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Theodore Alexandrov
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2020 – today
- 2020
- [j14]Katja Ovchinnikova, Lachlan Stuart, Alexander Rakhlin, Sergey I. Nikolenko
, Theodore Alexandrov:
ColocML: machine learning quantifies co-localization between mass spectrometry images. Bioinform. 36(10): 3215-3224 (2020) - [j13]Katja Ovchinnikova, Vitaly Kovalev, Lachlan Stuart, Theodore Alexandrov
:
OffsampleAI: artificial intelligence approach to recognize off-sample mass spectrometry images. BMC Bioinform. 21(1): 129 (2020)
2010 – 2019
- 2018
- [j12]Andrew Palmer
, Prasad Phapale
, Dominik Fay
, Theodore Alexandrov:
Curatr: a web application for creating, curating and sharing a mass spectral library. Bioinform. 34(8): 1436-1438 (2018) - [j11]Theodore Alexandrov, Nina Golyandina
, David M. Holloway, Alexander Shlemov, Alexander V. Spirov:
Two-Exponential Models of Gene Expression Patterns for Noisy Experimental Data. J. Comput. Biol. 25(11): 1220-1230 (2018) - 2017
- [i1]Theodore Alexandrov, Sebastian Böcker
, Pieter C. Dorrestein, Emma Schymanski
:
Computational Metabolomics: Identification, Interpretation, Imaging (Dagstuhl Seminar 17491). Dagstuhl Reports 7(12): 1-17 (2017) - 2015
- [j10]Andrew Palmer, Ekaterina Ovchinnikova, Mikael Thuné, Régis Lavigne, Blandine Guével
, Andrey Dyatlov, Olga Vitek, Charles Pineau
, Mats Borén, Theodore Alexandrov:
Using collective expert judgements to evaluate quality measures of mass spectrometry images. Bioinform. 31(12): 375-384 (2015) - 2013
- [j9]Theodore Alexandrov
, Andreas M. Bartels:
Testing for presence of known and unknown molecules in imaging mass spectrometry. Bioinform. 29(18): 2335-2342 (2013) - [j8]Theodore Alexandrov
, Philip E. Bourne:
Learning How to Run a Lab: Interviews with Principal Investigators. PLoS Comput. Biol. 9(11) (2013) - [j7]Jeroen de Ridder
, Yana Bromberg
, Magali Michaut
, Venkata P. Satagopam
, Manuel Corpas
, Geoff MacIntyre
, Theodore Alexandrov
:
The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013. PLoS Comput. Biol. 9(11) (2013) - [p1]Jan Hendrik Kobarg, Theodore Alexandrov:
Efficient Spatial Segmentation of Hyper-spectral 3D Volume Data. Algorithms from and for Nature and Life 2013: 95-103 - 2012
- [j6]Theodore Alexandrov
:
MALDI imaging mass spectrometry: statistical data analysis and current computational challenges. BMC Bioinform. 13(S-16): S11 (2012) - [j5]Dennis Trede, Jan Hendrik Kobarg, Janina Oetjen
, Herbert Thiele, Peter Maass, Theodore Alexandrov
:
On the Importance of Mathematical Methods for Analysis of MALDI-Imaging Mass Spectrometry Data. J. Integr. Bioinform. 9(1) (2012) - [j4]Dennis Trede, Theodore Alexandrov
, Chen Sagiv, Peter Maass
:
Magnification of Label Maps With a Topology-Preserving Level-Set Method. IEEE Trans. Image Process. 21(9): 4040-4053 (2012) - [c7]Alexander V. Spirov, Nina Golyandina
, David M. Holloway
, Theodore Alexandrov, Ekaterina N. Spirova, Francisco J. P. Lopes
:
Measuring Gene Expression Noise in Early Drosophila Embryos: The Highly Dynamic Compartmentalized Micro-environment of the Blastoderm Is One of the Main Sources of Noise. EvoBIO 2012: 177-188 - [c6]Ilya Chernyavsky, Theodore Alexandrov, Peter Maass
, Sergey I. Nikolenko
:
A Two-Step Soft Segmentation Procedure for MALDI Imaging Mass Spectrometry Data. GCB 2012: 39-48 - [c5]Herbert Thiele, Dennis Trede, Stefan Heldmann, Theodore Alexandrov, Bernd Fischer, Peter Maass:
3D Visualisierung von Organismen. GI-Jahrestagung 2012: 1535-1544 - 2011
- [j3]Theodore Alexandrov
, Jan Hendrik Kobarg:
Efficient spatial segmentation of large imaging mass spectrometry datasets with spatially aware clustering. Bioinform. 27(13): 230-238 (2011) - [c4]Ekaterina Ovchinnikova, Niloofar Montazeri, Theodore Alexandrov, Jerry R. Hobbs, Michael C. McCord, Rutu Mulkar-Mehta:
Abductive Reasoning with a Large Knowledge Base for Discourse Processing. IWCS 2011 - 2010
- [c3]Ekaterina Ovchinnikova, Laure Vieu, Alessandro Oltramari, Stefano Borgo, Theodore Alexandrov:
Data-Driven and Ontological Analysis of FrameNet for Natural Language Reasoning. LREC 2010
2000 – 2009
- 2009
- [j2]Theodore Alexandrov
, Jens Decker, Bart J. A. Mertens, André M. Deelder, Rob A. E. M. Tollenaar, Peter Maass
, Herbert Thiele:
Biomarker discovery in MALDI-TOF serum protein profiles using discrete wavelet transformation. Bioinform. 25(5): 643-649 (2009) - [c2]Ekaterina Ovchinnikova, Theodore Alexandrov, Tonio Wandmacher:
Automatic Acquisition of the. EMNLP 2009: 1388-1397 - [c1]Theodore Alexandrov:
Self-taught Learning for Classification of Mass Spectrometry Data: A Case Study of Colorectal Cancer. GCB 2009: 45-54 - 2008
- [j1]Theodore Alexandrov
, Nina Golyandina
, Alexander V. Spirov:
Singular Spectrum Analysis of Gene Expression Profiles of Early Drosophila embryo: Exponential-in-Distance Patterns. J. Electr. Comput. Eng. 2008 (2008)
Coauthor Index
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