JOURNAL.PCBI.1008833}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StamateSWR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StefaniakB21, author = {Filip Stefaniak and Janusz M. Bujnicki}, title = {AnnapuRNA: {A} scoring function for predicting RNA-small molecule binding poses}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008309}, doi = {10.1371/JOURNAL.PCBI.1008309}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StefaniakB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StenumRR21, author = {Jan Stenum and Cristina Rossi and Ryan T. Roemmich}, title = {Two-dimensional video-based analysis of human gait using pose estimation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008935}, doi = {10.1371/JOURNAL.PCBI.1008935}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StenumRR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StepanovaBMA21, author = {Daria Stepanova and Helen M. Byrne and Philip K. Maini and Tom{\'{a}}s Alarc{\'{o}}n}, title = {A multiscale model of complex endothelial cell dynamics in early angiogenesis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008055}, doi = {10.1371/JOURNAL.PCBI.1008055}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StepanovaBMA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SterkBKRMSG21, author = {Marko Sterk and Lidija Krizancic Bombek and Masa Skelin Klemen and Marjan Slak Rupnik and Marko Marhl and Andraz Stozer and Marko Gosak}, title = {{NMDA} receptor inhibition increases, synchronizes, and stabilizes the collective pancreatic beta cell activity: Insights through multilayer network analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009002}, doi = {10.1371/JOURNAL.PCBI.1009002}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SterkBKRMSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StopardCL21, author = {Isaac J. Stopard and Thomas S. Churcher and Ben Lambert}, title = {Estimating the extrinsic incubation period of malaria using a mechanistic model of sporogony}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008658}, doi = {10.1371/JOURNAL.PCBI.1008658}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StopardCL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StoudtVM21, author = {Sara Stoudt and Valeri N. Vasquez and Ciera C. Martinez}, title = {Principles for data analysis workflows}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008770}, doi = {10.1371/JOURNAL.PCBI.1008770}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StoudtVM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/StuderTBBJS21, author = {Gabriel Studer and Gerardo Tauriello and Stefan Bienert and Marco Biasini and Niklaus Johner and Torsten Schwede}, title = {ProMod3 - {A} versatile homology modelling toolbox}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008667}, doi = {10.1371/JOURNAL.PCBI.1008667}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/StuderTBBJS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SturnioloWCMP21, author = {Simone Sturniolo and William Waites and Tim Colbourn and David Manheim and Jasmina Panovska{-}Griffiths}, title = {Testing, tracing and isolation in compartmental models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008633}, doi = {10.1371/JOURNAL.PCBI.1008633}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SturnioloWCMP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SuDW21, author = {Zhaoqian Su and Kalyani Dhusia and Yinghao Wu}, title = {A computational study of co-inhibitory immune complex assembly at the interface between {T} cells and antigen presenting cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008825}, doi = {10.1371/JOURNAL.PCBI.1008825}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SuDW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SuGBCHR21, author = {Shian Su and Quentin Gouil and Marnie E. Blewitt and Dianne Cook and Peter F. Hickey and Matthew E. Ritchie}, title = {NanoMethViz: An R/Bioconductor package for visualizing long-read methylation data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009524}, doi = {10.1371/JOURNAL.PCBI.1009524}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SuGBCHR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SubramanianPBB21, author = {Sandya Subramanian and Patrick L. Purdon and Riccardo Barbieri and Emery N. Brown}, title = {Elementary integrate-and-fire process underlies pulse amplitudes in Electrodermal activity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009099}, doi = {10.1371/JOURNAL.PCBI.1009099}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SubramanianPBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SudhaBLSHE21, author = {Govindarajan Sudha and Claudio Bassot and John Lamb and Nanjiang Shu and Yan Huang and Arne Elofsson}, title = {The evolutionary history of topological variations in the {CPA/AT} transporters}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009278}, doi = {10.1371/JOURNAL.PCBI.1009278}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SudhaBLSHE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SugimotoNNIPMKN21, author = {Ryota Sugimoto and Luca Nishimura and Phuong Thanh Nguyen and Jumpei Ito and Nicholas F. Parrish and Hiroshi Mori and Ken Kurokawa and Hirofumi Nakaoka and Ituro Inoue}, title = {Comprehensive discovery of CRISPR-targeted terminally redundant sequences in the human gut metagenome: Viruses, plasmids, and more}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009428}, doi = {10.1371/JOURNAL.PCBI.1009428}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SugimotoNNIPMKN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SukumaranHK21, author = {Jeet Sukumaran and Mark T. Holder and L. Lacey Knowles}, title = {Incorporating the speciation process into species delimitation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008924}, doi = {10.1371/JOURNAL.PCBI.1008924}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SukumaranHK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SumnerSS21, author = {Rachael L. Sumner and Meg J. Spriggs and Alexander D. Shaw}, title = {Modelling thalamocortical circuitry shows that visually induced {LTP} changes laminar connectivity in human visual cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008414}, doi = {10.1371/JOURNAL.PCBI.1008414}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SumnerSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SunN21, author = {Ruping Sun and Athanasios N. Nikolakopoulos}, title = {Elements and evolutionary determinants of genomic divergence between paired primary and metastatic tumors}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008838}, doi = {10.1371/JOURNAL.PCBI.1008838}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SunN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SunSBK21, author = {Hua{-}Chun Sun and David St{-}Amand and Curtis L. Baker Jr. and Frederick A. A. Kingdom}, title = {Visual perception of texture regularity: Conjoint measurements and a wavelet response-distribution model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008802}, doi = {10.1371/JOURNAL.PCBI.1008802}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SunSBK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SunZN21, author = {Xiaoqiang Sun and Ji Zhang and Qing Nie}, title = {Inferring latent temporal progression and regulatory networks from cross-sectional transcriptomic data of cancer samples}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008379}, doi = {10.1371/JOURNAL.PCBI.1008379}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SunZN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SundermannWRSM21, author = {Linda K. Sundermann and Jeff Wintersinger and Gunnar R{\"{a}}tsch and Jens Stoye and Quaid Morris}, title = {Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008400}, doi = {10.1371/JOURNAL.PCBI.1008400}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SundermannWRSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SusakSDRDBMEEO21, author = {Hana Susak and Laura Serra{-}Saurina and German Demidov and Raquel Rabionet and Laura Dom{\`{e}}nech and Mattia Bosio and Francesc Muyas and Xavier Estivill and Ge{\`{o}}rgia Escaram{\'{\i}}s and Stephan Ossowski}, title = {Efficient and flexible Integration of variant characteristics in rare variant association studies using integrated nested Laplace approximation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007784}, doi = {10.1371/JOURNAL.PCBI.1007784}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SusakSDRDBMEEO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SusinD21, author = {Eduarda Susin and Alain Destexhe}, title = {Integration, coincidence detection and resonance in networks of spiking neurons expressing Gamma oscillations and asynchronous states}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009416}, doi = {10.1371/JOURNAL.PCBI.1009416}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SusinD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SzaboSS21, author = {Adrienn Szab{\'{o}} and Katalin Schlett and Attila Sz{\"{u}}cs}, title = {Conventional measures of intrinsic excitability are poor estimators of neuronal activity under realistic synaptic inputs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009378}, doi = {10.1371/JOURNAL.PCBI.1009378}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SzaboSS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SzeliovaSTWHLBZ21, author = {Diana Sz{\'{e}}liov{\'{a}} and Jerneja Stor and Isabella Thiel and Marcus Weinguny and Michael Hanscho and Gabriele Lhota and Nicole Borth and J{\"{u}}rgen Zanghellini and David E. Ruckerbauer and Isabel Rocha}, title = {Inclusion of maintenance energy improves the intracellular flux predictions of {CHO}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009022}, doi = {10.1371/JOURNAL.PCBI.1009022}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/SzeliovaSTWHLBZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TabasASRBR21, author = {Alejandro Tabas and Martin Andermann and Valeria Schuberth and Helmut Riedel and Emili Balaguer{-}Ballester and Andr{\'{e}} Rupp}, title = {Correction: Modeling and {MEG} evidence of early consonance processing in auditory cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009694}, doi = {10.1371/JOURNAL.PCBI.1009694}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TabasASRBR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TabasK21, author = {Alejandro Tabas and Katharina von Kriegstein}, title = {Neural modelling of the encoding of fast frequency modulation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008787}, doi = {10.1371/JOURNAL.PCBI.1008787}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TabasK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TackenbergH21, author = {Michael C. Tackenberg and Jacob J. Hughey}, title = {The risks of using the chi-square periodogram to estimate the period of biological rhythms}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008567}, doi = {10.1371/JOURNAL.PCBI.1008567}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TackenbergH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TahirLKYKXHSPLM21, author = {Hannan Tahir and Luis Eduardo L{\'{o}}pez{-}Cort{\'{e}}s and Axel Kola and Dafna Yahav and Andr{\'{e}} Karch and Hanjue Xia and Johannes Horn and Konrad Sakowski and Monika J. Piotrowska and Leonard Leibovici and Rafael T. Mikolajczyk and Mirjam E. Kretzschmar}, title = {Relevance of intra-hospital patient movements for the spread of healthcare-associated infections within hospitals - a mathematical modeling study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008600}, doi = {10.1371/JOURNAL.PCBI.1008600}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TahirLKYKXHSPLM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TaitLSBKZG21, author = {Luke Tait and Marinho A. Lopes and George Stothart and John Baker and Nina Kazanina and Jiaxiang Zhang and Marc Goodfellow}, title = {A large-scale brain network mechanism for increased seizure propensity in Alzheimer's disease}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009252}, doi = {10.1371/JOURNAL.PCBI.1009252}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TaitLSBKZG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TaliunE21, author = {Sarah A. Gagliano Taliun and David M. Evans}, title = {Ten simple rules for conducting a mendelian randomization study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009238}, doi = {10.1371/JOURNAL.PCBI.1009238}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TaliunE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TalyanskyB21, author = {Seth Talyansky and Braden A. W. Brinkman}, title = {Dysregulation of excitatory neural firing replicates physiological and functional changes in aging visual cortex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008620}, doi = {10.1371/JOURNAL.PCBI.1008620}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TalyanskyB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TanakaKI21, author = {Hidenori Tanaka and Jason F. Kreisberg and Trey Ideker}, title = {Genetic dissection of complex traits using hierarchical biological knowledge}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009373}, doi = {10.1371/JOURNAL.PCBI.1009373}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TanakaKI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TangAWL21, author = {Yuanhong Tang and Lingling An and Quan Wang and Jian K. Liu}, title = {Regulating synchronous oscillations of cerebellar granule cells by different types of inhibition}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009163}, doi = {10.1371/JOURNAL.PCBI.1009163}, timestamp = {Tue, 14 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TangAWL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TangAYPWL21, author = {Yuanhong Tang and Lingling An and Ye Yuan and Qingqi Pei and Quan Wang and Jian K. Liu}, title = {Modulation of the dynamics of cerebellar Purkinje cells through the interaction of excitatory and inhibitory feedforward pathways}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008670}, doi = {10.1371/JOURNAL.PCBI.1008670}, timestamp = {Tue, 14 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TangAYPWL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TangherloniNCCS21, author = {Andrea Tangherloni and Marco S. Nobile and Paolo Cazzaniga and Giulia Capitoli and Simone Spolaor and Leonardo Rundo and Giancarlo Mauri and Daniela Besozzi}, title = {FiCoS: {A} fine-grained and coarse-grained GPU-powered deterministic simulator for biochemical networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009410}, doi = {10.1371/JOURNAL.PCBI.1009410}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TangherloniNCCS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TaoRCCCZEKMS21, author = {Yifeng Tao and Ashok Rajaraman and Xiaoyue Cui and Ziyi Cui and Haoran Chen and Yuanqi Zhao and Jesse Eaton and Hannah Kim and Jian Ma and Russell Schwartz}, title = {Assessing the contribution of tumor mutational phenotypes to cancer progression risk}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008777}, doi = {10.1371/JOURNAL.PCBI.1008777}, timestamp = {Mon, 29 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TaoRCCCZEKMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TavoniKB21, author = {Gaia Tavoni and David E. Chen Kersen and Vijay Balasubramanian}, title = {Cortical feedback and gating in odor discrimination and generalization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009479}, doi = {10.1371/JOURNAL.PCBI.1009479}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TavoniKB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TawaBGGMBSL21, author = {Gregory J. Tawa and John C. Braisted and David Gerhold and Gurmit Grewal and Christina Mazcko and Matthew Breen and Gurusingham Sittampalam and Amy K. LeBlanc}, title = {Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009450}, doi = {10.1371/JOURNAL.PCBI.1009450}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TawaBGGMBSL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TepekuleHKASSGK21, author = {Burcu Tepekule and Anthony Hauser and Viacheslav N. Kachalov and Sara Andresen and Thomas Scheier and Peter W. Schreiber and Huldrych F. G{\"{u}}nthard and Roger D. Kouyos}, title = {Assessing the potential impact of transmission during prolonged viral shedding on the effect of lockdown relaxation on {COVID-19}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008609}, doi = {10.1371/JOURNAL.PCBI.1008609}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TepekuleHKASSGK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TeruelMN21, author = {Nat{\'{a}}lia Teruel and Olivier Mailhot and Rafael J. Najmanovich}, title = {Modelling conformational state dynamics and its role on infection for SARS-CoV-2 Spike protein variants}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009286}, doi = {10.1371/JOURNAL.PCBI.1009286}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TeruelMN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TeseiMKWCL21, author = {Giulio Tesei and Jo{\~{a}}o M. Martins and Micha B. A. Kunze and Yong Wang and Ramon Crehuet and Kresten Lindorff{-}Larsen}, title = {DEER-PREdict: Software for efficient calculation of spin-labeling {EPR} and {NMR} data from conformational ensembles}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008551}, doi = {10.1371/JOURNAL.PCBI.1008551}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TeseiMKWCL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TewariKWMPO21, author = {Prerna Tewari and Eugene Kashdan and Cathal Walsh and Cara M. Martin and Andrew C. Parnell and John J. O'Leary}, title = {Estimating the conditional probability of developing human papilloma virus related oropharyngeal cancer by combining machine learning and inverse Bayesian modelling}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009289}, doi = {10.1371/JOURNAL.PCBI.1009289}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TewariKWMPO21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ThibodeauKETSU21, author = {Asa Thibodeau and Shubham Khetan and Alper Eroglu and Ryan Tewhey and Michael L. Stitzel and Duygu Ucar}, title = {CoRE-ATAC: {A} deep learning model for the functional classification of regulatory elements from single cell and bulk ATAC-seq data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009670}, doi = {10.1371/JOURNAL.PCBI.1009670}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ThibodeauKETSU21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ThindwaWPCOTMMK21, author = {Deus Thindwa and Nicole Wolter and Amy Pinsent and Maimuna Carrim and John Ojal and Stefano Tempia and Jocelyn Moyes and Meredith