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Craig Engstrom
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Journal Articles
- 2024
- [j8]Boyeong Woo
, Craig Engstrom, William Baresic, Jurgen Fripp
, Stuart Crozier
, Shekhar S. Chandra
:
Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative. Medical Image Anal. 93: 103089 (2024) - 2022
- [j7]Wei Dai
, Boyeong Woo
, Siyu Liu
, Matthew Marques, Craig Engstrom, Peter B. Greer, Stuart Crozier
, Jason A. Dowling
, Shekhar S. Chandra
:
CAN3D: Fast 3D medical image segmentation via compact context aggregation. Medical Image Anal. 82: 102562 (2022) - [j6]Aurelien Destruel
, Jin Jin, Ewald Weber
, Mingyan Li
, Craig Engstrom
, Feng Liu
, Stuart Crozier
:
Integrated Multi-Modal Antenna With Coupled Radiating Structures (I-MARS) for 7T pTx Body MRI. IEEE Trans. Medical Imaging 41(1): 39-51 (2022) - 2018
- [j5]Shekhar S. Chandra
, Jason A. Dowling
, Craig Engstrom
, Ying Xia
, Anthony Paproki, Ales Neubert
, David Rivest-Hénault, Olivier Salvado
, Stuart Crozier
, Jurgen Fripp
:
A lightweight rapid application development framework for biomedical image analysis. Comput. Methods Programs Biomed. 164: 193-205 (2018) - 2015
- [j4]Ales Neubert
, Jurgen Fripp
, Craig Engstrom
, Daniel Schwarz
, Marc-André Weber, Stuart Crozier
:
Statistical shape model reconstruction with sparse anomalous deformations: Application to intervertebral disc herniation. Comput. Medical Imaging Graph. 46: 11-19 (2015) - 2014
- [j3]Shekhar S. Chandra, Ying Xia
, Craig Engstrom
, Stuart Crozier
, Raphael Schwarz, Jurgen Fripp
:
Focused shape models for hip joint segmentation in 3D magnetic resonance images. Medical Image Anal. 18(3): 567-578 (2014) - 2013
- [j2]Ales Neubert
, Jurgen Fripp
, Craig Engstrom
, Duncan Walker, Marc-André Weber, Raphael Schwarz, Stuart Crozier
:
Research and applications: Three-dimensional morphological and signal intensity features for detection of intervertebral disc degeneration from magnetic resonance images. J. Am. Medical Informatics Assoc. 20(6): 1082-1090 (2013) - 2012
- [j1]Adnan Trakic
, Ewald Weber
, Bing Keong Li, Hua O. Wang, Feng Liu
, Craig Engstrom
, Stuart Crozier
:
Electromechanical Design and Construction of a Rotating Radio-Frequency Coil System for Applications in Magnetic Resonance. IEEE Trans. Biomed. Eng. 59(4): 1068-1075 (2012)
Conference and Workshop Papers
- 2023
- [c18]Siyu Liu, Jason A. Dowling, Craig Engstrom, Peter B. Greer, Stuart Crozier
, Shekhar S. Chandra
:
Manipulating Medical Image Translation with Manifold Disentanglement. DICTA 2023: 332-339 - [c17]Siyu Liu, Linfeng Liu, Craig Engstrom, Xuan Vinh To
, Zongyuan Ge, Stuart Crozier
, Fatima A. Nasrallah
, Shekhar S. Chandra
:
Style-Based Manifold for Weakly-Supervised Disease Characteristic Discovery. MICCAI (5) 2023: 368-378 - [c16]Boyeong Woo, Marlon Bran Lorenzana, Craig Engstrom, William Baresic, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra:
Semantic Segmentation of 3D Medical Images Through a Kaleidoscope: Data from the Osteoarthritis Initiative. MIDL 2023: 905-917 - 2022
- [c15]Marlon Bran Lorenzana
, Craig Engstrom, Shekhar S. Chandra
:
Transformer Compressed Sensing Via Global Image Tokens. ICIP 2022: 3011-3015 - [c14]Boyeong Woo, Craig Engstrom, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra:
Anomaly-Aware 3D Segmentation of Knee Magnetic Resonance Images. MIDL 2022: 1360-1374 - 2021
- [c13]Wei Dai, Boyeong Woo, Siyu Liu, Matthew Marques, Fangfang Tang, Stuart Crozier
, Craig Engstrom
, Shekhar Chandra
:
Can3d: Fast 3d Knee Mri Segmentation Via Compact Context Aggregation. ISBI 2021: 1505-1508 - 2020
- [c12]Matthew Marques, Craig Engstrom
, Jurgen Fripp, Stuart Crozier
, Shekhar S. Chandra
:
Fast High Dynamic Range MRI by Contrast Enhancement Networks. ISBI 2020: 1446-1449 - 2017
- [c11]Ying Xia
, José V. Manjón, Craig Engstrom
, Stuart Crozier
, Olivier Salvado, Jurgen Fripp:
Automated cartilage segmentation from 3D MR images of hip joint using an ensemble of neural networks. ISBI 2017: 1070-1073 - 2016
