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Publication search results
found 47 matches
- 2023
- Corentin Briat, Mustafa Khammash:
Noise in Biomolecular Systems: Modeling, Analysis, and Control Implications. Annu. Rev. Control. Robotics Auton. Syst. 6: 283-311 (2023) - Jorge Emanuel Martins, Davide D'Alimonte, Joana Simões, Sara Sousa, Eduardo Esteves, Nuno Rosa, Maria José Correia, Mário Simões, Marlene Barros:
MODeLING.Vis: A Graphical User Interface Toolbox Developed for Machine Learning and Pattern Recognition of Biomolecular Data. Symmetry 15(1): 42 (2023) - 2022
- Corentin Briat, Mustafa Khammash:
Noise in Biomolecular Systems: Modeling, Analysis, and Control Implications. CoRR abs/2209.13901 (2022) - 2021
- Benoît Roux:
Computational Modeling and Simulations of Biomolecular Systems. WorldScientific 2021, ISBN 9789811232756, pp. 1-208 - Tamar Schlick, Stephanie Portillo-Ledesma:
Biomolecular modeling thrives in the age of technology. Nat. Comput. Sci. 1(5): 321-331 (2021) - Tamar Schlick, Stephanie Portillo-Ledesma:
Publisher Correction: Biomolecular modeling thrives in the age of technology. Nat. Comput. Sci. 1(11): 767 (2021) - Aakriti Upadhyay, Tuan Tran, Chinwe Ekenna:
A topology approach towards modeling activities and properties on a biomolecular surface. BIBM 2021: 157-162 - 2020
- Yutaka Hori:
Modeling and Analysis of Stochastic Reaction Kinetics in Biomolecular Systems. New Gener. Comput. 38(2): 367-377 (2020) - 2019
- Kevin Molloy, Erion Plaku, Amarda Shehu:
ROMEO: A Plug-and-play Software Platform of Robotics-inspired Algorithms for Modeling Biomolecular Structures and Motions. CoRR abs/1905.08331 (2019) - 2017
- Frédéric Cazals, Tom Dreyfus:
The structural bioinformatics library: modeling in biomolecular science and beyond. Bioinform. 33(7): 997-1004 (2017) - Marek Kochanczyk, William S. Hlavacek, Tomasz Lipniacki:
SPATKIN: a simulator for rule-based modeling of biomolecular site dynamics on surfaces. Bioinform. 33(22): 3667-3669 (2017) - Sunhwan Jo, Xi Cheng, Jumin Lee, Seonghoon Kim, Sang-Jun Park, Dhilon S. Patel, Andrew H. Beaven, Kyu Il Lee, Huan Rui, Soohyung Park, Hui Sun Lee, Benoît Roux, Alexander D. MacKerell Jr., Jeffrey B. Klauda, Yifei Qi, Wonpil Im:
CHARMM-GUI 10 years for biomolecular modeling and simulation. J. Comput. Chem. 38(15): 1114-1124 (2017) - Konstantinos Giannakis, Theodore Andronikos:
Membrane automata for modeling biomolecular processes. Nat. Comput. 16(1): 151-163 (2017) - 2016
- Ali Ayadi, Cecilia Zanni-Merk, François de Bertrand de Beuvron, Saoussen Krichen:
Logical and Semantic Modeling of Complex Biomolecular Networks. KES 2016: 475-484 - Ali Ayadi, Cecilia Zanni-Merk, François de Bertrand de Beuvron:
Understanding the Behaviour of Complex Biomolecular Networks by Combining Logical and Semantic Modeling. SWAT4LS 2016 - 2015
- G. C. P. van Zundert:
On Explorative and Integrative Modeling of Biomolecular Complexes. Utrecht University, Netherlands, 2015 - Haiyan Liu:
On statistical energy functions for biomolecular modeling and design. Quant. Biol. 3(4): 157-167 (2015) - 2014
- Benjamin Lutz, Claude Sinner, Stefan Bozic, Ivan Kondov, Alexander Schug:
Native structure-based modeling and simulation of biomolecular systems per mouse click. BMC Bioinform. 15: 292 (2014) - Liang Ding, Abdul Samad, Xingran Xue, Xiuzhen Huang, Russell L. Malmberg, Liming Cai:
Stochastic k-Tree Grammar and Its Application in Biomolecular Structure Modeling. LATA 2014: 308-322 - 2013
- Daniel R. Garalde, Christopher R. O'Donnell, Raj D. Maitra, Donald M. Wiberg, Gang Wang, William B. Dunbar:
Modeling the Biological Nanopore Instrument for Biomolecular State Estimation. IEEE Trans. Control. Syst. Technol. 21(6): 2038-2051 (2013) - Zoltán A. Tuza, Vipul Singhal, Jongmin Kim, Richard M. Murray:
An in silico modeling toolbox for rapid prototyping of circuits in a biomolecular "breadboard" system. CDC 2013: 1404-1410 - 2012
- Tong-Yng Wu:
Novel Cheminformatics Methods for Modeling Biomolecular Data in High Dimension Low Sample Size (HDLSS) Chemistry Space. University of North Carolina, Chapel Hill, USA, 2012 - Ramu Anandakrishnan, Boris Aguilar, Alexey Onufriev:
H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations. Nucleic Acids Res. 40(Web-Server-Issue): 537-541 (2012) - Siavash Ghavami, Farshad Lahouti, Ali Masoudi-Nejad:
Modeling and analysis of abnormality detection in biomolecular nano-networks. Nano Commun. Networks 3(4): 229-241 (2012) - Siavash Ghavami, Farshad Lahouti, Ali Masoudi-Nejad:
Modeling and Analysis of Abnormality Detection in Biomolecular Nano-Networks. CoRR abs/1205.6752 (2012) - 2011
- Alessandra Manzin, Oriano Bottauscio, Domenico Patrizio Ansalone:
Application of the thin-shell formulation to the numerical modeling of Stern layer in biomolecular electrostatics. J. Comput. Chem. 32(14): 3105-3113 (2011) - Goutam Mukherjee, Niladri Patra, Poranjyoti Barua, Bhyravabhotla Jayaram:
A fast empirical GAFF compatible partial atomic charge assignment scheme for modeling interactions of small molecules with biomolecular targets. J. Comput. Chem. 32(5): 893-907 (2011) - Carito Guziolowski, Sylvain Blachon, Tatiana Baumuratova, Gautier Stoll, Ovidiu Radulescu, Anne Siegel:
Designing Logical Rules to Model the Response of Biomolecular Networks with Complex Interactions: An Application to Cancer Modeling. IEEE ACM Trans. Comput. Biol. Bioinform. 8(5): 1223-1234 (2011) - Tibor Kozár:
GPU Computing in Biomolecular Modeling and Nanodesign. MMCP 2011: 276-283 - 2009
- Gianluca Colombo, Daniele Merico, Zoltán Nagy, Flavio De Paoli, Marco Antoniotti, Giancarlo Mauri:
Ontological modeling at a domain interface: bridging clinical and biomolecular knowledge. Knowl. Eng. Rev. 24(3): 205-224 (2009)
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