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@article{DBLP:journals/candc/RedouaneHECMBR23,
  author       = {Salaheddine Redouane and
                  Houda Harmak and
                  Zouhair Elkarhat and
                  Hicham Charoute and
                  Abderrahim Malki and
                  Abdelhamid Barakat and
                  Hassan Rouba},
  title        = {Exploring the impact of \emph{CYP11A1}'s missense SNPs on the interaction
                  between {CYP11A1} and cholesterol: {A} comprehensive structural analysis
                  and {MD} simulation study},
  journal      = {Comput. Biol. Chem.},
  volume       = {106},
  pages        = {107937},
  year         = {2023}
}
@article{DBLP:journals/jbi/VivekFTG23,
  author       = {Sithara Vivek and
                  Jessica Faul and
                  Bharat Thyagarajan and
                  Weihua Guan},
  title        = {Explainable variational autoencoder {(E-VAE)} model using genome-wide
                  SNPs to predict dementia},
  journal      = {J. Biomed. Informatics},
  volume       = {148},
  pages        = {104536},
  year         = {2023}
}
@article{DBLP:journals/bioinformatics/ManfrediSMC22,
  author       = {Matteo Manfredi and
                  Castrense Savojardo and
                  Pier Luigi Martelli and
                  Rita Casadio},
  title        = {E-SNPs{\&}GO: embedding of protein sequence and function improves
                  the annotation of human pathogenic variants},
  journal      = {Bioinform.},
  volume       = {38},
  number       = {23},
  pages        = {5168--5174},
  year         = {2022}
}
@article{DBLP:journals/nar/BoytsovAAKBKAKY22,
  author       = {Alexandr Boytsov and
                  Sergey Abramov and
                  Ariuna Z. Aiusheeva and
                  Alexandra M. Kasianova and
                  Eugene Baulin and
                  Ivan A. Kuznetsov and
                  Yurii S. Aulchenko and
                  Semyon Kolmykov and
                  Ivan S. Yevshin and
                  Fedor A. Kolpakov and
                  Ilya E. Vorontsov and
                  Vsevolod J. Makeev and
                  Ivan V. Kulakovskiy},
  title        = {{ANANASTRA:} annotation and enrichment analysis of allele-specific
                  transcription factor binding at SNPs},
  journal      = {Nucleic Acids Res.},
  volume       = {50},
  number       = {{W1}},
  pages        = {51--56},
  year         = {2022}
}
@article{DBLP:journals/sensors/Tamiya22,
  author       = {Eiichi Tamiya},
  title        = {Portable Electrochemical {DNA} Sensors Based on Gene Amplification
                  Reactions to Screen and Identify Pathogen and SNPs},
  journal      = {Sensors},
  volume       = {22},
  number       = {5},
  pages        = {1865},
  year         = {2022}
}
@inproceedings{DBLP:conf/cibcb/MahmoodiMMKSLB22,
  author       = {Evanjelin Mahmoodi and
                  Anthony M. Musolf and
                  James D. Malley and
                  Daniel S. Kiser and
                  Dwight Stambolian and
                  Qing Li and
                  Joan E. Bailey{-}Wilson},
  title        = {Entanglement Mapping: {A} Novel Method to Detect Interacting SNPs
                  in Genome-Wide Studies},
  booktitle    = {{CIBCB}},
  pages        = {1--10},
  publisher    = {{IEEE}},
  year         = {2022}
}
@article{DBLP:journals/bioinformatics/TaylorAMCF21,
  author       = {Kimberly E. Taylor and
                  K. Mark Ansel and
                  Alexander Marson and
                  Lindsey A. Criswell and
                  Kyle Kai{-}How Farh},
  title        = {{PICS2:} next-generation fine mapping via probabilistic identification
                  of causal SNPs},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {18},
  pages        = {3004--3007},
  year         = {2021}
}
@article{DBLP:journals/candc/AftabiRZAAKSKMF21,
  author       = {Younes Aftabi and
                  Saleh Rafei and
                  Habib Zarredar and
                  Amir Amiri{-}Sadeghan and
                  Mohsen Akbari{-}Shahpar and
                  Zahra Khoshkam and
                  Ensiyeh Seyedrezazadeh and