McMorrow and Jackie Kleynhans and Anne von Gottberg and Neil French and PHIRST group and Cheryl Cohen and Stefan Flasche}, title = {Estimating the contribution of HIV-infected adults to household pneumococcal transmission in South Africa, 2016-2018: {A} hidden Markov modelling study}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009680}, doi = {10.1371/JOURNAL.PCBI.1009680}, timestamp = {Tue, 08 Feb 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ThindwaWPCOTMMK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ThistlethwaiteP21, author = {Lillian R. Thistlethwaite and Varduhi Petrosyan and Xiqi Li and Marcus J. Miller and Sarah H. Elsea and Aleksandar Milosavljevic}, title = {{CTD:} An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008550}, doi = {10.1371/JOURNAL.PCBI.1008550}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ThistlethwaiteP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ThistlethwaiteP21a, author = {Lillian R. Thistlethwaite and Varduhi Petrosyan and Xiqi Li and Marcus J. Miller and Sarah H. Elsea and Aleksandar Milosavljevic}, title = {Correction: {CTD:} An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009551}, doi = {10.1371/JOURNAL.PCBI.1009551}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ThistlethwaiteP21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ThorntonFLMHOBG21, author = {Alexis M. Thornton and Lishan Fang and April Lo and Maria McSharry and David Haan and Casey O'Brien and Alice H. Berger and Marios Giannakis and Angela N. Brooks}, title = {eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009132}, doi = {10.1371/JOURNAL.PCBI.1009132}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/ThorntonFLMHOBG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TianLLZZ21, author = {Tingzhong Tian and Shuya Li and Peng Lang and Dan Zhao and Jianyang Zeng}, title = {Full-length ribosome density prediction by a multi-input and multi-output model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008842}, doi = {10.1371/JOURNAL.PCBI.1008842}, timestamp = {Wed, 02 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TianLLZZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TitusHW21, author = {Mathew Titus and George Hagstrom and James R. Watson}, title = {Unsupervised manifold learning of collective behavior}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007811}, doi = {10.1371/JOURNAL.PCBI.1007811}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TitusHW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TitzePCSMM21, author = {Ingo R. Titze and Anil Palaparthi and Karin Cox and Amanda Stark and Lynn Maxfield and Brian Manternach}, title = {Vocalization with semi-occluded airways is favorable for optimizing sound production}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008744}, doi = {10.1371/JOURNAL.PCBI.1008744}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TitzePCSMM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TjarnbergMJSCCB21, author = {Andreas Tj{\"{a}}rnberg and Omar Mahmood and Christopher A. Jackson and Giuseppe{-}Antonio Saldi and Kyunghyun Cho and Lionel A. Christiaen and Richard A. Bonneau}, title = {Optimal tuning of weighted kNN- and diffusion-based methods for denoising single cell genomics data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008569}, doi = {10.1371/JOURNAL.PCBI.1008569}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TjarnbergMJSCCB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TognonBGGP21, author = {Manuel Tognon and Vincenzo Bonnici and Erik Garrison and Rosalba Giugno and Luca Pinello}, title = {{GRAFIMO:} Variant and haplotype aware motif scanning on pangenome graphs}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009444}, doi = {10.1371/JOURNAL.PCBI.1009444}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TognonBGGP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TomaSD21, author = {Ilario De Toma and Cesar Sierra and Mara Dierssen}, title = {Meta-analysis of transcriptomic data reveals clusters of consistently deregulated gene and disease ontologies in Down syndrome}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009317}, doi = {10.1371/JOURNAL.PCBI.1009317}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TomaSD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Tomi-AndrinoNMS21, author = {Claudio Tomi{-}Andrino and Rupert Norman and Thomas Millat and Philippe Soucaille and Klaus Winzer and David A. Barrett and John R. King and Dong{-}Hyun Kim}, title = {Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth conditions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007694}, doi = {10.1371/JOURNAL.PCBI.1007694}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Tomi-AndrinoNMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TorneriLTFWH21, author = {Andrea Torneri and Pieter Libin and Gianpaolo Scalia Tomba and Christel Faes and James G. Wood and Niel Hens}, title = {On realized serial and generation intervals given control measures: The {COVID-19} pandemic case}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008892}, doi = {10.1371/JOURNAL.PCBI.1008892}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TorneriLTFWH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TorokMVMR21, author = {Justin Torok and Pedro D. Maia and Parul Verma and Christopher Mezias and Ashish Raj}, title = {Emergence of directional bias in tau deposition from axonal transport dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009258}, doi = {10.1371/JOURNAL.PCBI.1009258}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TorokMVMR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TorresOE21, author = {Felipe A. Torres and Patricio Orio and Mar{\'{\i}}a{-}Jos{\'{e}} Escobar}, title = {Selection of stimulus parameters for enhancing slow wave sleep events with a neural-field theory thalamocortical model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008758}, doi = {10.1371/JOURNAL.PCBI.1008758}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TorresOE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TosoFPPD21, author = {Alessandro Toso and Arash Fassihi and Luciano Paz and Francesca Pulecchi and Mathew E. Diamond}, title = {A sensory integration account for time perception}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008668}, doi = {10.1371/JOURNAL.PCBI.1008668}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TosoFPPD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TostevinWSG21, author = {Filipe Tostevin and Manon Wigbers and Lotte S{\o}gaard{-}Andersen and Ulrich Gerland}, title = {Four different mechanisms for switching cell polarity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008587}, doi = {10.1371/JOURNAL.PCBI.1008587}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TostevinWSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TournusEXD21, author = {Magali Tournus and Miguel Escobedo and Wei{-}Feng Xue and Marie Doumic}, title = {Insights into the dynamic trajectories of protein filament division revealed by numerical investigation into the mathematical model of pure fragmentation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008964}, doi = {10.1371/JOURNAL.PCBI.1008964}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TournusEXD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TranerBM21, author = {Michael R. Traner and Ethan S. Bromberg{-}Martin and Ilya E. Monosov}, title = {How the value of the environment controls persistence in visual search}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009662}, doi = {10.1371/JOURNAL.PCBI.1009662}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TranerBM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Trentham-DietzA21, author = {Amy Trentham{-}Dietz and Oguzhan Alag{\"{o}}z and Christina Chapman and Xuelin Huang and Jinani Jayasekera and Nicolien T. van Ravesteyn and Sandra J. Lee and Clyde B. Schechter and Jennifer M. Yeh and Sylvia K. Plevritis and Jeanne S. Mandelblatt and Breast Working Group of the Cancer Intervention and Surveillance Modeling Network (CISNET)}, title = {Reflecting on 20 years of breast cancer modeling in {CISNET:} Recommendations for future cancer systems modeling efforts}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009020}, doi = {10.1371/JOURNAL.PCBI.1009020}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Trentham-DietzA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TreveilBSGCOPMA21, author = {Agatha Treveil and Bal{\'{a}}zs Boh{\'{a}}r and Padhmanand Sudhakar and Lejla Gul and Luca Csabai and Marton Olbei and Martina Poletti and Matthew Madgwick and Tahila Andrighetti and Isabelle Hautefort and Dezs{\"{o}} M{\'{o}}dos and Tam{\'{a}}s Korcsm{\'{a}}ros}, title = {ViralLink: An integrated workflow to investigate the effect of SARS-CoV-2 on intracellular signalling and regulatory pathways}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008685}, doi = {10.1371/JOURNAL.PCBI.1008685}, timestamp = {Thu, 06 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TreveilBSGCOPMA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TrincadoRPFSYE21, author = {Juan L. Trincado and Marina Reixachs{-}Sol{\'{e}} and Judith P{\'{e}}rez{-}Granado and Tim Fugmann and Ferran Sanz and Jun Yokota and Eduardo Eyras}, title = {{ISOTOPE:} ISOform-guided prediction of epiTOPEs in cancer}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009411}, doi = {10.1371/JOURNAL.PCBI.1009411}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TrincadoRPFSYE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TrozziWVZT21, author = {Francesco Trozzi and Feng Wang and Gennady Verkhivker and Brian D. Zoltowski and Peng Tao}, title = {Dimeric allostery mechanism of the plant circadian clock photoreceptor {ZEITLUPE}}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009168}, doi = {10.1371/JOURNAL.PCBI.1009168}, timestamp = {Thu, 27 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TrozziWVZT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TsurAAPSR21, author = {Elishai Ezra Tsur and Oren Amsalem and Lea Ankri and Pritish Patil and Idan Segev and Michal Rivlin{-}Etzion}, title = {Realistic retinal modeling unravels the differential role of excitation and inhibition to starburst amacrine cells in direction selectivity}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009754}, doi = {10.1371/JOURNAL.PCBI.1009754}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TsurAAPSR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TuTLW21, author = {Yanshuai Tu and Duyan Ta and Zhonglin Lu and Yalin Wang}, title = {Topology-preserving smoothing of retinotopic maps}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009216}, doi = {10.1371/JOURNAL.PCBI.1009216}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/TuTLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TungD21, author = {Hwai{-}Ray Tung and Rick Durrett}, title = {Signatures of neutral evolution in exponentially growing tumors: {A} theoretical perspective}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008701}, doi = {10.1371/JOURNAL.PCBI.1008701}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TungD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TupikovJ21, author = {Yevhen Tupikov and Dezhe Z. Jin}, title = {Addition of new neurons and the emergence of a local neural circuit for precise timing}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008824}, doi = {10.1371/JOURNAL.PCBI.1008824}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TupikovJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TupperC21, author = {Paul F. Tupper and Caroline Colijn}, title = {{COVID-19} in schools: Mitigating classroom clusters in the context of variable transmission}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009120}, doi = {10.1371/JOURNAL.PCBI.1009120}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TupperC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TurtleRBR21, author = {James Turtle and Pete Riley and Michal Ben{-}Nun and Steven Riley}, title = {Accurate influenza forecasts using type-specific incidence data for small geographic units}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009230}, doi = {10.1371/JOURNAL.PCBI.1009230}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TurtleRBR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/TysonRNKTCSM21, author = {Adam L. Tyson and Charly V. Rousseau and Christian J. Niedworok and Sepiedeh Keshavarzi and Chryssanthi Tsitoura and Lee Cossell and Molly Strom and Troy W. Margrie}, title = {A deep learning algorithm for 3D cell detection in whole mouse brain image datasets}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009074}, doi = {10.1371/JOURNAL.PCBI.1009074}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/TysonRNKTCSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UmarovLA21, author = {Ramzan Umarov and Yu Li and Erik Arner}, title = {DeepCellState: An autoencoder-based framework for predicting cell type specific transcriptional states induced by drug treatment}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009465}, doi = {10.1371/JOURNAL.PCBI.1009465}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/UmarovLA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UmarovLATGA21, author = {Ramzan Umarov and Yu Li and Takahiro Arakawa and Satoshi Takizawa and Xin Gao and Erik Arner}, title = {ReFeaFi: Genome-wide prediction of regulatory elements driving transcription initiation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009376}, doi = {10.1371/JOURNAL.PCBI.1009376}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/UmarovLATGA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UnossonBHJF21, author = {M{\aa}ns Unosson and Marco Brancaccio and Michael Hastings and Adam M. Johansen and B{\"{a}}rbel Finkenst{\"{a}}dt}, title = {A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009698}, doi = {10.1371/JOURNAL.PCBI.1009698}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/UnossonBHJF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UnwinRFRLCWMB21, author = {H. Juliette T. Unwin and Isobel Routledge and Seth R. Flaxman and Marian{-}Andrei Rizoiu and Shengjie Lai and Justin Cohen and Daniel J. Weiss and Swapnil Mishra and Samir Bhatt}, title = {Using Hawkes Processes to model imported and local malaria cases in near-elimination settings}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008830}, doi = {10.1371/JOURNAL.PCBI.1008830}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/UnwinRFRLCWMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UrakuboYKKI21, author = {Hidetoshi Urakubo and Sho Yagishita and Haruo Kasai and Yoshiyuki Kubota and Shin Ishii}, title = {The critical balance between dopamine {D2} receptor and {RGS} for the sensitive detection of a transient decay in dopamine signal}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009364}, doi = {10.1371/JOURNAL.PCBI.1009364}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/UrakuboYKKI21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UriuT21, author = {Koichiro Uriu and Hajime Tei}, title = {Complementary phase responses via functional differentiation of dual negative feedback loops}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008774}, doi = {10.1371/JOURNAL.PCBI.1008774}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/UriuT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Ursell21, author = {Tristan Ursell}, title = {Structured environments foster competitor coexistence by manipulating interspecies interfaces}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007762}, doi = {10.1371/JOURNAL.PCBI.1007762}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Ursell21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UtgesTDMB21, author = {Javier S. Utg{\'{e}}s and Maxim I. Tsenkov and Noah J. M. Dietrich and Stuart A. MacGowan and Geoffrey J. Barton}, title = {Ankyrin repeats in context with human population variation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009335}, doi = {10.1371/JOURNAL.PCBI.1009335}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/UtgesTDMB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UzunangelovWS21, author = {Vladislav Uzunangelov and Christopher K. Wong and Joshua M. Stuart}, title = {Accurate cancer phenotype prediction with AKLIMATE, a stacked kernel learner integrating multimodal genomic data and pathway knowledge}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008878}, doi = {10.1371/JOURNAL.PCBI.1008878}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/UzunangelovWS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Valiente-Mullor21, author = {Carlos Valiente{-}Mullor and Beatriz Beamud and Iv{\'{a}}n Ansari and Carlos Franc{\'{e}}s{-}Cuesta and Neris Garc{\'{\i}}a{-}Gonz{\'{a}}lez and Lorena Mej{\'{\i}}a and Paula Ruiz{-}Hueso and Fernando Gonz{\'{a}}lez{-}Candelas}, title = {One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008678}, doi = {10.1371/JOURNAL.PCBI.1008678}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Valiente-Mullor21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ValleGS21, author = {Andr{\'{e}}s Flores Valle and Pedro J. Gon{\c{c}}alves and Johannes D. Seelig}, title = {Integration of sleep homeostasis and navigation in Drosophila}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009088}, doi = {10.1371/JOURNAL.PCBI.1009088}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ValleGS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VeithMPSLCMCDSM21, author = {Irina Veith and Arianna Mencattini and Valentin Picant and Marco Serra and Marine Leclerc and Maria Colomba Comes and Fathia Mami{-}Chouaib and Jacques Camonis and St{\'{e}}phanie Descroix and Hamasseh Shirvani and Fatima Mechta{-}Grigoriou and G{\'{e}}rard Zalcman and Maria Carla Parrini and Eugenio Martinelli}, title = {Apoptosis mapping in space and time of 3D tumor ecosystems reveals transmissibility of cytotoxic cancer death}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008870}, doi = {10.1371/JOURNAL.PCBI.1008870}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VeithMPSLCMCDSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Velasquez-Zapata21, author = {Valeria Vel{\'{a}}squez{-}Zapata and J. Mitch Elmore and Sagnik Banerjee and Karin S. Dorman and Roger P. Wise}, title = {Next-generation yeast-two-hybrid analysis with {Y2H-SCORES} identifies novel interactors of the {MLA} immune receptor}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008890}, doi = {10.1371/JOURNAL.PCBI.1008890}, timestamp = {Thu, 09 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Velasquez-Zapata21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VercruysseNS21, author = {Filip Vercruysse and Richard Naud and Henning