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Jeremy J. Yang
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2020 – today
- 2023
- [j19]Sorin I. Avram
, Thomas B. Wilson, Ramona Curpan, Liliana Halip, Ana Borota
, Alina Bora, Cristian Bologa, Jayme Holmes, Jeffrey Knockel, Jeremy J. Yang, Tudor I. Oprea
:
DrugCentral 2023 extends human clinical data and integrates veterinary drugs. Nucleic Acids Res. 51(D1): 1276-1287 (2023) - [j18]Keith J. Kelleher
, Timothy Sheils
, Stephen L. Mathias
, Jeremy J. Yang
, Vincent T. Metzger
, Vishal B. Siramshetty
, Dac-Trung Nguyen
, Lars Juhl Jensen
, Dusica Vidovic
, Stephan C. Schürer
, Jayme Holmes
, Karlie R. Sharma
, Ajay Pillai
, Cristian Bologa
, Jeremy S. Edwards
, Ewy A Mathé
, Tudor I. Oprea
:
Pharos 2023: an integrated resource for the understudied human proteome. Nucleic Acids Res. 51(D1): 1405-1416 (2023) - 2022
- [j17]Jeremy J. Yang, Christopher Gessner, Joel Duerksen, Daniel Biber, Jessica L. Binder, Murat Ozturk, Brian Foote, Robin McEntire, Kyle Stirling, Ying Ding, David J. Wild:
Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination. BMC Bioinform. 23(1): 37 (2022) - [j16]Qi Yu, Qi Wang, Yafei Zhang, Chongyan Chen, Hyeyoung Ryu, Namu Park, Jae-Eun Baek, Keyuan Li, Yifei Wu, Daifeng Li, Jian Xu, Meijun Liu, Jeremy J. Yang, Chenwei Zhang, Chao Lu, Peng Zhang, Xin Li
, Baitong Chen, Islam Akef Ebeid, Julia Fensel, Chao Min, Yujia Zhai, Min Song, Ying Ding, Yi Bu
:
Reply to issues about entitymetrics and paper-entity citation network. Scientometrics 127(4): 2127-2129 (2022) - 2021
- [j15]Jeremy J. Yang
, Dhouha Grissa
, Christophe G. Lambert
, Cristian Bologa, Stephen L. Mathias, Anna Waller
, David J. Wild, Lars Juhl Jensen
, Tudor I. Oprea
:
TIGA: target illumination GWAS analytics. Bioinform. 37(21): 3865-3873 (2021) - [j14]Sorin I. Avram
, Cristian Bologa, Jayme Holmes
, Giovanni Bocci, Thomas B. Wilson, Dac-Trung Nguyen
, Ramona Curpan, Liliana Halip
, Alina Bora, Jeremy J. Yang, Jeffrey Knockel, Suman Sirimulla, Oleg Ursu, Tudor I. Oprea
:
DrugCentral 2021 supports drug discovery and repositioning. Nucleic Acids Res. 49(Database-Issue): D1160-D1169 (2021) - [j13]Timothy Sheils
, Stephen L. Mathias, Keith J. Kelleher, Vishal B. Siramshetty, Dac-Trung Nguyen
, Cristian Bologa, Lars Juhl Jensen
, Dusica Vidovic, Amar Koleti, Stephan C. Schürer
, Anna Waller
, Jeremy J. Yang, Jayme Holmes
, Giovanni Bocci, Noel Southall
, Poorva Dharkar, Ewy A Mathé, Anton Simeonov, Tudor I. Oprea
:
TCRD and Pharos 2021: mining the human proteome for disease biology. Nucleic Acids Res. 49(Database-Issue): D1334-D1346 (2021) - [j12]Govinda B. Kc
, Giovanni Bocci
, Srijan Verma, Md Mahmudulla Hassan
, Jayme Holmes, Jeremy J. Yang, Suman Sirimulla
, Tudor I. Oprea
:
A machine learning platform to estimate anti-SARS-CoV-2 activities. Nat. Mach. Intell. 3(6): 527-535 (2021) - [j11]Qi Yu, Qi Wang, Yafei Zhang, Chongyan Chen, Hyeyoung Ryu
, Namu Park, Jae-Eun Baek, Keyuan Li, Yifei Wu, Daifeng Li, Jian Xu, Meijun Liu, Jeremy J. Yang, Chenwei Zhang
, Chao Lu, Peng Zhang, Xin Li
, Baitong Chen, Islam Akef Ebeid, Julia Fensel, Chao Min, Yujia Zhai, Min Song, Ying Ding, Yi Bu
:
Analyzing knowledge entities about COVID-19 using entitymetrics. Scientometrics 126(5): 4491-4509 (2021)
2010 – 2019
- 2019