                  Majid Khalili and
                  Faramarz Mehrnejad and
                  Sasan Fereidouni and
                  B. Paige Lawrence},
  title        = {Refinement of coding SNPs in the human aryl hydrocarbon receptor gene
                  using ISNPranker: An integrative-SNP ranking web-tool},
  journal      = {Comput. Biol. Chem.},
  volume       = {90},
  pages        = {107416},
  year         = {2021}
}
@article{DBLP:journals/tcbb/YilmazTC21,
  author       = {Serhan Yilmaz and
                  {\"{O}}znur Tastan and
                  A. Erc{\"{u}}ment {\c{C}}i{\c{c}}ek},
  title        = {{SPADIS:} An Algorithm for Selecting Predictive and Diverse SNPs in
                  {GWAS}},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {18},
  number       = {3},
  pages        = {1208--1216},
  year         = {2021}
}
@article{DBLP:journals/candc/SrinivasanNR20,
  author       = {E. Srinivasan and
                  Nandhini Natarajan and
                  R. Rajasekaran},
  title        = {{TTRMDB:} {A} database for structural and functional analysis on the
                  impact of SNPs over transthyretin {(TTR)} using bioinformatic tools},
  journal      = {Comput. Biol. Chem.},
  volume       = {87},
  pages        = {107290},
  year         = {2020}
}
@inproceedings{DBLP:conf/ssci/QuTM20,
  author       = {Yue Qu and
                  Dat Tran and
                  Elisa Mart{\'{\i}}nez Marroqu{\'{\i}}n},
  title        = {Biogeographical Ancestry Inference from Genotype: {A} Comparison of
                  Ancestral Informative SNPs and Genome-wide SNPs},
  booktitle    = {{SSCI}},
  pages        = {64--70},
  publisher    = {{IEEE}},
  year         = {2020}
}
@article{DBLP:journals/jetai/LasherasGRCPT19,
  author       = {Juan Enrique S{\'{a}}nchez Lasheras and
                  Sergio Luis Su{\'{a}}rez G{\'{o}}mez and
                  Jes{\'{u}}s Daniel Santos Rodr{\'{\i}}guez and
                  Gemma Casta{\~{n}}o{-}Vinyals and
                  Beatriz P{\'{e}}rez{-}G{\'{o}}mez and
                  Adonina Tard{\'{o}}n},
  title        = {A multivariate regression approach for identification of SNPs importance
                  in prostate cancer},
  journal      = {J. Exp. Theor. Artif. Intell.},
  volume       = {31},
  number       = {6},
  pages        = {817--828},
  year         = {2019}
}
@article{DBLP:journals/netmahib/SaeedHAA18,
  author       = {Noor AlHuda Ali A. H. Saeed and
                  Israa Hussein Hamzah and
                  Alaa Naseer Mohammed Ali and
                  Abdulwahab Ali Abuderman},
  title        = {Prediction of single nucleotide polymorphisms (SNPs) in apolipoprotein
                  {E} gene and their possible associations with a deleterious effect
                  on the structure and functional properties: an in silico approach},
  journal      = {Netw. Model. Anal. Health Informatics Bioinform.},
  volume       = {7},
  number       = {1},
  pages        = {16},
  year         = {2018}
}
@inproceedings{DBLP:conf/bcb/NowlingE18,
  author       = {Ronald J. Nowling and
                  Scott J. Emrich},
  title        = {Detecting Chromosomal Inversions from Dense SNPs by Combining {PCA}
                  and Association Tests},
  booktitle    = {{BCB}},
  pages        = {270--276},
  publisher    = {{ACM}},
  year         = {2018}
}
@article{DBLP:journals/bioinformatics/KorhonenPTU17,
  author       = {Janne H. Korhonen and
                  Kimmo Palin and
                  Jussi Taipale and
                  Esko Ukkonen},
  title        = {Fast motif matching revisited: high-order PWMs, SNPs and indels},
  journal      = {Bioinform.},
  volume       = {33},
  number       = {4},
  pages        = {514--521},
  year         = {2017}
}
@article{DBLP:journals/abi/HassanOKMAM16,
  author       = {Mohamed M. Hassan and
                  Shaza E. Omer and
                  Rahma M. Khalf{-}allah and
                  Razaz Y. Mustafa and
                  Isra S. Ali and
                  Sofia B. Mohamed},
  title        = {Bioinformatics Approach for Prediction of Functional Coding/Noncoding
                  Simple Polymorphisms (SNPs/Indels) in Human\emph{ BRAF} Gene},