Sprekeler}, title = {Self-organization of a doubly asynchronous irregular network state for spikes and bursts}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009478}, doi = {10.1371/JOURNAL.PCBI.1009478}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VercruysseNS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Verge-Serandour21, author = {Mathieu Le Verge{-}Serandour and Herv{\'{e}} Turlier}, title = {A hydro-osmotic coarsening theory of biological cavity formation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009333}, doi = {10.1371/JOURNAL.PCBI.1009333}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Verge-Serandour21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VerscheijdenLKM21, author = {Laurens F. M. Verscheijden and Carlijn H. C. Litjens and Jan B. Koenderink and Ron H. J. Mathijssen and Marcel M. Verbeek and Saskia N. de Wildt and Frans G. M. Russel}, title = {Physiologically based pharmacokinetic/pharmacodynamic model for the prediction of morphine brain disposition and analgesia in adults and children}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008786}, doi = {10.1371/JOURNAL.PCBI.1008786}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VerscheijdenLKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Vidaurre21, author = {Diego Vidaurre}, title = {A new model for simultaneous dimensionality reduction and time-varying functional connectivity estimation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008580}, doi = {10.1371/JOURNAL.PCBI.1008580}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Vidaurre21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VignolleSZMMD21, author = {Gabriel A. Vignolle and Denise Schaffer and Leopold Zehetner and Robert L. Mach and Astrid R. Mach{-}Aigner and Christian Derntl}, title = {FunOrder: {A} robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009372}, doi = {10.1371/JOURNAL.PCBI.1009372}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VignolleSZMMD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VillaverdeM21, author = {Alejandro Fern{\'{a}}ndez Villaverde and Gemma Massonis}, title = {On testing structural identifiability by a simple scaling method: Relying on scaling symmetries can be misleading}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009032}, doi = {10.1371/JOURNAL.PCBI.1009032}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VillaverdeM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VinkenB21, author = {Kasper Vinken and Hans P. Op de Beeck}, title = {Using deep neural networks to evaluate object vision tasks in rats}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008714}, doi = {10.1371/JOURNAL.PCBI.1008714}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VinkenB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Vo-PhamhiYG21, author = {Jenny M. Vo{-}Phamhi and Kevin A. Yamauchi and Rafael G{\'{o}}mez{-}Sj{\"{o}}berg}, title = {Validation and tuning of in situ transcriptomics image processing workflows with crowdsourced annotations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009274}, doi = {10.1371/JOURNAL.PCBI.1009274}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/Vo-PhamhiYG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/VorosKC21, author = {D{\'{a}}niel V{\"{o}}r{\"{o}}s and Bal{\'{a}}zs K{\"{o}}nny{\"{u}} and Tam{\'{a}}s Cz{\'{a}}r{\'{a}}n}, title = {Catalytic promiscuity in the {RNA} World may have aided the evolution of prebiotic metabolism}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008634}, doi = {10.1371/JOURNAL.PCBI.1008634}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/VorosKC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WagatsumaHHN21, author = {Nobuhiko Wagatsuma and Brian Hu and R{\"{u}}diger von der Heydt and Ernst Niebur}, title = {Analysis of spiking synchrony in visual cortex reveals distinct types of top-down modulation signals for spatial and object-based attention}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008829}, doi = {10.1371/JOURNAL.PCBI.1008829}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WagatsumaHHN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WalkerCVRC21, author = {Melody Walker and Karthikeyan Chandrasegaran and Cl{\'{e}}ment Vinauger and Michael A. Robert and Lauren M. Childs}, title = {Modeling the effects of Aedes aegypti's larval environment on adult body mass at emergence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009102}, doi = {10.1371/JOURNAL.PCBI.1009102}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WalkerCVRC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WalterLDGPPBJ21, author = {Jean{-}Charles Walter and Thibaut Lepage and J{\'{e}}r{\^{o}}me Dorignac and Fr{\'{e}}d{\'{e}}ric Geniet and Andrea Parmeggiani and John Palmeri and Jean{-}Yves Bouet and Ivan Junier}, title = {Supercoiled {DNA} and non-equilibrium formation of protein complexes: {A} quantitative model of the nucleoprotein ParBS partition complex}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008869}, doi = {10.1371/JOURNAL.PCBI.1008869}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WalterLDGPPBJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangDSRFH21, author = {Zhaoqiang Wang and Yichen Ding and Sandro Satta and Mehrdad Roustaei and Peng Fei and Tzung K. Hsiai}, title = {A hybrid of light-field and light-sheet imaging to study myocardial function and intracardiac blood flow during zebrafish development}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009175}, doi = {10.1371/JOURNAL.PCBI.1009175}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangDSRFH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangHPLZ21, author = {Shun Wang and Mengqian Hao and Zishu Pan and Jinzhi Lei and Xiufen Zou}, title = {Data-driven multi-scale mathematical modeling of SARS-CoV-2 infection reveals heterogeneity among {COVID-19} patients}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009587}, doi = {10.1371/JOURNAL.PCBI.1009587}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangHPLZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangHWLL21, author = {Mukuo Wang and Shujing Hou and Yu Wei and Dongmei Li and Jianping Lin}, title = {Discovery of novel dual adenosine {A1/A2A} receptor antagonists using deep learning, pharmacophore modeling and molecular docking}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008821}, doi = {10.1371/JOURNAL.PCBI.1008821}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangHWLL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangLMLH21, author = {Ning Wang and Diane Lefaudeux and Anup Mazumder and Jingyi Jessica Li and Alexander Hoffmann}, title = {Identifying the combinatorial control of signal-dependent transcription factors}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009095}, doi = {10.1371/JOURNAL.PCBI.1009095}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangLMLH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangMXBLZBCSHDC21, author = {Zifeng Wang and Aria Masoomi and Zhonghui Xu and Adel Boueiz and Sool Lee and Tingting Zhao and Russell Bowler and Michael H. Cho and Edwin K. Silverman and Craig P. Hersh and Jennifer G. Dy and Peter J. Castaldi}, title = {Improved prediction of smoking status via isoform-aware RNA-seq deep learning models}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009433}, doi = {10.1371/JOURNAL.PCBI.1009433}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangMXBLZBCSHDC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangSBP21, author = {Siwei Wang and Idan Segev and Alexander Borst and Stephanie E. Palmer}, title = {Maximally efficient prediction in the early fly visual system may support evasive flight maneuvers}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008965}, doi = {10.1371/JOURNAL.PCBI.1008965}, timestamp = {Tue, 30 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/WangSBP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangUM21, author = {Lin Wang and Vikas Upadhyay and Costas D. Maranas}, title = {dGPredictor: Automated fragmentation method for metabolic reaction free energy prediction and de novo pathway design}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009448}, doi = {10.1371/JOURNAL.PCBI.1009448}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangUM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WangYLZS21, author = {Sitong Wang and Ting Ye and Guansheng Li and Xuejiao Zhang and Huixin Shi}, title = {Margination and adhesion dynamics of tumor cells in a real microvascular network}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008746}, doi = {10.1371/JOURNAL.PCBI.1008746}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WangYLZS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WaschkeHATRHS21, author = {Johannes Waschke and Mario Hlawitschka and Kerim Anlas and Vikas Trivedi and Ingo Roeder and Jan Huisken and Nico Scherf}, title = {linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009503}, doi = {10.1371/JOURNAL.PCBI.1009503}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WaschkeHATRHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WatsonXZZSSBRSR21, author = {Gregory L. Watson and Di Xiong and Lu Zhang and Joseph A. Zoller and John Shamshoian and Phillip Sundin and Teresa Bufford and Anne W. Rimoin and Marc A. Suchard and Christina M. Ramirez}, title = {Pandemic velocity: Forecasting {COVID-19} in the {US} with