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Tomás Pluskal
Person information
- affiliation: Institute of Organic Chemistry and Biochemistry, Prague, Czech Republic
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Journal Articles
- 2023
- [j4]Timothy R. Fallon, Tereza Calounová, Martin Mokrejs, Jing-Ke Weng, Tomás Pluskal
:
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation. BMC Bioinform. 24(1): 133 (2023) - 2017
- [j3]Egon L. Willighagen
, John W. Mayfield
, Jonathan Alvarsson
, Arvid Berg, Lars Carlsson
, Nina Jeliazkova
, Stefan Kuhn
, Tomás Pluskal
, Miquel Rojas-Chertó
, Ola Spjuth
, Gilleain M. Torrance
, Chris T. A. Evelo
, Rajarshi Guha
, Christoph Steinbeck
:
The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. J. Cheminformatics 9(1): 33:1-33:19 (2017) - [j2]Egon L. Willighagen
, John W. Mayfield
, Jonathan Alvarsson
, Arvid Berg, Lars Carlsson
, Nina Jeliazkova
, Stefan Kuhn
, Tomás Pluskal
, Miquel Rojas-Chertó
, Ola Spjuth
, Gilleain M. Torrance
, Chris T. A. Evelo
, Rajarshi Guha
, Christoph Steinbeck
:
Erratum to: The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. J. Cheminformatics 9(1): 53 (2017) - 2010
- [j1]Tomás Pluskal
, Sandra Castillo
, Alejandro Villar-Briones
, Matej Oresic
:
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinform. 11: 395 (2010)
Conference and Workshop Papers
- 2024
- [c1]Anton Bushuiev, Roman Bushuiev, Petr Kouba, Anatolii Filkin, Marketa Gabrielova, Michal Gabriel, Jirí Sedlár, Tomás Pluskal, Jirí Damborský, Stanislav Mazurenko, Josef Sivic:
Learning to design protein-protein interactions with enhanced generalization. ICLR 2024
Informal and Other Publications
- 2024
- [i2]Anton Bushuiev, Roman Bushuiev, Jirí Sedlár
, Tomás Pluskal, Jirí Damborský, Stanislav Mazurenko, Josef Sivic:
Revealing data leakage in protein interaction benchmarks. CoRR abs/2404.10457 (2024) - 2023
- [i1]Anton Bushuiev, Roman Bushuiev, Anatolii Filkin, Petr Kouba, Marketa Gabrielova, Michal Gabriel, Jirí Sedlár
, Tomás Pluskal, Jirí Damborský, Stanislav Mazurenko, Josef Sivic:
Learning to design protein-protein interactions with enhanced generalization. CoRR abs/2310.18515 (2023)
Coauthor Index
![](https://dblp.dagstuhl.de/img/cog.dark.24x24.png)
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