  journal      = {Adv. Bioinformatics},
  volume       = {2016},
  pages        = {2632917:1--2632917:15},
  year         = {2016}
}
@article{DBLP:journals/candc/ErgunO16,
  author       = {Sercan Erg{\"{u}}n and
                  Serdar Oztuzcu},
  title        = {Sequence-based analysis of 5{\({'}\)}UTR and coding regions of
                  {CASP3} in terms of miRSNPs and SNPs in targetting miRNAs},
  journal      = {Comput. Biol. Chem.},
  volume       = {62},
  pages        = {70--74},
  year         = {2016}
}
@article{DBLP:journals/candc/FariasLVLO15,
  author       = {Adolfo Flores Saiffe Far{\'{\i}}as and
                  Enrique Jaime Herrera{-}L{\'{o}}pez and
                  Cristopher Jorge Moreno V{\'{a}}zquez and
                  Wentian Li and
                  Ernesto Prado Montes de Oca},
  title        = {Predicting functional regulatory SNPs in the human antimicrobial peptide
                  genes {DEFB1} and {CAMP} in tuberculosis and {HIV/AIDS}},
  journal      = {Comput. Biol. Chem.},
  volume       = {59},
  pages        = {117--125},
  year         = {2015}
}
@article{DBLP:journals/nar/EicherLSSCJLLJ15,
  author       = {John D. Eicher and
                  Christa Landowski and
                  Brian Stackhouse and
                  Arielle Sloan and
                  Wenjie Chen and
                  Nicole Jensen and
                  Ju{-}Ping Lien and
                  Richard Leslie and
                  Andrew D. Johnson},
  title        = {{GRASP} v2.0: an update on the Genome-Wide Repository of Associations
                  between SNPs and phenotypes},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Database-Issue},
  pages        = {799--804},
  year         = {2015}
}
@inproceedings{DBLP:conf/biostec/VorontsovKKNM15,
  author       = {Ilya E. Vorontsov and
                  Ivan V. Kulakovskiy and
                  Grigory Khimulya and
                  Daria D. Nikolaeva and
                  Vsevolod J. Makeev},
  title        = {{PERFECTOS-APE} - Predicting Regulatory Functional Effect of SNPs
                  by Approximate P-value Estimation},
  booktitle    = {{BIOINFORMATICS}},
  pages        = {102--108},
  publisher    = {SciTePress},
  year         = {2015}
}
@article{DBLP:journals/f1000research/DunhamKIMB15,
  author       = {Ian Dunham and
                  Eugene Kulesha and
                  Valentina Iotchkova and
                  Sandro Morganella and
                  Ewan Birney},
  title        = {{FORGE:} {A} tool to discover cell specific enrichments of {GWAS}
                  associated SNPs in regulatory regions},
  journal      = {F1000Research},
  volume       = {4},
  pages        = {18},
  year         = {2015}
}
@article{DBLP:journals/bioinformatics/DaySAS14,
  author       = {Luke Day and
                  Ouala Abdelhadi Ep Souki and
                  Andreas Alexander Albrecht and
                  Kathleen Steinh{\"{o}}fel},
  title        = {Accessibility of microRNA binding sites in metastable {RNA} secondary
                  structures in the presence of SNPs},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {3},
  pages        = {343--352},
  year         = {2014}
}
@article{DBLP:journals/candc/ErgunO14,
  author       = {Sercan Erg{\"{u}}n and
                  Serdar Oztuzcu},
  title        = {Computational analysis of 3{\({'}\)}UTR region of {CASP3} with
                  respect to miRSNPs and SNPs in targetting miRNAs},
  journal      = {Comput. Biol. Chem.},
  volume       = {53},
  pages        = {235--241},
  year         = {2014}
}
@article{DBLP:journals/candc/MarjanHRS14,
  author       = {Mojtabavi Naeini Marjan and
                  Mesrian Tanha Hamzeh and
                  Emamzadeh Rahman and
                  Vallian Sadeq},
  title        = {A computational prospect to aspirin side effects: Aspirin and {COX-1}
                  interaction analysis based on non-synonymous SNPs},
  journal      = {Comput. Biol. Chem.},
  volume       = {51},
  pages        = {57--62},
  year         = {2014}
}
@article{DBLP:journals/cmmm/MohamoudHESQMBAABA14,
  author       = {Hussein Sheikh Ali Mohamoud and