a machine learning {\&} Bayesian time series compartmental model}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008837}, doi = {10.1371/JOURNAL.PCBI.1008837}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WatsonXZZSSBRSR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WeaverPWSLDS21, author = {Davis T. Weaver and Kathleen I. Pishas and Drew F. K. Williamson and Jessica Scarborough and Stephen L. Lessnick and Andrew Dhawan and Jacob G. Scott}, title = {Network potential identifies therapeutic miRNA cocktails in Ewing sarcoma}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008755}, doi = {10.1371/JOURNAL.PCBI.1008755}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WeaverPWSLDS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WeberDB21, author = {Alison I. Weber and Thomas L. Daniel and Bingni W. Brunton}, title = {Wing structure and neural encoding jointly determine sensing strategies in insect flight}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009195}, doi = {10.1371/JOURNAL.PCBI.1009195}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WeberDB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WeerasingheDBB21, author = {Gihan Weerasinghe and Benoit Duchet and Christian Bick and Rafal Bogacz}, title = {Optimal closed-loop deep brain stimulation using multiple independently controlled contacts}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009281}, doi = {10.1371/JOURNAL.PCBI.1009281}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WeerasingheDBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WeinerPMW21, author = {Benjamin G. Weiner and Andrew G. T. Pyo and Yigal Meir and Ned S. Wingreen}, title = {Motif-pattern dependence of biomolecular phase separation driven by specific interactions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009748}, doi = {10.1371/JOURNAL.PCBI.1009748}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WeinerPMW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WeinsteinGMSZSB21, author = {Ben G. Weinstein and Sarah J. Graves and Sergio Marconi and Aditya Singh and Alina Zare and Dylan Stewart and Stephanie A. Bohlman and Ethan P. White}, title = {A benchmark dataset for canopy crown detection and delineation in co-registered airborne RGB, LiDAR and hyperspectral imagery from the National Ecological Observation Network}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009180}, doi = {10.1371/JOURNAL.PCBI.1009180}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WeinsteinGMSZSB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WellsCDBARTGP21, author = {Chad R. Wells and Youfang Cao and David P. Durham and Siddappa N. Byrareddy and Aftab A. Ansari and Nancy H. Ruddle and Jeffrey P. Townsend and Alison P. Galvani and Alan S. Perelson}, title = {Mechanistic basis of post-treatment control of {SIV} after anti-{\(\alpha\)}4{\(\beta\)}7 antibody therapy}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009031}, doi = {10.1371/JOURNAL.PCBI.1009031}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/WellsCDBARTGP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WenKWS21, author = {Fu{-}Lai Wen and Chun Wai Kwan and Yu{-}Chiun Wang and Tatsuo Shibata}, title = {Autonomous epithelial folding induced by an intracellular mechano-polarity feedback loop}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009614}, doi = {10.1371/JOURNAL.PCBI.1009614}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WenKWS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WernerJ21, author = {Johannes Werner and Debora Jeske}, title = {Ten simple rules for running and managing virtual internships}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008599}, doi = {10.1371/JOURNAL.PCBI.1008599}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WernerJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WertheimPFSBH21, author = {Kenneth Y. Wertheim and Bhanwar Lal Puniya and Alyssa La Fleur and Ab Rauf Shah and Matteo Barberis and Tom{\'{a}}s Helikar}, title = {A multi-approach and multi-scale platform to model {CD4+} {T} cells responding to infections}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009209}, doi = {10.1371/JOURNAL.PCBI.1009209}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WertheimPFSBH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WesolowskiDAS21, author = {Wojciech Wesolowski and Beata Domnicz and Joanna Augustynowicz and Marek Szklarczyk}, title = {{VCF2CAPS-A} high-throughput {CAPS} marker design from {VCF} files and its test-use on a genotyping-by-sequencing {(GBS)} dataset}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008980}, doi = {10.1371/JOURNAL.PCBI.1008980}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WesolowskiDAS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WestmanPCB21, author = {Amanda M. Westman and Shayn M. Peirce and George J. Christ and Silvia S. Blemker}, title = {Agent-based model provides insight into the mechanisms behind failed regeneration following volumetric muscle loss injury}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008937}, doi = {10.1371/JOURNAL.PCBI.1008937}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WestmanPCB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WhitewayBFDBWZB21, author = {Matthew R. Whiteway and Dan Biderman and Yoni Friedman and Mario Dipoppa and Estefany Kelly Buchanan and Anqi Wu and John Zhou and Niccol{\`{o}} Bonacchi and Nathaniel J. Miska and Jean{-}Paul Noel and Erica Rodriguez and Michael Schartner and Karolina Socha and Anne E. Urai and C. Daniel Salzman and International Brain Laboratory and John P. Cunningham and Liam Paninski}, title = {Partitioning variability in animal behavioral videos using semi-supervised variational autoencoders}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009439}, doi = {10.1371/JOURNAL.PCBI.1009439}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WhitewayBFDBWZB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WhitlockJM21, author = {Alexander O. B. Whitlock and Jonathan J. Juliano and Nicole Mideo}, title = {Immune selection suppresses the emergence of drug resistance in malaria parasites but facilitates its spread}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008577}, doi = {10.1371/JOURNAL.PCBI.1008577}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WhitlockJM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WiederFPRVCLBJE21, author = {Cecilia Wieder and Cl{\'{e}}ment Frainay and Nathalie Poupin and Pablo Rodr{\'{\i}}guez{-}Mier and Florence Vinson and Juliette Cooke and Rachel P. J. Lai and Jacob G. Bundy and Fabien Jourdan and Timothy M. D. Ebbels}, title = {Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009105}, doi = {10.1371/JOURNAL.PCBI.1009105}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WiederFPRVCLBJE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WijesingheWSTMS21, author = {Lakshitha P. Wijesinghe and Melville Wohlgemuth and Richard Hau Yue So and Jochen Triesch and Cynthia F. Moss and Bertram E. Shi}, title = {Active head rolls enhance sonar-based auditory localization performance}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008973}, doi = {10.1371/JOURNAL.PCBI.1008973}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WijesingheWSTMS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WilliamsSH21, author = {Blake J. M. Williams and Guillaume St{-}Onge and Laurent H{\'{e}}bert{-}Dufresne}, title = {Localization, epidemic transitions, and unpredictability of multistrain epidemics with an underlying genotype network}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008606}, doi = {10.1371/JOURNAL.PCBI.1008606}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WilliamsSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WillsWFWJLTHPPG21, author = {Christopher Wills and Bin Wang and Shuai Fang and Yunquan Wang and Yi Jin and James A. Lutz and Jill Thompson and Kyle E. Harms and Sandeep Pulla and Bonifacio Pasion and Sara Germain and Heming Liu and Joseph Smokey and Sheng{-}Hsin Su and Nathalie Butt and Chengjin Chu and George Chuyong and Chia{-}Hao Chang{-}Yang and H. S. Dattaraja and Stuart Davies and Sisira Ediriweera and Shameema Esufali and Christine Dawn Fletcher and Nimal Gunatilleke and Savi Gunatilleke and Chang{-}Fu Hsieh and Fangliang He and Stephen Hubbell and Zhanqing Hao and Akira Itoh and David Kenfack and Buhang Li and Xiankun Li and Keping Ma and Michael Morecroft and Xiangcheng Mi and Yadvinder Malhi and Perry Ong and Lillian Jennifer Rodriguez and H. S. Suresh and I Fang Sun and Raman Sukumar and Sylvester Tan and Duncan Thomas and Mar{\'{\i}}a Uriarte and Xihua Wang and Xugao Wang and T. L. Yao and Jess Zimmermann}, title = {Interactions between all pairs of neighboring trees in 16 forests worldwide reveal details of unique ecological processes in each forest, and provide windows into their evolutionary histories}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {4}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008853}, doi = {10.1371/JOURNAL.PCBI.1008853}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WillsWFWJLTHPPG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WinkleKBOJ21, author = {James J. Winkle and Bhargav R. Karamched and Matthew R. Bennett and William Ott and Kresimir Josic}, title = {Emergent spatiotemporal population dynamics with cell-length control of synthetic microbial