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ORCIDNicole Radde
Person information
- affiliation: University of Stuttgart, Germany
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Books and Theses
- 2007
[b1]Nicole Radde:
Modeling Non-Linear Dynamic Phenomena in Biochemical Networks. University of Cologne, Germany, 2007
Journal Articles
- 2023
- [j20]Vincent Wagner, Nicole Radde
:
The impossible challenge of estimating non-existent moments of the Chemical Master Equation. Bioinform. 39(Supplement-1): 440-447 (2023) - 2022
- [j19]Vincent Wagner, Benjamin Castellaz, Marco Oesting, Nicole Radde:
Quasi-Entropy Closure: a fast and reliable approach to close the moment equations of the Chemical Master Equation. Bioinform. 38(18): 4352-4359 (2022) - 2017
- [j18]Antje Jensch, Caterina Thomaseth, Nicole Radde:
Sampling-based Bayesian approaches reveal the importance of quasi-bistable behavior in cellular decision processes on the example of the MAPK signaling pathway in PC-12 cell lines. BMC Syst. Biol. 11(1): 11:1-11:15 (2017) - 2016
- [j17]Eva-Maria Geissen, Jan Hasenauer, Stephanie Heinrich, Silke Hauf, Fabian J. Theis, Nicole Radde:
MEMO: multi-experiment mixture model analysis of censored data. Bioinform. 32(16): 2464-2472 (2016) - 2015
- [j16]Patrick Weber, Mariana Hornjik, Monilola A. Olayioye, Angelika Hausser, Nicole Radde:
A computational model of PKD and CERT interactions at the trans-Golgi network of mammalian cells. BMC Syst. Biol. 9: 9 (2015) - 2014
- [j15]Andrei Kramer, Vassilios Stathopoulos, Mark A. Girolami, Nicole Radde:
mcmc_clib-an advanced MCMC sampling package for ode models. Bioinform. 30(20): 2991-2992 (2014) - [j14]Andrei Kramer, Ben Calderhead, Nicole Radde:
Hamiltonian Monte Carlo methods for efficient parameter estimation in steady state dynamical systems. BMC Bioinform. 15: 253 (2014) - 2013
- [j13]Corinna Vehlow, Jan Hasenauer, Andrei Kramer, Andreas Raue, Sabine Hug, Jens Timmer, Nicole Radde, Fabian J. Theis, Daniel Weiskopf:
iVUN: interactive Visualization of Uncertain biochemical reaction Networks. BMC Bioinform. 14(S-19): S2 (2013) - 2012
- [j12]Patrick Weber, Andrei Kramer, Clemens Dingler, Nicole Radde:
Trajectory-oriented Bayesian experiment design versus Fisher A-optimal design: an in depth comparison study. Bioinform. 28(18): 535-541 (2012) - [j11]Nicole Radde:
Analyzing fixed points of intracellular regulation networks with interrelated feedback topology. BMC Syst. Biol. 6: 57 (2012) - 2011
- [j10]Jan Hasenauer, Steffen Waldherr, Malgorzata Doszczak, Nicole Radde, Peter Scheurich, Frank Allgöwer:
Identification of models of heterogeneous cell populations from population snapshot data. BMC Bioinform. 12: 125 (2011) - 2010
- [j9]Nicole Radde:
Fixed point characterization of biological networks with complex graph topology. Bioinform. 26(22): 2874-2880 (2010) - [j8]Nicole Radde, Nadav S. Bar, Murad Banaji:
Graphical methods for analysing feedback in biological networks - A survey. Int. J. Syst. Sci. 41(1): 35-46 (2010) - 2009
- [j7]Nadav S. Bar, Nicole Radde:
Long-term prediction of fish growth under varying ambient temperature using a multiscale dynamic model. BMC Syst. Biol. 3: 107 (2009) - [j6]Jutta Gebert, Nicole Radde, Ulrich Faigle, Julia Strösser, Andreas Burkovski:
Modeling and simulation of nitrogen regulation in Corynebacterium glutamicum. Discret. Appl. Math. 157(10): 2232-2243 (2009) - [j5]Nicole Radde, Lars Kaderali:
Inference of an oscillating model for the yeast cell cycle. Discret. Appl. Math. 157(10): 2285-2295 (2009) - [j4]Nicole Radde:
The Impact of Time Delays on the Robustness of Biological Oscillators and the Effect of Bifurcations on the Inverse Problem. EURASIP J. Bioinform. Syst. Biol. 2009 (2009) - 2008
- [j3]Nicole Radde:
The Effect of Time Scale Differences and Time Delays on the Structural Stability of oscillations in a Two-Gene Network. Adv. Complex Syst. 11(3): 471-483 (2008) - 2007
- [j2]Jutta Gebert, Nicole Radde, Gerhard-Wilhelm Weber:
Modeling gene regulatory networks with piecewise linear differential equations. Eur. J. Oper. Res. 181(3): 1148-1165 (2007) - 2006
- [j1]Nicole Radde, Jutta Gebert, Christian V. Forst:
Systematic component selection for gene-network refinement. Bioinform. 22(21): 2674-2680 (2006)
Conference and Workshop Papers
- 2012
- [c6]Corinna Vehlow, Jan Hasenauer, Andrei Kramer, Julian Heinrich, Nicole Radde, Frank Allgöwer, Daniel Weiskopf:
Uncertainty-aware visual analysis of biochemical reaction networks. BioVis 2012: 91-98 - 2010
- [c5]Steffen Waldherr, Frank Allgöwer, Nicole Radde:
Generic Bifurcations in the Dynamics of Biochemical Networks. CCA 2010: 135-141 - [c4]Andrei Kramer, Jan Hasenauer, Frank Allgöwer, Nicole Radde:
Computation of the Posterior Entropy in a Bayesian Framework for Parameter Estimation in Biological Networks. CCA 2010: 493-498 - [c3]Andrei Kramer, Nicole Radde:
Towards experimental design using a Bayesian framework for parameter identification in dynamic intracellular network models. ICCS 2010: 1645-1653 - [c2]Jan Hasenauer, Steffen Waldherr, Nicole Radde, Malgorzata Doszczak, Peter Scheurich, Frank Allgöwer:
A maximum likelihood estimator for parameter distributions in heterogeneous cell populations. ICCS 2010: 1655-1663 - 2007
- [c1]Nicole Radde, Lars Kaderali:
Bayesian Inference of Gene Regulatory Networks Using Gene Expression Time Series Data. BIRD 2007: 1-15
Parts in Books or Collections
- 2008
- [p1]Lars Kaderali, Nicole Radde:
Inferring Gene Regulatory Networks from Expression Data. Computational Intelligence in Bioinformatics 2008: 33-74
Coauthor Index
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