                  Muhammad Ramzan Manwar Hussain and
                  Ashraf A. El{-}Harouni and
                  Noor Ahmad Shaik and
                  Zaheer Ulhaq Qasmi and
                  Amir Feisal Merican and
                  Mukhtiar Baig and
                  Yasir Anwar and
                  Hani Asfour and
                  Nabeel Bondagji and
                  Jumana Yousuf Al{-}Aama},
  title        = {First Comprehensive \emph{In Silico} Analysis of the Functional and
                  Structural Consequences of SNPs in Human \emph{GalNAc-T1} Gene},
  journal      = {Comput. Math. Methods Medicine},
  volume       = {2014},
  pages        = {904052:1--904052:15},
  year         = {2014}
}
@article{DBLP:journals/ploscb/OzbabacanGNK14,
  author       = {Saliha Ece Acuner Ozbabacan and
                  Attila G{\"{u}}rsoy and
                  Ruth Nussinov and
                  Ozlem Keskin},
  title        = {The Structural Pathway of Interleukin 1 {(IL-1)} Initiated Signaling
                  Reveals Mechanisms of Oncogenic Mutations and SNPs in Inflammation
                  and Cancer},
  journal      = {PLoS Comput. Biol.},
  volume       = {10},
  number       = {2},
  year         = {2014}
}
@inproceedings{DBLP:conf/isda/OngCE13,
  author       = {Phaik{-}Ling Ong and
                  Yun{-}Huoy Choo and
                  Nurul A. Emran},
  title        = {Classification of SNPs for obesity analysis using FARNeM modelling},
  booktitle    = {{ISDA}},
  pages        = {265--270},
  publisher    = {{IEEE}},
  year         = {2013}
}
@article{DBLP:journals/jamia/BhavnaniBVBV12,
  author       = {Suresh K. Bhavnani and
                  Gowtham Bellala and
                  Sundar Victor and
                  Kevin E. Bassler and
                  Shyam Visweswaran},
  title        = {The role of complementary bipartite visual analytical representations
                  in the analysis of SNPs: a case study in ancestral informative markers},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {19},
  number       = {e1},
  year         = {2012}
}
@article{DBLP:journals/jamia/LiLCRLL12,
  author       = {Haiquan Li and
                  Younghee Lee and
                  James L. Chen and
                  Ellen Rebman and
                  Jianrong Li and
                  Yves A. Lussier},
  title        = {Complex-disease networks of trait-associated single-nucleotide polymorphisms
                  (SNPs) unveiled by information theory},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {19},
  number       = {2},
  pages        = {295--305},
  year         = {2012}
}
@inproceedings{DBLP:conf/amia/StokesV12,
  author       = {Matthew E. Stokes and
                  Shyam Visweswaran},
  title        = {Network Label Propagation Yields Reproducible Biomarker SNPs in Alzheimer's
                  Datasets},
  booktitle    = {{AMIA}},
  publisher    = {{AMIA}},
  year         = {2012}
}
@inproceedings{DBLP:conf/bcb/ErtenALCK12,
  author       = {Sinan Erten and
                  Marzieh Ayati and
                  Yu Liu and
                  Mark R. Chance and
                  Mehmet Koyut{\"{u}}rk},
  title        = {Algorithms for detecting complementary SNPs within a region of interest
                  that are associated with diseases},
  booktitle    = {{BCB}},
  pages        = {194--201},
  publisher    = {{ACM}},
  year         = {2012}
}
@article{DBLP:journals/jbcb/SuslovPESPK10,
  author       = {Valentin V. Suslov and
                  Petr M. Ponomarenko and
                  Vadim M. Efimov and
                  Ludmila K. Savinkova and
                  Mikhail P. Ponomarenko and
                  Nikolay A. Kolchanov},
  title        = {Snps in the {HIV-1} {TATA} Box and the Aids pandemic},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {8},
  number       = {3},
  pages        = {607--625},
  year         = {2010}
}
@article{DBLP:journals/jib/CalabriaMVMM10,
  author       = {Andrea Calabria and
                  Ettore Mosca and
                  Federica Viti and
                  Ivan Merelli and
                  Luciano Milanesi},
  title        = {SNPRanker: a tool for identification and scoring of SNPs associated