- [j10]Zheng Gao, Gang Fu, Chunping Ouyang, Satoshi Tsutsui, Xiaozhong Liu, Jeremy J. Yang, Christopher Gessner, Brian Foote, David J. Wild, Ying Ding, Qi Yu
:
edge2vec: Representation learning using edge semantics for biomedical knowledge discovery. BMC Bioinform. 20(1): 306:1-306:15 (2019) - [j9]Oleg Ursu, Jayme Holmes
, Cristian Bologa, Jeremy J. Yang, Stephen L. Mathias, Vasileios Stathias, Dac-Trung Nguyen
, Stephan C. Schürer
, Tudor I. Oprea
:
DrugCentral 2018: an update. Nucleic Acids Res. 47(Database-Issue): D963-D970 (2019) - 2017
- [j8]Daniel Cannon, Jeremy J. Yang, Stephen L. Mathias, Oleg Ursu, Subramani Mani, Anna Waller
, Stephan C. Schürer, Lars Juhl Jensen
, Larry A. Sklar, Cristian Bologa, Tudor I. Oprea
:
TIN-X: target importance and novelty explorer. Bioinform. 33(16): 2601-2603 (2017) - [j7]Marija Djokic-Petrovic
, Vladimir M. Cvjetkovic
, Jeremy J. Yang, Marko Zivanovic
, David J. Wild:
PIBAS FedSPARQL: a web-based platform for integration and exploration of bioinformatics datasets. J. Biomed. Semant. 8(1): 42:1-42:20 (2017) - [j6]Yu Lin, Saurabh Mehta
, Hande Küçük-McGinty, John Paul Turner, Dusica Vidovic, Michele Forlin, Amar Koleti, Dac-Trung Nguyen
, Lars Juhl Jensen
, Rajarshi Guha, Stephen L. Mathias, Oleg Ursu, Vasileios Stathias, Jianbin Duan, Nooshin Nabizadeh, Caty Chung, Christopher Mader, Ubbo Visser, Jeremy J. Yang, Cristian Bologa, Tudor I. Oprea
, Stephan C. Schürer:
Drug target ontology to classify and integrate drug discovery data. J. Biomed. Semant. 8(1): 50:1-50:16 (2017) - [j5]Stuart J. Nelson, Tudor I. Oprea
, Oleg Ursu, Cristian Bologa, Amrapali Zaveri
, Jayme Holmes
, Jeremy J. Yang, Stephen L. Mathias, Subramani Mani, Mark S. Tuttle, Michel Dumontier
:
Formalizing drug indications on the road to therapeutic intent. J. Am. Medical Informatics Assoc. 24(6): 1169-1172 (2017) - [j4]Oleg Ursu, Jayme Holmes
, Jeffrey Knockel, Cristian Bologa, Jeremy J. Yang, Stephen L. Mathias, Stuart J. Nelson, Tudor I. Oprea
:
DrugCentral: online drug compendium. Nucleic Acids Res. 45(Database-Issue): D932-D939 (2017) - [j3]Dac-Trung Nguyen
, Stephen L. Mathias, Cristian Bologa, Søren Brunak
, Nicolas F. Fernandez, Anna Gaulton, Anne Hersey, Jayme Holmes
, Lars Juhl Jensen
, Anneli Karlsson, Guixia Liu, Avi Ma'ayan
, Geetha Mandava, Subramani Mani, Saurabh Mehta
, John P. Overington
, Juhee Patel, Andrew D. Rouillard
, Stephan C. Schürer, Timothy Sheils
, Anton Simeonov, Larry A. Sklar, Noel Southall
, Oleg Ursu, Dusica Vidovic, Anna Waller
, Jeremy J. Yang, Ajit Jadhav
, Tudor I. Oprea
, Rajarshi Guha:
Pharos: Collating protein information to shed light on the druggable genome. Nucleic Acids Res. 45(Database-Issue): D995-D1002 (2017) - 2016
- [j2]Jeremy J. Yang, Oleg Ursu, Christopher A. Lipinski
, Larry A. Sklar, Tudor I. Oprea
, Cristian Bologa:
Badapple: promiscuity patterns from noisy evidence. J. Cheminformatics 8(1): 29:1-29:14 (2016) - 2013
- [j1]Stephen L. Mathias, Jarrett Hines-Kay, Jeremy J. Yang, Gergely Zahoránszky-Köhalmi, Cristian Bologa
, Oleg Ursu, Tudor I. Oprea
:
The CARLSBAD Database: A Confederated Database of Chemical Bioactivities. Database J. Biol. Databases Curation 2013 (2013)
Coauthor Index
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last updated on 2024-08-03 20:16 CEST by the dblp team
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