- [c10]Anthony Paproki, Katharine J. Wilson, Rachel K. Surowiec, Charles P. Ho, Abinash Pant, Pierrick Bourgeat
, Craig Engstrom
, Stuart Crozier
, Jurgen Fripp:
Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: Data from the osteoarthritis initiative. ISBI 2016: 424-427 - [c9]Ales Neubert
, Ibrahim Naser, Anthony Paproki, Craig Engstrom
, Jurgen Fripp, Stuart Crozier
, Shekhar S. Chandra
:
Incremental shape learning of 3D surfaces of the knee, data from the osteoarthritis initiative. ISBI 2016: 881-884 - 2015
- [c8]Ales Neubert
, Jurgen Fripp
, Shekhar S. Chandra
, Craig Engstrom
, Stuart Crozier
:
Automated Intervertebral Disc Segmentation Using Probabilistic Shape Estimation and Active Shape Models. CSI@MICCAI 2015: 150-158 - 2012
- [c7]Zhengyi Yang, Stuart Crozier
, Craig Engstrom, Raphael Schwarz, Lars Lauer, Jurgen Fripp, Shekhar Chandra
, Ying Xia
, Ales Neubert
, Olivier Salvado
, Tania Brancato
:
Morphology-Based Interslice Interpolation on Manual Segmentations of Joint Bones and Muscles in MRI. DICTA 2012: 1-8 - [c6]Shekhar Chandra
, Ying Xia
, Craig Engstrom
, Raphael Schwarz, Lars Lauer, Stuart Crozier
, Olivier Salvado
, Jurgen Fripp:
Unilateral hip joint segmentation with shape priors learned from missing data. ISBI 2012: 1711-1714 - 2011
- [c5]Ales Neubert
, Jurgen Fripp, Kai-Kai Shen
, Olivier Salvado, Raphael Schwarz, Lars Lauer, Craig Engstrom, Stuart Crozier
:
Automated 3D Segmentation of Vertebral Bodies and Intervertebral Discs from MRI. DICTA 2011: 19-24 - [c4]Ying Xia
, Shakes Chandra
, Olivier Salvado, Jurgen Fripp, Raphael Schwarz, Lars Lauer, Craig Engstrom, Stuart Crozier
:
Automated MR Hip Bone Segmentation. DICTA 2011: 25-30 - 2010
- [c3]Filip Malmberg, Ingela Nyström, Andrew Mehnert
, Craig Engstrom
, Ewert Bengtsson:
Relaxed image foresting transforms for interactive volume image segmentation. Medical Imaging: Image Processing 2010: 762340 - 2009
- [c2]Jurgen Fripp, Pierrick Bourgeat
, Craig Engstrom, Sébastien Ourselin, Stuart Crozier
, Olivier Salvado
:
Automated Segmentation of the Menisci from MR Images. ISBI 2009: 510-513 - 2008
- [c1]Valer Jurcak, Jurgen Fripp, Craig Engstrom, Duncan Walker, Olivier Salvado, Sébastien Ourselin, Stuart Crozier
:
Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region. ISBI 2008: 113-116
Informal and Other Publications
- 2023
- [i8]Wei Dai, Siyu Liu, Craig B. Engstrom, Shekhar S. Chandra:
Explainable Semantic Medical Image Segmentation with Style. CoRR abs/2303.05696 (2023) - [i7]Xinwen Liu, Jing Wang, S. Kevin Zhou, Craig Engstrom, Shekhar S. Chandra:
Evidence-aware multi-modal data fusion and its application to total knee replacement prediction. CoRR abs/2303.13810 (2023) - 2022
- [i6]Marlon Bran Lorenzana, Craig Engstrom, Feng Liu, Shekhar S. Chandra:
Transformer Compressed Sensing via Global Image Tokens. CoRR abs/2203.12861 (2022) - [i5]Siyu Liu, Linfeng Liu, Xuan Vinh, Stuart Crozier, Craig Engstrom, Fatima A. Nasrallah, Shekhar Chandra:
Structure Guided Manifolds for Discovery of Disease Characteristics. CoRR abs/2209.11015 (2022) - [i4]Boyeong Woo, Craig Engstrom, William Baresic, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra:
Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative. CoRR abs/2211.16696 (2022) - 2021
- [i3]Wei Dai, Boyeong Woo, Siyu Liu, Matthew Marques, Craig B. Engstrom, Peter B. Greer, Stuart Crozier, Jason A. Dowling, Shekhar S. Chandra:
CAN3D: Fast 3D Medical Image Segmentation via Compact Context Aggregation. CoRR abs/2109.05443 (2021) - 2020
- [i2]Siyu Liu
, Wei Dai, Craig Engstrom, Jurgen Fripp, Peter B. Greer, Stuart Crozier, Jason A. Dowling, Shekhar S. Chandra:
Fabric Image Representation Encoding Networks for Large-scale 3D Medical Image Analysis. CoRR abs/2006.15578 (2020) - [i1]Siyu Liu
, Jason A. Dowling, Craig Engstrom, Peter B. Greer, Stuart Crozier, Shekhar S. Chandra:
Manipulating Medical Image Translation with Manifold Disentanglement. CoRR abs/2011.13615 (2020)
Coauthor Index
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