                  to target genes},
  journal      = {J. Integr. Bioinform.},
  volume       = {7},
  number       = {3},
  year         = {2010}
}
@article{DBLP:journals/nar/SacconeBTQMDTR10,
  author       = {Scott F. Saccone and
                  Raphael Bolze and
                  Prasanth Thomas and
                  Jiaxi Quan and
                  Gaurang Mehta and
                  Ewa Deelman and
                  Jay A. Tischfield and
                  John R. Rice},
  title        = {{SPOT:} a web-based tool for using biological databases to prioritize
                  SNPs after a genome-wide association study},
  journal      = {Nucleic Acids Res.},
  volume       = {38},
  number       = {Web-Server-Issue},
  pages        = {201--209},
  year         = {2010}
}
@article{DBLP:journals/biodatamining/BushCTR09,
  author       = {William S. Bush and
                  Guanhua Chen and
                  Eric Torstenson and
                  Marylyn D. Ritchie},
  title        = {LD-Spline: Mapping SNPs on genotyping platforms to genomic regions
                  using patterns of linkage disequilibrium},
  journal      = {BioData Min.},
  volume       = {2},
  pages        = {7},
  year         = {2009}
}
@article{DBLP:journals/bioinformatics/HoltTLNDWP09,
  author       = {Kathryn E. Holt and
                  Yik Y. Teo and
                  Heng Li and
                  Satheesh Nair and
                  Gordon Dougan and
                  John Wain and
                  Julian Parkhill},
  title        = {Detecting SNPs and estimating allele frequencies in clonal bacterial
                  populations by sequencing pooled {DNA}},
  journal      = {Bioinform.},
  volume       = {25},
  number       = {16},
  pages        = {2074--2075},
  year         = {2009}
}
@article{DBLP:journals/bmcbi/LawrenceDMBCZ09,
  author       = {Robert Lawrence and
                  Aaron G. Day{-}Williams and
                  Richard Mott and
                  John Broxholme and
                  Lon R. Cardon and
                  Eleftheria Zeggini},
  title        = {{GLIDERS} - {A} web-based search engine for genome-wide linkage disequilibrium
                  between HapMap SNPs},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  pages        = {367},
  year         = {2009}
}
@article{DBLP:journals/bioinformatics/JohnsonHPNOB08,
  author       = {Andrew D. Johnson and
                  Robert E. Handsaker and
                  Sara L. Pulit and
                  Marcia M. Nizzari and
                  Christopher J. O'Donnell and
                  Paul I. W. de Bakker},
  title        = {{SNAP:} a web-based tool for identification and annotation of proxy
                  SNPs using HapMap},
  journal      = {Bioinform.},
  volume       = {24},
  number       = {24},
  pages        = {2938--2939},
  year         = {2008}
}
@article{DBLP:journals/bioinformatics/SchwarzHEZBM08,
  author       = {Daniel F. Schwarz and
                  Oliver H{\"{a}}dicke and
                  Jeanette Erdmann and
                  Andreas Ziegler and
                  Daniel Bayer and
                  Steffen M{\"{o}}ller},
  title        = {SNPtoGO: characterizing SNPs by enriched {GO} terms},
  journal      = {Bioinform.},
  volume       = {24},
  number       = {1},
  pages        = {146--148},
  year         = {2008}
}
@article{DBLP:journals/bioinformatics/SongKGWT07,
  author       = {Young C. Song and
                  Edward A. Kawas and
                  Benjamin M. Good and
                  Mark D. Wilkinson and
                  Scott J. Tebbutt},
  title        = {DataBiNS: a BioMoby-based data-mining workflow for biological pathways
                  and non-synonymous SNPs},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {6},
  pages        = {780--782},
  year         = {2007}
}
@article{DBLP:journals/bmcbi/BurkeWPCSTB07,
  author       = {David F. Burke and
                  Catherine L. Worth and
                  Eva{-}Maria Priego and
                  Tammy M. K. Cheng and
                  Luc J. Smink and
                  John A. Todd and
                  Tom L. Blundell},