consortia}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009381}, doi = {10.1371/JOURNAL.PCBI.1009381}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WinkleKBOJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WinterMGCd21, author = {Mark R. Winter and Miri Morgulis and Tsvia Gildor and Andrew R. Cohen and Smadar Ben{-}Tabou de{-}Leon}, title = {Calcium-vesicles perform active diffusion in the sea urchin embryo during larval biomineralization}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008780}, doi = {10.1371/JOURNAL.PCBI.1008780}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WinterMGCd21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WoelmerBHKLMTWW21, author = {Whitney M. Woelmer and L. M. Bradley and Lisa T. Haber and David H. Klinges and Abigail S. L. Lewis and Elizabeth J. Mohr and Christa L. Torrens and Kathryn I. Wheeler and Alyssa M. Willson}, title = {Ten simple rules for training yourself in an emerging field}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009440}, doi = {10.1371/JOURNAL.PCBI.1009440}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WoelmerBHKLMTWW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WohlGL21, author = {Shirlee Wohl and John R. Giles and Justin Lessler}, title = {Sample size calculation for phylogenetic case linkage}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009182}, doi = {10.1371/JOURNAL.PCBI.1009182}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WohlGL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WongLRWSR21, author = {Thomas K. F. Wong and Teng Li and Louis Ranjard and Steven H. Wu and Jeet Sukumaran and Allen G. Rodrigo}, title = {An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008949}, doi = {10.1371/JOURNAL.PCBI.1008949}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WongLRWSR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WoodardZZ21, author = {Jaie C. Woodard and Wei Zheng and Yang Zhang}, title = {Protein structural features predict responsiveness to pharmacological chaperone treatment for three lysosomal storage disorders}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009370}, doi = {10.1371/JOURNAL.PCBI.1009370}, timestamp = {Wed, 27 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/WoodardZZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WootenZMPDLNA21, author = {David J. Wooten and Jorge G{\'{o}}mez Tejeda Za{\~{n}}udo and David Murrugarra and Austin M. Perry and Anna Dongari{-}Bagtzoglou and Reinhard C. Laubenbacher and Clarissa J. Nobile and R{\'{e}}ka Albert}, title = {Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008690}, doi = {10.1371/JOURNAL.PCBI.1008690}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WootenZMPDLNA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuBCDLM21, author = {Sean L. Wu and Jared B. Bennett and H{\'{e}}ctor M. S{\'{a}}nchez C. and Andrew J. Dolgert and Tom{\'{a}}s M. Le{\'{o}}n and John M. Marshall}, title = {MGDrivE 2: {A} simulation framework for gene drive systems incorporating seasonality and epidemiological dynamics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009030}, doi = {10.1371/JOURNAL.PCBI.1009030}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuBCDLM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuDSWS21, author = {Min Wu and Lyudmyla Dorosh and Gerold Schmitt{-}Ulms and Holger Wille and Maria Stepanova}, title = {Aggregation of A{\(\beta\)}40/42 chains in the presence of cyclic neuropeptides investigated by molecular dynamics simulations}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008771}, doi = {10.1371/JOURNAL.PCBI.1008771}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuDSWS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuKXL21, author = {Xiaoxuan Wu and Kakit Kong and Wenlei Xiao and Feng Liu}, title = {Attractive internuclear force drives the collective behavior of nuclear arrays in Drosophila embryos}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009605}, doi = {10.1371/JOURNAL.PCBI.1009605}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuKXL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuLDYW21, author = {Weimiao Wu and Yunqing Liu and Qile Dai and Xiting Yan and Zuoheng Wang}, title = {{G2S3:} {A} gene graph-based imputation method for single-cell {RNA} sequencing data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009029}, doi = {10.1371/JOURNAL.PCBI.1009029}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuLDYW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuRZTL21, author = {Ziniu Wu and Harold Rockwell and Yimeng Zhang and Shiming Tang and Tai Sing Lee}, title = {Complexity and diversity in sparse code priors improve receptive field characterization of Macaque {V1} neurons}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009528}, doi = {10.1371/JOURNAL.PCBI.1009528}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuRZTL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuX21, author = {Fandi Wu and Jinbo Xu}, title = {Deep template-based protein structure prediction}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008954}, doi = {10.1371/JOURNAL.PCBI.1008954}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuX21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/WuZ21, author = {Zhenxing Wu and Kai Zhao}, title = {Correction: Taste of time: {A} porous-medium model for human tongue surface with implications for early taste perception}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009671}, doi = {10.1371/JOURNAL.PCBI.1009671}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/WuZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XiaHPSKTKM21, author = {Hanjue Xia and Johannes Horn and Monika J. Piotrowska and Konrad Sakowski and Andr{\'{e}} Karch and Hannan Tahir and Mirjam E. Kretzschmar and Rafael T. Mikolajczyk}, title = {Effects of incomplete inter-hospital network data on the assessment of transmission dynamics of hospital-acquired infections}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008941}, doi = {10.1371/JOURNAL.PCBI.1008941}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XiaHPSKTKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XiaMEBDWC21, author = {Liyu Xia and Sarah L. Master and Maria K. Eckstein and Beth Baribault and Ronald E. Dahl and Linda Wilbrecht and Anne Gabrielle Eva Collins}, title = {Modeling changes in probabilistic reinforcement learning during adolescence}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008524}, doi = {10.1371/JOURNAL.PCBI.1008524}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/XiaMEBDWC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XiaoLY21, author = {Zhuo{-}Cheng Xiao and Kevin K. Lin and Lai{-}Sang Young}, title = {A data-informed mean-field approach to mapping of cortical parameter landscapes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009718}, doi = {10.1371/JOURNAL.PCBI.1009718}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XiaoLY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XiongJAKPLJKJZT21, author = {Zhaoping Xiong and Minji Jeon and Robert J. Allaway and Jaewoo Kang and Donghyeon Park and Jinhyuk Lee and Hwisang Jeon and Miyoung Ko and Hualiang Jiang and Mingyue Zheng and Aik Choon Tan and Xindi Guo and Multi{-}Targeting Drug DREAM Challenge Community and Kristen K. Dang and Alex Tropsha and Chana Hecht and Tirtha K. Das and Heather A. Carlson and Ruben Abagyan and Justin Guinney and Avner Schlessinger and Ross L. Cagan}, title = {Crowdsourced identification of multi-target kinase inhibitors for {RET-} and {TAU-} based disease: The Multi-Targeting Drug {DREAM} Challenge}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009302}, doi = {10.1371/JOURNAL.PCBI.1009302}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XiongJAKPLJKJZT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XuA21, author = {Zhongneng Xu and Shuichi Asakawa}, title = {A model explaining mRNA level fluctuations based on activity demands and {RNA} age}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009188}, doi = {10.1371/JOURNAL.PCBI.1009188}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XuA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XuJJ21, author = {Yang Xu and Hongmei Jiang and Wenxin Jiang}, title = {Extended graphical lasso for multiple interaction networks for high dimensional omics data}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008794}, doi = {10.1371/JOURNAL.PCBI.1008794}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XuJJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XuMLGH21, author = {He A. Xu and Alireza Modirshanechi and Marco P. Lehmann and Wulfram Gerstner and Michael H. Herzog}, title = {Novelty is not surprise: Human exploratory and adaptive behavior in sequential decision-making}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009070}, doi = {10.1371/JOURNAL.PCBI.1009070}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/XuMLGH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XuR21, author = {Xize Xu and Hermann Riecke}, title = {Paradoxical phase response of gamma rhythms facilitates their entrainment in heterogeneous networks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008575}, doi = {10.1371/JOURNAL.PCBI.1008575}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XuR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XuWG21, author = {Chang Xu and Yuxiang Wang