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Ivan Merelli
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Publications
- 2023
- [j47]Ivan Merelli, Stefano Beretta, Daniela Cesana, Alessandro Gennari, Fabrizio Benedicenti, Giulio Spinozzi, Daniele Cesini, Eugenio Montini, Daniele D'Agostino, Andrea Calabria:
InCliniGene enables high-throughput and comprehensive in vivo clonal tracking toward clinical genomics data integration. Database J. Biol. Databases Curation 2023 (2023) - 2020
- [j42]Andrea Calabria, Stefano Beretta, Ivan Merelli, Giulio Spinozzi, Stefano Brasca, Yuri Pirola, Fabrizio Benedicenti, Erika Tenderini, Paola Bonizzoni, Luciano Milanesi, Eugenio Montini:
γ-TRIS: a graph-algorithm for comprehensive identification of vector genomic insertion sites. Bioinform. 36(5): 1622-1624 (2020) - 2019
- [c44]Valentina Giansanti, Mauro Castelli, Stefano Beretta, Ivan Merelli:
Comparing Deep and Machine Learning Approaches in Bioinformatics: A miRNA-Target Prediction Case Study. ICCS (3) 2019: 31-44 - [c43]Valentina Giansanti, Stefano Beretta, Daniele Cesini, Daniele D'Agostino, Ivan Merelli:
Parallel Computing in Deep Learning: Bioinformatics Case Studiesa. PDP 2019: 329-333 - 2018
- [j32]Stefano Beretta, Mauro Castelli, Luis Muñoz, Leonardo Trujillo, Yuliana Martínez, Ales Popovic, Luciano Milanesi, Ivan Merelli:
A Scalable Genetic Programming Approach to Integrate miRNA-Target Predictions: Comparing Different Parallel Implementations of M3GP. Complex. 2018: 4963139:1-4963139:13 (2018) - [j30]Stefano Beretta, Mauro Castelli, Ivo Gonçalves, Ivan Kel, Valentina Giansanti, Ivan Merelli:
Improving eQTL Analysis Using a Machine Learning Approach for Data Integration: A Logistic Model Tree Solution. J. Comput. Biol. 25(10): 1091-1105 (2018) - [c40]Valentina Giansanti, Daniele D'Agostino, Carlo Maj, Stefano Beretta, Ivan Merelli:
Computing Empirical P-Values for Estimating Gene-Gene Interactions in Genome-Wide Association Studies: A Parallel Computing Approach. PDP 2018: 406-409 - 2017
- [j29]Giulio Spinozzi, Andrea Calabria, Stefano Brasca, Stefano Beretta, Ivan Merelli, Luciano Milanesi, Eugenio Montini:
VISPA2: a scalable pipeline for high-throughput identification and annotation of vector integration sites. BMC Bioinform. 18(1): 520:1-520:12 (2017) - [c37]Stefano Beretta, Carlo Maj, Ivan Merelli:
Rank miRNA: a web tool for identifying polymorphisms altering miRNA target sites. ICCS 2017: 1125-1134 - [c34]Stefano Beretta, Lucia Morganti, Elena Corni, Andrea Ferraro, Daniele Cesini, Daniele D'Agostino, Luciano Milanesi, Ivan Merelli:
Low-Power Architectures for miRNA-Target Genome Wide Analysis. PDP 2017: 309-312 - [i4]Stefano Beretta, Mauro Castelli, Ivo Gonçalves, Ivan Merelli, Daniele Ramazzotti:
Combining Bayesian Approaches and Evolutionary Techniques for the Inference of Breast Cancer Networks. CoRR abs/1703.03041 (2017) - 2016
- [c33]Stefano Beretta, Mauro Castelli, Ivo Gonçalves, Ivan Merelli, Daniele Ramazzotti:
Combining Bayesian Approaches and Evolutionary Techniques for the Inference of Breast Cancer Networks. IJCCI (ECTA) 2016: 217-224 - [c32]Stefano Beretta, Mauro Castelli, Yuliana Martínez, Luis Muñoz, Sara Silva, Leonardo Trujillo, Luciano Milanesi, Ivan Merelli:
A Machine Learning Approach for the Integration of miRNA-Target Predictions. PDP 2016: 528-534
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