  title        = {Genome bioinformatic analysis of nonsynonymous SNPs},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  year         = {2007}
}
@article{DBLP:journals/ijbra/EbbertBOCM07,
  author       = {Mark T. W. Ebbert and
                  Wesley A. Beckstead and
                  Timothy O'Connor and
                  Mark J. Clement and
                  David A. McClellan},
  title        = {Pharmacogenomics: analysing SNPs in the {CYP2D6} gene using amino
                  acid properties},
  journal      = {Int. J. Bioinform. Res. Appl.},
  volume       = {3},
  number       = {4},
  pages        = {471--479},
  year         = {2007}
}
@article{DBLP:journals/bioinformatics/SoleGVIM06,
  author       = {Xavier Sol{\'{e}} and
                  Elisabet Guin{\'{o}} and
                  Joan Valls and
                  Raquel Iniesta and
                  V{\'{\i}}ctor Moreno},
  title        = {SNPStats: a web tool for the analysis of association studies},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {15},
  pages        = {1928--1929},
  year         = {2006}
}
@article{DBLP:journals/bmcbi/YueMM06,
  author       = {Peng Yue and
                  Eugene Melamud and
                  John Moult},
  title        = {SNPs3D: Candidate gene and {SNP} selection for association studies},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {166},
  year         = {2006}
}
@inproceedings{DBLP:conf/psb/BakkerGAHH06,
  author       = {Paul I. W. de Bakker and
                  Robert R. Graham and
                  David Altshuler and
                  Brian E. Henderson and
                  Christopher A. Haiman},
  title        = {Transferability of Tag SNPs to Capture Common Genetic Variation in
                  {DNA} Repair Genes Across Multiple Populations},
  booktitle    = {Pacific Symposium on Biocomputing},
  pages        = {478--486},
  publisher    = {World Scientific},
  year         = {2006}
}
@article{DBLP:journals/bioinformatics/DiMWHLDBHCYSKKMJC05,
  author       = {Xiaojun Di and
                  Hajime Matsuzaki and
                  Teresa A. Webster and
                  Earl Hubbell and
                  Guoying Liu and
                  Shoulian Dong and
                  Dan Bartell and
                  Jing Huang and
                  Richard Chiles and
                  Geoffrey Yang and
                  Mei{-}mei Shen and
                  David Kulp and
                  Giulia C. Kennedy and
                  Rui Mei and
                  Keith W. Jones and
                  Simon Cawley},
  title        = {Dynamic model based algorithms for screening and genotyping over 100K
                  SNPs on oligonucleotide microarrays},
  journal      = {Bioinform.},
  volume       = {21},
  number       = {9},
  pages        = {1958--1963},
  year         = {2005}
}
@article{DBLP:journals/bioinformatics/KarchinDKTPEHS05,
  author       = {Rachel Karchin and
                  Mark Diekhans and
                  Libusha Kelly and
                  Daryl J. Thomas and
                  Ursula Pieper and
                  Narayanan Eswar and
                  David Haussler and
                  Andrej Sali},
  title        = {{LS-SNP:} large-scale annotation of coding non-synonymous SNPs based
                  on multiple information sources},
  journal      = {Bioinform.},
  volume       = {21},
  number       = {12},
  pages        = {2814--2820},
  year         = {2005}
}
@article{DBLP:journals/bioinformatics/XuGHSPVZH05,
  author       = {Hong Xu and
                  Simon G. Gregory and
                  Elizabeth R. Hauser and
                  Judith E. Stenger and
                  Margaret A. Pericak{-}Vance and
                  Jeffery M. Vance and
                  Stephan Z{\"{u}}chner and
                  Michael A. Hauser},
  title        = {SNPselector: a web tool for selecting SNPs for genetic association
                  studies},
  journal      = {Bioinform.},
  volume       = {21},
  number       = {22},
  pages        = {4181--4186},
  year         = {2005}
}
@article{DBLP:journals/nar/SavageBELLLMBSE05,
  author       = {David Savage and
                  Jacqueline Batley and