and Gregory J. Gerling}, title = {An elasticity-curvature illusion decouples cutaneous and proprioceptive cues in active exploration of soft objects}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008848}, doi = {10.1371/JOURNAL.PCBI.1008848}, timestamp = {Wed, 20 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XuWG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/XueJRN21, author = {Bingjie Xue and Benjamin Jordan and Saqib Rizvi and Kristen M. Naegle}, title = {KinPred: {A} unified and sustainable approach for harnessing proteome-level human kinase-substrate predictions}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008681}, doi = {10.1371/JOURNAL.PCBI.1008681}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/XueJRN21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YamagishiSK21, author = {Jumpei F. Yamagishi and Nen Saito and Kunihiko Kaneko}, title = {Adaptation of metabolite leakiness leads to symbiotic chemical exchange and to a resilient microbial ecosystem}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009143}, doi = {10.1371/JOURNAL.PCBI.1009143}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/YamagishiSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YanBB21, author = {Yijia Yan and Neil Burgess and Andrej Bicanski}, title = {A model of head direction and landmark coding in complex environments}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009434}, doi = {10.1371/JOURNAL.PCBI.1009434}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YanBB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YanRLW21, author = {Huaming Yan and Daniel Ramirez{-}Guerrero and John S. Lowengrub and Min Wu}, title = {Stress generation, relaxation and size control in confined tumor growth}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009701}, doi = {10.1371/JOURNAL.PCBI.1009701}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YanRLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YangGSABZ21, author = {Yihao Yang and Howard Gritton and Martin Sarter and Sara J. Aton and Victoria Booth and Michal Zochowski}, title = {Theta-gamma coupling emerges from spatially heterogeneous cholinergic neuromodulation}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009235}, doi = {10.1371/JOURNAL.PCBI.1009235}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YangGSABZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YangSWBF21, author = {Shenghao Yang and Priyabrata Senapati and Di Wang and Chris T. Bauch and Kimon Fountoulakis}, title = {Targeted pandemic containment through identifying local contact network bottlenecks}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {8}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009351}, doi = {10.1371/JOURNAL.PCBI.1009351}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YangSWBF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YaoKC21, author = {Xiangyu Yao and Shihoko Kojima and Jing Chen}, title = {Correction: Critical role of deadenylation in regulating poly(A) rhythms and circadian gene expression}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {5}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009065}, doi = {10.1371/JOURNAL.PCBI.1009065}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YaoKC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YeoJCBCSSLSG21, author = {Grace Hui Ting Yeo and Oscar Juez and Qing Chen and Budhaditya Banerjee and Lendy Chu and Max W. Shen and May Sabry and Ive Logister and Richard I. Sherwood and David K. Gifford}, title = {Detection of gene cis-regulatory element perturbations in single-cell transcriptomes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {3}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008789}, doi = {10.1371/JOURNAL.PCBI.1008789}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YeoJCBCSSLSG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YinGTGMQP21, author = {Rui Yin and Johnathan D. Guest and Ghazaleh Taherzadeh and Ragul Gowthaman and Ipsa Mittra and Jane Quackenbush and Brian G. Pierce}, title = {Structural and energetic profiling of SARS-CoV-2 receptor binding domain antibody recognition and the impact of circulating variants}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009380}, doi = {10.1371/JOURNAL.PCBI.1009380}, timestamp = {Wed, 17 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YinGTGMQP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YirikS21, author = {Mehmet Aziz Yirik and Christoph Steinbeck}, title = {Chemical graph generators}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008504}, doi = {10.1371/JOURNAL.PCBI.1008504}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YirikS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YonTMMTM21, author = {George G. Vega Yon and Duncan C. Thomas and John Morrison and Huaiyu Mi and Paul D. Thomas and Paul Marjoram}, title = {Bayesian parameter estimation for automatic annotation of gene functions using observational data and phylogenetic trees}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1007948}, doi = {10.1371/JOURNAL.PCBI.1007948}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YonTMMTM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YuWDTXSM21, author = {Guojun Yu and Yingru Wu and Zhi Duan and Catherine Tang and Haipeng Xing and Matthew D. Scharff and Thomas MacCarthy}, title = {A Bayesian model based computational analysis of the relationship between bisulfite accessible single-stranded {DNA} in chromatin and somatic hypermutation of immunoglobulin genes}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {9}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009323}, doi = {10.1371/JOURNAL.PCBI.1009323}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YuWDTXSM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YuWYXZXGL21, author = {Liang Yu and Meng Wang and Yang Yang and Fengdan Xu and Xu Zhang and Fei Xie and Lin Gao and Xiangzhi Li}, title = {Predicting therapeutic drugs for hepatocellular carcinoma based on tissue-specific pathways}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {2}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008696}, doi = {10.1371/JOURNAL.PCBI.1008696}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/YuWYXZXGL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YuanKLCY21, author = {Haokun Yuan and Sarah C. Kramer and Eric H. Y. Lau and Benjamin J. Cowling and Wan Yang}, title = {Modeling influenza seasonality in the tropics and subtropics}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {6}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009050}, doi = {10.1371/JOURNAL.PCBI.1009050}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YuanKLCY21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/YuvalIMPS21, author = {Omer Yuval and Yael Iosilevskii and Anna Meledin and Benjamin Podbilewicz and Tom Shemesh}, title = {Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {7}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009185}, doi = {10.1371/JOURNAL.PCBI.1009185}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/YuvalIMPS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ZaffaroniRMCB21, author = {Marta Zaffaroni and Loup Rimbaud and Ludovic Mailleret and Nik J. Cunniffe and Daniele Bevacqua}, title = {Modelling interference between vectors of non-persistently transmitted plant viruses to identify effective control strategies}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {12}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009727}, doi = {10.1371/JOURNAL.PCBI.1009727}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ZaffaroniRMCB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ZamberlettiSOBG21, author = {Patrizia Zamberletti and Khadija Sabir and Thomas Opitz and Olivier Bonnefon and Edith Gabriel and Julien Papa{\"{\i}}x}, title = {More pests but less pesticide applications: Ambivalent effect of landscape complexity on conservation biological control}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {11}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009559}, doi = {10.1371/JOURNAL.PCBI.1009559}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ZamberlettiSOBG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ZarnitsynaAAMZM21, author = {Veronika Zarnitsyna and Rama S. Akondy and Hasan Ahmed and Donald J. McGuire and Vladimir G. Zarnitsyn and Mia Moore and Philip L. F. Johnson and Rafi Ahmed and Kelvin W. Li and Marc K. Hellerstein and Rustom Antia}, title = {Dynamics and turnover of memory {CD8} {T} cell responses following yellow fever vaccination}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009468}, doi = {10.1371/JOURNAL.PCBI.1009468}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ZarnitsynaAAMZM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/ZayatsPJJDS21, author = {Vasilina Zayats and Agata P. Perlinska and Aleksandra I. Jarmolinska and Borys Jastrzebski and Stanislaw Dunin{-}Horkawicz and Joanna I. Sulkowska}, title = {Slipknotted and unknotted monovalent cation-proton antiporters evolved from a common ancestor}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {10}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1009502}, doi = {10.1371/JOURNAL.PCBI.1009502}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/ZayatsPJJDS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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