                  Timothy A. Erwin and
                  Erica Logan and
                  Christopher G. Love and
                  Geraldine A. C. Lim and
                  Emmanuel Mongin and
                  Gary Barker and
                  German C. Spangenberg and
                  David Edwards},
  title        = {SNPServer: a real-time {SNP} discovery tool},
  journal      = {Nucleic Acids Res.},
  volume       = {33},
  number       = {Web-Server-Issue},
  pages        = {493--495},
  year         = {2005}
}
@inproceedings{DBLP:conf/csb/LinCHCG04,
  author       = {Eugene Lin and
                  Dennis Chen and
                  Yuchi Hwang and
                  Ashely Chang and
                  Z. John Gu},
  title        = {A Prediction Model for the Drug Efficacy of Interferon in {CHC} Patients
                  Based on SNPs},
  booktitle    = {{CSB}},
  pages        = {658--659},
  publisher    = {{IEEE} Computer Society},
  year         = {2004}
}
@inproceedings{DBLP:conf/icpads/SongLHGLZZCZ04,
  author       = {Justin J. Song and
                  Eric Q. Li and
                  Wei Hu and
                  Steven Ge and
                  Chunrong Lai and
                  Yimin Zhang and
                  Xuegong Zhang and
                  Wenguang Chen and
                  Weimin Zheng},
  title        = {Parallelization of Bayesian Network based SNPs Pattern Analysis and
                  Performance Characterization on {SMP/HT}},
  booktitle    = {{ICPADS}},
  pages        = {315--322},
  publisher    = {{IEEE} Computer Society},
  year         = {2004}
}
@inproceedings{DBLP:conf/recomb/ClarkDA02,
  author       = {Andrew G. Clark and
                  Emmanouil T. Dermitzakis and
                  Stylianos E. Antonarakis},
  title        = {Trisomic Phase Inference},
  booktitle    = {Computational Methods for SNPs and Haplotype Inference},
  series       = {Lecture Notes in Computer Science},
  volume       = {2983},
  pages        = {1--8},
  publisher    = {Springer},
  year         = {2002}
}
@inproceedings{DBLP:conf/recomb/HalldorssonBELYI02,
  author       = {Bjarni V. Halld{\'{o}}rsson and
                  Vineet Bafna and
                  Nathan Edwards and
                  Ross Lippert and
                  Shibu Yooseph and
                  Sorin Istrail},
  title        = {A Survey of Computational Methods for Determining Haplotypes},
  booktitle    = {Computational Methods for SNPs and Haplotype Inference},
  series       = {Lecture Notes in Computer Science},
  volume       = {2983},
  pages        = {26--47},
  publisher    = {Springer},
  year         = {2002}
}
@inproceedings{DBLP:conf/recomb/ThompsonC02,
  author       = {E. A. Thompson and
                  Nicola H. Chapman},
  title        = {Haplotype Blocks in Small Populations},
  booktitle    = {Computational Methods for SNPs and Haplotype Inference},
  series       = {Lecture Notes in Computer Science},
  volume       = {2983},
  pages        = {74--83},
  publisher    = {Springer},
  year         = {2002}
}
@inproceedings{DBLP:conf/gcb/PonomarenkoMOFGP01,
  author       = {Julia V. Ponomarenko and
                  Tatyana I. Merkulova and
                  Galina Orlova and
                  Oleg N. Fokin and
                  Elena Gorshkova and
                  Mikhail P. Ponomarenko},
  title        = {Mining SNPs for Associating Disease Penetration with Transcription
                  Factor Binding Site Alterations},
  booktitle    = {German Conference on Bioinformatics},
  pages        = {112--117},
  publisher    = {German Research Center for Biotechnology},
  year         = {2001}
}
@article{DBLP:journals/bioinformatics/SempleMPE00,
  author       = {C. A. M. Semple and
                  S. W. Morris and
                  David J. Porteous and
                  Kathryn L. Evans},
  title        = {In silico identification of transcripts and SNPs from a region of
                  4p linked with bipolar affective disorder},
  journal      = {Bioinform.},
  volume       = {16},
  number       = {8},
  pages        = {735--738},
  year         = {2000}
}
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